Plant transposon protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 303 |
| AclWI | GGATC | 3 cut(s) | 34, 55, 237 |
| AcuI | CTGAAG | 1 cut(s) | 72 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 68, 159, 160 |
| AgeI | ACCGGT | 1 cut(s) | 173 |
| AgsI | TTSAA | 3 cut(s) | 217, 275, 308 |
| AjnI | CCWGG | 2 cut(s) | 61, 153 |
| AlwI | GGATC | 3 cut(s) | 34, 55, 237 |
| AoxI | GGCC | 3 cut(s) | 30, 140, 150 |
| AsiGI | ACCGGT | 1 cut(s) | 173 |
| AspS9I | GGNCC | 3 cut(s) | 141, 151, 167 |
| AsuHPI | GGTGA | 2 cut(s) | 17, 188 |
| AvaII | GGWCC | 1 cut(s) | 167 |
| BccI | CCATC | 1 cut(s) | 197 |
| BciT130I | CCWGG | 2 cut(s) | 63, 155 |
| BfaI | CTAG | 1 cut(s) | 325 |
| BglII | AGATCT | 2 cut(s) | 280, 321 |
| Bme1390I | CCNGG | 2 cut(s) | 63, 155 |
| Bme18I | GGWCC | 1 cut(s) | 167 |
| BmgT120I | GGNCC | 3 cut(s) | 141, 151, 167 |
| BmrFI | CCNGG | 2 cut(s) | 63, 155 |
| BmsI | GCATC | 1 cut(s) | 229 |
| Bpu10I | CCTNAGC | 1 cut(s) | 67 |
| Bsa29I | ATCGAT | 1 cut(s) | 232 |
| BsaJI | CCNNGG | 5 cut(s) | 27, 43, 61, 144, 153 |
| BsaWI | WCCGGW | 1 cut(s) | 173 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 68, 159, 160 |
| Bse118I | RCCGGY | 1 cut(s) | 173 |
| BseBI | CCWGG | 2 cut(s) | 63, 155 |
| BseCI | ATCGAT | 1 cut(s) | 232 |
| BseDI | CCNNGG | 5 cut(s) | 27, 43, 61, 144, 153 |
| BseGI | GGATG | 1 cut(s) | 82 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 68, 159, 160 |
| BseMII | CTCAG | 1 cut(s) | 81 |
| Bsh1285I | CGRYCG | 1 cut(s) | 174 |
| BshFI | GGCC | 3 cut(s) | 32, 142, 152 |
| BshTI | ACCGGT | 1 cut(s) | 173 |
| BshVI | ATCGAT | 1 cut(s) | 232 |
| BsiEI | CGRYCG | 1 cut(s) | 174 |
| BsiSI | CCGG | 1 cut(s) | 174 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 68, 159, 160 |
| BsnI | GGCC | 3 cut(s) | 32, 142, 152 |
| Bsp143I | GATC | 6 cut(s) | 39, 47, 187, 229, 280, 321 |
| BspANI | GGCC | 3 cut(s) | 32, 142, 152 |
| BspCNI | CTCAG | 1 cut(s) | 80 |
| BspDI | ATCGAT | 1 cut(s) | 232 |
| BspPI | GGATC | 3 cut(s) | 34, 55, 237 |
| BsrFI | RCCGGY | 1 cut(s) | 173 |
| BssAI | RCCGGY | 1 cut(s) | 173 |
| BssECI | CCNNGG | 5 cut(s) | 27, 43, 61, 144, 153 |
| BssMI | GATC | 6 cut(s) | 39, 47, 187, 229, 280, 321 |
| BssT1I | CCWWGG | 3 cut(s) | 27, 43, 144 |
| Bst2UI | CCWGG | 2 cut(s) | 63, 155 |
| Bst4CI | ACNGT | 1 cut(s) | 260 |
| Bst6I | CTCTTC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 1 cut(s) | 67 |
| BstF5I | GGATG | 1 cut(s) | 82 |
| BstKTI | GATC | 6 cut(s) | 42, 50, 190, 232, 283, 324 |
| BstMBI | GATC | 6 cut(s) | 39, 47, 187, 229, 280, 321 |
| BstMCI | CGRYCG | 1 cut(s) | 174 |
| BstNI | CCWGG | 2 cut(s) | 63, 155 |
| BstSCI | CCNGG | 2 cut(s) | 61, 153 |
| BstX2I | RGATCY | 3 cut(s) | 47, 280, 321 |
| BstYI | RGATCY | 3 cut(s) | 47, 280, 321 |
| Bsu15I | ATCGAT | 1 cut(s) | 232 |
| BsuRI | GGCC | 3 cut(s) | 32, 142, 152 |
| BsuTUI | ATCGAT | 1 cut(s) | 232 |
| BtgZI | GCGATG | 1 cut(s) | 111 |
| BtsCI | GGATG | 1 cut(s) | 82 |
| Cfr10I | RCCGGY | 1 cut(s) | 173 |
| Cfr13I | GGNCC | 3 cut(s) | 141, 151, 167 |
| ClaI | ATCGAT | 1 cut(s) | 232 |
| CspAI | ACCGGT | 1 cut(s) | 173 |
| CviAII | CATG | 3 cut(s) | 191, 226, 316 |
| CviJI | RGCY | 4 cut(s) | 32, 66, 142, 152 |
| CviKI_1 | RGCY | 4 cut(s) | 32, 66, 142, 152 |
| DdeI | CTNAG | 1 cut(s) | 67 |
| DpnI | GATC | 6 cut(s) | 41, 49, 189, 231, 282, 323 |
| DpnII | GATC | 6 cut(s) | 39, 47, 187, 229, 280, 321 |
| Eam1104I | CTCTTC | 1 cut(s) | 117 |
| EarI | CTCTTC | 1 cut(s) | 117 |
| Eco130I | CCWWGG | 3 cut(s) | 27, 43, 144 |
| Eco147I | AGGCCT | 1 cut(s) | 32 |
| Eco47I | GGWCC | 1 cut(s) | 167 |
| Eco57I | CTGAAG | 1 cut(s) | 72 |
| EcoRII | CCWGG | 2 cut(s) | 61, 153 |
| EcoT14I | CCWWGG | 3 cut(s) | 27, 43, 144 |
| ErhI | CCWWGG | 3 cut(s) | 27, 43, 144 |
| FaeI | CATG | 3 cut(s) | 194, 229, 319 |
| FaiI | YATR | 5 cut(s) | 137, 192, 227, 237, 317 |
| FatI | CATG | 3 cut(s) | 190, 225, 315 |
| FokI | GGATG | 1 cut(s) | 89 |
| FspBI | CTAG | 1 cut(s) | 325 |
| HaeIII | GGCC | 3 cut(s) | 32, 142, 152 |
| HapII | CCGG | 1 cut(s) | 174 |
| Hin1II | CATG | 3 cut(s) | 194, 229, 319 |
| HinfI | GANTC | 2 cut(s) | 110, 222 |
| HpaII | CCGG | 1 cut(s) | 174 |
| HphI | GGTGA | 2 cut(s) | 17, 188 |
| Hpy166II | GTNNAC | 1 cut(s) | 256 |
| Hpy188I | TCNGA | 3 cut(s) | 52, 115, 285 |
| Hpy188III | TCNNGA | 4 cut(s) | 14, 69, 275, 298 |
| Hpy8I | GTNNAC | 1 cut(s) | 256 |
| HpyAV | CCTTC | 2 cut(s) | 158, 281 |
| HpyCH4III | ACNGT | 1 cut(s) | 260 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyF3I | CTNAG | 1 cut(s) | 67 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| Hsp92II | CATG | 3 cut(s) | 194, 229, 319 |
| Kzo9I | GATC | 6 cut(s) | 39, 47, 187, 229, 280, 321 |
| LpnPI | CCDG | 8 cut(s) | 48, 54, 75, 99, 140, 167, 187, 283 |
| LweI | GCATC | 1 cut(s) | 229 |
| MaeI | CTAG | 1 cut(s) | 325 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 2 cut(s) | 5, 260 |
| MalI | GATC | 6 cut(s) | 41, 49, 189, 231, 282, 323 |
| MboI | GATC | 6 cut(s) | 39, 47, 187, 229, 280, 321 |
| MboII | GAAGA | 3 cut(s) | 131, 134, 290 |
| MflI | RGATCY | 3 cut(s) | 47, 280, 321 |
| MluCI | AATT | 1 cut(s) | 22 |
| MlyI | GAGTC | 1 cut(s) | 119 |
| MnlI | CCTC | 4 cut(s) | 65, 94, 118, 132 |
| MspI | CCGG | 1 cut(s) | 174 |
| MspR9I | CCNGG | 2 cut(s) | 63, 155 |
| MvaI | CCWGG | 2 cut(s) | 63, 155 |
| NdeII | GATC | 6 cut(s) | 39, 47, 187, 229, 280, 321 |
| NlaIII | CATG | 3 cut(s) | 194, 229, 319 |
| NmuCI | GTSAC | 2 cut(s) | 5, 260 |
| PceI | AGGCCT | 1 cut(s) | 32 |
| PfeI | GAWTC | 1 cut(s) | 222 |
| PinAI | ACCGGT | 1 cut(s) | 173 |
| PleI | GAGTC | 1 cut(s) | 118 |
| PpsI | GAGTC | 1 cut(s) | 118 |
| Psp1406I | AACGTT | 1 cut(s) | 303 |
| Psp6I | CCWGG | 2 cut(s) | 61, 153 |
| PspGI | CCWGG | 2 cut(s) | 61, 153 |
| PspPI | GGNCC | 3 cut(s) | 141, 151, 167 |
| PsuI | RGATCY | 3 cut(s) | 47, 280, 321 |
| Sau3AI | GATC | 6 cut(s) | 39, 47, 187, 229, 280, 321 |
| Sau96I | GGNCC | 3 cut(s) | 141, 151, 167 |
| SchI | GAGTC | 1 cut(s) | 119 |
| ScrFI | CCNGG | 2 cut(s) | 63, 155 |
| SetI | ASST | 4 cut(s) | 150, 159, 273, 306 |
| SfaNI | GCATC | 1 cut(s) | 229 |
| SinI | GGWCC | 1 cut(s) | 167 |
| Sse9I | AATT | 1 cut(s) | 22 |
| SseBI | AGGCCT | 1 cut(s) | 32 |
| SspMI | CTAG | 1 cut(s) | 325 |
| StuI | AGGCCT | 1 cut(s) | 32 |
| StyD4I | CCNGG | 2 cut(s) | 61, 153 |
| StyI | CCWWGG | 3 cut(s) | 27, 43, 144 |
| TaaI | ACNGT | 1 cut(s) | 260 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TaqI | TCGA | 2 cut(s) | 186, 232 |
| TaqII | GACCGA | 1 cut(s) | 184 |
| TasI | AATT | 1 cut(s) | 22 |
| TfiI | GAWTC | 1 cut(s) | 222 |
| TseFI | GTSAC | 2 cut(s) | 5, 260 |
| Tsp45I | GTSAC | 2 cut(s) | 5, 260 |
| TspDTI | ATGAA | 3 cut(s) | 93, 132, 214 |
| TspGWI | ACGGA | 1 cut(s) | 234 |
| VpaK11BI | GGWCC | 1 cut(s) | 167 |
| XspI | CTAG | 1 cut(s) | 325 |