Plant transposon protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 200 |
| Acc36I | ACCTGC | 1 cut(s) | 216 |
| AccI | GTMKAC | 1 cut(s) | 204 |
| AccII | CGCG | 2 cut(s) | 123, 507 |
| AccIII | TCCGGA | 2 cut(s) | 226, 349 |
| AciI | CCGC | 2 cut(s) | 123, 505 |
| AclWI | GGATC | 2 cut(s) | 24, 218 |
| AcoI | YGGCCR | 2 cut(s) | 60, 189 |
| AcsI | RAATTY | 1 cut(s) | 21 |
| AfaI | GTAC | 1 cut(s) | 389 |
| AflIII | ACRYGT | 1 cut(s) | 239 |
| AgsI | TTSAA | 3 cut(s) | 220, 268, 314 |
| AluBI | AGCT | 1 cut(s) | 368 |
| AluI | AGCT | 1 cut(s) | 368 |
| Alw21I | GWGCWC | 1 cut(s) | 145 |
| Alw26I | GTCTC | 2 cut(s) | 36, 260 |
| Alw44I | GTGCAC | 1 cut(s) | 141 |
| AlwI | GGATC | 2 cut(s) | 24, 218 |
| Aor13HI | TCCGGA | 2 cut(s) | 226, 349 |
| AoxI | GGCC | 2 cut(s) | 60, 189 |
| ApaLI | GTGCAC | 1 cut(s) | 141 |
| ApeKI | GCWGC | 3 cut(s) | 83, 368, 518 |
| ApoI | RAATTY | 1 cut(s) | 21 |
| AspLEI | GCGC | 2 cut(s) | 123, 509 |
| AsuC2I | CCSGG | 1 cut(s) | 135 |
| BaeGI | GKGCMC | 1 cut(s) | 145 |
| BalI | TGGCCA | 1 cut(s) | 62 |
| BauI | CACGAG | 1 cut(s) | 468 |
| Bbv12I | GWGCWC | 1 cut(s) | 145 |
| BbvI | GCAGC | 3 cut(s) | 70, 355, 530 |
| BccI | CCATC | 2 cut(s) | 52, 71 |
| BcnI | CCSGG | 1 cut(s) | 135 |
| BcoDI | GTCTC | 2 cut(s) | 36, 260 |
| BfmI | CTRYAG | 2 cut(s) | 84, 516 |
| BfuAI | ACCTGC | 1 cut(s) | 216 |
| BisI | GCNGC | 3 cut(s) | 84, 369, 519 |
| BlsI | GCNGC | 3 cut(s) | 85, 370, 520 |
| Bme1390I | CCNGG | 1 cut(s) | 135 |
| BmrFI | CCNGG | 1 cut(s) | 135 |
| BmsI | GCATC | 1 cut(s) | 313 |
| BpuMI | CCSGG | 1 cut(s) | 135 |
| BsaBI | GATNNNNATC | 1 cut(s) | 62 |
| BsaI | GGTCTC | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 1 cut(s) | 115 |
| BsaWI | WCCGGW | 2 cut(s) | 226, 349 |
| Bse118I | RCCGGY | 1 cut(s) | 329 |
| Bse1I | ACTGG | 2 cut(s) | 212, 292 |
| Bse8I | GATNNNNATC | 1 cut(s) | 62 |
| BseAI | TCCGGA | 2 cut(s) | 226, 349 |
| BseDI | CCNNGG | 1 cut(s) | 115 |
| BseGI | GGATG | 2 cut(s) | 43, 130 |
| BseJI | GATNNNNATC | 1 cut(s) | 62 |
| BseMII | CTCAG | 1 cut(s) | 47 |
| BseNI | ACTGG | 2 cut(s) | 212, 292 |
| BseSI | GKGCMC | 1 cut(s) | 145 |
| BseXI | GCAGC | 3 cut(s) | 70, 355, 530 |
| Bsh1236I | CGCG | 2 cut(s) | 123, 507 |
| BshFI | GGCC | 2 cut(s) | 62, 191 |
| BsiHKAI | GWGCWC | 1 cut(s) | 145 |
| BsiSI | CCGG | 4 cut(s) | 134, 227, 330, 350 |
| BsiWI | CGTACG | 1 cut(s) | 387 |
| BsmAI | GTCTC | 2 cut(s) | 36, 260 |
| BsmI | GAATGC | 1 cut(s) | 384 |
| BsnI | GGCC | 2 cut(s) | 62, 191 |
| Bso31I | GGTCTC | 1 cut(s) | 36 |
| Bsp1286I | GDGCHC | 1 cut(s) | 145 |
| Bsp13I | TCCGGA | 2 cut(s) | 226, 349 |
| Bsp143I | GATC | 4 cut(s) | 16, 223, 298, 481 |
| BspACI | CCGC | 2 cut(s) | 123, 505 |
| BspANI | GGCC | 2 cut(s) | 62, 191 |
| BspCNI | CTCAG | 1 cut(s) | 46 |
| BspEI | TCCGGA | 2 cut(s) | 226, 349 |
| BspFNI | CGCG | 2 cut(s) | 123, 507 |
| BspMAI | CTGCAG | 2 cut(s) | 88, 520 |
| BspMI | ACCTGC | 1 cut(s) | 216 |
| BspPI | GGATC | 2 cut(s) | 24, 218 |
| BspTNI | GGTCTC | 1 cut(s) | 36 |
| BsrFI | RCCGGY | 1 cut(s) | 329 |
| BsrI | ACTGG | 2 cut(s) | 212, 292 |
| BssAI | RCCGGY | 1 cut(s) | 329 |
| BssECI | CCNNGG | 1 cut(s) | 115 |
| BssMI | GATC | 4 cut(s) | 16, 223, 298, 481 |
| BssSI | CACGAG | 1 cut(s) | 468 |
| Bst2BI | CACGAG | 1 cut(s) | 468 |
| Bst4CI | ACNGT | 1 cut(s) | 30 |
| Bst6I | CTCTTC | 2 cut(s) | 45, 269 |
| BstC8I | GCNNGC | 1 cut(s) | 384 |
| BstDEI | CTNAG | 4 cut(s) | 33, 161, 414, 527 |
| BstF5I | GGATG | 2 cut(s) | 43, 130 |
| BstFNI | CGCG | 2 cut(s) | 123, 507 |
| BstHHI | GCGC | 2 cut(s) | 123, 509 |
| BstKTI | GATC | 4 cut(s) | 19, 226, 301, 484 |
| BstMAI | GTCTC | 2 cut(s) | 36, 260 |
| BstMBI | GATC | 4 cut(s) | 16, 223, 298, 481 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 89, 352, 392, 515 |
| BstNSI | RCATGY | 1 cut(s) | 243 |
| BstSCI | CCNGG | 1 cut(s) | 133 |
| BstSFI | CTRYAG | 2 cut(s) | 84, 516 |
| BstSLI | GKGCMC | 1 cut(s) | 145 |
| BstUI | CGCG | 2 cut(s) | 123, 507 |
| BstV1I | GCAGC | 3 cut(s) | 70, 355, 530 |
| BstX2I | RGATCY | 1 cut(s) | 223 |
| BstYI | RGATCY | 1 cut(s) | 223 |
| BsuRI | GGCC | 2 cut(s) | 62, 191 |
| BtgZI | GCGATG | 1 cut(s) | 64 |
| BtsCI | GGATG | 2 cut(s) | 43, 130 |
| BtsIMutI | CAGTG | 1 cut(s) | 219 |
| BveI | ACCTGC | 1 cut(s) | 216 |
| Cac8I | GCNNGC | 1 cut(s) | 384 |
| CfoI | GCGC | 2 cut(s) | 123, 509 |
| Cfr10I | RCCGGY | 1 cut(s) | 329 |
| Csp6I | GTAC | 1 cut(s) | 388 |
| CviAII | CATG | 1 cut(s) | 240 |
| CviJI | RGCY | 5 cut(s) | 62, 191, 368, 452, 521 |
| CviKI_1 | RGCY | 5 cut(s) | 62, 191, 368, 452, 521 |
| CviQI | GTAC | 1 cut(s) | 388 |
| DdeI | CTNAG | 4 cut(s) | 33, 161, 414, 527 |
| DpnI | GATC | 4 cut(s) | 18, 225, 300, 483 |
| DpnII | GATC | 4 cut(s) | 16, 223, 298, 481 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 200 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 200 |
| EaeI | YGGCCR | 2 cut(s) | 60, 189 |
| Eam1104I | CTCTTC | 2 cut(s) | 45, 269 |
| EarI | CTCTTC | 2 cut(s) | 45, 269 |
| Eco31I | GGTCTC | 1 cut(s) | 36 |
| FaeI | CATG | 1 cut(s) | 243 |
| FaiI | YATR | 4 cut(s) | 185, 241, 275, 297 |
| FatI | CATG | 1 cut(s) | 239 |
| FblI | GTMKAC | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 3 cut(s) | 84, 369, 519 |
| FokI | GGATG | 2 cut(s) | 50, 117 |
| Fsp4HI | GCNGC | 3 cut(s) | 84, 369, 519 |
| GlaI | GCGC | 2 cut(s) | 122, 508 |
| GluI | GCNGC | 3 cut(s) | 84, 369, 519 |
| HaeIII | GGCC | 2 cut(s) | 62, 191 |
| HapII | CCGG | 4 cut(s) | 134, 227, 330, 350 |
| HhaI | GCGC | 2 cut(s) | 123, 509 |
| Hin1II | CATG | 1 cut(s) | 243 |
| Hin6I | GCGC | 2 cut(s) | 121, 507 |
| HinP1I | GCGC | 2 cut(s) | 121, 507 |
| HincII | GTYRAC | 1 cut(s) | 205 |
| HindII | GTYRAC | 1 cut(s) | 205 |
| HinfI | GANTC | 2 cut(s) | 98, 253 |
| HpaII | CCGG | 4 cut(s) | 134, 227, 330, 350 |
| Hpy166II | GTNNAC | 2 cut(s) | 143, 205 |
| Hpy188I | TCNGA | 4 cut(s) | 236, 322, 341, 530 |
| Hpy188III | TCNNGA | 4 cut(s) | 35, 102, 227, 350 |
| Hpy8I | GTNNAC | 2 cut(s) | 143, 205 |
| Hpy99I | CGWCG | 2 cut(s) | 30, 449 |
| HpyCH4III | ACNGT | 1 cut(s) | 30 |
| HpyCH4IV | ACGT | 1 cut(s) | 69 |
| HpyCH4V | TGCA | 3 cut(s) | 86, 143, 518 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 89, 352, 392, 515 |
| HpyF3I | CTNAG | 4 cut(s) | 33, 161, 414, 527 |
| HpySE526I | ACGT | 1 cut(s) | 69 |
| Hsp92II | CATG | 1 cut(s) | 243 |
| HspAI | GCGC | 2 cut(s) | 121, 507 |
| Kpn2I | TCCGGA | 2 cut(s) | 226, 349 |
| Kzo9I | GATC | 4 cut(s) | 16, 223, 298, 481 |
| LmnI | GCTCC | 3 cut(s) | 352, 392, 514 |
| Lsp1109I | GCAGC | 3 cut(s) | 70, 355, 530 |
| LweI | GCATC | 1 cut(s) | 313 |
| MaeII | ACGT | 1 cut(s) | 69 |
| MaeIII | GTNAC | 2 cut(s) | 242, 302 |
| MalI | GATC | 4 cut(s) | 18, 225, 300, 483 |
| MboI | GATC | 4 cut(s) | 16, 223, 298, 481 |
| MboII | GAAGA | 6 cut(s) | 53, 62, 107, 179, 256, 370 |
| MflI | RGATCY | 1 cut(s) | 223 |
| MhlI | GDGCHC | 1 cut(s) | 145 |
| MlsI | TGGCCA | 1 cut(s) | 62 |
| MluCI | AATT | 3 cut(s) | 7, 21, 474 |
| MluNI | TGGCCA | 1 cut(s) | 62 |
| MlyI | GAGTC | 1 cut(s) | 262 |
| MmeI | TCCRAC | 1 cut(s) | 319 |
| MnlI | CCTC | 5 cut(s) | 110, 145, 451, 464, 512 |
| Mox20I | TGGCCA | 1 cut(s) | 62 |
| MroI | TCCGGA | 2 cut(s) | 226, 349 |
| MscI | TGGCCA | 1 cut(s) | 62 |
| Msp20I | TGGCCA | 1 cut(s) | 62 |
| MspA1I | CMGCKG | 1 cut(s) | 368 |
| MspI | CCGG | 4 cut(s) | 134, 227, 330, 350 |
| MspR9I | CCNGG | 1 cut(s) | 135 |
| Mva1269I | GAATGC | 1 cut(s) | 384 |
| MvnI | CGCG | 2 cut(s) | 123, 507 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 89, 352, 392, 515 |
| NciI | CCSGG | 1 cut(s) | 135 |
| NdeII | GATC | 4 cut(s) | 16, 223, 298, 481 |
| NlaIII | CATG | 1 cut(s) | 243 |
| NspI | RCATGY | 1 cut(s) | 243 |
| PciI | ACATGT | 1 cut(s) | 239 |
| PctI | GAATGC | 1 cut(s) | 384 |
| PfeI | GAWTC | 1 cut(s) | 98 |
| Pfl23II | CGTACG | 1 cut(s) | 387 |
| PkrI | GCNGC | 3 cut(s) | 85, 370, 520 |
| PleI | GAGTC | 1 cut(s) | 261 |
| PpsI | GAGTC | 1 cut(s) | 261 |
| PscI | ACATGT | 1 cut(s) | 239 |
| PspLI | CGTACG | 1 cut(s) | 387 |
| PstI | CTGCAG | 2 cut(s) | 88, 520 |
| PsuI | RGATCY | 1 cut(s) | 223 |
| PvuII | CAGCTG | 1 cut(s) | 368 |
| RsaI | GTAC | 1 cut(s) | 389 |
| RsaNI | GTAC | 1 cut(s) | 388 |
| SalI | GTCGAC | 1 cut(s) | 203 |
| SatI | GCNGC | 3 cut(s) | 84, 369, 519 |
| Sau3AI | GATC | 4 cut(s) | 16, 223, 298, 481 |
| SchI | GAGTC | 1 cut(s) | 262 |
| ScrFI | CCNGG | 1 cut(s) | 135 |
| SduI | GDGCHC | 1 cut(s) | 145 |
| SetI | ASST | 9 cut(s) | 72, 184, 210, 288, 320, 370, 443, 504, 528 |
| SfaNI | GCATC | 1 cut(s) | 313 |
| SfcI | CTRYAG | 2 cut(s) | 84, 516 |
| Sse9I | AATT | 3 cut(s) | 7, 21, 474 |
| SsiI | CCGC | 2 cut(s) | 123, 505 |
| StyD4I | CCNGG | 1 cut(s) | 133 |
| TaaI | ACNGT | 1 cut(s) | 30 |
| TaiI | ACGT | 1 cut(s) | 72 |
| TaqI | TCGA | 3 cut(s) | 25, 204, 424 |
| TasI | AATT | 3 cut(s) | 7, 21, 474 |
| TfiI | GAWTC | 1 cut(s) | 98 |
| TscAI | CASTG | 1 cut(s) | 219 |
| TseI | GCWGC | 3 cut(s) | 83, 368, 518 |
| TspDTI | ATGAA | 3 cut(s) | 17, 54, 63 |
| TspGWI | ACGGA | 2 cut(s) | 405, 433 |
| TspRI | CASTG | 1 cut(s) | 219 |
| VneI | GTGCAC | 1 cut(s) | 141 |
| XapI | RAATTY | 1 cut(s) | 21 |
| XceI | RCATGY | 1 cut(s) | 243 |
| XmiI | GTMKAC | 1 cut(s) | 204 |