Ribosomal protein-like protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Plant_tran | PF04827 | 147 - 255 | 7.1e-34 | Plant transposon protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 735, 771 |
| Acc16I | TGCGCA | 1 cut(s) | 75 |
| AccB1I | GGYRCC | 1 cut(s) | 589 |
| AccI | GTMKAC | 1 cut(s) | 213 |
| AccIII | TCCGGA | 1 cut(s) | 342 |
| AcsI | RAATTY | 1 cut(s) | 4 |
| AcyI | GRCGYC | 2 cut(s) | 253, 301 |
| AfaI | GTAC | 4 cut(s) | 548, 747, 915, 937 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 397 |
| AflIII | ACRYGT | 1 cut(s) | 961 |
| AgsI | TTSAA | 2 cut(s) | 10, 143 |
| AjnI | CCWGG | 1 cut(s) | 304 |
| AluBI | AGCT | 4 cut(s) | 116, 203, 719, 821 |
| AluI | AGCT | 4 cut(s) | 116, 203, 719, 821 |
| Alw21I | GWGCWC | 2 cut(s) | 338, 823 |
| Aor13HI | TCCGGA | 1 cut(s) | 342 |
| AoxI | GGCC | 1 cut(s) | 841 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| ApoI | RAATTY | 1 cut(s) | 4 |
| AspLEI | GCGC | 1 cut(s) | 76 |
| AspS9I | GGNCC | 1 cut(s) | 842 |
| AsuHPI | GGTGA | 2 cut(s) | 311, 492 |
| AsuNHI | GCTAGC | 1 cut(s) | 349 |
| BanI | GGYRCC | 1 cut(s) | 589 |
| BanII | GRGCYC | 1 cut(s) | 823 |
| BbsI | GAAGAC | 1 cut(s) | 51 |
| Bbv12I | GWGCWC | 2 cut(s) | 338, 823 |
| BbvI | GCAGC | 1 cut(s) | 125 |
| BccI | CCATC | 3 cut(s) | 554, 601, 833 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 571, 605 |
| BciT130I | CCWGG | 1 cut(s) | 306 |
| BfaI | CTAG | 3 cut(s) | 350, 983, 997 |
| BglII | AGATCT | 1 cut(s) | 949 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| BmcAI | AGTACT | 1 cut(s) | 937 |
| Bme1390I | CCNGG | 1 cut(s) | 306 |
| BmgT120I | GGNCC | 1 cut(s) | 842 |
| BmiI | GGNNCC | 1 cut(s) | 591 |
| BmrFI | CCNGG | 1 cut(s) | 306 |
| BmsI | GCATC | 3 cut(s) | 61, 336, 469 |
| BmtI | GCTAGC | 1 cut(s) | 353 |
| BpiI | GAAGAC | 1 cut(s) | 51 |
| BpmI | CTGGAG | 1 cut(s) | 807 |
| BsaHI | GRCGYC | 2 cut(s) | 253, 301 |
| BsaWI | WCCGGW | 1 cut(s) | 342 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 397 |
| BseAI | TCCGGA | 1 cut(s) | 342 |
| BseBI | CCWGG | 1 cut(s) | 306 |
| BseGI | GGATG | 2 cut(s) | 351, 757 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 397 |
| BseMII | CTCAG | 2 cut(s) | 472, 600 |
| BseRI | GAGGAG | 1 cut(s) | 306 |
| BseXI | GCAGC | 1 cut(s) | 125 |
| BseYI | CCCAGC | 1 cut(s) | 296 |
| BshFI | GGCC | 1 cut(s) | 843 |
| BshNI | GGYRCC | 1 cut(s) | 589 |
| BsiHKAI | GWGCWC | 2 cut(s) | 338, 823 |
| BsiSI | CCGG | 1 cut(s) | 343 |
| BslFI | GGGAC | 1 cut(s) | 541 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 397 |
| BsmFI | GGGAC | 1 cut(s) | 541 |
| BsmI | GAATGC | 1 cut(s) | 280 |
| BsnI | GGCC | 1 cut(s) | 843 |
| Bsp1286I | GDGCHC | 2 cut(s) | 338, 823 |
| Bsp13I | TCCGGA | 1 cut(s) | 342 |
| Bsp1407I | TGTACA | 1 cut(s) | 745 |
| Bsp143I | GATC | 1 cut(s) | 949 |
| BspANI | GGCC | 1 cut(s) | 843 |
| BspCNI | CTCAG | 2 cut(s) | 471, 601 |
| BspEI | TCCGGA | 1 cut(s) | 342 |
| BspLI | GGNNCC | 1 cut(s) | 591 |
| BspOI | GCTAGC | 1 cut(s) | 353 |
| BspT107I | GGYRCC | 1 cut(s) | 589 |
| BsrGI | TGTACA | 1 cut(s) | 745 |
| BssMI | GATC | 1 cut(s) | 949 |
| BssNAI | GTATAC | 1 cut(s) | 214 |
| BssNI | GRCGYC | 2 cut(s) | 253, 301 |
| Bst1107I | GTATAC | 1 cut(s) | 214 |
| Bst2UI | CCWGG | 1 cut(s) | 306 |
| Bst6I | CTCTTC | 1 cut(s) | 970 |
| BstACI | GRCGYC | 2 cut(s) | 253, 301 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 656 |
| BstAUI | TGTACA | 1 cut(s) | 745 |
| BstC8I | GCNNGC | 3 cut(s) | 351, 361, 721 |
| BstDEI | CTNAG | 4 cut(s) | 422, 458, 573, 609 |
| BstF5I | GGATG | 2 cut(s) | 351, 757 |
| BstHHI | GCGC | 1 cut(s) | 76 |
| BstKTI | GATC | 1 cut(s) | 952 |
| BstMBI | GATC | 1 cut(s) | 949 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 113, 365, 488, 656 |
| BstNI | CCWGG | 1 cut(s) | 306 |
| BstNSI | RCATGY | 4 cut(s) | 274, 363, 495, 965 |
| BstSCI | CCNGG | 1 cut(s) | 304 |
| BstV1I | GCAGC | 1 cut(s) | 125 |
| BstV2I | GAAGAC | 1 cut(s) | 51 |
| BstX2I | RGATCY | 1 cut(s) | 949 |
| BstYI | RGATCY | 1 cut(s) | 949 |
| BstZ17I | GTATAC | 1 cut(s) | 214 |
| BsuRI | GGCC | 1 cut(s) | 843 |
| BtgZI | GCGATG | 1 cut(s) | 596 |
| BtsCI | GGATG | 2 cut(s) | 351, 757 |
| BtsI | GCAGTG | 1 cut(s) | 354 |
| BtsIMutI | CAGTG | 1 cut(s) | 354 |
| Cac8I | GCNNGC | 3 cut(s) | 351, 361, 721 |
| CfoI | GCGC | 1 cut(s) | 76 |
| Cfr13I | GGNCC | 1 cut(s) | 842 |
| CseI | GACGC | 2 cut(s) | 242, 290 |
| Csp6I | GTAC | 4 cut(s) | 547, 746, 914, 936 |
| CviAII | CATG | 6 cut(s) | 156, 271, 360, 492, 712, 962 |
| CviQI | GTAC | 4 cut(s) | 547, 746, 914, 936 |
| DdeI | CTNAG | 4 cut(s) | 422, 458, 573, 609 |
| DpnI | GATC | 1 cut(s) | 951 |
| DpnII | GATC | 1 cut(s) | 949 |
| Eam1104I | CTCTTC | 1 cut(s) | 970 |
| EarI | CTCTTC | 1 cut(s) | 970 |
| Ecl136II | GAGCTC | 1 cut(s) | 821 |
| Eco24I | GRGCYC | 1 cut(s) | 823 |
| Eco53kI | GAGCTC | 1 cut(s) | 821 |
| EcoICRI | GAGCTC | 1 cut(s) | 821 |
| EcoRII | CCWGG | 1 cut(s) | 304 |
| EcoT38I | GRGCYC | 1 cut(s) | 823 |
| FaeI | CATG | 6 cut(s) | 159, 274, 363, 495, 715, 965 |
| FaqI | GGGAC | 1 cut(s) | 541 |
| FatI | CATG | 6 cut(s) | 155, 270, 359, 491, 711, 961 |
| FblI | GTMKAC | 1 cut(s) | 213 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| FokI | GGATG | 2 cut(s) | 358, 764 |
| FriOI | GRGCYC | 1 cut(s) | 823 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| FspBI | CTAG | 3 cut(s) | 350, 983, 997 |
| FspI | TGCGCA | 1 cut(s) | 75 |
| GlaI | GCGC | 1 cut(s) | 75 |
| GluI | GCNGC | 1 cut(s) | 114 |
| GsaI | CCCAGC | 1 cut(s) | 300 |
| GsuI | CTGGAG | 1 cut(s) | 807 |
| HaeIII | GGCC | 1 cut(s) | 843 |
| HapII | CCGG | 1 cut(s) | 343 |
| HgaI | GACGC | 2 cut(s) | 242, 290 |
| HhaI | GCGC | 1 cut(s) | 76 |
| Hin1I | GRCGYC | 2 cut(s) | 253, 301 |
| Hin1II | CATG | 6 cut(s) | 159, 274, 363, 495, 715, 965 |
| Hin6I | GCGC | 1 cut(s) | 74 |
| HinP1I | GCGC | 1 cut(s) | 74 |
| HinfI | GANTC | 7 cut(s) | 371, 383, 401, 418, 529, 695, 779 |
| HpaII | CCGG | 1 cut(s) | 343 |
| HphI | GGTGA | 2 cut(s) | 311, 492 |
| Hpy166II | GTNNAC | 2 cut(s) | 214, 916 |
| Hpy188I | TCNGA | 5 cut(s) | 233, 461, 602, 784, 909 |
| Hpy188III | TCNNGA | 2 cut(s) | 343, 972 |
| Hpy8I | GTNNAC | 2 cut(s) | 214, 916 |
| Hpy99I | CGWCG | 1 cut(s) | 240 |
| HpyCH4IV | ACGT | 2 cut(s) | 40, 238 |
| HpyCH4V | TGCA | 5 cut(s) | 270, 359, 659, 677, 723 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 113, 365, 488, 656 |
| HpyF3I | CTNAG | 4 cut(s) | 422, 458, 573, 609 |
| HpySE526I | ACGT | 2 cut(s) | 40, 238 |
| Hsp92I | GRCGYC | 2 cut(s) | 253, 301 |
| Hsp92II | CATG | 6 cut(s) | 159, 274, 363, 495, 715, 965 |
| HspAI | GCGC | 1 cut(s) | 74 |
| Kpn2I | TCCGGA | 1 cut(s) | 342 |
| Kzo9I | GATC | 1 cut(s) | 949 |
| LmnI | GCTCC | 1 cut(s) | 826 |
| Lsp1109I | GCAGC | 1 cut(s) | 125 |
| LweI | GCATC | 3 cut(s) | 61, 336, 469 |
| MaeI | CTAG | 3 cut(s) | 350, 983, 997 |
| MaeII | ACGT | 2 cut(s) | 40, 238 |
| MaeIII | GTNAC | 3 cut(s) | 239, 484, 498 |
| MalI | GATC | 1 cut(s) | 951 |
| MboI | GATC | 1 cut(s) | 949 |
| MboII | GAAGA | 5 cut(s) | 56, 65, 74, 96, 987 |
| MfeI | CAATTG | 1 cut(s) | 405 |
| MflI | RGATCY | 1 cut(s) | 949 |
| MhlI | GDGCHC | 2 cut(s) | 338, 823 |
| MluCI | AATT | 7 cut(s) | 4, 10, 99, 179, 326, 405, 876 |
| MlyI | GAGTC | 2 cut(s) | 523, 788 |
| MroI | TCCGGA | 1 cut(s) | 342 |
| MseI | TTAA | 4 cut(s) | 185, 377, 510, 858 |
| MslI | CAYNNNNRTG | 1 cut(s) | 160 |
| MspI | CCGG | 1 cut(s) | 343 |
| MspR9I | CCNGG | 1 cut(s) | 306 |
| MunI | CAATTG | 1 cut(s) | 405 |
| Mva1269I | GAATGC | 1 cut(s) | 280 |
| MvaI | CCWGG | 1 cut(s) | 306 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 113, 365, 488, 656 |
| NdeII | GATC | 1 cut(s) | 949 |
| NheI | GCTAGC | 1 cut(s) | 349 |
| NlaIII | CATG | 6 cut(s) | 159, 274, 363, 495, 715, 965 |
| NlaIV | GGNNCC | 1 cut(s) | 591 |
| NmeAIII | GCCGAG | 1 cut(s) | 344 |
| NmuCI | GTSAC | 2 cut(s) | 484, 498 |
| NsbI | TGCGCA | 1 cut(s) | 75 |
| NspI | RCATGY | 4 cut(s) | 274, 363, 495, 965 |
| PaeI | GCATGC | 1 cut(s) | 363 |
| PciI | ACATGT | 1 cut(s) | 961 |
| PctI | GAATGC | 1 cut(s) | 280 |
| PfeI | GAWTC | 5 cut(s) | 371, 383, 401, 418, 695 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PleI | GAGTC | 2 cut(s) | 523, 787 |
| PpsI | GAGTC | 2 cut(s) | 523, 787 |
| PscI | ACATGT | 1 cut(s) | 961 |
| PsiI | TTATAA | 2 cut(s) | 735, 771 |
| Psp124BI | GAGCTC | 1 cut(s) | 823 |
| Psp6I | CCWGG | 1 cut(s) | 304 |
| PspFI | CCCAGC | 1 cut(s) | 296 |
| PspGI | CCWGG | 1 cut(s) | 304 |
| PspN4I | GGNNCC | 1 cut(s) | 591 |
| PspPI | GGNCC | 1 cut(s) | 842 |
| PsuI | RGATCY | 1 cut(s) | 949 |
| RsaI | GTAC | 4 cut(s) | 548, 747, 915, 937 |
| RsaNI | GTAC | 4 cut(s) | 547, 746, 914, 936 |
| RseI | CAYNNNNRTG | 1 cut(s) | 160 |
| SacI | GAGCTC | 1 cut(s) | 823 |
| SaqAI | TTAA | 4 cut(s) | 185, 377, 510, 858 |
| SatI | GCNGC | 1 cut(s) | 114 |
| Sau3AI | GATC | 1 cut(s) | 949 |
| Sau96I | GGNCC | 1 cut(s) | 842 |
| ScaI | AGTACT | 1 cut(s) | 937 |
| SchI | GAGTC | 2 cut(s) | 523, 788 |
| ScrFI | CCNGG | 1 cut(s) | 306 |
| SduI | GDGCHC | 2 cut(s) | 338, 823 |
| SfaNI | GCATC | 3 cut(s) | 61, 336, 469 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 160 |
| SphI | GCATGC | 1 cut(s) | 363 |
| Sse9I | AATT | 7 cut(s) | 4, 10, 99, 179, 326, 405, 876 |
| SspMI | CTAG | 3 cut(s) | 350, 983, 997 |
| SstI | GAGCTC | 1 cut(s) | 823 |
| StyD4I | CCNGG | 1 cut(s) | 304 |
| TaiI | ACGT | 2 cut(s) | 43, 241 |
| TaqI | TCGA | 2 cut(s) | 427, 704 |
| TasI | AATT | 7 cut(s) | 4, 10, 99, 179, 326, 405, 876 |
| TatI | WGTACW | 2 cut(s) | 745, 935 |
| TfiI | GAWTC | 5 cut(s) | 371, 383, 401, 418, 695 |
| Tru1I | TTAA | 4 cut(s) | 185, 377, 510, 858 |
| Tru9I | TTAA | 4 cut(s) | 185, 377, 510, 858 |
| TscAI | CASTG | 1 cut(s) | 361 |
| TseFI | GTSAC | 2 cut(s) | 484, 498 |
| TseI | GCWGC | 1 cut(s) | 113 |
| Tsp45I | GTSAC | 2 cut(s) | 484, 498 |
| TspDTI | ATGAA | 8 cut(s) | 17, 75, 144, 189, 396, 630, 687, 807 |
| TspGWI | ACGGA | 1 cut(s) | 380 |
| TspRI | CASTG | 1 cut(s) | 361 |
| XapI | RAATTY | 1 cut(s) | 4 |
| XceI | RCATGY | 4 cut(s) | 274, 363, 495, 965 |
| XmiI | GTMKAC | 1 cut(s) | 213 |
| XspI | CTAG | 3 cut(s) | 350, 983, 997 |
| ZrmI | AGTACT | 1 cut(s) | 937 |