Rh2BG636200

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0002313
Physical Location & Seq
Reverse (-)
85694561 .. 85694959
399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG636200.1

Sequence Viewer

Length: 399 bp
ATGGTGGTCAGCGAGTGGGTTAACCAGACGGAGATACTTAACCACGAGAGCGTGGAGGGTTTTTTGAGTCATTGCGGGTGGAACTCGGTGATGGAGGCCATTTGCGCCGGAGTACCGATTCTGGCGTGGCCAATGATGGCGGAGCAGCCGCTGAATGCGAGGATGGTGGTGGAGGAGATAAAGGTTGGTTTGAGAGTGGAGACGTGCGACGGGTCGGTTAGGGGGTTTGTGAAGGCGGAGGGGCTTGAGAAGATGGTGAAGAAGTTGATGGAGGGGGAGGTGGTGAGGAAGAAGGTGAAGGAGGTTGGTGAGGTGGCGAGGAACGCGGTGGAGGAGGGCGGGTCCTCGTGGCGGACGTTGGGGTTGCTCATTGATGAGGTATGCAGTAAAGAAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

132

Amino Acids

14.6

Weight (kDa)

5.03

Isoelectric Point (pI)

31.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 3 - 100 1.3e-15 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 326
AciI CCGC 7 cut(s) 75, 140, 149, 236, 326, 339, 352
AcoI YGGCCR 1 cut(s) 128
AfaI GTAC 1 cut(s) 114
AfiI CCNNNNNNNGG 1 cut(s) 351
AjiI CACGTC 1 cut(s) 204
Alw26I GTCTC 1 cut(s) 194
AlwNI CAGNNNCTG 1 cut(s) 151
AoxI GGCC 2 cut(s) 96, 128
ApeKI GCWGC 1 cut(s) 145
AspLEI GCGC 1 cut(s) 107
AspS9I GGNCC 1 cut(s) 342
AsuHPI GGTGA 5 cut(s) 100, 268, 295, 307, 320
AvaII GGWCC 1 cut(s) 342
BalI TGGCCA 1 cut(s) 130
BauI CACGAG 2 cut(s) 44, 346
BbvI GCAGC 1 cut(s) 157
BccI CCATC 5 cut(s) 85, 130, 157, 247, 262
BcoDI GTCTC 1 cut(s) 194
BfaI CTAG 1 cut(s) 397
BisI GCNGC 2 cut(s) 146, 149
BlsI GCNGC 2 cut(s) 147, 150
Bme18I GGWCC 1 cut(s) 342
BmgBI CACGTC 1 cut(s) 204
BmgT120I GGNCC 1 cut(s) 342
BmiI GGNNCC 1 cut(s) 343
BpuEI CTTGAG 1 cut(s) 266
BsaXI ACNNNNNCTCC 2 cut(s) 326, 356
Bsc4I CCNNNNNNNGG 1 cut(s) 351
Bse3DI GCAATG 1 cut(s) 70
BseGI GGATG 1 cut(s) 168
BseLI CCNNNNNNNGG 1 cut(s) 351
BseMI GCAATG 1 cut(s) 70
BseRI GAGGAG 2 cut(s) 188, 347
BseXI GCAGC 1 cut(s) 157
Bsh1236I CGCG 1 cut(s) 326
BshFI GGCC 2 cut(s) 98, 130
BsiSI CCGG 1 cut(s) 108
BslI CCNNNNNNNGG 1 cut(s) 351
BsmAI GTCTC 1 cut(s) 194
BsmBI CGTCTC 1 cut(s) 194
BsmI GAATGC 1 cut(s) 160
BsnI GGCC 2 cut(s) 98, 130
BspACI CCGC 7 cut(s) 75, 140, 149, 236, 326, 339, 352
BspANI GGCC 2 cut(s) 98, 130
BspFNI CGCG 1 cut(s) 326
BspLI GGNNCC 1 cut(s) 343
BsrDI GCAATG 1 cut(s) 70
BssSI CACGAG 2 cut(s) 44, 346
Bst2BI CACGAG 2 cut(s) 44, 346
BstF5I GGATG 1 cut(s) 168
BstFNI CGCG 1 cut(s) 326
BstHHI GCGC 1 cut(s) 107
BstMAI GTCTC 1 cut(s) 194
BstMWI GCNNNNNNNGC 2 cut(s) 104, 323
BstUI CGCG 1 cut(s) 326
BstV1I GCAGC 1 cut(s) 157
BsuRI GGCC 2 cut(s) 98, 130
BtrI CACGTC 1 cut(s) 204
BtsCI GGATG 1 cut(s) 168
CaiI CAGNNNCTG 1 cut(s) 151
CfoI GCGC 1 cut(s) 107
Cfr13I GGNCC 1 cut(s) 342
Csp6I GTAC 1 cut(s) 113
CviJI RGCY 4 cut(s) 98, 130, 148, 244
CviKI_1 RGCY 4 cut(s) 98, 130, 148, 244
CviQI GTAC 1 cut(s) 113
EaeI YGGCCR 1 cut(s) 128
EciI GGCGGA 3 cut(s) 155, 251, 367
Eco47I GGWCC 1 cut(s) 342
EcoO109I RGGNCCY 1 cut(s) 342
Esp3I CGTCTC 1 cut(s) 194
FaiI YATR 1 cut(s) 382
FauI CCCGC 2 cut(s) 68, 332
Fnu4HI GCNGC 2 cut(s) 146, 149
FokI GGATG 1 cut(s) 175
Fsp4HI GCNGC 2 cut(s) 146, 149
FspBI CTAG 1 cut(s) 397
GlaI GCGC 1 cut(s) 106
GluI GCNGC 2 cut(s) 146, 149
HaeIII GGCC 2 cut(s) 98, 130
HapII CCGG 1 cut(s) 108
HhaI GCGC 1 cut(s) 107
Hin6I GCGC 1 cut(s) 105
HinP1I GCGC 1 cut(s) 105
HincII GTYRAC 1 cut(s) 22
HindII GTYRAC 1 cut(s) 22
HinfI GANTC 2 cut(s) 67, 118
HpaI GTTAAC 1 cut(s) 22
HpaII CCGG 1 cut(s) 108
HphI GGTGA 5 cut(s) 100, 268, 295, 307, 320
Hpy166II GTNNAC 1 cut(s) 22
Hpy8I GTNNAC 1 cut(s) 22
Hpy99I CGWCG 1 cut(s) 212
HpyAV CCTTC 3 cut(s) 226, 286, 292
HpyCH4IV ACGT 2 cut(s) 203, 356
HpyCH4V TGCA 1 cut(s) 384
HpyF10VI GCNNNNNNNGC 2 cut(s) 104, 323
HpySE526I ACGT 2 cut(s) 203, 356
HspAI GCGC 1 cut(s) 105
KspAI GTTAAC 1 cut(s) 22
LmnI GCTCC 1 cut(s) 142
LpnPI CCDG 3 cut(s) 38, 107, 121
Lsp1109I GCAGC 1 cut(s) 157
MaeI CTAG 1 cut(s) 397
MaeII ACGT 2 cut(s) 203, 356
MboII GAAGA 3 cut(s) 262, 271, 301
MlsI TGGCCA 1 cut(s) 130
MluNI TGGCCA 1 cut(s) 130
MlyI GAGTC 1 cut(s) 76
Mox20I TGGCCA 1 cut(s) 130
MscI TGGCCA 1 cut(s) 130
MseI TTAA 2 cut(s) 21, 39
Msp20I TGGCCA 1 cut(s) 130
MspA1I CMGCKG 1 cut(s) 151
MspI CCGG 1 cut(s) 108
Mva1269I GAATGC 1 cut(s) 160
MvnI CGCG 1 cut(s) 326
MwoI GCNNNNNNNGC 2 cut(s) 104, 323
NlaIV GGNNCC 1 cut(s) 343
PcsI WCGNNNNNNNCGW 1 cut(s) 353
PctI GAATGC 1 cut(s) 160
PfeI GAWTC 1 cut(s) 118
PkrI GCNGC 2 cut(s) 147, 150
PleI GAGTC 1 cut(s) 75
PpsI GAGTC 1 cut(s) 75
PpuMI RGGWCCY 1 cut(s) 342
Psp5II RGGWCCY 1 cut(s) 342
PspN4I GGNNCC 1 cut(s) 343
PspPI GGNCC 1 cut(s) 342
PspPPI RGGWCCY 1 cut(s) 342
PstNI CAGNNNCTG 1 cut(s) 151
RsaI GTAC 1 cut(s) 114
RsaNI GTAC 1 cut(s) 113
SaqAI TTAA 2 cut(s) 21, 39
SatI GCNGC 2 cut(s) 146, 149
Sau96I GGNCC 1 cut(s) 342
SchI GAGTC 1 cut(s) 76
SetI ASST 8 cut(s) 186, 206, 282, 297, 306, 315, 359, 381
SinI GGWCC 1 cut(s) 342
SmlI CTYRAG 1 cut(s) 245
SmoI CTYRAG 1 cut(s) 245
SsiI CCGC 7 cut(s) 75, 140, 149, 236, 326, 339, 352
SspMI CTAG 1 cut(s) 397
TaiI ACGT 2 cut(s) 206, 359
TauI GCSGC 1 cut(s) 151
TfiI GAWTC 1 cut(s) 118
Tru1I TTAA 2 cut(s) 21, 39
Tru9I TTAA 2 cut(s) 21, 39
TseI GCWGC 1 cut(s) 145
TspGWI ACGGA 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 342
XspI CTAG 1 cut(s) 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.