pycom17g03300

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
2172123 .. 2173604
1482 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g03300.1

Sequence Viewer

Length: 1482 bp
ATGGGTTCACAATCGCAGCATGAGCATGAGATAGAGAAGGGCCACGTAGTTTTGTTCCCCTTCATGGCGAAAGGCCACACCATCCCTCTCCTCAACCTGTCTCGCATCTTCCTCGCTCAGGGACTCGCCGTTACCGTCTTCACCACCCCCGCCAACCGCACCTTCATCCACCAATCCCTTCCCGCAGCCGCTAACGTGGTCCACATCTCTTTCCCTCAAAACATCGTCCCTGGAATCCCCGCAGGCGTCGAAAGCACCGACAAGCTCCCTTCAATGGACCTCTTCTTCTCCTTCGCCCTCTCAACCATCCACATGCAACCCGACTTCGAGCGAGCCCTCCAAACCCTTCCACGCGTTAGCTTCATGGTCTCCGACGCCTTCCTCTGGTGGACCGTCGACTCCGCTGCCAAGTTCGGTTTCCCCAGATTTGTTTTCTCTGGTTTCGGAAGCTACGCCTCATCCCTGTCTATAGTCGTTGTTGTGAGCCGGCTCCTAGACGGGGCCGACTCCGACACGGAGTTAGTCACCGTAACTCGGTTTCCGTGGATCAAAGTTACCAAAAAGGACTTTAACCAGTCCACTATTACTGATGGTGTCCAACATGCATCCTCTGAGTTCATGATGAAAACATCGGAGTCAACCGCTCGTAGCTACGGTATGATAGTCAACAGTTTCTACGAGCTCGAAGCTGTGTTCGTTGAGTGCTGGAACACTGAGTATTTGCCCAAGGCCTGTTGTGTGGGTCCCTTTTTTAAGCTGGCACAAGATGAACCACACGATTGTGATGAAAAGGCGATCTGGATTGAGTGGCTGGACAAAAAGCTGGAGGAGGGAGGTAGAGTTTTGTATGTTGCGTTTGGGTCGCAAGCTGAGCTATCAGCTGAGCAGCTCCAAGAGATAGCTTTAGGGTTGGAAAACTCTATGGTCCACTTTATGTGGGTCATAAGAAGCAAATCCTACGCACCAGAGACCGCCGCGTGGGATATCAAAGGGTTTGAAGAGAGAGTGAAGGGGAGGGGAATGGTGGTTAATGAGTGGGTTGACCAGAGGAGGATTTTAATGCATGGGAGCGTGCATGGTTTTGTGAGCCACTGCGGATGGAACTCGGTGTTGGAGAGCATATGCAGCGGAGTGCCCATTCTGGCGTGGCCGATAATGGCGGAGCAGCCACTGAATGCCAGGTTCGTGGTGGAGGAGATCAAGGTGGGGCTGAGGGTGGAGACGTGTGACGGTTCAGTGAAAGGGTTTGTGAAGGCAGAGGGTTTGGAGAAGACGGTCAAAGAGTTGATGGTGGGAGACAAGGGGGAGGAGGTGAGGAAGAGAGTGAAGGAGTTTGCTGACATGGCAGATAAGGCTGTGAAGGAAGGTGGGTCGTCGTGGTCAACGCTGCAGTTGCTTATTGATGAGGCAACGCTGGCCAACAAGAATTTAGACAATCAGTCGGGAGGCTTCGAGCGTTTTCATTCTAATGAGAAGTGGTAA
Functional Annotation

Protein Analysis

494

Amino Acids

55.1

Weight (kDa)

5.47

Isoelectric Point (pI)

42.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 278 - 399 2.8e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 644
AccI GTMKAC 1 cut(s) 396
AccII CGCG 2 cut(s) 354, 977
AclWI GGATC 1 cut(s) 554
AcoI YGGCCR 2 cut(s) 1148, 1416
AcsI RAATTY 1 cut(s) 1426
AcyI GRCGYC 2 cut(s) 246, 375
AfiI CCNNNNNNNGG 7 cut(s) 64, 118, 274, 384, 499, 534, 978
AflIII ACRYGT 2 cut(s) 352, 1223
AgsI TTSAA 2 cut(s) 273, 998
AhdI GACNNNNNGTC 1 cut(s) 1438
AjiI CACGTC 1 cut(s) 1224
AjnI CCWGG 2 cut(s) 229, 1178
AjuI GAANNNNNNNTTGG 6 cut(s) 146, 178, 401, 433, 1094, 1126
AleI CACNNNNGTG 1 cut(s) 780
Alw21I GWGCWC 1 cut(s) 684
Alw26I GTCTC 5 cut(s) 105, 373, 962, 1214, 1290
AlwI GGATC 1 cut(s) 554
AlwNI CAGNNNCTG 1 cut(s) 1171
AoxI GGCC 6 cut(s) 40, 73, 501, 729, 1148, 1416
ApeKI GCWGC 7 cut(s) 16, 185, 404, 886, 1125, 1165, 1387
ApoI RAATTY 1 cut(s) 1426
AspS9I GGNCC 7 cut(s) 40, 199, 277, 390, 501, 743, 925
AsuHPI GGTGA 3 cut(s) 133, 517, 1324
AvaII GGWCC 5 cut(s) 199, 277, 390, 743, 925
BaeGI GKGCMC 1 cut(s) 1137
BalI TGGCCA 1 cut(s) 1418
BanII GRGCYC 2 cut(s) 337, 684
BbsI GAAGAC 2 cut(s) 130, 1277
Bbv12I GWGCWC 1 cut(s) 684
BbvCI CCTCAGC 1 cut(s) 1211
BbvI GCAGC 7 cut(s) 28, 197, 391, 898, 1137, 1177, 1374
BccI CCATC 5 cut(s) 89, 314, 584, 1092, 1282
BceAI ACGGC 1 cut(s) 113
BcgI CGANNNNNNTGC 4 cut(s) 94, 128, 386, 420
BciT130I CCWGG 2 cut(s) 231, 1180
BcoDI GTCTC 5 cut(s) 105, 373, 962, 1214, 1290
BfaI CTAG 1 cut(s) 494
BfmI CTRYAG 2 cut(s) 468, 1388
BisI GCNGC 9 cut(s) 17, 186, 189, 405, 887, 975, 1126, 1166, 1388
BlpI GCTNAGC 2 cut(s) 870, 882
BlsI GCNGC 9 cut(s) 18, 187, 190, 406, 888, 976, 1127, 1167, 1389
Bme1390I CCNGG 2 cut(s) 231, 1180
Bme18I GGWCC 5 cut(s) 199, 277, 390, 743, 925
BmeRI GACNNNNNGTC 1 cut(s) 1438
BmgBI CACGTC 1 cut(s) 1224
BmgT120I GGNCC 7 cut(s) 40, 199, 277, 390, 501, 743, 925
BmiI GGNNCC 4 cut(s) 491, 502, 744, 745
BmrFI CCNGG 2 cut(s) 231, 1180
BmsI GCATC 2 cut(s) 114, 614
BpiI GAAGAC 2 cut(s) 130, 1277
BpmI CTGGAG 1 cut(s) 845
Bpu10I CCTNAGC 2 cut(s) 117, 1211
Bpu1102I GCTNAGC 2 cut(s) 870, 882
BsaAI YACGTR 1 cut(s) 46
BsaHI GRCGYC 2 cut(s) 246, 375
BsaI GGTCTC 2 cut(s) 373, 962
BsaJI CCNNGG 3 cut(s) 229, 542, 726
BsaXI ACNNNNNCTCC 2 cut(s) 825, 855
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 118, 274, 384, 499, 534, 978
Bse118I RCCGGY 1 cut(s) 486
Bse1I ACTGG 1 cut(s) 574
BseBI CCWGG 2 cut(s) 231, 1180
BseDI CCNNGG 3 cut(s) 229, 542, 726
BseGI GGATG 6 cut(s) 81, 165, 306, 458, 605, 1103
BseLI CCNNNNNNNGG 7 cut(s) 64, 118, 274, 384, 499, 534, 978
BseMII CTCAG 6 cut(s) 131, 603, 705, 861, 873, 1202
BseNI ACTGG 1 cut(s) 574
BseRI GAGGAG 5 cut(s) 80, 842, 1063, 1208, 1322
BseSI GKGCMC 1 cut(s) 1137
BseXI GCAGC 7 cut(s) 28, 197, 391, 898, 1137, 1177, 1374
Bsh1236I CGCG 2 cut(s) 354, 977
BshFI GGCC 6 cut(s) 42, 75, 503, 731, 1150, 1418
BsiHKAI GWGCWC 1 cut(s) 684
BsiSI CCGG 1 cut(s) 487
BslFI GGGAC 3 cut(s) 135, 212, 729
BslI CCNNNNNNNGG 7 cut(s) 64, 118, 274, 384, 499, 534, 978
BsmAI GTCTC 5 cut(s) 105, 373, 962, 1214, 1290
BsmBI CGTCTC 1 cut(s) 1214
BsmFI GGGAC 3 cut(s) 135, 212, 729
BsmI GAATGC 1 cut(s) 1180
BsnI GGCC 6 cut(s) 42, 75, 503, 731, 1150, 1418
Bso31I GGTCTC 2 cut(s) 373, 962
Bsp1286I GDGCHC 3 cut(s) 337, 684, 1137
Bsp143I GATC 3 cut(s) 546, 795, 1197
Bsp1720I GCTNAGC 2 cut(s) 870, 882
BspANI GGCC 6 cut(s) 42, 75, 503, 731, 1150, 1418
BspCNI CTCAG 6 cut(s) 130, 604, 706, 862, 874, 1203
BspFNI CGCG 2 cut(s) 354, 977
BspHI TCATGA 1 cut(s) 618
BspLI GGNNCC 4 cut(s) 491, 502, 744, 745
BspMAI CTGCAG 1 cut(s) 1392
BspPI GGATC 1 cut(s) 554
BspTNI GGTCTC 2 cut(s) 373, 962
BsrBI CCGCTC 1 cut(s) 644
BsrFI RCCGGY 1 cut(s) 486
BsrI ACTGG 1 cut(s) 574
BssAI RCCGGY 1 cut(s) 486
BssECI CCNNGG 3 cut(s) 229, 542, 726
BssMI GATC 3 cut(s) 546, 795, 1197
BssNI GRCGYC 2 cut(s) 246, 375
BssT1I CCWWGG 1 cut(s) 726
Bst2UI CCWGG 2 cut(s) 231, 1180
Bst4CI ACNGT 7 cut(s) 136, 394, 529, 656, 671, 1232, 1276
Bst6I CTCTTC 3 cut(s) 287, 993, 1313
BstACI GRCGYC 2 cut(s) 246, 375
BstBAI YACGTR 1 cut(s) 46
BstC8I GCNNGC 7 cut(s) 244, 333, 488, 759, 867, 1073, 1416
BstDEI CTNAG 6 cut(s) 117, 612, 714, 870, 882, 1211
BstDSI CCRYGG 1 cut(s) 542
BstENI CCTNNNNNAGG 1 cut(s) 116
BstF5I GGATG 6 cut(s) 81, 165, 306, 458, 605, 1103
BstFNI CGCG 2 cut(s) 354, 977
BstKTI GATC 3 cut(s) 549, 798, 1200
BstMAI GTCTC 5 cut(s) 105, 373, 962, 1214, 1290
BstMBI GATC 3 cut(s) 546, 795, 1197
BstMWI GCNNNNNNNGC 8 cut(s) 22, 252, 871, 1125, 1343, 1352, 1393, 1415
BstNI CCWGG 2 cut(s) 231, 1180
BstNSI RCATGY 2 cut(s) 316, 605
BstSCI CCNGG 2 cut(s) 229, 1178
BstSFI CTRYAG 2 cut(s) 468, 1388
BstSLI GKGCMC 1 cut(s) 1137
BstUI CGCG 2 cut(s) 354, 977
BstV1I GCAGC 7 cut(s) 28, 197, 391, 898, 1137, 1177, 1374
BstV2I GAAGAC 2 cut(s) 130, 1277
BstXI CCANNNNNNTGG 1 cut(s) 1186
BsuRI GGCC 6 cut(s) 42, 75, 503, 731, 1150, 1418
BtgI CCRYGG 1 cut(s) 542
BtrI CACGTC 1 cut(s) 1224
BtsCI GGATG 6 cut(s) 81, 165, 306, 458, 605, 1103
BtsI GCAGTG 1 cut(s) 1090
BtsIMutI CAGTG 4 cut(s) 711, 1090, 1169, 1242
Cac8I GCNNGC 7 cut(s) 244, 333, 488, 759, 867, 1073, 1416
CaiI CAGNNNCTG 1 cut(s) 1171
CciI TCATGA 1 cut(s) 618
Cfr10I RCCGGY 1 cut(s) 486
Cfr13I GGNCC 7 cut(s) 40, 199, 277, 390, 501, 743, 925
CseI GACGC 2 cut(s) 235, 383
DdeI CTNAG 6 cut(s) 117, 612, 714, 870, 882, 1211
DpnI GATC 3 cut(s) 548, 797, 1199
DpnII GATC 3 cut(s) 546, 795, 1197
DriI GACNNNNNGTC 1 cut(s) 1438
EaeI YGGCCR 2 cut(s) 1148, 1416
Eam1104I CTCTTC 3 cut(s) 287, 993, 1313
Eam1105I GACNNNNNGTC 1 cut(s) 1438
EarI CTCTTC 3 cut(s) 287, 993, 1313
EciI GGCGGA 1 cut(s) 1175
Ecl136II GAGCTC 1 cut(s) 682
Eco130I CCWWGG 1 cut(s) 726
Eco147I AGGCCT 1 cut(s) 731
Eco24I GRGCYC 2 cut(s) 337, 684
Eco31I GGTCTC 2 cut(s) 373, 962
Eco32I GATATC 1 cut(s) 985
Eco47I GGWCC 5 cut(s) 199, 277, 390, 743, 925
Eco53kI GAGCTC 1 cut(s) 682
EcoICRI GAGCTC 1 cut(s) 682
EcoNI CCTNNNNNAGG 1 cut(s) 116
EcoO109I RGGNCCY 1 cut(s) 743
EcoRII CCWGG 2 cut(s) 229, 1178
EcoRV GATATC 1 cut(s) 985
EcoT14I CCWWGG 1 cut(s) 726
EcoT22I ATGCAT 2 cut(s) 607, 1065
EcoT38I GRGCYC 2 cut(s) 337, 684
ErhI CCWWGG 1 cut(s) 726
Esp3I CGTCTC 1 cut(s) 1214
FaqI GGGAC 3 cut(s) 135, 212, 729
FauI CCCGC 3 cut(s) 157, 190, 247
FauNDI CATATG 1 cut(s) 1121
FblI GTMKAC 1 cut(s) 396
Fnu4HI GCNGC 9 cut(s) 17, 186, 189, 405, 887, 975, 1126, 1166, 1388
FokI GGATG 6 cut(s) 68, 152, 293, 445, 592, 1110
FriOI GRGCYC 2 cut(s) 337, 684
Fsp4HI GCNGC 9 cut(s) 17, 186, 189, 405, 887, 975, 1126, 1166, 1388
FspBI CTAG 1 cut(s) 494
GluI GCNGC 9 cut(s) 17, 186, 189, 405, 887, 975, 1126, 1166, 1388
GsuI CTGGAG 1 cut(s) 845
HaeIII GGCC 6 cut(s) 42, 75, 503, 731, 1150, 1418
HapII CCGG 1 cut(s) 487
HgaI GACGC 2 cut(s) 235, 383
Hin1I GRCGYC 2 cut(s) 246, 375
HincII GTYRAC 5 cut(s) 397, 639, 667, 1042, 1383
HindII GTYRAC 5 cut(s) 397, 639, 667, 1042, 1383
HinfI GANTC 5 cut(s) 123, 234, 398, 506, 635
HpaII CCGG 1 cut(s) 487
HphI GGTGA 3 cut(s) 133, 517, 1324
Hpy188I TCNGA 5 cut(s) 373, 446, 511, 613, 634
Hpy188III TCNNGA 3 cut(s) 619, 799, 1443
Hpy99I CGWCG 4 cut(s) 251, 377, 398, 1378
HpyCH4III ACNGT 7 cut(s) 136, 394, 529, 656, 671, 1232, 1276
HpyCH4IV ACGT 3 cut(s) 45, 195, 1223
HpyCH4V TGCA 6 cut(s) 316, 605, 1063, 1075, 1125, 1390
HpyF10VI GCNNNNNNNGC 8 cut(s) 22, 252, 871, 1125, 1343, 1352, 1393, 1415
HpyF3I CTNAG 6 cut(s) 117, 612, 714, 870, 882, 1211
HpySE526I ACGT 3 cut(s) 45, 195, 1223
Hsp92I GRCGYC 2 cut(s) 246, 375
KflI GGGWCCC 1 cut(s) 743
KroI GCCGGC 1 cut(s) 486
KroNI GCCGGC 1 cut(s) 488
Kzo9I GATC 3 cut(s) 546, 795, 1197
LmnI GCTCC 5 cut(s) 270, 495, 894, 1068, 1162
Lsp1109I GCAGC 7 cut(s) 28, 197, 391, 898, 1137, 1177, 1374
LweI GCATC 2 cut(s) 114, 614
MaeI CTAG 1 cut(s) 494
MaeII ACGT 3 cut(s) 45, 195, 1223
MaeIII GTNAC 5 cut(s) 130, 523, 529, 553, 1226
MalI GATC 3 cut(s) 548, 797, 1199
MbiI CCGCTC 1 cut(s) 644
MboI GATC 3 cut(s) 546, 795, 1197
MboII GAAGA 7 cut(s) 100, 130, 274, 277, 1010, 1282, 1330
MhlI GDGCHC 3 cut(s) 337, 684, 1137
MlsI TGGCCA 1 cut(s) 1418
MluCI AATT 1 cut(s) 1426
MluI ACGCGT 1 cut(s) 352
MluNI TGGCCA 1 cut(s) 1418
MlyI GAGTC 4 cut(s) 117, 392, 500, 644
MmeI TCCRAC 5 cut(s) 396, 534, 622, 891, 1092
Mox20I TGGCCA 1 cut(s) 1418
Mph1103I ATGCAT 2 cut(s) 607, 1065
MroNI GCCGGC 1 cut(s) 486
MscI TGGCCA 1 cut(s) 1418
MseI TTAA 4 cut(s) 570, 753, 1029, 1058
MslI CAYNNNNRTG 4 cut(s) 24, 311, 780, 1467
Msp20I TGGCCA 1 cut(s) 1418
MspA1I CMGCKG 3 cut(s) 404, 881, 1128
MspI CCGG 1 cut(s) 487
MspR9I CCNGG 2 cut(s) 231, 1180
Mva1269I GAATGC 1 cut(s) 1180
MvaI CCWGG 2 cut(s) 231, 1180
MvnI CGCG 2 cut(s) 354, 977
MwoI GCNNNNNNNGC 8 cut(s) 22, 252, 871, 1125, 1343, 1352, 1393, 1415
NaeI GCCGGC 1 cut(s) 488
NdeI CATATG 1 cut(s) 1121
NdeII GATC 3 cut(s) 546, 795, 1197
NgoMIV GCCGGC 1 cut(s) 486
NlaIV GGNNCC 4 cut(s) 491, 502, 744, 745
NmuCI GTSAC 2 cut(s) 523, 1226
NsiI ATGCAT 2 cut(s) 607, 1065
NspI RCATGY 2 cut(s) 316, 605
OliI CACNNNNGTG 1 cut(s) 780
PagI TCATGA 1 cut(s) 618
PceI AGGCCT 1 cut(s) 731
PcsI WCGNNNNNNNCGW 2 cut(s) 132, 255
PctI GAATGC 1 cut(s) 1180
PdiI GCCGGC 1 cut(s) 488
PfeI GAWTC 1 cut(s) 234
PkrI GCNGC 9 cut(s) 18, 187, 190, 406, 888, 976, 1127, 1167, 1389
PleI GAGTC 4 cut(s) 117, 392, 500, 643
PpsI GAGTC 4 cut(s) 117, 392, 500, 643
Ppu21I YACGTR 1 cut(s) 46
PpuMI RGGWCCY 1 cut(s) 743
Psp124BI GAGCTC 1 cut(s) 684
Psp5II RGGWCCY 1 cut(s) 743
Psp6I CCWGG 2 cut(s) 229, 1178
PspGI CCWGG 2 cut(s) 229, 1178
PspN4I GGNNCC 4 cut(s) 491, 502, 744, 745
PspPI GGNCC 7 cut(s) 40, 199, 277, 390, 501, 743, 925
PspPPI RGGWCCY 1 cut(s) 743
PstI CTGCAG 1 cut(s) 1392
PstNI CAGNNNCTG 1 cut(s) 1171
PvuII CAGCTG 1 cut(s) 881
RseI CAYNNNNRTG 4 cut(s) 24, 311, 780, 1467
SacI GAGCTC 1 cut(s) 684
SalI GTCGAC 1 cut(s) 395
SaqAI TTAA 4 cut(s) 570, 753, 1029, 1058
SatI GCNGC 9 cut(s) 17, 186, 189, 405, 887, 975, 1126, 1166, 1388
Sau3AI GATC 3 cut(s) 546, 795, 1197
Sau96I GGNCC 7 cut(s) 40, 199, 277, 390, 501, 743, 925
SchI GAGTC 4 cut(s) 117, 392, 500, 644
ScrFI CCNGG 2 cut(s) 231, 1180
SduI GDGCHC 3 cut(s) 337, 684, 1137
SfaNI GCATC 2 cut(s) 114, 614
SfcI CTRYAG 2 cut(s) 468, 1388
SinI GGWCC 5 cut(s) 199, 277, 390, 743, 925
SmiMI CAYNNNNRTG 4 cut(s) 24, 311, 780, 1467
Sse9I AATT 1 cut(s) 1426
SseBI AGGCCT 1 cut(s) 731
SspMI CTAG 1 cut(s) 494
SstI GAGCTC 1 cut(s) 684
StuI AGGCCT 1 cut(s) 731
StyD4I CCNGG 2 cut(s) 229, 1178
StyI CCWWGG 1 cut(s) 726
TaaI ACNGT 7 cut(s) 136, 394, 529, 656, 671, 1232, 1276
TaiI ACGT 3 cut(s) 48, 198, 1226
TaqI TCGA 5 cut(s) 249, 327, 396, 684, 1452
TasI AATT 1 cut(s) 1426
TauI GCSGC 2 cut(s) 191, 977
TfiI GAWTC 1 cut(s) 234
Tru1I TTAA 4 cut(s) 570, 753, 1029, 1058
Tru9I TTAA 4 cut(s) 570, 753, 1029, 1058
TscAI CASTG 4 cut(s) 718, 1097, 1176, 1242
TseFI GTSAC 2 cut(s) 523, 1226
TseI GCWGC 7 cut(s) 16, 185, 404, 886, 1125, 1165, 1387
Tsp45I GTSAC 2 cut(s) 523, 1226
TspDTI ATGAA 8 cut(s) 52, 154, 352, 607, 638, 783, 801, 1451
TspGWI ACGGA 2 cut(s) 530, 531
TspRI CASTG 4 cut(s) 718, 1097, 1176, 1242
VpaK11BI GGWCC 5 cut(s) 199, 277, 390, 743, 925
XagI CCTNNNNNAGG 1 cut(s) 116
XapI RAATTY 1 cut(s) 1426
XceI RCATGY 2 cut(s) 316, 605
XcmI CCANNNNNNNNNTGG 1 cut(s) 1186
XmiI GTMKAC 1 cut(s) 396
XspI CTAG 1 cut(s) 494
Zsp2I ATGCAT 2 cut(s) 607, 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.