AT2G16890

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0002313
Physical Location & Seq
Forward (+)
7316789 .. 7319243
2455 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G16890.2

Sequence Viewer

Length: 939 bp
ATGTCCGTTTCAACACATCACCACCACGTGGTCCTCTTCCCTTTCATGTCAAAAGGCCACATCATCCCTCTCCTCCAATTCGGTCGTCTCCTCCTCCGTCACCACCGCAAAGAACCAACCATCACCGTCACCGTTTTCACCACTCCCAAGAACCAACCTTTCATCTCAGACTTCCTCTCGGATACGCCGGAGATCAAAGTCATCTCTCTCCCTTTCCCGGAAAACATCACCGGAATCCCTCCCGGCGTCGAGAACACCGAAAAGCTCCCATCCATGTCACTTTTCGTCCCCTTCACACGCGCCACGAAGCTTCTCCAACCTTTCTTCGAAGAAACACTCAAGACTCTTCCAAAAGTTTCGTTCATGGTCTCTGATGGATTCCTCTGGTGGACATCGGAGTCTGCAGCTAAGTTCAACATTCCAAGATTTGTCTCCTACGGCATGAACTCTTACTCCGCCGCTGTCTCCATCTCTGTTTTCAAACACGAACTCTTTACCGAACCGGAAAGTAAATCTGATACCGAACCGGTCACTGTACCAGACTTTCCATGGATCAAGGTCAAGAAGTGTGATTTCGACCATGGCACTACCGAGCCGGAAGAATCAGGTGCAGCCCTCGAACTATCTATGGACCAAATCAAGTCGACCACCACAAGCCATGGGTTTTTAGTCAATAGCTTCTACGAGCTCGAGTCAGCATTTGTTGATTACAACAACAACTCTGGTGATAAACCAAAGTCGTGGTGTGTTGGGCCACTGTGTTTGACAGATCCTCCTAAACAGGGGAGTGCTAAACCGGCTTGGATTCATTGGTTGGATCAGAAGCGAGAGGAAGGGCGTCCGGTTTTGTACGTGGCGTTTGGAACGCAGGCAGAGATATCGAACAAGCAGCTTATGGAACTAGCTTTCGGCTTGGAAGATTCAAAGGTACGTACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

312

Amino Acids

35.19

Weight (kDa)

6.01

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 281 - 444 2e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 397
AccB7I CCANNNNNTGG 1 cut(s) 28
AccI GTMKAC 1 cut(s) 644
AccII CGCG 1 cut(s) 300
AciI CCGC 3 cut(s) 106, 456, 459
AclWI GGATC 3 cut(s) 560, 764, 825
AcvI CACGTG 1 cut(s) 28
AcyI GRCGYC 2 cut(s) 246, 838
AdeI CACNNNGTG 1 cut(s) 28
AfaI GTAC 4 cut(s) 537, 851, 930, 934
AfiI CCNNNNNNNGG 3 cut(s) 28, 217, 782
AgeI ACCGGT 1 cut(s) 526
AgsI TTSAA 4 cut(s) 12, 415, 481, 924
AloI GAACNNNNNNTCC 2 cut(s) 437, 469
AluBI AGCT 7 cut(s) 265, 310, 407, 678, 688, 892, 905
AluI AGCT 7 cut(s) 265, 310, 407, 678, 688, 892, 905
Alw21I GWGCWC 1 cut(s) 690
Alw26I GTCTC 4 cut(s) 92, 373, 436, 469
AlwI GGATC 3 cut(s) 560, 764, 825
Ama87I CYCGRG 1 cut(s) 689
AoxI GGCC 2 cut(s) 55, 752
ApeKI GCWGC 3 cut(s) 404, 611, 889
AsiGI ACCGGT 1 cut(s) 526
AspLEI GCGC 1 cut(s) 302
AspS9I GGNCC 3 cut(s) 31, 631, 752
AsuC2I CCSGG 2 cut(s) 218, 243
AsuHPI GGTGA 7 cut(s) 11, 92, 115, 121, 130, 220, 737
AsuII TTCGAA 1 cut(s) 327
AvaI CYCGRG 1 cut(s) 689
AvaII GGWCC 2 cut(s) 31, 631
BaeI ACNNNNGTAYC 1 cut(s) 920
BanII GRGCYC 1 cut(s) 690
BbrPI CACGTG 1 cut(s) 28
Bbv12I GWGCWC 1 cut(s) 690
BbvI GCAGC 3 cut(s) 416, 623, 901
BccI CCATC 4 cut(s) 128, 277, 368, 476
BceAI ACGGC 1 cut(s) 454
BcgI CGANNNNNNTGC 2 cut(s) 861, 895
BciVI GTATCC 1 cut(s) 175
BcnI CCSGG 2 cut(s) 218, 243
BcoDI GTCTC 4 cut(s) 92, 373, 436, 469
BfaI CTAG 1 cut(s) 902
BfmI CTRYAG 1 cut(s) 402
BfuI GTATCC 1 cut(s) 175
BisI GCNGC 4 cut(s) 405, 459, 612, 890
BlsI GCNGC 4 cut(s) 406, 460, 613, 891
Bme1390I CCNGG 2 cut(s) 218, 243
Bme18I GGWCC 2 cut(s) 31, 631
BmeT110I CYCGRG 1 cut(s) 689
BmgT120I GGNCC 3 cut(s) 31, 631, 752
BmrFI CCNGG 2 cut(s) 218, 243
Bpu14I TTCGAA 1 cut(s) 327
BpuEI CTTGAG 1 cut(s) 323
BpuMI CCSGG 2 cut(s) 218, 243
BsaAI YACGTR 4 cut(s) 28, 853, 932, 936
BsaHI GRCGYC 2 cut(s) 246, 838
BsaI GGTCTC 1 cut(s) 373
BsaJI CCNNGG 3 cut(s) 548, 580, 658
BsaWI WCCGGW 4 cut(s) 230, 502, 526, 841
BsaXI ACNNNNNCTCC 4 cut(s) 437, 467, 757, 787
Bsc4I CCNNNNNNNGG 3 cut(s) 28, 217, 782
Bse118I RCCGGY 2 cut(s) 526, 796
BseDI CCNNGG 3 cut(s) 548, 580, 658
BseGI GGATG 2 cut(s) 63, 269
BseLI CCNNNNNNNGG 3 cut(s) 28, 217, 782
BseMII CTCAG 1 cut(s) 180
BseRI GAGGAG 3 cut(s) 62, 80, 83
BseXI GCAGC 3 cut(s) 416, 623, 901
BsgI GTGCAG 1 cut(s) 630
Bsh1236I CGCG 1 cut(s) 300
Bsh1285I CGRYCG 1 cut(s) 85
BshFI GGCC 2 cut(s) 57, 754
BshTI ACCGGT 1 cut(s) 526
BsiEI CGRYCG 1 cut(s) 85
BsiHKAI GWGCWC 1 cut(s) 690
BsiHKCI CYCGRG 1 cut(s) 689
BsiSI CCGG 9 cut(s) 188, 218, 231, 243, 503, 527, 596, 797, 842
BsiWI CGTACG 1 cut(s) 932
BslFI GGGAC 1 cut(s) 272
BslI CCNNNNNNNGG 3 cut(s) 28, 217, 782
BsmAI GTCTC 4 cut(s) 92, 373, 436, 469
BsmBI CGTCTC 1 cut(s) 92
BsmFI GGGAC 1 cut(s) 272
BsnI GGCC 2 cut(s) 57, 754
Bso31I GGTCTC 1 cut(s) 373
BsoBI CYCGRG 1 cut(s) 689
Bsp119I TTCGAA 1 cut(s) 327
Bsp1286I GDGCHC 1 cut(s) 690
Bsp143I GATC 4 cut(s) 192, 552, 769, 817
Bsp19I CCATGG 3 cut(s) 548, 580, 658
BspACI CCGC 3 cut(s) 106, 456, 459
BspANI GGCC 2 cut(s) 57, 754
BspCNI CTCAG 1 cut(s) 179
BspFNI CGCG 1 cut(s) 300
BspMAI CTGCAG 1 cut(s) 406
BspPI GGATC 3 cut(s) 560, 764, 825
BspT104I TTCGAA 1 cut(s) 327
BspTNI GGTCTC 1 cut(s) 373
BsrFI RCCGGY 2 cut(s) 526, 796
BssAI RCCGGY 2 cut(s) 526, 796
BssECI CCNNGG 3 cut(s) 548, 580, 658
BssMI GATC 4 cut(s) 192, 552, 769, 817
BssNI GRCGYC 2 cut(s) 246, 838
BssT1I CCWWGG 3 cut(s) 548, 580, 658
Bst4CI ACNGT 4 cut(s) 127, 133, 535, 759
Bst6I CTCTTC 2 cut(s) 41, 351
BstACI GRCGYC 2 cut(s) 246, 838
BstBAI YACGTR 4 cut(s) 28, 853, 932, 936
BstBI TTCGAA 1 cut(s) 327
BstC8I GCNNGC 1 cut(s) 870
BstDEI CTNAG 2 cut(s) 166, 408
BstDSI CCRYGG 3 cut(s) 548, 580, 658
BstF5I GGATG 2 cut(s) 63, 269
BstFNI CGCG 1 cut(s) 300
BstHHI GCGC 1 cut(s) 302
BstKTI GATC 4 cut(s) 195, 555, 772, 820
BstMAI GTCTC 4 cut(s) 92, 373, 436, 469
BstMBI GATC 4 cut(s) 192, 552, 769, 817
BstMCI CGRYCG 1 cut(s) 85
BstMWI GCNNNNNNNGC 1 cut(s) 797
BstSCI CCNGG 2 cut(s) 216, 241
BstSFI CTRYAG 1 cut(s) 402
BstSNI TACGTA 2 cut(s) 932, 936
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 3 cut(s) 416, 623, 901
BstX2I RGATCY 1 cut(s) 769
BstXI CCANNNNNNTGG 1 cut(s) 741
BstYI RGATCY 1 cut(s) 769
BsuI GTATCC 1 cut(s) 175
BsuRI GGCC 2 cut(s) 57, 754
BtgI CCRYGG 3 cut(s) 548, 580, 658
BtsCI GGATG 2 cut(s) 63, 269
BtsIMutI CAGTG 2 cut(s) 531, 755
Cac8I GCNNGC 1 cut(s) 870
CfoI GCGC 1 cut(s) 302
Cfr10I RCCGGY 2 cut(s) 526, 796
Cfr13I GGNCC 3 cut(s) 31, 631, 752
CseI GACGC 2 cut(s) 235, 827
Csp6I GTAC 4 cut(s) 536, 850, 929, 933
CspAI ACCGGT 1 cut(s) 526
CspCI CAANNNNNGTGG 2 cut(s) 744, 779
CviAII CATG 7 cut(s) 46, 274, 364, 442, 549, 581, 659
CviQI GTAC 4 cut(s) 536, 850, 929, 933
DdeI CTNAG 2 cut(s) 166, 408
DpnI GATC 4 cut(s) 194, 554, 771, 819
DpnII GATC 4 cut(s) 192, 552, 769, 817
DraIII CACNNNGTG 1 cut(s) 28
DrdI GACNNNNNNGTC 1 cut(s) 397
DseDI GACNNNNNNGTC 1 cut(s) 397
Eam1104I CTCTTC 2 cut(s) 41, 351
EarI CTCTTC 2 cut(s) 41, 351
EciI GGCGGA 1 cut(s) 445
Ecl136II GAGCTC 1 cut(s) 688
Eco105I TACGTA 2 cut(s) 932, 936
Eco130I CCWWGG 3 cut(s) 548, 580, 658
Eco24I GRGCYC 1 cut(s) 690
Eco31I GGTCTC 1 cut(s) 373
Eco32I GATATC 1 cut(s) 879
Eco47I GGWCC 2 cut(s) 31, 631
Eco53kI GAGCTC 1 cut(s) 688
Eco72I CACGTG 1 cut(s) 28
Eco88I CYCGRG 1 cut(s) 689
EcoICRI GAGCTC 1 cut(s) 688
EcoRV GATATC 1 cut(s) 879
EcoT14I CCWWGG 3 cut(s) 548, 580, 658
EcoT38I GRGCYC 1 cut(s) 690
ErhI CCWWGG 3 cut(s) 548, 580, 658
Esp3I CGTCTC 1 cut(s) 92
FaeI CATG 7 cut(s) 49, 277, 367, 445, 552, 584, 662
FaiI YATR 9 cut(s) 47, 275, 365, 443, 550, 582, 629, 660, 896
FaqI GGGAC 1 cut(s) 272
FatI CATG 7 cut(s) 45, 273, 363, 441, 548, 580, 658
FblI GTMKAC 1 cut(s) 644
Fnu4HI GCNGC 4 cut(s) 405, 459, 612, 890
FokI GGATG 2 cut(s) 50, 256
FriOI GRGCYC 1 cut(s) 690
Fsp4HI GCNGC 4 cut(s) 405, 459, 612, 890
FspBI CTAG 1 cut(s) 902
GlaI GCGC 1 cut(s) 301
GluI GCNGC 4 cut(s) 405, 459, 612, 890
HaeIII GGCC 2 cut(s) 57, 754
HapII CCGG 9 cut(s) 188, 218, 231, 243, 503, 527, 596, 797, 842
HgaI GACGC 2 cut(s) 235, 827
HhaI GCGC 1 cut(s) 302
Hin1I GRCGYC 2 cut(s) 246, 838
Hin1II CATG 7 cut(s) 49, 277, 367, 445, 552, 584, 662
Hin6I GCGC 1 cut(s) 300
HinP1I GCGC 1 cut(s) 300
HincII GTYRAC 1 cut(s) 645
HindII GTYRAC 1 cut(s) 645
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 8 cut(s) 234, 343, 378, 398, 602, 692, 805, 920
HpaII CCGG 9 cut(s) 188, 218, 231, 243, 503, 527, 596, 797, 842
HphI GGTGA 7 cut(s) 11, 92, 115, 121, 130, 220, 737
Hpy166II GTNNAC 2 cut(s) 390, 645
Hpy188I TCNGA 6 cut(s) 169, 181, 373, 397, 517, 822
Hpy188III TCNNGA 3 cut(s) 250, 340, 562
Hpy8I GTNNAC 2 cut(s) 390, 645
Hpy99I CGWCG 1 cut(s) 251
HpyAV CCTTC 2 cut(s) 301, 827
HpyCH4III ACNGT 4 cut(s) 127, 133, 535, 759
HpyCH4IV ACGT 4 cut(s) 27, 852, 931, 935
HpyCH4V TGCA 2 cut(s) 404, 611
HpyF10VI GCNNNNNNNGC 1 cut(s) 797
HpyF3I CTNAG 2 cut(s) 166, 408
HpySE526I ACGT 4 cut(s) 27, 852, 931, 935
Hsp92I GRCGYC 2 cut(s) 246, 838
Hsp92II CATG 7 cut(s) 49, 277, 367, 445, 552, 584, 662
HspAI GCGC 1 cut(s) 300
Kzo9I GATC 4 cut(s) 192, 552, 769, 817
LmnI GCTCC 1 cut(s) 270
Lsp1109I GCAGC 3 cut(s) 416, 623, 901
MaeI CTAG 1 cut(s) 902
MaeII ACGT 4 cut(s) 27, 852, 931, 935
MaeIII GTNAC 4 cut(s) 98, 127, 276, 529
MalI GATC 4 cut(s) 194, 554, 771, 819
MboI GATC 4 cut(s) 192, 552, 769, 817
MboII GAAGA 6 cut(s) 28, 316, 338, 341, 611, 929
MflI RGATCY 1 cut(s) 769
MhlI GDGCHC 1 cut(s) 690
MluCI AATT 1 cut(s) 77
MlyI GAGTC 3 cut(s) 337, 407, 701
MmeI TCCRAC 2 cut(s) 340, 795
MspA1I CMGCKG 1 cut(s) 461
MspI CCGG 9 cut(s) 188, 218, 231, 243, 503, 527, 596, 797, 842
MspR9I CCNGG 2 cut(s) 218, 243
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 1 cut(s) 797
NciI CCSGG 2 cut(s) 218, 243
NcoI CCATGG 3 cut(s) 548, 580, 658
NdeII GATC 4 cut(s) 192, 552, 769, 817
NlaIII CATG 7 cut(s) 49, 277, 367, 445, 552, 584, 662
NmuCI GTSAC 4 cut(s) 98, 127, 276, 529
NspV TTCGAA 1 cut(s) 327
PaeR7I CTCGAG 1 cut(s) 689
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PfeI GAWTC 5 cut(s) 234, 378, 602, 805, 920
Pfl23II CGTACG 1 cut(s) 932
PflMI CCANNNNNTGG 1 cut(s) 28
PfoI TCCNGGA 1 cut(s) 216
PinAI ACCGGT 1 cut(s) 526
PkrI GCNGC 4 cut(s) 406, 460, 613, 891
PleI GAGTC 3 cut(s) 337, 406, 700
PmaCI CACGTG 1 cut(s) 28
PmlI CACGTG 1 cut(s) 28
PpsI GAGTC 3 cut(s) 337, 406, 700
Ppu21I YACGTR 4 cut(s) 28, 853, 932, 936
Psp124BI GAGCTC 1 cut(s) 690
PspCI CACGTG 1 cut(s) 28
PspLI CGTACG 1 cut(s) 932
PspPI GGNCC 3 cut(s) 31, 631, 752
PspXI VCTCGAGB 1 cut(s) 689
PstI CTGCAG 1 cut(s) 406
PsuI RGATCY 1 cut(s) 769
RsaI GTAC 4 cut(s) 537, 851, 930, 934
RsaNI GTAC 4 cut(s) 536, 850, 929, 933
SacI GAGCTC 1 cut(s) 690
SalI GTCGAC 1 cut(s) 643
SatI GCNGC 4 cut(s) 405, 459, 612, 890
Sau3AI GATC 4 cut(s) 192, 552, 769, 817
Sau96I GGNCC 3 cut(s) 31, 631, 752
SchI GAGTC 3 cut(s) 337, 407, 701
ScrFI CCNGG 2 cut(s) 218, 243
SduI GDGCHC 1 cut(s) 690
SfcI CTRYAG 1 cut(s) 402
Sfr274I CTCGAG 1 cut(s) 689
SfuI TTCGAA 1 cut(s) 327
SinI GGWCC 2 cut(s) 31, 631
SlaI CTCGAG 1 cut(s) 689
SmlI CTYRAG 2 cut(s) 338, 689
SmoI CTYRAG 2 cut(s) 338, 689
SnaBI TACGTA 2 cut(s) 932, 936
Sse9I AATT 1 cut(s) 77
SsiI CCGC 3 cut(s) 106, 456, 459
SspMI CTAG 1 cut(s) 902
SstI GAGCTC 1 cut(s) 690
StyD4I CCNGG 2 cut(s) 216, 241
StyI CCWWGG 3 cut(s) 548, 580, 658
TaaI ACNGT 4 cut(s) 127, 133, 535, 759
TaiI ACGT 4 cut(s) 30, 855, 934, 938
TaqI TCGA 7 cut(s) 249, 327, 576, 618, 644, 690, 881
TaqII GACCGA 1 cut(s) 71
TasI AATT 1 cut(s) 77
TauI GCSGC 1 cut(s) 461
TfiI GAWTC 5 cut(s) 234, 378, 602, 805, 920
TscAI CASTG 2 cut(s) 538, 762
TseFI GTSAC 4 cut(s) 98, 127, 276, 529
TseI GCWGC 3 cut(s) 404, 611, 889
Tsp45I GTSAC 4 cut(s) 98, 127, 276, 529
TspDTI ATGAA 5 cut(s) 34, 151, 352, 458, 797
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 2 cut(s) 538, 762
Van91I CCANNNNNTGG 1 cut(s) 28
VpaK11BI GGWCC 2 cut(s) 31, 631
XcmI CCANNNNNNNNNTGG 1 cut(s) 546
XhoI CTCGAG 1 cut(s) 689
XmiI GTMKAC 1 cut(s) 644
XspI CTAG 1 cut(s) 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.