Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001925

Physical Location & Seq

Genomic Coordinates Reverse (-)

11609073 .. 11617496

Gene Structure 8424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G27170.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3615 bp

ATGTTTATCAAGCAGGTTATAATCGAAGGATTTAAGAGTTACAAAGAGCAAGTTGCTACTGAGGAGTTTAGCAACAAAGTTAATTGTGTTGTTGGGGCAAATGGGTCTGGGAAAAGCAATTTCTTCCATGCGATTCGTTTTGTATTGAGTGACATCTACCAAAATCTGCGCAGTGAAGATAGGCATGCATTACTCCATGAAGGTGCTGGTCATCAAGTCGTGTCCGCGTTCGTGGAGATTGTGTTTGATAATTCTGACAACCGGTTCCCGGTTGATAAGGAAGAAATACGCTTGCGCAGAACAGTTGGCCTGAAGAAGGATGATTATTTCTTGGATGGGAAACACATTACAAAAGGTGAAGTTATGAATTTATTGGAGAGTGCTGGATTTTCTCGTGCTAATCCTTACTATGTTGTTCAACAAGGAAAGATAGCCTCGTTAACACTAATGAAAGACATAGAACGGTTGGATCTGCTAAAAGAGATAGGTGGTACTCGTGTTTATGAGGAGAGGCGTCGTGAGAGTTTAAGAATTATGCAGGAAACAGGAAATAAACGGAAGCAGATCATCGAAGTTGTCCACTACTTGGATGAAAGACTAAGAGAATTGGACGAAGAGAAAGAAGAACTCAGAAAATATCAACAACTTGACAAACAGAGAAAATCACTGGAATACACCATTTACGACAAAGAGCTTCACGATGCTCGGGAGAAACTGGAACAGGTAGAAGTTGCACGAACTAAGGCATCTGAAGAGTCCACAAAAATGTATGATAGAGTGGAGAAGGCCCAGGACGACTCCAAGTCTTTAGATGAATCCCTGAAAGAACTGACAAAGGAGCTTCAGACGTTATACAAGGAGAAAGAAACTGTTGAAGCTCAACAAACTAAAGCGTTAAAGAAAAAGACAAAGCTGGAGCTTGATGTGAAAGACTTTCAGGATCGAATTACTGGAAATATTCAGTCTAAGAATGATGCACTTGAGCAACTTAATACAGTGGAAAGAGAAATGCAGGATTCTTTGAGGGAACTGGAGGCGATTAAGCCTTTGTATGAAAGTCAAGTTGACAAGGAAAACCAGACATCAAAAAGAATCAATGAGCTGGAAAAAACACTTAGCATTCTTTATCAGAAACAGGGACGTGCAACTCAATTTTCAAATAAGGCTGCCCGAGATAAATGGCTCAGGAAAGAGATTGAAGATCTTAAGCGTGTTCTAGACTCAAATACTGTTCAAGAGCAAAAACTTCAGGATGAAATTCTTCGCCTCAATACTGACTTGACAGAGCGTGATGAGCACATCAAGAAACATGAAGTTGAAATTGGTGAACTGGAATCTCGTATTTCCAAGTCCCATGAACTATTCAATACTAAAAAGAGGGAGAGAGATGAAGAACAAAGAAAAAGAAAGGAAAAATGGGGAGAAGAAAGTCAACTTTCTTCTGAGATTGACAAGTTGAAAACAGAACTTGAACGGGCAAAGAAAAACCTTGATCATGCAACTCCAGGAGATGTAAGGAGAGGGCTGAACTCTATTCGACGGATTTGTGCAGACTATAGAATCAATGGAGTTTTTGGTCCACTTGTTGAGTTGGTTGATTGCGATGAAAAGTTTTTCACTGCAGTTGAAGTCACTGCTGGAAACAGCCTGTTTAACGTGGTAGTTGAGAATGATGATATTTCAACCAAGATAATTAGACACCTGAATTCTCTCAAGGGTGGACGTGTGACCTTCCTACCTCTGAATCGGATAAAGGCGCCTCGCGTCAACTATCCAAAAGATTCTGATGCAATACCTCTGCTCAAAAAGTTAAAGTTCGATTCAAAGTTTGAACCAGCATTGGGTCAGGTTTTTGGTAGAACAGTAGTATGCCGTGATCTGAATGTGGCAACAAGAGTTGCTAAGAATGATGACCTCGATTGTATAACTATGGAAGGTGACCAGGTGAGCAGAAAGGGTGGTATGACCGGTGGATTCTATGACCACAGGCGGTCAAAATTGAGATTCATGAATATAATAATGCAAAATACAAAGTCTATAAATGAGAAGGAGAAGGAACTGGAGGATGTTAGAAGGCAGCTGCAAGTGATAGATCAGCAGATTACACAGCTTGTTACTGAGCAGCAGAGACTTGAAGCAGACTGGACGCTCTGCAAATTACAGGTGGAGCAACTTAAGCAAGAGATAGCTAACGCTAATAAGCAGAAACATGCTATACATAAAGCCATTGAATATAAGGAGAAATTACTAGGTGATATTAGAACACGAATTGACCAGGTTAGATCCAGCATGTCTATGAAAGAAGCTGAAATGGGAACGGAACTTGTGGATCACCTAACTCCAGAAGAAAGGGAGCAATTGTCGAAATTAAACCCAGAAATCAAGGATCTTAAGGAAAAAAAATTTGCATACCAGGCCGATCGCATTGAGAGGGAGACAAGAAAAGCAGAGTTGGAGGCTAATATTGCTACCAACTTAAAGAGGAGAATAACTGAGTTACAGGCTACTATAGCTTCCATCGACGATGATAGTTTGCCTAGTTCAGCTGGCACAAAAGAACAGGAACTTGATGATGCAAAATTGTCGGTCAATGAGGCTGCAAAAGAGCTCAAAAGTGTCTGTGACAGCATTGATGAGAAGACAAAGCAAATCAAGAAAATTAAAGATGAGAAAGCAAAGTTAAAGACATTGGAAGATGATTGTAAAGGGACACTACAAGATTTAGATAAAAAGTTGGAGGAACTGTTTAGCCTTCGCAACACGCTCCTTGCTAAGCAAGATGAGTATACTAAGAAGATTAGGGGATTGGGTCCATTGTCATCTGACGCTTTTGACACGTATAAACGAAAAAATATCAAGGAGCTGCAGAAGATGCTACACCGGTGCAGTGAACAGCTGCAACAATTCAGCCATGTCAACAAGAAAGCGCTGGATCAATATGTGAATTTCACAGAACAGCGAGAAGAACTTCAAAATCGGCAAGCAGAGCTTGATGCAGGAGATGAGAAAATTAAAGAGCTGATAACAGTTCTGGATCAGCGGAAAGACGAATCTATAGAACGTACTTTCAAAGGGGTTGCACATCACTTCAGGGATGTATTCTCTGAGCTTGTGCAAGATGGATATGGTAACCTTATCATTATGAAGAAAAAGGATCTTGATAATGATGATGAAGATGATGATGATGATGATGGAGGTCGTGAAGCTGTTACAGAGGGAAGGGTTGAGAAATACATTGGTGTAAAAGTGAAGGTCTCGTTCACTGGTCAAGGGGAAACACAATTAATGAAACAATTGTCTGGAGGCCAAAAGACTGTTGTTGCACTCGCGTTAATCTTTGCAATCCAGCGATGTGATCCTGCACCATTCTATCTTTTTGATGAGATTGATGCAGCACTTGATCCACAGTACCGAACCGCTGTGGGAAACTTGATTCGTCGTCTTGCTGATGATTATGGCACGCAGTTCATCACCACAACTTTCCGTCCCGAGCTTGTGAGAGTCGCGGATAAGATATATGGAGTATTTCATAAGAACAGAGTGAGTATTGTGAATGTTATCTCAAAGGATCAGGCGTTGGACTTCATTGAGAAAGATCAGTCCCACGATACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000793 GO:0000819 GO:0003674 GO:0003682 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010468 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016363 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022402 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0036211 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051276 GO:0055044 GO:0060147 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098813 GO:0140096 GO:1900368 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 map04110 map04111 map04113 map04114

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

1204

Amino Acids

139.37

Weight (kDa)

6.05

Isoelectric Point (pI)

42.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_15	PF13175	1 - 301	2.9e-12	AAA ATPase domain
SMC_N	PF02463	2 - 1180	3.5e-63	RecF/RecN/SMC N terminal domain
AAA_21	PF13304	27 - 55	1e-05	AAA domain, putative AbiEii toxin, Type IV TA system
SMC_hinge	PF06470	522 - 634	2.9e-30	SMC proteins Flexible Hinge Domain
AAA_21	PF13304	1044 - 1160	3.3e-08	AAA domain, putative AbiEii toxin, Type IV TA system

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27170 AT2G27170 AT2G27170 AT2G27170
fragaria_vesca	FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061
malus_domestica	MD03G1161700.v1.1 MD11G1177700.v1.1
prunus_persica	Prupe.6G149900_v2.0.a1 Prupe.6G149900_v2.0.a1
pyrus_communis	pycom03g11460 pycom03g11470 pycom03g11480 pycom11g15150 pycom11g15160 pycom11g15170
rosa_chinensis	RchiOBHm_Chr1g0362081 RchiOBHm_Chr7g0186721 RchiOBHm_Chr7g0186731
rosa_laevigata	RLG00000004823 RLG00000027673
rosa_multiflora	Rmu_co8477933.1_g000001 Rmu_sc0010614.1_g000002 Rmu_sc0017555.1_g000001 Rmu_sc0018615.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267880 Rroxscaffold_4G00294520
rosa_rugosa	Rorug01G0293400 Rorug01G0293500 Rorug06G0475900 Rorug06G0476000 Rorug06G0476100
rosa_samantha	Rh1AG303600 Rh1BG266900 Rh1CG285000 Rh1DG296900 Rh7AG064800 Rh7BG081000 Rh7CG082800 Rh7DG083900
rosa_wichuraiana	Rw1G027040 Rw7G007200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	20
Acc16I	TGCGCA	2 cut(s)	170, 296
Acc36I	ACCTGC	1 cut(s)	4
AccB1I	GGYRCC	1 cut(s)	1756
AccB7I	CCANNNNNTGG	1 cut(s)	586
AccI	GTMKAC	1 cut(s)	2786
AccII	CGCG	4 cut(s)	227, 1764, 3329, 3506
AciI	CCGC	5 cut(s)	225, 1990, 3040, 3417, 3506
AcsI	RAATTY	5 cut(s)	367, 1257, 1705, 2402, 2944
AcuI	CTGAAG	5 cut(s)	332, 771, 827, 1232, 3073
AcyI	GRCGYC	2 cut(s)	514, 1757
AfaI	GTAC	3 cut(s)	493, 3064, 3410
AfeI	AGCGCT	1 cut(s)	2928
AfiI	CCNNNNNNNGG	4 cut(s)	268, 316, 586, 1841
AflII	CTTAAG	3 cut(s)	1205, 2174, 2390
AflIII	ACRYGT	2 cut(s)	1723, 2835
AgeI	ACCGGT	3 cut(s)	261, 1967, 2880
AhdI	GACNNNNNGTC	1 cut(s)	802
AjiI	CACGTC	2 cut(s)	1142, 1724
AjnI	CCWGG	5 cut(s)	789, 1504, 1941, 2274, 2412
AjuI	GAANNNNNNNTTGG	2 cut(s)	1305, 1337
Alw21I	GWGCWC	2 cut(s)	1299, 2610
Alw26I	GTCTC	3 cut(s)	2122, 2429, 3259
Ama87I	CYCGRG	3 cut(s)	705, 1170, 3488
Aor51HI	AGCGCT	1 cut(s)	2928
AoxI	GGCC	4 cut(s)	307, 786, 2415, 3304
ApeKI	GCWGC	8 cut(s)	1166, 2077, 2080, 2122, 2597, 2863, 2896, 3392
ApoI	RAATTY	5 cut(s)	367, 1257, 1705, 2402, 2944
AseI	ATTAAT	1 cut(s)	3284
AsiGI	ACCGGT	3 cut(s)	261, 1967, 2880
Asp700I	GAANNNNTTC	2 cut(s)	1260, 2967
AspLEI	GCGC	4 cut(s)	171, 297, 1759, 2929
AspS9I	GGNCC	3 cut(s)	787, 1577, 2810
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	7 cut(s)	368, 1337, 1949, 1957, 2264, 2324, 3463
AvaI	CYCGRG	3 cut(s)	705, 1170, 3488
AvaII	GGWCC	2 cut(s)	1577, 2810
BaeI	ACNNNNGTAYC	2 cut(s)	483, 516
BanI	GGYRCC	1 cut(s)	1756
BanII	GRGCYC	1 cut(s)	2610
BauI	CACGAG	2 cut(s)	393, 495
BbsI	GAAGAC	1 cut(s)	2645
Bbv12I	GWGCWC	2 cut(s)	1299, 2610
BbvI	GCAGC	8 cut(s)	1153, 2067, 2089, 2134, 2584, 2850, 2883, 3404
BccI	CCATC	4 cut(s)	329, 2525, 3113, 3185
BceAI	ACGGC	1 cut(s)	1857
BcgI	CGANNNNNNTGC	2 cut(s)	2565, 2599
BciT130I	CCWGG	5 cut(s)	791, 1506, 1943, 2276, 2414
BclI	TGATCA	1 cut(s)	1492
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	3 cut(s)	2122, 2429, 3259
BfaI	CTAG	3 cut(s)	1217, 2249, 2538
BfmI	CTRYAG	5 cut(s)	1555, 1620, 2508, 2864, 3054
BfoI	RGCGCY	2 cut(s)	1760, 2930
BfrI	CTTAAG	3 cut(s)	1205, 2174, 2390
BfuAI	ACCTGC	1 cut(s)	4
BglII	AGATCT	1 cut(s)	1201
BisI	GCNGC	8 cut(s)	1167, 2078, 2081, 2123, 2598, 2864, 2897, 3393
BlpI	GCTNAGC	1 cut(s)	2772
BlsI	GCNGC	8 cut(s)	1168, 2079, 2082, 2124, 2599, 2865, 2898, 3394
Bme1390I	CCNGG	6 cut(s)	269, 791, 1506, 1943, 2276, 2414
Bme18I	GGWCC	2 cut(s)	1577, 2810
BmeRI	GACNNNNNGTC	1 cut(s)	802
BmeT110I	CYCGRG	3 cut(s)	705, 1170, 3488
BmgBI	CACGTC	2 cut(s)	1142, 1724
BmgT120I	GGNCC	3 cut(s)	787, 1577, 2810
BmiI	GGNNCC	3 cut(s)	266, 1758, 2811
BmrFI	CCNGG	6 cut(s)	269, 791, 1506, 1943, 2276, 2414
BmsI	GCATC	8 cut(s)	691, 755, 964, 1777, 2563, 2862, 2983, 3379
BpiI	GAAGAC	1 cut(s)	2645
BpmI	CTGGAG	6 cut(s)	935, 1052, 1488, 2081, 2325, 3321
Bpu10I	CCTNAGC	1 cut(s)	1184
Bpu1102I	GCTNAGC	1 cut(s)	2772
BpuEI	CTTGAG	2 cut(s)	1001, 1697
BpuMI	CCSGG	1 cut(s)	269
BsaAI	YACGTR	1 cut(s)	2838
BsaHI	GRCGYC	2 cut(s)	514, 1757
BsaI	GGTCTC	1 cut(s)	3259
BsaJI	CCNNGG	1 cut(s)	789
BsaWI	WCCGGW	3 cut(s)	261, 1967, 2880
BsaXI	ACNNNNNCTCC	6 cut(s)	227, 257, 2345, 2375, 2729, 2759
Bsc4I	CCNNNNNNNGG	4 cut(s)	268, 316, 586, 1841
Bse118I	RCCGGY	3 cut(s)	261, 1967, 2880
Bse1I	ACTGG	8 cut(s)	672, 720, 955, 1035, 1335, 2064, 2147, 3268
BseBI	CCWGG	5 cut(s)	791, 1506, 1943, 2276, 2414
BseDI	CCNNGG	1 cut(s)	789
BseGI	GGATG	6 cut(s)	325, 340, 595, 1258, 2071, 3100
BseLI	CCNNNNNNNGG	4 cut(s)	268, 316, 586, 1841
BseMII	CTCAG	7 cut(s)	51, 643, 1198, 1434, 2109, 2484, 3096
BseNI	ACTGG	8 cut(s)	672, 720, 955, 1035, 1335, 2064, 2147, 3268
BseRI	GAGGAG	3 cut(s)	77, 521, 2497
BseXI	GCAGC	8 cut(s)	1153, 2067, 2089, 2134, 2584, 2850, 2883, 3404
BsgI	GTGCAG	3 cut(s)	1569, 2905, 3345
Bsh1236I	CGCG	4 cut(s)	227, 1764, 3329, 3506
Bsh1285I	CGRYCG	1 cut(s)	2422
BshFI	GGCC	4 cut(s)	309, 788, 2417, 3306
BshNI	GGYRCC	1 cut(s)	1756
BshTI	ACCGGT	3 cut(s)	261, 1967, 2880
BsiEI	CGRYCG	1 cut(s)	2422
BsiHKAI	GWGCWC	2 cut(s)	1299, 2610
BsiHKCI	CYCGRG	3 cut(s)	705, 1170, 3488
BsiSI	CCGG	4 cut(s)	262, 269, 1968, 2881
BslFI	GGGAC	5 cut(s)	1152, 1336, 2722, 3471, 3586
BslI	CCNNNNNNNGG	4 cut(s)	268, 316, 586, 1841
BsmAI	GTCTC	3 cut(s)	2122, 2429, 3259
BsmFI	GGGAC	5 cut(s)	1152, 1336, 2722, 3471, 3586
BsmI	GAATGC	1 cut(s)	1119
BsnI	GGCC	4 cut(s)	309, 788, 2417, 3306
Bso31I	GGTCTC	1 cut(s)	3259
BsoBI	CYCGRG	3 cut(s)	705, 1170, 3488
Bsp1286I	GDGCHC	2 cut(s)	1299, 2610
Bsp1720I	GCTNAGC	1 cut(s)	2772
BspACI	CCGC	5 cut(s)	225, 1990, 3040, 3417, 3506
BspANI	GGCC	4 cut(s)	309, 788, 2417, 3306
BspCNI	CTCAG	7 cut(s)	52, 642, 1197, 1435, 2110, 2485, 3097
BspFNI	CGCG	4 cut(s)	227, 1764, 3329, 3506
BspHI	TCATGA	1 cut(s)	2007
BspLI	GGNNCC	3 cut(s)	266, 1758, 2811
BspMAI	CTGCAG	2 cut(s)	1624, 2868
BspMI	ACCTGC	1 cut(s)	4
BspT107I	GGYRCC	1 cut(s)	1756
BspTI	CTTAAG	3 cut(s)	1205, 2174, 2390
BspTNI	GGTCTC	1 cut(s)	3259
BsrFI	RCCGGY	3 cut(s)	261, 1967, 2880
BsrI	ACTGG	8 cut(s)	672, 720, 955, 1035, 1335, 2064, 2147, 3268
BssAI	RCCGGY	3 cut(s)	261, 1967, 2880
BssECI	CCNNGG	1 cut(s)	789
BssNAI	GTATAC	1 cut(s)	2787
BssNI	GRCGYC	2 cut(s)	514, 1757
BssSI	CACGAG	2 cut(s)	393, 495
Bst1107I	GTATAC	1 cut(s)	2787
Bst2BI	CACGAG	2 cut(s)	393, 495
Bst2UI	CCWGG	5 cut(s)	791, 1506, 1943, 2276, 2414
Bst6I	CTCTTC	2 cut(s)	609, 747
BstACI	GRCGYC	2 cut(s)	514, 1757
BstAFI	CTTAAG	3 cut(s)	1205, 2174, 2390
BstAPI	GCANNNNNTGC	1 cut(s)	2872
BstBAI	YACGTR	1 cut(s)	2838
BstC8I	GCNNGC	5 cut(s)	186, 293, 2548, 2982, 3461
BstEII	GGTNACC	2 cut(s)	1937, 3128
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	6 cut(s)	325, 340, 595, 1258, 2071, 3100
BstFNI	CGCG	4 cut(s)	227, 1764, 3329, 3506
BstH2I	RGCGCY	2 cut(s)	1760, 2930
BstHHI	GCGC	4 cut(s)	171, 297, 1759, 2929
BstMAI	GTCTC	3 cut(s)	2122, 2429, 3259
BstMCI	CGRYCG	1 cut(s)	2422
BstMWI	GCNNNNNNNGC	7 cut(s)	1294, 2176, 2414, 2465, 2510, 2872, 2986
BstNI	CCWGG	5 cut(s)	791, 1506, 1943, 2276, 2414
BstNSI	RCATGY	3 cut(s)	188, 2213, 2293
BstPI	GGTNACC	2 cut(s)	1937, 3128
BstSCI	CCNGG	6 cut(s)	267, 789, 1504, 1941, 2274, 2412
BstSFI	CTRYAG	5 cut(s)	1555, 1620, 2508, 2864, 3054
BstUI	CGCG	4 cut(s)	227, 1764, 3329, 3506
BstV1I	GCAGC	8 cut(s)	1153, 2067, 2089, 2134, 2584, 2850, 2883, 3404
BstV2I	GAAGAC	1 cut(s)	2645
BstX2I	RGATCY	5 cut(s)	469, 1201, 2282, 2386, 3154
BstYI	RGATCY	5 cut(s)	469, 1201, 2282, 2386, 3154
BstZ17I	GTATAC	1 cut(s)	2787
BsuRI	GGCC	4 cut(s)	309, 788, 2417, 3306
BtgZI	GCGATG	2 cut(s)	1617, 3364
BtrI	CACGTC	2 cut(s)	1142, 1724
BtsCI	GGATG	6 cut(s)	325, 340, 595, 1258, 2071, 3100
BtsI	GCAGTG	4 cut(s)	178, 1617, 1632, 2893
BtsIMutI	CAGTG	7 cut(s)	178, 665, 1002, 1617, 1632, 2893, 3261
BveI	ACCTGC	1 cut(s)	4
Cac8I	GCNNGC	5 cut(s)	186, 293, 2548, 2982, 3461
CciI	TCATGA	1 cut(s)	2007
CfoI	GCGC	4 cut(s)	171, 297, 1759, 2929
Cfr10I	RCCGGY	3 cut(s)	261, 1967, 2880
Cfr13I	GGNCC	3 cut(s)	787, 1577, 2810
CseI	GACGC	4 cut(s)	503, 1753, 2155, 2834
CsiI	ACCWGGT	2 cut(s)	1941, 2274
Csp6I	GTAC	3 cut(s)	492, 3063, 3409
CspAI	ACCGGT	3 cut(s)	261, 1967, 2880
CviQI	GTAC	3 cut(s)	492, 3063, 3409
DinI	GGCGCC	1 cut(s)	1758
DriI	GACNNNNNGTC	1 cut(s)	802
Eam1104I	CTCTTC	2 cut(s)	609, 747
Eam1105I	GACNNNNNGTC	1 cut(s)	802
EarI	CTCTTC	2 cut(s)	609, 747
Ecl136II	GAGCTC	1 cut(s)	2608
Eco24I	GRGCYC	1 cut(s)	2610
Eco31I	GGTCTC	1 cut(s)	3259
Eco47I	GGWCC	2 cut(s)	1577, 2810
Eco47III	AGCGCT	1 cut(s)	2928
Eco53kI	GAGCTC	1 cut(s)	2608
Eco57I	CTGAAG	5 cut(s)	332, 771, 827, 1232, 3073
Eco88I	CYCGRG	3 cut(s)	705, 1170, 3488
Eco91I	GGTNACC	2 cut(s)	1937, 3128
EcoICRI	GAGCTC	1 cut(s)	2608
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoO65I	GGTNACC	2 cut(s)	1937, 3128
EcoRI	GAATTC	1 cut(s)	1705
EcoRII	CCWGG	5 cut(s)	789, 1504, 1941, 2274, 2412
EcoT22I	ATGCAT	1 cut(s)	190
EcoT38I	GRGCYC	1 cut(s)	2610
EgeI	GGCGCC	1 cut(s)	1758
EheI	GGCGCC	1 cut(s)	1758
FalI	AAGNNNNNCTT	2 cut(s)	2973, 3005
FaqI	GGGAC	5 cut(s)	1152, 1336, 2722, 3471, 3586
FbaI	TGATCA	1 cut(s)	1492
FblI	GTMKAC	1 cut(s)	2786
Fnu4HI	GCNGC	8 cut(s)	1167, 2078, 2081, 2123, 2598, 2864, 2897, 3393
FokI	GGATG	6 cut(s)	332, 347, 602, 1265, 2078, 3107
FriOI	GRGCYC	1 cut(s)	2610
Fsp4HI	GCNGC	8 cut(s)	1167, 2078, 2081, 2123, 2598, 2864, 2897, 3393
FspBI	CTAG	3 cut(s)	1217, 2249, 2538
FspI	TGCGCA	2 cut(s)	170, 296
GlaI	GCGC	4 cut(s)	170, 296, 1758, 2928
GluI	GCNGC	8 cut(s)	1167, 2078, 2081, 2123, 2598, 2864, 2897, 3393
GsuI	CTGGAG	6 cut(s)	935, 1052, 1488, 2081, 2325, 3321
HaeII	RGCGCY	2 cut(s)	1760, 2930
HaeIII	GGCC	4 cut(s)	309, 788, 2417, 3306
HapII	CCGG	4 cut(s)	262, 269, 1968, 2881
HgaI	GACGC	4 cut(s)	503, 1753, 2155, 2834
HhaI	GCGC	4 cut(s)	171, 297, 1759, 2929
Hin1I	GRCGYC	2 cut(s)	514, 1757
Hin6I	GCGC	4 cut(s)	169, 295, 1757, 2927
HinP1I	GCGC	4 cut(s)	169, 295, 1757, 2927
HincII	GTYRAC	5 cut(s)	441, 1066, 1433, 1768, 2917
HindII	GTYRAC	5 cut(s)	441, 1066, 1433, 1768, 2917
HpaI	GTTAAC	1 cut(s)	441
HpaII	CCGG	4 cut(s)	262, 269, 1968, 2881
HphI	GGTGA	7 cut(s)	368, 1337, 1949, 1957, 2264, 2324, 3463
Hpy99I	CGWCG	4 cut(s)	519, 1542, 2525, 3441
HpyCH4IV	ACGT	6 cut(s)	848, 1141, 1656, 1723, 2837, 3061
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1294, 2176, 2414, 2465, 2510, 2872, 2986
HpySE526I	ACGT	6 cut(s)	848, 1141, 1656, 1723, 2837, 3061
Hsp92I	GRCGYC	2 cut(s)	514, 1757
HspAI	GCGC	4 cut(s)	169, 295, 1757, 2927
KasI	GGCGCC	1 cut(s)	1756
Ksp22I	TGATCA	1 cut(s)	1492
KspAI	GTTAAC	1 cut(s)	441
LmnI	GCTCC	6 cut(s)	838, 916, 2167, 2353, 2769, 2860
Lsp1109I	GCAGC	8 cut(s)	1153, 2067, 2089, 2134, 2584, 2850, 2883, 3404
LweI	GCATC	8 cut(s)	691, 755, 964, 1777, 2563, 2862, 2983, 3379
MabI	ACCWGGT	2 cut(s)	1941, 2274
MaeI	CTAG	3 cut(s)	1217, 2249, 2538
MaeII	ACGT	6 cut(s)	848, 1141, 1656, 1723, 2837, 3061
MfeI	CAATTG	2 cut(s)	2357, 3293
MflI	RGATCY	5 cut(s)	469, 1201, 2282, 2386, 3154
MhlI	GDGCHC	2 cut(s)	1299, 2610
Mly113I	GGCGCC	1 cut(s)	1757
MlyI	GAGTC	4 cut(s)	764, 791, 1214, 3510
MmeI	TCCRAC	4 cut(s)	447, 2433, 2715, 3558
Mph1103I	ATGCAT	1 cut(s)	190
MroXI	GAANNNNTTC	2 cut(s)	1260, 2967
MslI	CAYNNNNRTG	3 cut(s)	201, 764, 2294
MspA1I	CMGCKG	5 cut(s)	2080, 2546, 2896, 3040, 3419
MspCI	CTTAAG	3 cut(s)	1205, 2174, 2390
MspI	CCGG	4 cut(s)	262, 269, 1968, 2881
MspR9I	CCNGG	6 cut(s)	269, 791, 1506, 1943, 2276, 2414
MunI	CAATTG	2 cut(s)	2357, 3293
Mva1269I	GAATGC	1 cut(s)	1119
MvaI	CCWGG	5 cut(s)	791, 1506, 1943, 2276, 2414
MvnI	CGCG	4 cut(s)	227, 1764, 3329, 3506
MwoI	GCNNNNNNNGC	7 cut(s)	1294, 2176, 2414, 2465, 2510, 2872, 2986
NarI	GGCGCC	1 cut(s)	1757
NciI	CCSGG	1 cut(s)	269
NlaIV	GGNNCC	3 cut(s)	266, 1758, 2811
NmuCI	GTSAC	5 cut(s)	149, 1630, 1726, 1937, 2621
NsbI	TGCGCA	2 cut(s)	170, 296
NsiI	ATGCAT	1 cut(s)	190
NspI	RCATGY	3 cut(s)	188, 2213, 2293
PaeI	GCATGC	1 cut(s)	188
PagI	TCATGA	1 cut(s)	2007
PctI	GAATGC	1 cut(s)	1119
PdmI	GAANNNNTTC	2 cut(s)	1260, 2967
PflMI	CCANNNNNTGG	1 cut(s)	586
PfoI	TCCNGGA	1 cut(s)	1504
PinAI	ACCGGT	3 cut(s)	261, 1967, 2880
PkrI	GCNGC	8 cut(s)	1168, 2079, 2082, 2124, 2599, 2865, 2898, 3394
Ple19I	CGATCG	1 cut(s)	2422
PleI	GAGTC	4 cut(s)	763, 791, 1214, 3509
PluTI	GGCGCC	1 cut(s)	1760
PpsI	GAGTC	4 cut(s)	763, 791, 1214, 3509
Ppu21I	YACGTR	1 cut(s)	2838
PshBI	ATTAAT	1 cut(s)	3284
PsiI	TTATAA	1 cut(s)	20
Psp124BI	GAGCTC	1 cut(s)	2610
Psp6I	CCWGG	5 cut(s)	789, 1504, 1941, 2274, 2412
PspEI	GGTNACC	2 cut(s)	1937, 3128
PspGI	CCWGG	5 cut(s)	789, 1504, 1941, 2274, 2412
PspN4I	GGNNCC	3 cut(s)	266, 1758, 2811
PspPI	GGNCC	3 cut(s)	787, 1577, 2810
PstI	CTGCAG	2 cut(s)	1624, 2868
PsuI	RGATCY	5 cut(s)	469, 1201, 2282, 2386, 3154
PvuI	CGATCG	1 cut(s)	2422
PvuII	CAGCTG	3 cut(s)	2080, 2546, 2896
RsaI	GTAC	3 cut(s)	493, 3064, 3410
RsaNI	GTAC	3 cut(s)	492, 3063, 3409
RseI	CAYNNNNRTG	3 cut(s)	201, 764, 2294
SacI	GAGCTC	1 cut(s)	2610
SatI	GCNGC	8 cut(s)	1167, 2078, 2081, 2123, 2598, 2864, 2897, 3393
Sau96I	GGNCC	3 cut(s)	787, 1577, 2810
SchI	GAGTC	4 cut(s)	764, 791, 1214, 3510
ScrFI	CCNGG	6 cut(s)	269, 791, 1506, 1943, 2276, 2414
SduI	GDGCHC	2 cut(s)	1299, 2610
SexAI	ACCWGGT	2 cut(s)	1941, 2274
SfaNI	GCATC	8 cut(s)	691, 755, 964, 1777, 2563, 2862, 2983, 3379
SfcI	CTRYAG	5 cut(s)	1555, 1620, 2508, 2864, 3054
SfoI	GGCGCC	1 cut(s)	1758
SgrAI	CRCCGGYG	1 cut(s)	2880
SinI	GGWCC	2 cut(s)	1577, 2810
SmiMI	CAYNNNNRTG	3 cut(s)	201, 764, 2294
SmlI	CTYRAG	5 cut(s)	980, 1205, 1712, 2174, 2390
SmoI	CTYRAG	5 cut(s)	980, 1205, 1712, 2174, 2390
SphI	GCATGC	1 cut(s)	188
SsiI	CCGC	5 cut(s)	225, 1990, 3040, 3417, 3506
SspDI	GGCGCC	1 cut(s)	1756
SspI	AATATT	2 cut(s)	958, 2464
SspMI	CTAG	3 cut(s)	1217, 2249, 2538
SstI	GAGCTC	1 cut(s)	2610
StyD4I	CCNGG	6 cut(s)	267, 789, 1504, 1941, 2274, 2412
TaiI	ACGT	6 cut(s)	851, 1144, 1659, 1726, 2840, 3064
TaqI	TCGA	8 cut(s)	24, 570, 943, 1537, 1818, 1917, 2363, 2520
TaqII	GACCGA	1 cut(s)	2575
TscAI	CASTG	7 cut(s)	178, 672, 1002, 1624, 1639, 2893, 3268
TseFI	GTSAC	5 cut(s)	149, 1630, 1726, 1937, 2621
TseI	GCWGC	8 cut(s)	1166, 2077, 2080, 2122, 2597, 2863, 2896, 3392
Tsp45I	GTSAC	5 cut(s)	149, 1630, 1726, 1937, 2621
TspGWI	ACGGA	4 cut(s)	571, 1555, 2333, 3473
TspRI	CASTG	7 cut(s)	178, 672, 1002, 1624, 1639, 2893, 3268
Van91I	CCANNNNNTGG	1 cut(s)	586
Vha464I	CTTAAG	3 cut(s)	1205, 2174, 2390
VpaK11BI	GGWCC	2 cut(s)	1577, 2810
VspI	ATTAAT	1 cut(s)	3284
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	5 cut(s)	367, 1257, 1705, 2402, 2944
XbaI	TCTAGA	1 cut(s)	1216
XceI	RCATGY	3 cut(s)	188, 2213, 2293
XcmI	CCANNNNNNNNNTGG	1 cut(s)	203
XmiI	GTMKAC	1 cut(s)	2786
XmnI	GAANNNNTTC	2 cut(s)	1260, 2967
XspI	CTAG	3 cut(s)	1217, 2249, 2538
Zsp2I	ATGCAT	1 cut(s)	190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.