Ribosomal protein-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 605 |
| AccII | CGCG | 1 cut(s) | 123 |
| AccIII | TCCGGA | 1 cut(s) | 208 |
| AciI | CCGC | 2 cut(s) | 123, 1009 |
| AclWI | GGATC | 4 cut(s) | 24, 508, 655, 959 |
| AcoI | YGGCCR | 1 cut(s) | 60 |
| AcsI | RAATTY | 3 cut(s) | 21, 469, 1079 |
| AcuI | CTGAAG | 3 cut(s) | 299, 885, 1034 |
| AfaI | GTAC | 1 cut(s) | 701 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 248, 561 |
| AflIII | ACRYGT | 1 cut(s) | 821 |
| AgeI | ACCGGT | 1 cut(s) | 950 |
| AgsI | TTSAA | 3 cut(s) | 745, 1067, 1085 |
| AjiI | CACGTC | 1 cut(s) | 822 |
| AjnI | CCWGG | 2 cut(s) | 528, 554 |
| AluBI | AGCT | 5 cut(s) | 227, 407, 637, 776, 1060 |
| AluI | AGCT | 5 cut(s) | 227, 407, 637, 776, 1060 |
| Alw21I | GWGCWC | 3 cut(s) | 655, 1035, 1062 |
| Alw26I | GTCTC | 2 cut(s) | 36, 951 |
| AlwI | GGATC | 4 cut(s) | 24, 508, 655, 959 |
| Ama87I | CYCGRG | 1 cut(s) | 584 |
| Aor13HI | TCCGGA | 1 cut(s) | 208 |
| AoxI | GGCC | 2 cut(s) | 60, 917 |
| ApeKI | GCWGC | 5 cut(s) | 83, 227, 308, 377, 776 |
| ApoI | RAATTY | 3 cut(s) | 21, 469, 1079 |
| AsiGI | ACCGGT | 1 cut(s) | 950 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 998 |
| AspLEI | GCGC | 2 cut(s) | 123, 368 |
| AspS9I | GGNCC | 3 cut(s) | 799, 918, 1006 |
| AsuC2I | CCSGG | 2 cut(s) | 585, 586 |
| AsuHPI | GGTGA | 1 cut(s) | 700 |
| AvaI | CYCGRG | 1 cut(s) | 584 |
| AvaII | GGWCC | 2 cut(s) | 799, 1006 |
| BalI | TGGCCA | 1 cut(s) | 62 |
| BanII | GRGCYC | 1 cut(s) | 1062 |
| BauI | CACGAG | 2 cut(s) | 327, 780 |
| BbsI | GAAGAC | 1 cut(s) | 873 |
| Bbv12I | GWGCWC | 3 cut(s) | 655, 1035, 1062 |
| BbvCI | CCTCAGC | 1 cut(s) | 930 |
| BbvI | GCAGC | 5 cut(s) | 70, 214, 320, 364, 763 |
| BccI | CCATC | 3 cut(s) | 52, 280, 723 |
| BciT130I | CCWGG | 2 cut(s) | 530, 556 |
| BcnI | CCSGG | 2 cut(s) | 585, 586 |
| BcoDI | GTCTC | 2 cut(s) | 36, 951 |
| BfaI | CTAG | 2 cut(s) | 489, 1102 |
| BfmI | CTRYAG | 1 cut(s) | 84 |
| BglII | AGATCT | 2 cut(s) | 683, 1025 |
| BisI | GCNGC | 5 cut(s) | 84, 228, 309, 378, 777 |
| BlsI | GCNGC | 5 cut(s) | 85, 229, 310, 379, 778 |
| Bme1390I | CCNGG | 4 cut(s) | 530, 556, 585, 586 |
| Bme18I | GGWCC | 2 cut(s) | 799, 1006 |
| BmeT110I | CYCGRG | 1 cut(s) | 584 |
| BmgBI | CACGTC | 1 cut(s) | 822 |
| BmgT120I | GGNCC | 3 cut(s) | 799, 918, 1006 |
| BmrFI | CCNGG | 4 cut(s) | 530, 556, 585, 586 |
| BmsI | GCATC | 4 cut(s) | 172, 450, 551, 970 |
| BpiI | GAAGAC | 1 cut(s) | 873 |
| Bpu10I | CCTNAGC | 1 cut(s) | 930 |
| BpuMI | CCSGG | 2 cut(s) | 585, 586 |
| BsaBI | GATNNNNATC | 1 cut(s) | 984 |
| BsaI | GGTCTC | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 3 cut(s) | 115, 584, 585 |
| BsaWI | WCCGGW | 2 cut(s) | 208, 950 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1025, 1055 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 248, 561 |
| Bse118I | RCCGGY | 3 cut(s) | 188, 644, 950 |
| Bse3DI | GCAATG | 1 cut(s) | 467 |
| Bse8I | GATNNNNATC | 1 cut(s) | 984 |
| BseAI | TCCGGA | 1 cut(s) | 208 |
| BseBI | CCWGG | 2 cut(s) | 530, 556 |
| BseDI | CCNNGG | 3 cut(s) | 115, 584, 585 |
| BseGI | GGATG | 4 cut(s) | 43, 130, 291, 525 |
| BseJI | GATNNNNATC | 1 cut(s) | 984 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 248, 561 |
| BseMI | GCAATG | 1 cut(s) | 467 |
| BseMII | CTCAG | 7 cut(s) | 47, 264, 363, 399, 400, 921, 1020 |
| BseRI | GAGGAG | 3 cut(s) | 427, 786, 914 |
| BseXI | GCAGC | 5 cut(s) | 70, 214, 320, 364, 763 |
| Bsh1236I | CGCG | 1 cut(s) | 123 |
| BshFI | GGCC | 2 cut(s) | 62, 919 |
| BshTI | ACCGGT | 1 cut(s) | 950 |
| BsiHKAI | GWGCWC | 3 cut(s) | 655, 1035, 1062 |
| BsiHKCI | CYCGRG | 1 cut(s) | 584 |
| BsiSI | CCGG | 5 cut(s) | 189, 209, 585, 645, 951 |
| BslFI | GGGAC | 1 cut(s) | 957 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 248, 561 |
| BsmAI | GTCTC | 2 cut(s) | 36, 951 |
| BsmFI | GGGAC | 1 cut(s) | 957 |
| BsmI | GAATGC | 3 cut(s) | 243, 569, 585 |
| BsnI | GGCC | 2 cut(s) | 62, 919 |
| Bso31I | GGTCTC | 1 cut(s) | 36 |
| BsoBI | CYCGRG | 1 cut(s) | 584 |
| Bsp1286I | GDGCHC | 3 cut(s) | 655, 1035, 1062 |
| Bsp13I | TCCGGA | 1 cut(s) | 208 |
| Bsp143I | GATC | 8 cut(s) | 16, 262, 340, 513, 660, 683, 964, 1025 |
| BspACI | CCGC | 2 cut(s) | 123, 1009 |
| BspANI | GGCC | 2 cut(s) | 62, 919 |
| BspCNI | CTCAG | 7 cut(s) | 46, 265, 362, 399, 400, 922, 1021 |
| BspEI | TCCGGA | 1 cut(s) | 208 |
| BspFNI | CGCG | 1 cut(s) | 123 |
| BspMAI | CTGCAG | 1 cut(s) | 88 |
| BspPI | GGATC | 4 cut(s) | 24, 508, 655, 959 |
| BspQI | GCTCTTC | 1 cut(s) | 1050 |
| BspTNI | GGTCTC | 1 cut(s) | 36 |
| BsrDI | GCAATG | 1 cut(s) | 467 |
| BsrFI | RCCGGY | 3 cut(s) | 188, 644, 950 |
| BssAI | RCCGGY | 3 cut(s) | 188, 644, 950 |
| BssECI | CCNNGG | 3 cut(s) | 115, 584, 585 |
| BssMI | GATC | 8 cut(s) | 16, 262, 340, 513, 660, 683, 964, 1025 |
| BssSI | CACGAG | 2 cut(s) | 327, 780 |
| Bst2BI | CACGAG | 2 cut(s) | 327, 780 |
| Bst2UI | CCWGG | 2 cut(s) | 530, 556 |
| Bst4CI | ACNGT | 7 cut(s) | 30, 251, 449, 692, 716, 756, 1037 |
| Bst6I | CTCTTC | 2 cut(s) | 45, 1050 |
| BstC8I | GCNNGC | 2 cut(s) | 567, 592 |
| BstDEI | CTNAG | 7 cut(s) | 33, 273, 349, 386, 408, 930, 1029 |
| BstF5I | GGATG | 4 cut(s) | 43, 130, 291, 525 |
| BstFNI | CGCG | 1 cut(s) | 123 |
| BstHHI | GCGC | 2 cut(s) | 123, 368 |
| BstKTI | GATC | 8 cut(s) | 19, 265, 343, 516, 663, 686, 967, 1028 |
| BstMAI | GTCTC | 2 cut(s) | 36, 951 |
| BstMBI | GATC | 8 cut(s) | 16, 262, 340, 513, 660, 683, 964, 1025 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 68, 89, 211, 374, 650 |
| BstNI | CCWGG | 2 cut(s) | 530, 556 |
| BstNSI | RCATGY | 1 cut(s) | 594 |
| BstSCI | CCNGG | 4 cut(s) | 528, 554, 583, 584 |
| BstSFI | CTRYAG | 1 cut(s) | 84 |
| BstUI | CGCG | 1 cut(s) | 123 |
| BstV1I | GCAGC | 5 cut(s) | 70, 214, 320, 364, 763 |
| BstV2I | GAAGAC | 1 cut(s) | 873 |
| BstX2I | RGATCY | 3 cut(s) | 513, 683, 1025 |
| BstYI | RGATCY | 3 cut(s) | 513, 683, 1025 |
| BsuRI | GGCC | 2 cut(s) | 62, 919 |
| BtgZI | GCGATG | 1 cut(s) | 64 |
| BtrI | CACGTC | 1 cut(s) | 822 |
| BtsCI | GGATG | 4 cut(s) | 43, 130, 291, 525 |
| Cac8I | GCNNGC | 2 cut(s) | 567, 592 |
| CfoI | GCGC | 2 cut(s) | 123, 368 |
| Cfr10I | RCCGGY | 3 cut(s) | 188, 644, 950 |
| Cfr13I | GGNCC | 3 cut(s) | 799, 918, 1006 |
| Cfr9I | CCCGGG | 1 cut(s) | 584 |
| Csp6I | GTAC | 1 cut(s) | 700 |
| CspAI | ACCGGT | 1 cut(s) | 950 |
| CviAII | CATG | 5 cut(s) | 140, 591, 814, 841, 1003 |
| CviJI | RGCY | 9 cut(s) | 62, 227, 311, 407, 488, 637, 776, 919, 1060 |
| CviKI_1 | RGCY | 9 cut(s) | 62, 227, 311, 407, 488, 637, 776, 919, 1060 |
| CviQI | GTAC | 1 cut(s) | 700 |
| DdeI | CTNAG | 7 cut(s) | 33, 273, 349, 386, 408, 930, 1029 |
| DpnI | GATC | 8 cut(s) | 18, 264, 342, 515, 662, 685, 966, 1027 |
| DpnII | GATC | 8 cut(s) | 16, 262, 340, 513, 660, 683, 964, 1025 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 605 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 605 |
| EaeI | YGGCCR | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 2 cut(s) | 45, 1050 |
| EarI | CTCTTC | 2 cut(s) | 45, 1050 |
| Ecl136II | GAGCTC | 1 cut(s) | 1060 |
| Eco24I | GRGCYC | 1 cut(s) | 1062 |
| Eco31I | GGTCTC | 1 cut(s) | 36 |
| Eco47I | GGWCC | 2 cut(s) | 799, 1006 |
| Eco53kI | GAGCTC | 1 cut(s) | 1060 |
| Eco57I | CTGAAG | 3 cut(s) | 299, 885, 1034 |
| Eco88I | CYCGRG | 1 cut(s) | 584 |
| EcoICRI | GAGCTC | 1 cut(s) | 1060 |
| EcoO109I | RGGNCCY | 1 cut(s) | 799 |
| EcoRII | CCWGG | 2 cut(s) | 528, 554 |
| EcoT22I | ATGCAT | 1 cut(s) | 456 |
| EcoT38I | GRGCYC | 1 cut(s) | 1062 |
| FaeI | CATG | 5 cut(s) | 143, 594, 817, 844, 1006 |
| FaqI | GGGAC | 1 cut(s) | 957 |
| FatI | CATG | 5 cut(s) | 139, 590, 813, 840, 1002 |
| FauNDI | CATATG | 1 cut(s) | 990 |
| Fnu4HI | GCNGC | 5 cut(s) | 84, 228, 309, 378, 777 |
| FokI | GGATG | 4 cut(s) | 50, 117, 298, 512 |
| FriOI | GRGCYC | 1 cut(s) | 1062 |
| Fsp4HI | GCNGC | 5 cut(s) | 84, 228, 309, 378, 777 |
| FspBI | CTAG | 2 cut(s) | 489, 1102 |
| GlaI | GCGC | 2 cut(s) | 122, 367 |
| GluI | GCNGC | 5 cut(s) | 84, 228, 309, 378, 777 |
| HaeIII | GGCC | 2 cut(s) | 62, 919 |
| HapII | CCGG | 5 cut(s) | 189, 209, 585, 645, 951 |
| HhaI | GCGC | 2 cut(s) | 123, 368 |
| Hin1II | CATG | 5 cut(s) | 143, 594, 817, 844, 1006 |
| Hin6I | GCGC | 2 cut(s) | 121, 366 |
| HinP1I | GCGC | 2 cut(s) | 121, 366 |
| HincII | GTYRAC | 2 cut(s) | 676, 819 |
| HindII | GTYRAC | 2 cut(s) | 676, 819 |
| HinfI | GANTC | 4 cut(s) | 98, 136, 887, 999 |
| HpaI | GTTAAC | 1 cut(s) | 676 |
| HpaII | CCGG | 5 cut(s) | 189, 209, 585, 645, 951 |
| HphI | GGTGA | 1 cut(s) | 700 |
| Hpy166II | GTNNAC | 2 cut(s) | 676, 819 |
| Hpy188I | TCNGA | 8 cut(s) | 135, 200, 285, 389, 477, 660, 892, 1030 |
| Hpy188III | TCNNGA | 5 cut(s) | 35, 102, 209, 742, 1052 |
| Hpy8I | GTNNAC | 2 cut(s) | 676, 819 |
| Hpy99I | CGWCG | 3 cut(s) | 30, 308, 716 |
| HpyAV | CCTTC | 3 cut(s) | 323, 812, 1058 |
| HpyCH4III | ACNGT | 7 cut(s) | 30, 251, 449, 692, 716, 756, 1037 |
| HpyCH4IV | ACGT | 2 cut(s) | 606, 821 |
| HpyCH4V | TGCA | 4 cut(s) | 86, 143, 454, 594 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 68, 89, 211, 374, 650 |
| HpyF3I | CTNAG | 7 cut(s) | 33, 273, 349, 386, 408, 930, 1029 |
| HpySE526I | ACGT | 2 cut(s) | 606, 821 |
| Hsp92II | CATG | 5 cut(s) | 143, 594, 817, 844, 1006 |
| HspAI | GCGC | 2 cut(s) | 121, 366 |
| Kpn2I | TCCGGA | 1 cut(s) | 208 |
| KspAI | GTTAAC | 1 cut(s) | 676 |
| Kzo9I | GATC | 8 cut(s) | 16, 262, 340, 513, 660, 683, 964, 1025 |
| LguI | GCTCTTC | 1 cut(s) | 1050 |
| LmnI | GCTCC | 4 cut(s) | 211, 373, 438, 773 |
| Lsp1109I | GCAGC | 5 cut(s) | 70, 214, 320, 364, 763 |
| LweI | GCATC | 4 cut(s) | 172, 450, 551, 970 |
| MaeI | CTAG | 2 cut(s) | 489, 1102 |
| MaeII | ACGT | 2 cut(s) | 606, 821 |
| MaeIII | GTNAC | 1 cut(s) | 1037 |
| MalI | GATC | 8 cut(s) | 18, 264, 342, 515, 662, 685, 966, 1027 |
| MboI | GATC | 8 cut(s) | 16, 262, 340, 513, 660, 683, 964, 1025 |
| MboII | GAAGA | 8 cut(s) | 53, 62, 107, 179, 229, 478, 878, 1067 |
| MfeI | CAATTG | 1 cut(s) | 333 |
| MflI | RGATCY | 3 cut(s) | 513, 683, 1025 |
| MhlI | GDGCHC | 3 cut(s) | 655, 1035, 1062 |
| MlsI | TGGCCA | 1 cut(s) | 62 |
| MluCI | AATT | 7 cut(s) | 7, 21, 333, 469, 665, 1020, 1079 |
| MluNI | TGGCCA | 1 cut(s) | 62 |
| MlyI | GAGTC | 2 cut(s) | 145, 896 |
| MmeI | TCCRAC | 4 cut(s) | 178, 263, 864, 1068 |
| Mox20I | TGGCCA | 1 cut(s) | 62 |
| Mph1103I | ATGCAT | 1 cut(s) | 456 |
| MroI | TCCGGA | 1 cut(s) | 208 |
| MroXI | GAANNNNTTC | 1 cut(s) | 998 |
| MscI | TGGCCA | 1 cut(s) | 62 |
| MseI | TTAA | 1 cut(s) | 675 |
| Msp20I | TGGCCA | 1 cut(s) | 62 |
| MspA1I | CMGCKG | 1 cut(s) | 227 |
| MspI | CCGG | 5 cut(s) | 189, 209, 585, 645, 951 |
| MspR9I | CCNGG | 4 cut(s) | 530, 556, 585, 586 |
| MunI | CAATTG | 1 cut(s) | 333 |
| Mva1269I | GAATGC | 3 cut(s) | 243, 569, 585 |
| MvaI | CCWGG | 2 cut(s) | 530, 556 |
| MvnI | CGCG | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 68, 89, 211, 374, 650 |
| NciI | CCSGG | 2 cut(s) | 585, 586 |
| NdeI | CATATG | 1 cut(s) | 990 |
| NdeII | GATC | 8 cut(s) | 16, 262, 340, 513, 660, 683, 964, 1025 |
| NlaIII | CATG | 5 cut(s) | 143, 594, 817, 844, 1006 |
| NmuCI | GTSAC | 1 cut(s) | 1037 |
| NsiI | ATGCAT | 1 cut(s) | 456 |
| NspI | RCATGY | 1 cut(s) | 594 |
| PaeI | GCATGC | 1 cut(s) | 594 |
| PciSI | GCTCTTC | 1 cut(s) | 1050 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 546, 603 |
| PctI | GAATGC | 3 cut(s) | 243, 569, 585 |
| PdmI | GAANNNNTTC | 1 cut(s) | 998 |
| PfeI | GAWTC | 2 cut(s) | 98, 999 |
| PfoI | TCCNGGA | 1 cut(s) | 528 |
| PinAI | ACCGGT | 1 cut(s) | 950 |
| PkrI | GCNGC | 5 cut(s) | 85, 229, 310, 379, 778 |
| PleI | GAGTC | 2 cut(s) | 144, 895 |
| PpsI | GAGTC | 2 cut(s) | 144, 895 |
| PpuMI | RGGWCCY | 1 cut(s) | 799 |
| Psp124BI | GAGCTC | 1 cut(s) | 1062 |
| Psp5II | RGGWCCY | 1 cut(s) | 799 |
| Psp6I | CCWGG | 2 cut(s) | 528, 554 |
| PspGI | CCWGG | 2 cut(s) | 528, 554 |
| PspPI | GGNCC | 3 cut(s) | 799, 918, 1006 |
| PspPPI | RGGWCCY | 1 cut(s) | 799 |
| PstI | CTGCAG | 1 cut(s) | 88 |
| PsuI | RGATCY | 3 cut(s) | 513, 683, 1025 |
| PvuII | CAGCTG | 1 cut(s) | 227 |
| RsaI | GTAC | 1 cut(s) | 701 |
| RsaNI | GTAC | 1 cut(s) | 700 |
| SacI | GAGCTC | 1 cut(s) | 1062 |
| SapI | GCTCTTC | 1 cut(s) | 1050 |
| SaqAI | TTAA | 1 cut(s) | 675 |
| SatI | GCNGC | 5 cut(s) | 84, 228, 309, 378, 777 |
| Sau3AI | GATC | 8 cut(s) | 16, 262, 340, 513, 660, 683, 964, 1025 |
| Sau96I | GGNCC | 3 cut(s) | 799, 918, 1006 |
| SchI | GAGTC | 2 cut(s) | 145, 896 |
| ScrFI | CCNGG | 4 cut(s) | 530, 556, 585, 586 |
| SduI | GDGCHC | 3 cut(s) | 655, 1035, 1062 |
| SfaNI | GCATC | 4 cut(s) | 172, 450, 551, 970 |
| SfcI | CTRYAG | 1 cut(s) | 84 |
| SinI | GGWCC | 2 cut(s) | 799, 1006 |
| SmaI | CCCGGG | 1 cut(s) | 586 |
| SphI | GCATGC | 1 cut(s) | 594 |
| Sse9I | AATT | 7 cut(s) | 7, 21, 333, 469, 665, 1020, 1079 |
| SsiI | CCGC | 2 cut(s) | 123, 1009 |
| SspMI | CTAG | 2 cut(s) | 489, 1102 |
| SstI | GAGCTC | 1 cut(s) | 1062 |
| StyD4I | CCNGG | 4 cut(s) | 528, 554, 583, 584 |
| TaaI | ACNGT | 7 cut(s) | 30, 251, 449, 692, 716, 756, 1037 |
| TaiI | ACGT | 2 cut(s) | 609, 824 |
| TaqI | TCGA | 5 cut(s) | 25, 444, 727, 805, 849 |
| TasI | AATT | 7 cut(s) | 7, 21, 333, 469, 665, 1020, 1079 |
| TfiI | GAWTC | 2 cut(s) | 98, 999 |
| Tru1I | TTAA | 1 cut(s) | 675 |
| Tru9I | TTAA | 1 cut(s) | 675 |
| TseFI | GTSAC | 1 cut(s) | 1037 |
| TseI | GCWGC | 5 cut(s) | 83, 227, 308, 377, 776 |
| Tsp45I | GTSAC | 1 cut(s) | 1037 |
| TspDTI | ATGAA | 6 cut(s) | 17, 54, 63, 870, 991, 1007 |
| TspGWI | ACGGA | 2 cut(s) | 292, 1011 |
| TspMI | CCCGGG | 1 cut(s) | 584 |
| VpaK11BI | GGWCC | 2 cut(s) | 799, 1006 |
| XapI | RAATTY | 3 cut(s) | 21, 469, 1079 |
| XceI | RCATGY | 1 cut(s) | 594 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 526 |
| XmaI | CCCGGG | 1 cut(s) | 584 |
| XmnI | GAANNNNTTC | 1 cut(s) | 998 |
| XspI | CTAG | 2 cut(s) | 489, 1102 |
| Zsp2I | ATGCAT | 1 cut(s) | 456 |