MD17G1036300.v1.1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
2592047 .. 2592259
213 bp
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UTR
Exon/CDS
Intron
MD17G1036300.v1.1.491

Sequence Viewer

Length: 213 bp
ATGTCTAAAGGCAACACCATCCCACTCCTCCACCTTGCCCGTCGCCTCTGCATCACCGTCTTCGCAACCCCCGCCAACCACTCGTTCATTGACCAATCCCTTGCCGACACCTCAGCCACCTTTATCTCCCTCCCCTTCCCTCAAAACATCCCCGAAATTCCCGCTGGCATCGAAAGCACCGACAAGCTTTTTTTTTTTTTTTTTTTTTTTTGA
Functional Annotation

Protein Analysis

71

Amino Acids

7.85

Weight (kDa)

5.98

Isoelectric Point (pI)

57.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 72, 162
AcsI RAATTY 1 cut(s) 156
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
AluBI AGCT 1 cut(s) 187
AluI AGCT 1 cut(s) 187
ApoI RAATTY 1 cut(s) 156
AsuHPI GGTGA 1 cut(s) 46
BbsI GAAGAC 1 cut(s) 52
BbvCI CCTCAGC 1 cut(s) 112
BccI CCATC 1 cut(s) 26
BmsI GCATC 2 cut(s) 60, 177
BpiI GAAGAC 1 cut(s) 52
Bpu10I CCTNAGC 1 cut(s) 112
BseGI GGATG 2 cut(s) 18, 147
BseMII CTCAG 1 cut(s) 126
BseRI GAGGAG 1 cut(s) 17
BspACI CCGC 2 cut(s) 72, 162
BspCNI CTCAG 1 cut(s) 125
Bst4CI ACNGT 1 cut(s) 58
BstC8I GCNNGC 1 cut(s) 166
BstDEI CTNAG 1 cut(s) 112
BstF5I GGATG 2 cut(s) 18, 147
BstMWI GCNNNNNNNGC 2 cut(s) 71, 174
BstV2I GAAGAC 1 cut(s) 52
BtsCI GGATG 2 cut(s) 18, 147
Cac8I GCNNGC 1 cut(s) 166
CviJI RGCY 2 cut(s) 116, 187
CviKI_1 RGCY 2 cut(s) 116, 187
DdeI CTNAG 1 cut(s) 112
FauI CCCGC 2 cut(s) 79, 169
FokI GGATG 2 cut(s) 5, 134
HindIII AAGCTT 1 cut(s) 185
HphI GGTGA 1 cut(s) 46
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 1 cut(s) 145
HpyCH4III ACNGT 1 cut(s) 58
HpyCH4V TGCA 1 cut(s) 51
HpyF10VI GCNNNNNNNGC 2 cut(s) 71, 174
HpyF3I CTNAG 1 cut(s) 112
LpnPI CCDG 1 cut(s) 150
LweI GCATC 2 cut(s) 60, 177
MboII GAAGA 1 cut(s) 52
MluCI AATT 1 cut(s) 156
MnlI CCTC 5 cut(s) 38, 56, 121, 140, 150
MspA1I CMGCKG 1 cut(s) 164
MwoI GCNNNNNNNGC 2 cut(s) 71, 174
PcsI WCGNNNNNNNCGW 1 cut(s) 177
SetI ASST 4 cut(s) 36, 113, 122, 189
SfaNI GCATC 2 cut(s) 60, 177
SgeI CNNG 9 cut(s) 47, 51, 83, 94, 113, 164, 173, 177, 196
Sse9I AATT 1 cut(s) 156
SsiI CCGC 2 cut(s) 72, 162
TaaI ACNGT 1 cut(s) 58
TaqI TCGA 1 cut(s) 171
TasI AATT 1 cut(s) 156
TspDTI ATGAA 1 cut(s) 76
XapI RAATTY 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.