RLG00000021998

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
79834843 .. 79836270
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021998

Sequence Viewer

Length: 1362 bp
ATGGGTTCATATTCCCCTACCAATATTCCATCAGAGCCACCGCAACGCCGCCATGTTGTTCTGTTCCCTTTCATGTCCAAAGGCCACACCATCCCACTCCTCCACCTCTCCCGCCTCCTCCTCTCCCGCGGCCTCGCCGTAACCGTCTTCACCACCCCGGCCAACCGCCCCTTCATCGACCAATTCCTCTACGGCACGACCGCCGCCTCCGTCGTAGACATCCCTTTCCCTCAAAACATCCACCCCGAAATCCCCGCCGCCGTCGAGAGCACAGACAAGCTCTCCTCCGTCGACGAACGCCTCTTCTACCCCTTCGCGCTCGCCACAAAACACATGCAAGCTGACTTCGAGAAAGCTCTAGGCTCTCTTCCACGTGTCAGCTTCATGGTCTCCGACTCCTTCCTCTGGTGGACGCTAGACTCTGCCACCAAGTTCGGCTTCCCGAGGCTCGCCTTCTACGGCTTCAACAACTACGCCGGCTCCGTGACCAGATTCGTCGCCCAGAATGGCCTCCTCCACGGCCCCGAGTCCGATAACGAAAACCATAGTCCTGAAGGCTCGGAGTTTCTCATGAACGTCGTGGGAGCCGTCGTTAACAGCTTCGCCGTTGTCACAAACAGCTTCTATGAGCTCGAACCAGTCTTCGTCGACTGCTGGAACACCGAGTCTTCGCCCAAGTCATGGAATGTGGGACCACTCTGCCAGCTGAAACCTAAATCAGTACTCCAAGATGACCAGCCTGTCTGGATTGAATGGCTAGACAAGAAGAAGGTTGAAGGGAGCCGTGTTTTGTACGTGGCATTTGGAACTCAAGCGGTGATCTCATCGGAGCAGCTTCAAGAGATAGCAAACGCGTTGGAGAAGTCGGACGTCAACTTTCTGTGGGTGATAAGGAAGAAAGAGAGCTATACTTGGTGGGACTCGGAGTTCGAGGAGAGGGTGAGAGGGAGAGGGATGGTGGTCAGCGAGTGGGTGGACCAGACGGAGATACTCAACCACGAGAGCGTGGAGGGTTTTTTAAGTCATTGCGGGTGGAACTCGGCGATGGAGGCCATTTGCGCCGGAGTGCCGATTCTGGCGTGGCCGATGATGGCGGAGCAGCCACTGAATGGGAGGATGGTGGTGGAGGAGATAAAGGTTGGTTTGAGATTGGAGACGTGCGACGGGTCGGTTAGGGGGTTTGTGAAGGCGGAGAGGCTTGAGAAGATGGTGAAGAAGTTGATGGAGGGGGAGGAGGGGGAGGTGGTGAGGAAGAAGGTGAAGGAGGTTGGTGAAGTGGCGAGGAAGGCGGTGGAGGAGGGCGGGTCCTCGTGGCGGACGTTGGGGTTGCTCATTGATGAGGTATGCAGTAAAGAAAACTAG
Functional Annotation

Protein Analysis

454

Amino Acids

50.85

Weight (kDa)

5.27

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 19 - 234 2.6e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 263 - 376 1.5e-17 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 740
AatII GACGTC 1 cut(s) 873
AccB7I CCANNNNNTGG 2 cut(s) 681, 1109
AccI GTMKAC 3 cut(s) 216, 291, 648
AccII CGCG 3 cut(s) 129, 317, 854
AcoI YGGCCR 2 cut(s) 159, 1082
AcuI CTGAAG 1 cut(s) 573
AcvI CACGTG 1 cut(s) 374
AcyI GRCGYC 1 cut(s) 870
AfaI GTAC 2 cut(s) 723, 794
AfiI CCNNNNNNNGG 4 cut(s) 405, 681, 1109, 1314
AflIII ACRYGT 2 cut(s) 373, 852
AgsI TTSAA 4 cut(s) 466, 752, 776, 839
AjiI CACGTC 1 cut(s) 1158
AjuI GAANNNNNNNTTGG 4 cut(s) 155, 187, 422, 454
AloI GAACNNNNNNTCC 2 cut(s) 911, 943
Alw21I GWGCWC 2 cut(s) 272, 633
Alw26I GTCTC 2 cut(s) 394, 1148
AlwNI CAGNNNCTG 1 cut(s) 1105
Ama87I CYCGRG 2 cut(s) 442, 524
AoxI GGCC 7 cut(s) 82, 130, 159, 508, 520, 1050, 1082
ApeKI GCWGC 2 cut(s) 832, 1099
ArsI GACNNNNNNTTYG 2 cut(s) 911, 943
AspLEI GCGC 2 cut(s) 319, 1061
AspS9I GGNCC 4 cut(s) 521, 692, 976, 1305
AsuC2I CCSGG 1 cut(s) 158
AsuHPI GGTGA 8 cut(s) 142, 829, 898, 952, 1222, 1258, 1270, 1283
AvaI CYCGRG 2 cut(s) 442, 524
AvaII GGWCC 3 cut(s) 692, 976, 1305
BanII GRGCYC 1 cut(s) 633
BauI CACGAG 2 cut(s) 998, 1309
BbrPI CACGTG 1 cut(s) 374
BbsI GAAGAC 3 cut(s) 139, 634, 660
Bbv12I GWGCWC 2 cut(s) 272, 633
BbvI GCAGC 2 cut(s) 844, 1111
BccI CCATC 8 cut(s) 37, 98, 949, 1039, 1084, 1111, 1201, 1216
BceAI ACGGC 8 cut(s) 122, 208, 245, 475, 535, 572, 590, 768
BcnI CCSGG 1 cut(s) 158
BcoDI GTCTC 2 cut(s) 394, 1148
BfaI CTAG 4 cut(s) 359, 416, 758, 1360
BisI GCNGC 6 cut(s) 49, 130, 204, 258, 833, 1100
BlsI GCNGC 6 cut(s) 50, 131, 205, 259, 834, 1101
BmcAI AGTACT 1 cut(s) 723
Bme1390I CCNGG 1 cut(s) 158
Bme18I GGWCC 3 cut(s) 692, 976, 1305
BmeT110I CYCGRG 2 cut(s) 442, 524
BmgBI CACGTC 1 cut(s) 1158
BmgT120I GGNCC 4 cut(s) 521, 692, 976, 1305
BmiI GGNNCC 6 cut(s) 481, 523, 586, 693, 782, 1306
BmrFI CCNGG 1 cut(s) 158
BpiI GAAGAC 3 cut(s) 139, 634, 660
BpuEI CTTGAG 2 cut(s) 795, 1220
BpuMI CCSGG 1 cut(s) 158
BsaAI YACGTR 2 cut(s) 374, 796
BsaHI GRCGYC 1 cut(s) 870
BsaI GGTCTC 1 cut(s) 394
BsaJI CCNNGG 4 cut(s) 127, 156, 443, 517
BsaXI ACNNNNNCTCC 8 cut(s) 266, 296, 464, 494, 576, 606, 1289, 1319
Bsc4I CCNNNNNNNGG 4 cut(s) 405, 681, 1109, 1314
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 1 cut(s) 638
Bse3DI GCAATG 1 cut(s) 1024
BseDI CCNNGG 4 cut(s) 127, 156, 443, 517
BseGI GGATG 5 cut(s) 90, 219, 237, 960, 1122
BseLI CCNNNNNNNGG 4 cut(s) 405, 681, 1109, 1314
BseMI GCAATG 1 cut(s) 1024
BseNI ACTGG 1 cut(s) 638
BseRI GAGGAG 9 cut(s) 89, 107, 110, 274, 503, 947, 1142, 1247, 1310
BseXI GCAGC 2 cut(s) 844, 1111
Bsh1236I CGCG 3 cut(s) 129, 317, 854
Bsh1285I CGRYCG 1 cut(s) 201
BshFI GGCC 7 cut(s) 84, 132, 161, 510, 522, 1052, 1084
BsiEI CGRYCG 1 cut(s) 201
BsiHKAI GWGCWC 2 cut(s) 272, 633
BsiHKCI CYCGRG 2 cut(s) 442, 524
BsiSI CCGG 3 cut(s) 158, 477, 1062
BslFI GGGAC 2 cut(s) 705, 932
BslI CCNNNNNNNGG 4 cut(s) 405, 681, 1109, 1314
BsmAI GTCTC 2 cut(s) 394, 1148
BsmBI CGTCTC 1 cut(s) 1148
BsmFI GGGAC 2 cut(s) 705, 932
BsnI GGCC 7 cut(s) 84, 132, 161, 510, 522, 1052, 1084
Bso31I GGTCTC 1 cut(s) 394
BsoBI CYCGRG 2 cut(s) 442, 524
Bsp1286I GDGCHC 2 cut(s) 272, 633
Bsp143I GATC 1 cut(s) 819
BspANI GGCC 7 cut(s) 84, 132, 161, 510, 522, 1052, 1084
BspFNI CGCG 3 cut(s) 129, 317, 854
BspHI TCATGA 1 cut(s) 570
BspLI GGNNCC 6 cut(s) 481, 523, 586, 693, 782, 1306
BspTNI GGTCTC 1 cut(s) 394
BsrDI GCAATG 1 cut(s) 1024
BsrFI RCCGGY 1 cut(s) 476
BsrI ACTGG 1 cut(s) 638
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 4 cut(s) 127, 156, 443, 517
BssMI GATC 1 cut(s) 819
BssNI GRCGYC 1 cut(s) 870
BssSI CACGAG 2 cut(s) 998, 1309
Bst2BI CACGAG 2 cut(s) 998, 1309
Bst4CI ACNGT 1 cut(s) 145
Bst6I CTCTTC 2 cut(s) 308, 372
BstACI GRCGYC 1 cut(s) 870
BstBAI YACGTR 2 cut(s) 374, 796
BstC8I GCNNGC 5 cut(s) 321, 339, 450, 478, 704
BstDSI CCRYGG 2 cut(s) 127, 517
BstF5I GGATG 5 cut(s) 90, 219, 237, 960, 1122
BstFNI CGCG 3 cut(s) 129, 317, 854
BstHHI GCGC 2 cut(s) 319, 1061
BstKTI GATC 1 cut(s) 822
BstMAI GTCTC 2 cut(s) 394, 1148
BstMBI GATC 1 cut(s) 819
BstMCI CGRYCG 1 cut(s) 201
BstMWI GCNNNNNNNGC 3 cut(s) 1049, 1058, 1286
BstNSI RCATGY 1 cut(s) 337
BstSCI CCNGG 1 cut(s) 156
BstUI CGCG 3 cut(s) 129, 317, 854
BstV1I GCAGC 2 cut(s) 844, 1111
BstV2I GAAGAC 3 cut(s) 139, 634, 660
BsuRI GGCC 7 cut(s) 84, 132, 161, 510, 522, 1052, 1084
BtgI CCRYGG 2 cut(s) 127, 517
BtgZI GCGATG 1 cut(s) 1058
BtrI CACGTC 1 cut(s) 1158
BtsCI GGATG 5 cut(s) 90, 219, 237, 960, 1122
BtsIMutI CAGTG 1 cut(s) 1103
Cac8I GCNNGC 5 cut(s) 321, 339, 450, 478, 704
CaiI CAGNNNCTG 1 cut(s) 1105
CciI TCATGA 1 cut(s) 570
CfoI GCGC 2 cut(s) 319, 1061
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 4 cut(s) 521, 692, 976, 1305
Cfr42I CCGCGG 1 cut(s) 130
CseI GACGC 1 cut(s) 421
Csp6I GTAC 2 cut(s) 722, 793
CviAII CATG 6 cut(s) 53, 73, 334, 385, 571, 681
CviQI GTAC 2 cut(s) 722, 793
DpnI GATC 1 cut(s) 821
DpnII GATC 1 cut(s) 819
DrdI GACNNNNNNGTC 1 cut(s) 740
DseDI GACNNNNNNGTC 1 cut(s) 740
EaeI YGGCCR 2 cut(s) 159, 1082
Eam1104I CTCTTC 2 cut(s) 308, 372
EarI CTCTTC 2 cut(s) 308, 372
EciI GGCGGA 3 cut(s) 1109, 1205, 1330
Ecl136II GAGCTC 1 cut(s) 631
Eco24I GRGCYC 1 cut(s) 633
Eco31I GGTCTC 1 cut(s) 394
Eco47I GGWCC 3 cut(s) 692, 976, 1305
Eco53kI GAGCTC 1 cut(s) 631
Eco57I CTGAAG 1 cut(s) 573
Eco72I CACGTG 1 cut(s) 374
Eco88I CYCGRG 2 cut(s) 442, 524
EcoICRI GAGCTC 1 cut(s) 631
EcoO109I RGGNCCY 1 cut(s) 1305
EcoT38I GRGCYC 1 cut(s) 633
Esp3I CGTCTC 1 cut(s) 1148
FaeI CATG 6 cut(s) 56, 76, 337, 388, 574, 684
FalI AAGNNNNNCTT 2 cut(s) 422, 454
FaqI GGGAC 2 cut(s) 705, 932
FatI CATG 6 cut(s) 52, 72, 333, 384, 570, 680
FauI CCCGC 5 cut(s) 119, 134, 262, 1022, 1295
FblI GTMKAC 3 cut(s) 216, 291, 648
Fnu4HI GCNGC 6 cut(s) 49, 130, 204, 258, 833, 1100
FokI GGATG 5 cut(s) 77, 206, 224, 967, 1129
FriOI GRGCYC 1 cut(s) 633
Fsp4HI GCNGC 6 cut(s) 49, 130, 204, 258, 833, 1100
FspBI CTAG 4 cut(s) 359, 416, 758, 1360
GlaI GCGC 2 cut(s) 318, 1060
GluI GCNGC 6 cut(s) 49, 130, 204, 258, 833, 1100
HaeIII GGCC 7 cut(s) 84, 132, 161, 510, 522, 1052, 1084
HapII CCGG 3 cut(s) 158, 477, 1062
HgaI GACGC 1 cut(s) 421
HhaI GCGC 2 cut(s) 319, 1061
Hin1I GRCGYC 1 cut(s) 870
Hin1II CATG 6 cut(s) 56, 76, 337, 388, 574, 684
Hin6I GCGC 2 cut(s) 317, 1059
HinP1I GCGC 2 cut(s) 317, 1059
HincII GTYRAC 4 cut(s) 292, 595, 649, 874
HindII GTYRAC 4 cut(s) 292, 595, 649, 874
HinfI GANTC 7 cut(s) 395, 419, 492, 527, 665, 920, 1072
HpaI GTTAAC 1 cut(s) 595
HpaII CCGG 3 cut(s) 158, 477, 1062
HphI GGTGA 8 cut(s) 142, 829, 898, 952, 1222, 1258, 1270, 1283
Hpy166II GTNNAC 7 cut(s) 217, 292, 411, 595, 649, 874, 976
Hpy188I TCNGA 7 cut(s) 34, 394, 532, 562, 829, 868, 925
Hpy188III TCNNGA 7 cut(s) 265, 349, 442, 551, 571, 745, 839
Hpy8I GTNNAC 7 cut(s) 217, 292, 411, 595, 649, 874, 976
Hpy99I CGWCG 9 cut(s) 215, 266, 293, 296, 500, 581, 593, 650, 1166
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4IV ACGT 6 cut(s) 373, 576, 795, 870, 1157, 1319
HpyCH4V TGCA 2 cut(s) 337, 1347
HpyF10VI GCNNNNNNNGC 3 cut(s) 1049, 1058, 1286
HpySE526I ACGT 6 cut(s) 373, 576, 795, 870, 1157, 1319
Hsp92I GRCGYC 1 cut(s) 870
Hsp92II CATG 6 cut(s) 56, 76, 337, 388, 574, 684
HspAI GCGC 2 cut(s) 317, 1059
KroI GCCGGC 1 cut(s) 476
KroNI GCCGGC 1 cut(s) 478
KspAI GTTAAC 1 cut(s) 595
KspI CCGCGG 1 cut(s) 130
Kzo9I GATC 1 cut(s) 819
LmnI GCTCC 5 cut(s) 485, 584, 780, 829, 1096
Lsp1109I GCAGC 2 cut(s) 844, 1111
MaeI CTAG 4 cut(s) 359, 416, 758, 1360
MaeII ACGT 6 cut(s) 373, 576, 795, 870, 1157, 1319
MaeIII GTNAC 3 cut(s) 139, 484, 610
MalI GATC 1 cut(s) 821
MboI GATC 1 cut(s) 819
MhlI GDGCHC 2 cut(s) 272, 633
MluCI AATT 1 cut(s) 182
MluI ACGCGT 1 cut(s) 852
MlyI GAGTC 5 cut(s) 389, 413, 536, 674, 914
MmeI TCCRAC 3 cut(s) 417, 837, 846
MroNI GCCGGC 1 cut(s) 476
MseI TTAA 2 cut(s) 594, 1019
MspA1I CMGCKG 2 cut(s) 129, 706
MspI CCGG 3 cut(s) 158, 477, 1062
MspR9I CCNGG 1 cut(s) 158
MvnI CGCG 3 cut(s) 129, 317, 854
MwoI GCNNNNNNNGC 3 cut(s) 1049, 1058, 1286
NaeI GCCGGC 1 cut(s) 478
NciI CCSGG 1 cut(s) 158
NdeII GATC 1 cut(s) 819
NgoMIV GCCGGC 1 cut(s) 476
NlaIII CATG 6 cut(s) 56, 76, 337, 388, 574, 684
NlaIV GGNNCC 6 cut(s) 481, 523, 586, 693, 782, 1306
NmeAIII GCCGAG 1 cut(s) 1019
NmuCI GTSAC 2 cut(s) 484, 610
NspI RCATGY 1 cut(s) 337
PagI TCATGA 1 cut(s) 570
PcsI WCGNNNNNNNCGW 4 cut(s) 141, 480, 585, 1316
PdiI GCCGGC 1 cut(s) 478
PfeI GAWTC 2 cut(s) 492, 1072
PflMI CCANNNNNTGG 2 cut(s) 681, 1109
PkrI GCNGC 6 cut(s) 50, 131, 205, 259, 834, 1101
PleI GAGTC 5 cut(s) 389, 413, 535, 673, 914
PmaCI CACGTG 1 cut(s) 374
PmlI CACGTG 1 cut(s) 374
PpsI GAGTC 5 cut(s) 389, 413, 535, 673, 914
Ppu21I YACGTR 2 cut(s) 374, 796
PpuMI RGGWCCY 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 633
Psp5II RGGWCCY 1 cut(s) 1305
PspCI CACGTG 1 cut(s) 374
PspN4I GGNNCC 6 cut(s) 481, 523, 586, 693, 782, 1306
PspPI GGNCC 4 cut(s) 521, 692, 976, 1305
PspPPI RGGWCCY 1 cut(s) 1305
PstNI CAGNNNCTG 1 cut(s) 1105
PvuII CAGCTG 1 cut(s) 706
RsaI GTAC 2 cut(s) 723, 794
RsaNI GTAC 2 cut(s) 722, 793
SacI GAGCTC 1 cut(s) 633
SacII CCGCGG 1 cut(s) 130
SalI GTCGAC 2 cut(s) 290, 647
SaqAI TTAA 2 cut(s) 594, 1019
SatI GCNGC 6 cut(s) 49, 130, 204, 258, 833, 1100
Sau3AI GATC 1 cut(s) 819
Sau96I GGNCC 4 cut(s) 521, 692, 976, 1305
ScaI AGTACT 1 cut(s) 723
SchI GAGTC 5 cut(s) 389, 413, 536, 674, 914
ScrFI CCNGG 1 cut(s) 158
SduI GDGCHC 2 cut(s) 272, 633
Sfr303I CCGCGG 1 cut(s) 130
SgrBI CCGCGG 1 cut(s) 130
SgrDI CGTCGACG 1 cut(s) 290
SinI GGWCC 3 cut(s) 692, 976, 1305
SmlI CTYRAG 2 cut(s) 810, 1199
SmoI CTYRAG 2 cut(s) 810, 1199
Sse9I AATT 1 cut(s) 182
SspI AATATT 1 cut(s) 25
SspMI CTAG 4 cut(s) 359, 416, 758, 1360
SstI GAGCTC 1 cut(s) 633
StyD4I CCNGG 1 cut(s) 156
TaaI ACNGT 1 cut(s) 145
TaiI ACGT 6 cut(s) 376, 579, 798, 873, 1160, 1322
TaqI TCGA 7 cut(s) 177, 264, 291, 348, 633, 648, 930
TasI AATT 1 cut(s) 182
TatI WGTACW 1 cut(s) 721
TauI GCSGC 4 cut(s) 51, 132, 206, 260
TfiI GAWTC 2 cut(s) 492, 1072
Tru1I TTAA 2 cut(s) 594, 1019
Tru9I TTAA 2 cut(s) 594, 1019
TscAI CASTG 1 cut(s) 1110
TseFI GTSAC 2 cut(s) 484, 610
TseI GCWGC 2 cut(s) 832, 1099
Tsp45I GTSAC 2 cut(s) 484, 610
TspDTI ATGAA 4 cut(s) 61, 163, 373, 587
TspGWI ACGGA 4 cut(s) 199, 277, 472, 998
TspRI CASTG 1 cut(s) 1110
Van91I CCANNNNNTGG 2 cut(s) 681, 1109
VpaK11BI GGWCC 3 cut(s) 692, 976, 1305
XceI RCATGY 1 cut(s) 337
XmiI GTMKAC 3 cut(s) 216, 291, 648
XspI CTAG 4 cut(s) 359, 416, 758, 1360
ZraI GACGTC 1 cut(s) 871
ZrmI AGTACT 1 cut(s) 723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.