AT5G14860

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
4805846 .. 4807837
1992 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14860.1

Sequence Viewer

Length: 1479 bp
ATGGCCGTTTCATCGTCGCATCATGCGGTTCTCTTCCCTTACATGTCAAAAGGCCACACGATTCCTCTCCTCCAATTCGCCCGTCTCCTCCTCCGTCACCGCCGTATCGTCTCCGTAGACGACGAAGAACCAACCATTTCCGTCACCGTCTTCACCACCCCAAAAAACCAACCATTCGTCTCAAACTTCCTCTCTGACGTCGCATCATCTATCAAAGTAATCTCCCTCCCTTTCCCTGAAAACATCGCCGGAATCCCTCCCGGCGTCGAGAGCACCGACATGCTCCCTTCCATATCACTTTACGTGCCCTTCACGCGCGCAACCAAATCTCTCCAGCCTTTCTTCGAAGCAGAACTCAAGAATCTTGAGAAAGTTTCTTTCATGGTCTCCGATGGATTCTTATGGTGGACATCGGAATCCGCCGCTAAATTTGAGATCCCGAGACTTGCCTTCTACGGCATGAACTCCTACGCATCGGCTATGTGCTCCGCCATTTCGGTACACGAGCTCTTTACCAAACCGGAAAGTGTTAAATCTGATACTGAACCGGTTACTGTACCGGATTTTCCATGGATATGTGTTAAGAAGTGTGAGTTCGATCCGGTTTTGACCGAACCGGATCAATCGGATCCAGCGTTCGAGCTACTCATTGACCATCTTATGTCCACCAAGAAAAGCCGTGGAGTTATAGTGAACAGCTTTTACGAGCTCGAGTCAACGTTCGTTGACTACCGGCTCCGTGATAACGATGAACCAAAACCGTGGTGTGTTGGGCCTTTGTGTTTGGTAAATCCTCCAAAACCGGAGAGTGATAAACCGGATTGGATTCATTGGTTGGACCGGAAACTAGAGGAAAGATGTCCGGTTATGTATGTGGCGTTTGGAACGCAGGCTGAGATATCGAACGAGCAGCTCAAGGAAATAGCATTAGGGTTGGAAGATTCCAAGGTCAATTTCTTGTGGGTCACGAGAAAGGACTTGGAAGAAGTAACTGGAGGATTAGGGTTCGAAAAGAGAGTGAAAGAGCATGGGATGATTGTGAGAGATTGGGTAGACCAATGGGAGATATTGTCACATAAAAGTGTCAAAGGGTTTTTGAGTCATTGTGGATGGAACTCGGCGCAAGAGAGTATTTGCGCTGGGGTTCCACTACTCGCTTGGCCAATGATGGCAGAGCAGCCACTCAATGCGAAGTTGGTAGTGGAGGAGCTAAAGATCGGAGTAAGAATCGAAACAGAAGATGTAAGTGTGAAAGGATTCGTGACAAGAGAAGAACTTAGTCGAAAGGTTAAACAATTGATGGAGGGAGAGATGGGGAAGACAACGATGAAGAATGTAAAAGAGTATGCGAAAATGGCGAAAAAAGCTATGGCTCAAGGGACTGGTTCGTCTTGGAAGAGTTTGGATTCGCTTCTGGAAGAGCTTTGTAAGAGTAGAGAGCCAGACGGTGTTAATAAGTTGTCAAGTTCTGATGCTTAG
Functional Annotation

Protein Analysis

492

Amino Acids

55.42

Weight (kDa)

5.43

Isoelectric Point (pI)

43.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 289 - 438 6.7e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1387
AatII GACGTC 1 cut(s) 201
AccI GTMKAC 2 cut(s) 117, 1053
AccII CGCG 2 cut(s) 316, 318
AciI CCGC 5 cut(s) 26, 100, 420, 423, 489
AclI AACGTT 1 cut(s) 719
AclWI GGATC 5 cut(s) 430, 593, 623, 627, 636
AcoI YGGCCR 2 cut(s) 3, 1160
AcsI RAATTY 1 cut(s) 428
AcyI GRCGYC 2 cut(s) 198, 264
AfaI GTAC 2 cut(s) 501, 558
AflIII ACRYGT 1 cut(s) 42
AgeI ACCGGT 1 cut(s) 547
AjuI GAANNNNNNNTTGG 2 cut(s) 938, 970
AloI GAACNNNNNNTCC 2 cut(s) 620, 652
AluBI AGCT 8 cut(s) 508, 643, 699, 709, 913, 1210, 1367, 1423
AluI AGCT 8 cut(s) 508, 643, 699, 709, 913, 1210, 1367, 1423
Alw21I GWGCWC 4 cut(s) 275, 488, 510, 711
Alw26I GTCTC 5 cut(s) 89, 115, 184, 391, 436
AlwI GGATC 5 cut(s) 430, 593, 623, 627, 636
Ama87I CYCGRG 2 cut(s) 439, 710
AoxI GGCC 4 cut(s) 3, 52, 773, 1160
ApeKI GCWGC 2 cut(s) 910, 1177
ApoI RAATTY 1 cut(s) 428
AsiGI ACCGGT 1 cut(s) 547
Asp700I GAANNNNTTC 1 cut(s) 1256
AspLEI GCGC 4 cut(s) 318, 320, 1123, 1139
AspS9I GGNCC 2 cut(s) 773, 838
AsuC2I CCSGG 1 cut(s) 261
AsuHPI GGTGA 3 cut(s) 89, 136, 145
AsuII TTCGAA 2 cut(s) 345, 1008
AvaI CYCGRG 2 cut(s) 439, 710
AvaII GGWCC 1 cut(s) 838
BaeGI GKGCMC 1 cut(s) 309
BaeI ACNNNNGTAYC 2 cut(s) 88, 121
BalI TGGCCA 1 cut(s) 1162
BamHI GGATCC 1 cut(s) 628
BanII GRGCYC 2 cut(s) 510, 711
BauI CACGAG 2 cut(s) 503, 967
BbsI GAAGAC 2 cut(s) 142, 1325
Bbv12I GWGCWC 4 cut(s) 275, 488, 510, 711
BbvI GCAGC 2 cut(s) 922, 1189
BccI CCATC 6 cut(s) 386, 663, 1104, 1162, 1294, 1306
BceAI ACGGC 3 cut(s) 87, 472, 663
BcnI CCSGG 1 cut(s) 261
BcoDI GTCTC 5 cut(s) 89, 115, 184, 391, 436
BfaI CTAG 1 cut(s) 848
BisI GCNGC 3 cut(s) 423, 911, 1178
BlsI GCNGC 3 cut(s) 424, 912, 1179
Bme1390I CCNGG 1 cut(s) 261
Bme18I GGWCC 1 cut(s) 838
BmeT110I CYCGRG 2 cut(s) 439, 710
BmgT120I GGNCC 2 cut(s) 773, 838
BmiI GGNNCC 3 cut(s) 630, 737, 1146
BmrFI CCNGG 1 cut(s) 261
BmsI GCATC 4 cut(s) 28, 212, 482, 1462
BpiI GAAGAC 2 cut(s) 142, 1325
BpmI CTGGAG 2 cut(s) 317, 1014
Bpu14I TTCGAA 2 cut(s) 345, 1008
BpuEI CTTGAG 4 cut(s) 341, 386, 899, 1359
BpuMI CCSGG 1 cut(s) 261
BsaAI YACGTR 1 cut(s) 304
BsaHI GRCGYC 2 cut(s) 198, 264
BsaI GGTCTC 1 cut(s) 391
BsaJI CCNNGG 4 cut(s) 569, 679, 761, 945
BsaWI WCCGGW 9 cut(s) 520, 547, 559, 601, 616, 802, 817, 840, 862
BsaXI ACNNNNNCTCC 4 cut(s) 675, 705, 1055, 1085
Bse118I RCCGGY 2 cut(s) 547, 732
Bse1I ACTGG 2 cut(s) 997, 1387
BseDI CCNNGG 4 cut(s) 569, 679, 761, 945
BseGI GGATG 2 cut(s) 1038, 1115
BseMII CTCAG 1 cut(s) 885
BseNI ACTGG 2 cut(s) 997, 1387
BsePI GCGCGC 1 cut(s) 316
BseRI GAGGAG 4 cut(s) 59, 77, 80, 1220
BseSI GKGCMC 1 cut(s) 309
BseXI GCAGC 2 cut(s) 922, 1189
BseYI CCCAGC 1 cut(s) 1139
Bsh1236I CGCG 2 cut(s) 316, 318
BshFI GGCC 4 cut(s) 5, 54, 775, 1162
BshTI ACCGGT 1 cut(s) 547
BsiHKAI GWGCWC 4 cut(s) 275, 488, 510, 711
BsiHKCI CYCGRG 2 cut(s) 439, 710
BslFI GGGAC 1 cut(s) 1393
BsmAI GTCTC 5 cut(s) 89, 115, 184, 391, 436
BsmBI CGTCTC 3 cut(s) 89, 115, 184
BsmFI GGGAC 1 cut(s) 1393
BsnI GGCC 4 cut(s) 5, 54, 775, 1162
Bso31I GGTCTC 1 cut(s) 391
BsoBI CYCGRG 2 cut(s) 439, 710
Bsp119I TTCGAA 2 cut(s) 345, 1008
Bsp1286I GDGCHC 5 cut(s) 275, 309, 488, 510, 711
Bsp143I GATC 5 cut(s) 435, 598, 619, 628, 1215
Bsp19I CCATGG 1 cut(s) 569
BspACI CCGC 5 cut(s) 26, 100, 420, 423, 489
BspANI GGCC 4 cut(s) 5, 54, 775, 1162
BspCNI CTCAG 1 cut(s) 886
BspFNI CGCG 2 cut(s) 316, 318
BspLI GGNNCC 3 cut(s) 630, 737, 1146
BspPI GGATC 5 cut(s) 430, 593, 623, 627, 636
BspQI GCTCTTC 1 cut(s) 1413
BspT104I TTCGAA 2 cut(s) 345, 1008
BspTNI GGTCTC 1 cut(s) 391
BsrFI RCCGGY 2 cut(s) 547, 732
BsrI ACTGG 2 cut(s) 997, 1387
BssAI RCCGGY 2 cut(s) 547, 732
BssECI CCNNGG 4 cut(s) 569, 679, 761, 945
BssHII GCGCGC 1 cut(s) 316
BssMI GATC 5 cut(s) 435, 598, 619, 628, 1215
BssNI GRCGYC 2 cut(s) 198, 264
BssSI CACGAG 2 cut(s) 503, 967
BssT1I CCWWGG 2 cut(s) 569, 945
Bst2BI CACGAG 2 cut(s) 503, 967
Bst4CI ACNGT 4 cut(s) 148, 556, 762, 1448
Bst6I CTCTTC 3 cut(s) 38, 1391, 1413
BstACI GRCGYC 2 cut(s) 198, 264
BstBAI YACGTR 1 cut(s) 304
BstBI TTCGAA 2 cut(s) 345, 1008
BstC8I GCNNGC 2 cut(s) 318, 891
BstDEI CTNAG 3 cut(s) 894, 1277, 1476
BstDSI CCRYGG 3 cut(s) 569, 679, 761
BstF5I GGATG 2 cut(s) 1038, 1115
BstFNI CGCG 2 cut(s) 316, 318
BstHHI GCGC 4 cut(s) 318, 320, 1123, 1139
BstKTI GATC 5 cut(s) 438, 601, 622, 631, 1218
BstMAI GTCTC 5 cut(s) 89, 115, 184, 391, 436
BstMBI GATC 5 cut(s) 435, 598, 619, 628, 1215
BstMWI GCNNNNNNNGC 4 cut(s) 270, 313, 1355, 1364
BstNSI RCATGY 2 cut(s) 46, 283
BstSCI CCNGG 1 cut(s) 259
BstSLI GKGCMC 1 cut(s) 309
BstUI CGCG 2 cut(s) 316, 318
BstV1I GCAGC 2 cut(s) 922, 1189
BstV2I GAAGAC 2 cut(s) 142, 1325
BstX2I RGATCY 2 cut(s) 435, 628
BstXI CCANNNNNNTGG 1 cut(s) 762
BstYI RGATCY 2 cut(s) 435, 628
BsuRI GGCC 4 cut(s) 5, 54, 775, 1162
BtgI CCRYGG 3 cut(s) 569, 679, 761
BtgZI GCGATG 1 cut(s) 229
BtsCI GGATG 2 cut(s) 1038, 1115
Cac8I GCNNGC 2 cut(s) 318, 891
CfoI GCGC 4 cut(s) 318, 320, 1123, 1139
Cfr10I RCCGGY 2 cut(s) 547, 732
Cfr13I GGNCC 2 cut(s) 773, 838
CseI GACGC 1 cut(s) 253
Csp6I GTAC 2 cut(s) 500, 557
CspAI ACCGGT 1 cut(s) 547
CviAII CATG 7 cut(s) 23, 43, 280, 382, 460, 570, 1028
CviQI GTAC 2 cut(s) 500, 557
DdeI CTNAG 3 cut(s) 894, 1277, 1476
DpnI GATC 5 cut(s) 437, 600, 621, 630, 1217
DpnII GATC 5 cut(s) 435, 598, 619, 628, 1215
DrdI GACNNNNNNGTC 1 cut(s) 1387
DseDI GACNNNNNNGTC 1 cut(s) 1387
EaeI YGGCCR 2 cut(s) 3, 1160
Eam1104I CTCTTC 3 cut(s) 38, 1391, 1413
EarI CTCTTC 3 cut(s) 38, 1391, 1413
EciI GGCGGA 2 cut(s) 409, 478
Ecl136II GAGCTC 2 cut(s) 508, 709
Eco130I CCWWGG 2 cut(s) 569, 945
Eco24I GRGCYC 2 cut(s) 510, 711
Eco31I GGTCTC 1 cut(s) 391
Eco32I GATATC 1 cut(s) 900
Eco47I GGWCC 1 cut(s) 838
Eco53kI GAGCTC 2 cut(s) 508, 709
Eco88I CYCGRG 2 cut(s) 439, 710
EcoICRI GAGCTC 2 cut(s) 508, 709
EcoRV GATATC 1 cut(s) 900
EcoT14I CCWWGG 2 cut(s) 569, 945
EcoT38I GRGCYC 2 cut(s) 510, 711
ErhI CCWWGG 2 cut(s) 569, 945
Esp3I CGTCTC 3 cut(s) 89, 115, 184
FaeI CATG 7 cut(s) 26, 46, 283, 385, 463, 573, 1031
FaqI GGGAC 1 cut(s) 1393
FatI CATG 7 cut(s) 22, 42, 279, 381, 459, 569, 1027
FblI GTMKAC 2 cut(s) 117, 1053
Fnu4HI GCNGC 3 cut(s) 423, 911, 1178
FokI GGATG 2 cut(s) 1045, 1122
FriOI GRGCYC 2 cut(s) 510, 711
Fsp4HI GCNGC 3 cut(s) 423, 911, 1178
FspBI CTAG 1 cut(s) 848
GlaI GCGC 4 cut(s) 317, 319, 1122, 1138
GluI GCNGC 3 cut(s) 423, 911, 1178
GsaI CCCAGC 1 cut(s) 1143
GsuI CTGGAG 2 cut(s) 317, 1014
HaeIII GGCC 4 cut(s) 5, 54, 775, 1162
HgaI GACGC 1 cut(s) 253
HhaI GCGC 4 cut(s) 318, 320, 1123, 1139
Hin1I GRCGYC 2 cut(s) 198, 264
Hin1II CATG 7 cut(s) 26, 46, 283, 385, 463, 573, 1031
Hin6I GCGC 4 cut(s) 316, 318, 1121, 1137
HinP1I GCGC 4 cut(s) 316, 318, 1121, 1137
HincII GTYRAC 2 cut(s) 717, 727
HindII GTYRAC 2 cut(s) 717, 727
HphI GGTGA 3 cut(s) 89, 136, 145
Hpy166II GTNNAC 8 cut(s) 118, 408, 502, 666, 694, 717, 727, 1054
Hpy188I TCNGA 7 cut(s) 196, 391, 415, 538, 628, 1220, 1471
Hpy188III TCNNGA 7 cut(s) 268, 358, 365, 439, 967, 1261, 1415
Hpy8I GTNNAC 8 cut(s) 118, 408, 502, 666, 694, 717, 727, 1054
Hpy99I CGWCG 4 cut(s) 19, 125, 203, 269
HpyAV CCTTC 3 cut(s) 297, 319, 460
HpyCH4III ACNGT 4 cut(s) 148, 556, 762, 1448
HpyCH4IV ACGT 3 cut(s) 198, 303, 719
HpyF10VI GCNNNNNNNGC 4 cut(s) 270, 313, 1355, 1364
HpyF3I CTNAG 3 cut(s) 894, 1277, 1476
HpySE526I ACGT 3 cut(s) 198, 303, 719
Hsp92I GRCGYC 2 cut(s) 198, 264
Hsp92II CATG 7 cut(s) 26, 46, 283, 385, 463, 573, 1031
HspAI GCGC 4 cut(s) 316, 318, 1121, 1137
Kzo9I GATC 5 cut(s) 435, 598, 619, 628, 1215
LguI GCTCTTC 1 cut(s) 1413
LmnI GCTCC 4 cut(s) 288, 491, 741, 1207
Lsp1109I GCAGC 2 cut(s) 922, 1189
LweI GCATC 4 cut(s) 28, 212, 482, 1462
MaeI CTAG 1 cut(s) 848
MaeII ACGT 3 cut(s) 198, 303, 719
MaeIII GTNAC 7 cut(s) 95, 142, 550, 964, 988, 1071, 1261
MalI GATC 5 cut(s) 437, 600, 621, 630, 1217
MboI GATC 5 cut(s) 435, 598, 619, 628, 1215
MfeI CAATTG 1 cut(s) 1295
MflI RGATCY 2 cut(s) 435, 628
MhlI GDGCHC 5 cut(s) 275, 309, 488, 510, 711
MlsI TGGCCA 1 cut(s) 1162
MluCI AATT 4 cut(s) 74, 428, 952, 1295
MluNI TGGCCA 1 cut(s) 1162
MlyI GAGTC 2 cut(s) 722, 1108
MmeI TCCRAC 2 cut(s) 816, 915
Mox20I TGGCCA 1 cut(s) 1162
MroXI GAANNNNTTC 1 cut(s) 1256
MscI TGGCCA 1 cut(s) 1162
MseI TTAA 4 cut(s) 531, 582, 1290, 1452
MslI CAYNNNNRTG 3 cut(s) 278, 574, 1080
Msp20I TGGCCA 1 cut(s) 1162
MspR9I CCNGG 1 cut(s) 261
MunI CAATTG 1 cut(s) 1295
MvnI CGCG 2 cut(s) 316, 318
MwoI GCNNNNNNNGC 4 cut(s) 270, 313, 1355, 1364
NciI CCSGG 1 cut(s) 261
NcoI CCATGG 1 cut(s) 569
NdeII GATC 5 cut(s) 435, 598, 619, 628, 1215
NlaIII CATG 7 cut(s) 26, 46, 283, 385, 463, 573, 1031
NlaIV GGNNCC 3 cut(s) 630, 737, 1146
NmeAIII GCCGAG 1 cut(s) 1097
NmuCI GTSAC 5 cut(s) 95, 142, 964, 1071, 1261
NspI RCATGY 2 cut(s) 46, 283
NspV TTCGAA 2 cut(s) 345, 1008
PaeR7I CTCGAG 1 cut(s) 710
PauI GCGCGC 1 cut(s) 316
PciI ACATGT 1 cut(s) 42
PciSI GCTCTTC 1 cut(s) 1413
PcsI WCGNNNNNNNCGW 2 cut(s) 273, 632
PdmI GAANNNNTTC 1 cut(s) 1256
PinAI ACCGGT 1 cut(s) 547
PkrI GCNGC 3 cut(s) 424, 912, 1179
PleI GAGTC 2 cut(s) 721, 1107
PpsI GAGTC 2 cut(s) 721, 1107
Ppu21I YACGTR 1 cut(s) 304
PscI ACATGT 1 cut(s) 42
Psp124BI GAGCTC 2 cut(s) 510, 711
Psp1406I AACGTT 1 cut(s) 719
PspFI CCCAGC 1 cut(s) 1139
PspN4I GGNNCC 3 cut(s) 630, 737, 1146
PspPI GGNCC 2 cut(s) 773, 838
PspXI VCTCGAGB 1 cut(s) 710
PsrI GAACNNNNNNTAC 2 cut(s) 686, 718
PsuI RGATCY 2 cut(s) 435, 628
PteI GCGCGC 1 cut(s) 316
RsaI GTAC 2 cut(s) 501, 558
RsaNI GTAC 2 cut(s) 500, 557
RseI CAYNNNNRTG 3 cut(s) 278, 574, 1080
SacI GAGCTC 2 cut(s) 510, 711
SapI GCTCTTC 1 cut(s) 1413
SaqAI TTAA 4 cut(s) 531, 582, 1290, 1452
SatI GCNGC 3 cut(s) 423, 911, 1178
Sau3AI GATC 5 cut(s) 435, 598, 619, 628, 1215
Sau96I GGNCC 2 cut(s) 773, 838
SchI GAGTC 2 cut(s) 722, 1108
ScrFI CCNGG 1 cut(s) 261
SduI GDGCHC 5 cut(s) 275, 309, 488, 510, 711
SfaNI GCATC 4 cut(s) 28, 212, 482, 1462
Sfr274I CTCGAG 1 cut(s) 710
SfuI TTCGAA 2 cut(s) 345, 1008
SinI GGWCC 1 cut(s) 838
SlaI CTCGAG 1 cut(s) 710
SmiMI CAYNNNNRTG 3 cut(s) 278, 574, 1080
SmlI CTYRAG 5 cut(s) 356, 365, 710, 914, 1374
SmoI CTYRAG 5 cut(s) 356, 365, 710, 914, 1374
Sse9I AATT 4 cut(s) 74, 428, 952, 1295
SsiI CCGC 5 cut(s) 26, 100, 420, 423, 489
SspMI CTAG 1 cut(s) 848
SstI GAGCTC 2 cut(s) 510, 711
StyD4I CCNGG 1 cut(s) 259
StyI CCWWGG 2 cut(s) 569, 945
TaaI ACNGT 4 cut(s) 148, 556, 762, 1448
TaiI ACGT 3 cut(s) 201, 306, 722
TaqI TCGA 9 cut(s) 267, 345, 597, 639, 711, 902, 1008, 1230, 1282
TaqII GACCGA 1 cut(s) 626
TasI AATT 4 cut(s) 74, 428, 952, 1295
TauI GCSGC 1 cut(s) 425
Tru1I TTAA 4 cut(s) 531, 582, 1290, 1452
Tru9I TTAA 4 cut(s) 531, 582, 1290, 1452
TseFI GTSAC 5 cut(s) 95, 142, 964, 1071, 1261
TseI GCWGC 2 cut(s) 910, 1177
Tsp45I GTSAC 5 cut(s) 95, 142, 964, 1071, 1261
TspDTI ATGAA 5 cut(s) 370, 476, 765, 818, 1343
TspGWI ACGGA 4 cut(s) 83, 103, 130, 728
VpaK11BI GGWCC 1 cut(s) 838
XapI RAATTY 1 cut(s) 428
XceI RCATGY 2 cut(s) 46, 283
XcmI CCANNNNNNNNNTGG 1 cut(s) 1155
XhoI CTCGAG 1 cut(s) 710
XmiI GTMKAC 2 cut(s) 117, 1053
XmnI GAANNNNTTC 1 cut(s) 1256
XspI CTAG 1 cut(s) 848
ZraI GACGTC 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.