Plant transposon protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 196, 294 |
| AclWI | GGATC | 3 cut(s) | 146, 207, 285 |
| AcsI | RAATTY | 1 cut(s) | 265 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 123, 237 |
| AflIII | ACRYGT | 1 cut(s) | 8 |
| AgsI | TTSAA | 2 cut(s) | 253, 271 |
| AjnI | CCWGG | 1 cut(s) | 107 |
| AluBI | AGCT | 1 cut(s) | 359 |
| AluI | AGCT | 1 cut(s) | 359 |
| Alw21I | GWGCWC | 1 cut(s) | 222 |
| Alw26I | GTCTC | 1 cut(s) | 138 |
| AlwI | GGATC | 3 cut(s) | 146, 207, 285 |
| AoxI | GGCC | 1 cut(s) | 104 |
| ApoI | RAATTY | 1 cut(s) | 265 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 185 |
| AspS9I | GGNCC | 2 cut(s) | 105, 193 |
| AvaII | GGWCC | 1 cut(s) | 193 |
| BbsI | GAAGAC | 2 cut(s) | 60, 248 |
| Bbv12I | GWGCWC | 1 cut(s) | 222 |
| BciT130I | CCWGG | 1 cut(s) | 109 |
| BcoDI | GTCTC | 1 cut(s) | 138 |
| BfaI | CTAG | 1 cut(s) | 288 |
| Bme1390I | CCNGG | 1 cut(s) | 109 |
| Bme18I | GGWCC | 1 cut(s) | 193 |
| BmgT120I | GGNCC | 2 cut(s) | 105, 193 |
| BmrFI | CCNGG | 1 cut(s) | 109 |
| BmsI | GCATC | 1 cut(s) | 157 |
| BpiI | GAAGAC | 2 cut(s) | 60, 248 |
| BsaBI | GATNNNNATC | 1 cut(s) | 171 |
| BsaJI | CCNNGG | 2 cut(s) | 107, 117 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 212, 242 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 123, 237 |
| Bse8I | GATNNNNATC | 1 cut(s) | 171 |
| BseBI | CCWGG | 1 cut(s) | 109 |
| BseDI | CCNNGG | 2 cut(s) | 107, 117 |
| BseJI | GATNNNNATC | 1 cut(s) | 171 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 123, 237 |
| BseRI | GAGGAG | 1 cut(s) | 101 |
| BshFI | GGCC | 1 cut(s) | 106 |
| BsiHKAI | GWGCWC | 1 cut(s) | 222 |
| BslFI | GGGAC | 1 cut(s) | 144 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 123, 237 |
| BsmAI | GTCTC | 1 cut(s) | 138 |
| BsmFI | GGGAC | 1 cut(s) | 144 |
| BsnI | GGCC | 1 cut(s) | 106 |
| Bsp1286I | GDGCHC | 1 cut(s) | 222 |
| Bsp143I | GATC | 4 cut(s) | 151, 212, 223, 290 |
| BspACI | CCGC | 2 cut(s) | 196, 294 |
| BspANI | GGCC | 1 cut(s) | 106 |
| BspPI | GGATC | 3 cut(s) | 146, 207, 285 |
| BssECI | CCNNGG | 2 cut(s) | 107, 117 |
| BssMI | GATC | 4 cut(s) | 151, 212, 223, 290 |
| Bst2UI | CCWGG | 1 cut(s) | 109 |
| Bst4CI | ACNGT | 1 cut(s) | 59 |
| BstKTI | GATC | 4 cut(s) | 154, 215, 226, 293 |
| BstMAI | GTCTC | 1 cut(s) | 138 |
| BstMBI | GATC | 4 cut(s) | 151, 212, 223, 290 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 302 |
| BstNI | CCWGG | 1 cut(s) | 109 |
| BstNSI | RCATGY | 1 cut(s) | 12 |
| BstSCI | CCNGG | 1 cut(s) | 107 |
| BstV2I | GAAGAC | 2 cut(s) | 60, 248 |
| BstX2I | RGATCY | 2 cut(s) | 212, 290 |
| BstYI | RGATCY | 2 cut(s) | 212, 290 |
| BsuRI | GGCC | 1 cut(s) | 106 |
| BtsIMutI | CAGTG | 1 cut(s) | 64 |
| Cfr13I | GGNCC | 2 cut(s) | 105, 193 |
| CviAII | CATG | 3 cut(s) | 9, 28, 190 |
| CviJI | RGCY | 2 cut(s) | 106, 359 |
| CviKI_1 | RGCY | 2 cut(s) | 106, 359 |
| DpnI | GATC | 4 cut(s) | 153, 214, 225, 292 |
| DpnII | GATC | 4 cut(s) | 151, 212, 223, 290 |
| Eco47I | GGWCC | 1 cut(s) | 193 |
| EcoRII | CCWGG | 1 cut(s) | 107 |
| FaeI | CATG | 3 cut(s) | 12, 31, 193 |
| FaqI | GGGAC | 1 cut(s) | 144 |
| FatI | CATG | 3 cut(s) | 8, 27, 189 |
| FauNDI | CATATG | 1 cut(s) | 177 |
| FspBI | CTAG | 1 cut(s) | 288 |
| HaeIII | GGCC | 1 cut(s) | 106 |
| Hin1II | CATG | 3 cut(s) | 12, 31, 193 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HinfI | GANTC | 2 cut(s) | 74, 186 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 3 cut(s) | 79, 217, 240 |
| Hpy188III | TCNNGA | 1 cut(s) | 288 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyAV | CCTTC | 1 cut(s) | 245 |
| HpyCH4III | ACNGT | 1 cut(s) | 59 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 302 |
| Hsp92II | CATG | 3 cut(s) | 12, 31, 193 |
| Kzo9I | GATC | 4 cut(s) | 151, 212, 223, 290 |
| LpnPI | CCDG | 2 cut(s) | 94, 121 |
| LweI | GCATC | 1 cut(s) | 157 |
| MaeI | CTAG | 1 cut(s) | 288 |
| MalI | GATC | 4 cut(s) | 153, 214, 225, 292 |
| MboI | GATC | 4 cut(s) | 151, 212, 223, 290 |
| MboII | GAAGA | 2 cut(s) | 65, 253 |
| MflI | RGATCY | 2 cut(s) | 212, 290 |
| MhlI | GDGCHC | 1 cut(s) | 222 |
| MluCI | AATT | 3 cut(s) | 207, 265, 333 |
| MlyI | GAGTC | 1 cut(s) | 83 |
| MmeI | TCCRAC | 2 cut(s) | 51, 255 |
| MnlI | CCTC | 6 cut(s) | 79, 82, 96, 112, 121, 256 |
| MroXI | GAANNNNTTC | 1 cut(s) | 185 |
| MseI | TTAA | 1 cut(s) | 332 |
| MspR9I | CCNGG | 1 cut(s) | 109 |
| MvaI | CCWGG | 1 cut(s) | 109 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 302 |
| NdeI | CATATG | 1 cut(s) | 177 |
| NdeII | GATC | 4 cut(s) | 151, 212, 223, 290 |
| NlaIII | CATG | 3 cut(s) | 12, 31, 193 |
| NmeAIII | GCCGAG | 1 cut(s) | 142 |
| NspI | RCATGY | 1 cut(s) | 12 |
| PciI | ACATGT | 1 cut(s) | 8 |
| PdmI | GAANNNNTTC | 1 cut(s) | 185 |
| PfeI | GAWTC | 1 cut(s) | 186 |
| PleI | GAGTC | 1 cut(s) | 82 |
| PpsI | GAGTC | 1 cut(s) | 82 |
| PscI | ACATGT | 1 cut(s) | 8 |
| Psp6I | CCWGG | 1 cut(s) | 107 |
| PspGI | CCWGG | 1 cut(s) | 107 |
| PspPI | GGNCC | 2 cut(s) | 105, 193 |
| PsuI | RGATCY | 2 cut(s) | 212, 290 |
| SaqAI | TTAA | 1 cut(s) | 332 |
| Sau3AI | GATC | 4 cut(s) | 151, 212, 223, 290 |
| Sau96I | GGNCC | 2 cut(s) | 105, 193 |
| SchI | GAGTC | 1 cut(s) | 83 |
| ScrFI | CCNGG | 1 cut(s) | 109 |
| SduI | GDGCHC | 1 cut(s) | 222 |
| SetI | ASST | 4 cut(s) | 123, 237, 248, 361 |
| SfaNI | GCATC | 1 cut(s) | 157 |
| SinI | GGWCC | 1 cut(s) | 193 |
| Sse9I | AATT | 3 cut(s) | 207, 265, 333 |
| SsiI | CCGC | 2 cut(s) | 196, 294 |
| SspMI | CTAG | 1 cut(s) | 288 |
| StyD4I | CCNGG | 1 cut(s) | 107 |
| TaaI | ACNGT | 1 cut(s) | 59 |
| TasI | AATT | 3 cut(s) | 207, 265, 333 |
| TfiI | GAWTC | 1 cut(s) | 186 |
| Tru1I | TTAA | 1 cut(s) | 332 |
| Tru9I | TTAA | 1 cut(s) | 332 |
| TscAI | CASTG | 1 cut(s) | 64 |
| TspDTI | ATGAA | 5 cut(s) | 57, 178, 194, 341, 353 |
| TspGWI | ACGGA | 1 cut(s) | 198 |
| TspRI | CASTG | 1 cut(s) | 64 |
| VpaK11BI | GGWCC | 1 cut(s) | 193 |
| XapI | RAATTY | 1 cut(s) | 265 |
| XbaI | TCTAGA | 1 cut(s) | 287 |
| XceI | RCATGY | 1 cut(s) | 12 |
| XmnI | GAANNNNTTC | 1 cut(s) | 185 |
| XspI | CTAG | 1 cut(s) | 288 |