Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0001925

Physical Location & Seq

Genomic Coordinates Forward (+)

15749881 .. 15757648

Gene Structure 7768 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g15160.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGTTGTGCAGCAAGGAAAGAGCATCCTTGACACTGATGAAAGACTCTGAACGGCTGGATTTGCTGAAGGAAATTGGTGGTACTCGAGTGTATGAGGAGAGGCGCCGAGAAAGTTTGAAAATTATGCAGGAAACTGGAAACAAAATAAAACAGATAGTTCAAGTTGTTCAGTACTTGGATGAGAGATTAAAGGAGTTGGATGAAGAGAAAGAGGAACTAAGACAGTATCAGCAATTTGACAAGCAGCGGAAATCTTTAGAATACACTATTTATGACAAGGAACTTCAGGATGCTCGCCAAAAGTTGGCAGAGGTAGAAGATGCTAGAAATAAGGTTTCTGAAACTTCAACAAAGATGTATAATACTGTGCTGGATGCCCATGAAAAGTCTAAGGAACTGGACAAGATTTTGAAAGATCTGACAAAAGAGCTTCAAACTTTAGATAAGGAAAAAGAAGCAATAGAAAAGCGAAGGACAGAAGCAATAAAGAAGCGCACAGAGCTTCAGCTTGATGTCAACGATTTGGAGGAGAAGAAAACTGGAAATACCCGTGCCAAAGAAGACGCTATGAAACAGCTGCAGAGTCTGCAGAAAGAAATTACGGATTCAGAGGAAGAACTTAAGAAAATAAATCCTCTGTATGATAATCAAGTCAAGATGGAAATGGAGATAACAAAAGGAATAATGGAACGCGAGAAGCAGCTTAGCATACTGTACCAAAAACAAGGCCGTGCCACCCAGTTTTCAAGTAAAGCTGCTCGTGACAAATGGCTCCAAAAGGAAATTGATGATCTTGAGCGAGTTCTTTCTTCAAATTTGGCACAGGAGCAAAAACTTATGGTTGAAATTGCACGGCTTGATGCTGAGTTGAGCGACCGGGATGTCTACATTGAGTCTCGAAGAACTGAGATTGCTACTATTGAATCTCTCATCTCTCAGTCACATGATGGGTTCAATCATCACAAGACACAGAGGGACAAGCTGCAGGACGAACGCAAGTCCCTGTGGAGGAAAGAAACTGAACTTTCTGCTGAAATTGAGAAGCTGAGAGCAGAAGTTGAAAAGGCTGAAAAGAGCCTTGATCATGCAACTCCGGGTGATGTGAGGAGAGGGCTAAATTCTGTTCGTAAGATTTGCAGAGAGTATAACATTCGTGGGGTATTTGGTCCTATCATTGAGTTGCTTGATTGTGACGAAAAGTTTTTTACTGCCGTTGAAGTAACTGCTGGGAACAGCTTGTTTCACGTTGTGGTTGAGAATGATGAAATATCAACCCAGATAATTAGGCACCTTAATTCATTGAAAGGTGGACGTGTTACGTTTATCCCCCTCAATAGGGTGAAGGCTCCACGGGTCACTTATCCACAGAATTCAGATGTGGTTCCTCTGTTAAAGAAATTAAAATTTGCTCCGAACTATACCCCGGCATTTTCCCAGGTATTTGCAAGAACAGTTGTTTGTCGAGACCTTGATGTGGCTACAAGGGTTGCTCGTAATGATGGTCTAGACTGCATTACTTTGGAAGGTGACCAAGTCAGCAAGAAGGGGGGTATGACGGGAGGATTTTATGACCATAGACGATCAAAATTGAAGTTTATGCATATAATAATGCAGAATACAAAATCTATTAACATGAAGGAAGAAGAGCTGGAGAAAGTGAAGAAAATGCTTGAAGACAGAAGTATTACAGAACTCGTAACTGAACAGCAGAAAATTGATGCTAAGCGGGCCCATGACAAATCAGAACTGGAACAACTTAAGCAGGACATTGCTAATGCTAATAAGCAGAAGAATCTGATTTCCAAAGCCTGTGGGAATAAGAAAAAATCACTGGCGGATGTGGAGACTCAAATTACTCAGCTTAGAGCCAGTATGGCCATGAAGAGAGCTGAAATGGGCACAGATCGATCATTGATCATTTATCTCCAGATGAGAAGGATCTTCTTTCAAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000793 GO:0000819 GO:0003674 GO:0003682 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010468 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016363 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022402 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0036211 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051276 GO:0055044 GO:0060147 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098813 GO:0140096 GO:1900368 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 map04110 map04111 map04113 map04114

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

652

Amino Acids

75.73

Weight (kDa)

8.6

Isoelectric Point (pI)

51.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27170 AT2G27170 AT2G27170 AT2G27170
fragaria_vesca	FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061
malus_domestica	MD03G1161700.v1.1 MD11G1177700.v1.1
prunus_persica	Prupe.6G149900_v2.0.a1 Prupe.6G149900_v2.0.a1
pyrus_communis	pycom03g11460 pycom03g11470 pycom03g11480 pycom11g15150 pycom11g15160 pycom11g15170
rosa_chinensis	RchiOBHm_Chr1g0362081 RchiOBHm_Chr7g0186721 RchiOBHm_Chr7g0186731
rosa_laevigata	RLG00000004823 RLG00000027673
rosa_multiflora	Rmu_co8477933.1_g000001 Rmu_sc0010614.1_g000002 Rmu_sc0017555.1_g000001 Rmu_sc0018615.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267880 Rroxscaffold_4G00294520
rosa_rugosa	Rorug01G0293400 Rorug01G0293500 Rorug06G0475900 Rorug06G0476000 Rorug06G0476100
rosa_samantha	Rh1AG303600 Rh1BG266900 Rh1CG285000 Rh1DG296900 Rh7AG064800 Rh7BG081000 Rh7CG082800 Rh7DG083900
rosa_wichuraiana	Rw1G027040 Rw7G007200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	881
AccB1I	GGYRCC	2 cut(s)	102, 1287
AccB7I	CCANNNNNTGG	1 cut(s)	304
AccI	GTMKAC	1 cut(s)	885
AccII	CGCG	1 cut(s)	693
AciI	CCGC	3 cut(s)	247, 1726, 1835
AclWI	GGATC	1 cut(s)	1946
AcoI	YGGCCR	1 cut(s)	1875
AcsI	RAATTY	4 cut(s)	814, 1117, 1369, 1403
AcuI	CTGAAG	3 cut(s)	86, 269, 488
AcyI	GRCGYC	1 cut(s)	103
AdeI	CACNNNGTG	1 cut(s)	1249
AfaI	GTAC	3 cut(s)	82, 173, 716
AfiI	CCNNNNNNNGG	5 cut(s)	304, 1008, 1335, 1336, 1474
AflII	CTTAAG	2 cut(s)	620, 1757
AflIII	ACRYGT	1 cut(s)	1312
AjiI	CACGTC	1 cut(s)	1313
AjnI	CCWGG	1 cut(s)	1434
Alw26I	GTCTC	3 cut(s)	900, 1458, 1838
AlwI	GGATC	1 cut(s)	1946
AlwNI	CAGNNNCTG	1 cut(s)	586
Ama87I	CYCGRG	1 cut(s)	84
AoxI	GGCC	3 cut(s)	727, 1728, 1875
ApaI	GGGCCC	1 cut(s)	1732
ApeKI	GCWGC	6 cut(s)	9, 244, 577, 700, 755, 982
ApoI	RAATTY	4 cut(s)	814, 1117, 1369, 1403
AspLEI	GCGC	2 cut(s)	105, 495
AspS9I	GGNCC	3 cut(s)	1166, 1728, 1729
AsuC2I	CCSGG	3 cut(s)	878, 1095, 1424
AsuHPI	GGTGA	3 cut(s)	1109, 1351, 1538
AvaI	CYCGRG	1 cut(s)	84
AvaII	GGWCC	1 cut(s)	1166
BaeGI	GKGCMC	2 cut(s)	1732, 1901
BaeI	ACNNNNGTAYC	2 cut(s)	72, 105
BalI	TGGCCA	1 cut(s)	1877
BanI	GGYRCC	2 cut(s)	102, 1287
BanII	GRGCYC	1 cut(s)	1732
BauI	CACGAG	1 cut(s)	759
BbsI	GAAGAC	2 cut(s)	567, 1680
BbvI	GCAGC	6 cut(s)	21, 256, 564, 712, 742, 969
BccI	CCATC	3 cut(s)	652, 941, 1493
BceAI	ACGGC	4 cut(s)	68, 714, 869, 1196
BciT130I	CCWGG	1 cut(s)	1436
BclI	TGATCA	2 cut(s)	1081, 1914
BcnI	CCSGG	3 cut(s)	878, 1095, 1424
BcoDI	GTCTC	3 cut(s)	900, 1458, 1838
BfaI	CTAG	2 cut(s)	324, 1505
BfmI	CTRYAG	3 cut(s)	578, 587, 983
BfoI	RGCGCY	1 cut(s)	106
BfrI	CTTAAG	2 cut(s)	620, 1757
BglI	GCCNNNNNGGC	1 cut(s)	1874
BglII	AGATCT	1 cut(s)	415
BisI	GCNGC	6 cut(s)	10, 245, 578, 701, 756, 983
BlpI	GCTNAGC	2 cut(s)	704, 1722
BlsI	GCNGC	6 cut(s)	11, 246, 579, 702, 757, 984
BmcAI	AGTACT	1 cut(s)	173
Bme1390I	CCNGG	4 cut(s)	878, 1095, 1424, 1436
Bme18I	GGWCC	1 cut(s)	1166
BmeT110I	CYCGRG	1 cut(s)	84
BmgBI	CACGTC	1 cut(s)	1313
BmgT120I	GGNCC	3 cut(s)	1166, 1728, 1729
BmiI	GGNNCC	6 cut(s)	104, 773, 1289, 1347, 1383, 1730
BmrFI	CCNGG	4 cut(s)	878, 1095, 1424, 1436
BmrI	ACTGGG	1 cut(s)	733
BmsI	GCATC	6 cut(s)	32, 280, 310, 364, 850, 1708
BmuI	ACTGGG	1 cut(s)	733
BpiI	GAAGAC	2 cut(s)	567, 1680
BpmI	CTGGAG	2 cut(s)	1670, 1910
Bpu1102I	GCTNAGC	2 cut(s)	704, 1722
BpuEI	CTTGAG	1 cut(s)	815
BpuMI	CCSGG	3 cut(s)	878, 1095, 1424
Bsa29I	ATCGAT	1 cut(s)	1906
BsaHI	GRCGYC	1 cut(s)	103
BsaI	GGTCTC	1 cut(s)	1458
BsaJI	CCNNGG	3 cut(s)	1349, 1422, 1434
Bsc4I	CCNNNNNNNGG	5 cut(s)	304, 1008, 1335, 1336, 1474
Bse1I	ACTGG	7 cut(s)	139, 402, 544, 739, 1752, 1836, 1869
Bse3DI	GCAATG	1 cut(s)	1767
BseBI	CCWGG	1 cut(s)	1436
BseCI	ATCGAT	1 cut(s)	1906
BseDI	CCNNGG	3 cut(s)	1349, 1422, 1434
BseGI	GGATG	7 cut(s)	23, 184, 205, 295, 379, 886, 1843
BseLI	CCNNNNNNNGG	5 cut(s)	304, 1008, 1335, 1336, 1474
BseMI	GCAATG	1 cut(s)	1767
BseMII	CTCAG	5 cut(s)	855, 897, 950, 1037, 1871
BseNI	ACTGG	7 cut(s)	139, 402, 544, 739, 1752, 1836, 1869
BseRI	GAGGAG	3 cut(s)	110, 542, 1120
BseSI	GKGCMC	2 cut(s)	1732, 1901
BseXI	GCAGC	6 cut(s)	21, 256, 564, 712, 742, 969
BseYI	CCCAGC	1 cut(s)	1226
BsgI	GTGCAG	1 cut(s)	28
Bsh1236I	CGCG	1 cut(s)	693
Bsh1285I	CGRYCG	1 cut(s)	877
BshFI	GGCC	3 cut(s)	729, 1730, 1877
BshNI	GGYRCC	2 cut(s)	102, 1287
BshVI	ATCGAT	1 cut(s)	1906
BsiEI	CGRYCG	1 cut(s)	877
BsiHKCI	CYCGRG	1 cut(s)	84
BsiSI	CCGG	3 cut(s)	877, 1094, 1424
BslFI	GGGAC	2 cut(s)	985, 989
BslI	CCNNNNNNNGG	5 cut(s)	304, 1008, 1335, 1336, 1474
BsmAI	GTCTC	3 cut(s)	900, 1458, 1838
BsmFI	GGGAC	2 cut(s)	985, 989
BsnI	GGCC	3 cut(s)	729, 1730, 1877
Bso31I	GGTCTC	1 cut(s)	1458
BsoBI	CYCGRG	1 cut(s)	84
Bsp120I	GGGCCC	1 cut(s)	1728
Bsp1286I	GDGCHC	2 cut(s)	1732, 1901
Bsp143I	GATC	8 cut(s)	415, 790, 1081, 1580, 1903, 1907, 1914, 1938
Bsp1720I	GCTNAGC	2 cut(s)	704, 1722
BspACI	CCGC	3 cut(s)	247, 1726, 1835
BspANI	GGCC	3 cut(s)	729, 1730, 1877
BspCNI	CTCAG	5 cut(s)	856, 898, 949, 1038, 1870
BspDI	ATCGAT	1 cut(s)	1906
BspFNI	CGCG	1 cut(s)	693
BspLI	GGNNCC	6 cut(s)	104, 773, 1289, 1347, 1383, 1730
BspMAI	CTGCAG	3 cut(s)	582, 591, 987
BspPI	GGATC	1 cut(s)	1946
BspQI	GCTCTTC	1 cut(s)	1638
BspT107I	GGYRCC	2 cut(s)	102, 1287
BspTI	CTTAAG	2 cut(s)	620, 1757
BspTNI	GGTCTC	1 cut(s)	1458
BsrDI	GCAATG	1 cut(s)	1767
BsrI	ACTGG	7 cut(s)	139, 402, 544, 739, 1752, 1836, 1869
BssECI	CCNNGG	3 cut(s)	1349, 1422, 1434
BssMI	GATC	8 cut(s)	415, 790, 1081, 1580, 1903, 1907, 1914, 1938
BssNI	GRCGYC	1 cut(s)	103
BssSI	CACGAG	1 cut(s)	759
Bst2BI	CACGAG	1 cut(s)	759
Bst2UI	CCWGG	1 cut(s)	1436
Bst4CI	ACNGT	4 cut(s)	225, 367, 714, 1453
Bst6I	CTCTTC	3 cut(s)	198, 1638, 1877
BstACI	GRCGYC	1 cut(s)	103
BstAFI	CTTAAG	2 cut(s)	620, 1757
BstAPI	GCANNNNNTGC	1 cut(s)	586
BstC8I	GCNNGC	2 cut(s)	295, 1728
BstDSI	CCRYGG	1 cut(s)	1349
BstEII	GGTNACC	1 cut(s)	1526
BstF5I	GGATG	7 cut(s)	23, 184, 205, 295, 379, 886, 1843
BstFNI	CGCG	1 cut(s)	693
BstH2I	RGCGCY	1 cut(s)	106
BstHHI	GCGC	2 cut(s)	105, 495
BstKTI	GATC	8 cut(s)	418, 793, 1084, 1583, 1906, 1910, 1917, 1941
BstMAI	GTCTC	3 cut(s)	900, 1458, 1838
BstMBI	GATC	8 cut(s)	415, 790, 1081, 1580, 1903, 1907, 1914, 1938
BstMCI	CGRYCG	1 cut(s)	877
BstMWI	GCNNNNNNNGC	5 cut(s)	61, 499, 586, 1727, 1874
BstNI	CCWGG	1 cut(s)	1436
BstPI	GGTNACC	1 cut(s)	1526
BstSCI	CCNGG	4 cut(s)	876, 1093, 1422, 1434
BstSFI	CTRYAG	3 cut(s)	578, 587, 983
BstSLI	GKGCMC	2 cut(s)	1732, 1901
BstUI	CGCG	1 cut(s)	693
BstV1I	GCAGC	6 cut(s)	21, 256, 564, 712, 742, 969
BstV2I	GAAGAC	2 cut(s)	567, 1680
BstX2I	RGATCY	2 cut(s)	415, 1938
BstYI	RGATCY	2 cut(s)	415, 1938
Bsu15I	ATCGAT	1 cut(s)	1906
BsuRI	GGCC	3 cut(s)	729, 1730, 1877
BsuTUI	ATCGAT	1 cut(s)	1906
BtgI	CCRYGG	1 cut(s)	1349
BtrI	CACGTC	1 cut(s)	1313
BtsCI	GGATG	7 cut(s)	23, 184, 205, 295, 379, 886, 1843
BtsIMutI	CAGTG	2 cut(s)	32, 1829
Cac8I	GCNNGC	2 cut(s)	295, 1728
CaiI	CAGNNNCTG	1 cut(s)	586
CfoI	GCGC	2 cut(s)	105, 495
Cfr13I	GGNCC	3 cut(s)	1166, 1728, 1729
ClaI	ATCGAT	1 cut(s)	1906
CseI	GACGC	1 cut(s)	572
Csp6I	GTAC	3 cut(s)	81, 172, 715
CspCI	CAANNNNNGTGG	2 cut(s)	1792, 1827
CviAII	CATG	6 cut(s)	380, 944, 1085, 1633, 1733, 1879
CviQI	GTAC	3 cut(s)	81, 172, 715
DinI	GGCGCC	1 cut(s)	104
DpnI	GATC	8 cut(s)	417, 792, 1083, 1582, 1905, 1909, 1916, 1940
DpnII	GATC	8 cut(s)	415, 790, 1081, 1580, 1903, 1907, 1914, 1938
DraIII	CACNNNGTG	1 cut(s)	1249
DrdI	GACNNNNNNGTC	1 cut(s)	881
DseDI	GACNNNNNNGTC	1 cut(s)	881
EaeI	YGGCCR	1 cut(s)	1875
Eam1104I	CTCTTC	3 cut(s)	198, 1638, 1877
EarI	CTCTTC	3 cut(s)	198, 1638, 1877
EciI	GGCGGA	1 cut(s)	1850
Eco24I	GRGCYC	1 cut(s)	1732
Eco31I	GGTCTC	1 cut(s)	1458
Eco47I	GGWCC	1 cut(s)	1166
Eco57I	CTGAAG	3 cut(s)	86, 269, 488
Eco88I	CYCGRG	1 cut(s)	84
Eco91I	GGTNACC	1 cut(s)	1526
EcoO65I	GGTNACC	1 cut(s)	1526
EcoRI	GAATTC	1 cut(s)	1369
EcoRII	CCWGG	1 cut(s)	1434
EcoT22I	ATGCAT	1 cut(s)	1602
EcoT38I	GRGCYC	1 cut(s)	1732
EgeI	GGCGCC	1 cut(s)	104
EheI	GGCGCC	1 cut(s)	104
FaeI	CATG	6 cut(s)	383, 947, 1088, 1636, 1736, 1882
FaqI	GGGAC	2 cut(s)	985, 989
FatI	CATG	6 cut(s)	379, 943, 1084, 1632, 1732, 1878
FauI	CCCGC	1 cut(s)	1719
FbaI	TGATCA	2 cut(s)	1081, 1914
FblI	GTMKAC	1 cut(s)	885
Fnu4HI	GCNGC	6 cut(s)	10, 245, 578, 701, 756, 983
FokI	GGATG	7 cut(s)	10, 191, 212, 302, 386, 893, 1850
FriOI	GRGCYC	1 cut(s)	1732
Fsp4HI	GCNGC	6 cut(s)	10, 245, 578, 701, 756, 983
FspBI	CTAG	2 cut(s)	324, 1505
GlaI	GCGC	2 cut(s)	104, 494
GluI	GCNGC	6 cut(s)	10, 245, 578, 701, 756, 983
GsaI	CCCAGC	1 cut(s)	1230
GsuI	CTGGAG	2 cut(s)	1670, 1910
HaeII	RGCGCY	1 cut(s)	106
HaeIII	GGCC	3 cut(s)	729, 1730, 1877
HapII	CCGG	3 cut(s)	877, 1094, 1424
HgaI	GACGC	1 cut(s)	572
HhaI	GCGC	2 cut(s)	105, 495
Hin1I	GRCGYC	1 cut(s)	103
Hin1II	CATG	6 cut(s)	383, 947, 1088, 1636, 1736, 1882
Hin6I	GCGC	2 cut(s)	103, 493
HinP1I	GCGC	2 cut(s)	103, 493
HincII	GTYRAC	1 cut(s)	517
HindII	GTYRAC	1 cut(s)	517
HinfI	GANTC	7 cut(s)	44, 583, 605, 893, 923, 1792, 1846
HpaII	CCGG	3 cut(s)	877, 1094, 1424
HphI	GGTGA	3 cut(s)	1109, 1351, 1538
Hpy166II	GTNNAC	3 cut(s)	517, 886, 1310
Hpy188I	TCNGA	8 cut(s)	49, 340, 420, 610, 1375, 1413, 1744, 1797
Hpy188III	TCNNGA	9 cut(s)	287, 655, 761, 794, 897, 1463, 1505, 1927, 1949
Hpy8I	GTNNAC	3 cut(s)	517, 886, 1310
HpyAV	CCTTC	7 cut(s)	61, 465, 1336, 1517, 1537, 1630, 1929
HpyCH4III	ACNGT	4 cut(s)	225, 367, 714, 1453
HpyCH4IV	ACGT	3 cut(s)	1245, 1312, 1319
HpyF10VI	GCNNNNNNNGC	5 cut(s)	61, 499, 586, 1727, 1874
HpySE526I	ACGT	3 cut(s)	1245, 1312, 1319
Hsp92I	GRCGYC	1 cut(s)	103
Hsp92II	CATG	6 cut(s)	383, 947, 1088, 1636, 1736, 1882
HspAI	GCGC	2 cut(s)	103, 493
KasI	GGCGCC	1 cut(s)	102
Ksp22I	TGATCA	2 cut(s)	1081, 1914
Kzo9I	GATC	8 cut(s)	415, 790, 1081, 1580, 1903, 1907, 1914, 1938
LguI	GCTCTTC	1 cut(s)	1638
LmnI	GCTCC	4 cut(s)	777, 826, 1351, 1414
Lsp1109I	GCAGC	6 cut(s)	21, 256, 564, 712, 742, 969
LweI	GCATC	6 cut(s)	32, 280, 310, 364, 850, 1708
MaeI	CTAG	2 cut(s)	324, 1505
MaeII	ACGT	3 cut(s)	1245, 1312, 1319
MaeIII	GTNAC	8 cut(s)	761, 939, 1190, 1219, 1315, 1354, 1526, 1696
MalI	GATC	8 cut(s)	417, 792, 1083, 1582, 1905, 1909, 1916, 1940
MboI	GATC	8 cut(s)	415, 790, 1081, 1580, 1903, 1907, 1914, 1938
MflI	RGATCY	2 cut(s)	415, 1938
MhlI	GDGCHC	2 cut(s)	1732, 1901
MlsI	TGGCCA	1 cut(s)	1877
MluNI	TGGCCA	1 cut(s)	1877
Mly113I	GGCGCC	1 cut(s)	103
MlyI	GAGTC	4 cut(s)	38, 592, 902, 1840
MmeI	TCCRAC	1 cut(s)	177
Mox20I	TGGCCA	1 cut(s)	1877
Mph1103I	ATGCAT	1 cut(s)	1602
MscI	TGGCCA	1 cut(s)	1877
MseI	TTAA	8 cut(s)	188, 621, 1293, 1391, 1400, 1629, 1758, 1954
Msp20I	TGGCCA	1 cut(s)	1877
MspA1I	CMGCKG	2 cut(s)	247, 577
MspCI	CTTAAG	2 cut(s)	620, 1757
MspI	CCGG	3 cut(s)	877, 1094, 1424
MspR9I	CCNGG	4 cut(s)	878, 1095, 1424, 1436
MvaI	CCWGG	1 cut(s)	1436
MvnI	CGCG	1 cut(s)	693
MwoI	GCNNNNNNNGC	5 cut(s)	61, 499, 586, 1727, 1874
NarI	GGCGCC	1 cut(s)	103
NciI	CCSGG	3 cut(s)	878, 1095, 1424
NdeII	GATC	8 cut(s)	415, 790, 1081, 1580, 1903, 1907, 1914, 1938
NlaIII	CATG	6 cut(s)	383, 947, 1088, 1636, 1736, 1882
NlaIV	GGNNCC	6 cut(s)	104, 773, 1289, 1347, 1383, 1730
NmeAIII	GCCGAG	1 cut(s)	131
NmuCI	GTSAC	5 cut(s)	761, 939, 1190, 1354, 1526
NsiI	ATGCAT	1 cut(s)	1602
PaeR7I	CTCGAG	1 cut(s)	84
PciSI	GCTCTTC	1 cut(s)	1638
PfeI	GAWTC	3 cut(s)	605, 923, 1792
PflFI	GACNNNGTC	1 cut(s)	1532
PflMI	CCANNNNNTGG	1 cut(s)	304
PkrI	GCNGC	6 cut(s)	11, 246, 579, 702, 757, 984
PleI	GAGTC	4 cut(s)	38, 591, 901, 1840
PluTI	GGCGCC	1 cut(s)	106
PpsI	GAGTC	4 cut(s)	38, 591, 901, 1840
Psp6I	CCWGG	1 cut(s)	1434
PspEI	GGTNACC	1 cut(s)	1526
PspFI	CCCAGC	1 cut(s)	1226
PspGI	CCWGG	1 cut(s)	1434
PspN4I	GGNNCC	6 cut(s)	104, 773, 1289, 1347, 1383, 1730
PspOMI	GGGCCC	1 cut(s)	1728
PspPI	GGNCC	3 cut(s)	1166, 1728, 1729
PspXI	VCTCGAGB	1 cut(s)	84
PstI	CTGCAG	3 cut(s)	582, 591, 987
PstNI	CAGNNNCTG	1 cut(s)	586
PsuI	RGATCY	2 cut(s)	415, 1938
PsyI	GACNNNGTC	1 cut(s)	1532
PvuII	CAGCTG	1 cut(s)	577
RsaI	GTAC	3 cut(s)	82, 173, 716
RsaNI	GTAC	3 cut(s)	81, 172, 715
SapI	GCTCTTC	1 cut(s)	1638
SaqAI	TTAA	8 cut(s)	188, 621, 1293, 1391, 1400, 1629, 1758, 1954
SatI	GCNGC	6 cut(s)	10, 245, 578, 701, 756, 983
Sau3AI	GATC	8 cut(s)	415, 790, 1081, 1580, 1903, 1907, 1914, 1938
Sau96I	GGNCC	3 cut(s)	1166, 1728, 1729
ScaI	AGTACT	1 cut(s)	173
SchI	GAGTC	4 cut(s)	38, 592, 902, 1840
ScrFI	CCNGG	4 cut(s)	878, 1095, 1424, 1436
SduI	GDGCHC	2 cut(s)	1732, 1901
SfaNI	GCATC	6 cut(s)	32, 280, 310, 364, 850, 1708
SfcI	CTRYAG	3 cut(s)	578, 587, 983
SfoI	GGCGCC	1 cut(s)	104
Sfr274I	CTCGAG	1 cut(s)	84
SinI	GGWCC	1 cut(s)	1166
SlaI	CTCGAG	1 cut(s)	84
SmlI	CTYRAG	4 cut(s)	84, 620, 794, 1757
SmoI	CTYRAG	4 cut(s)	84, 620, 794, 1757
SsiI	CCGC	3 cut(s)	247, 1726, 1835
SspDI	GGCGCC	1 cut(s)	102
SspMI	CTAG	2 cut(s)	324, 1505
StyD4I	CCNGG	4 cut(s)	876, 1093, 1422, 1434
TaaI	ACNGT	4 cut(s)	225, 367, 714, 1453
TaiI	ACGT	3 cut(s)	1248, 1315, 1322
TaqI	TCGA	4 cut(s)	85, 898, 1462, 1906
TatI	WGTACW	1 cut(s)	171
TfiI	GAWTC	3 cut(s)	605, 923, 1792
Tru1I	TTAA	8 cut(s)	188, 621, 1293, 1391, 1400, 1629, 1758, 1954
Tru9I	TTAA	8 cut(s)	188, 621, 1293, 1391, 1400, 1629, 1758, 1954
TscAI	CASTG	2 cut(s)	39, 1836
TseFI	GTSAC	5 cut(s)	761, 939, 1190, 1354, 1526
TseI	GCWGC	6 cut(s)	9, 244, 577, 700, 755, 982
Tsp45I	GTSAC	5 cut(s)	761, 939, 1190, 1354, 1526
TspDTI	ATGAA	8 cut(s)	53, 216, 396, 584, 1278, 1287, 1649, 1895
TspGWI	ACGGA	1 cut(s)	617
TspRI	CASTG	2 cut(s)	39, 1836
Tth111I	GACNNNGTC	1 cut(s)	1532
Van91I	CCANNNNNTGG	1 cut(s)	304
Vha464I	CTTAAG	2 cut(s)	620, 1757
VpaK11BI	GGWCC	1 cut(s)	1166
XapI	RAATTY	4 cut(s)	814, 1117, 1369, 1403
XbaI	TCTAGA	1 cut(s)	1504
XhoI	CTCGAG	1 cut(s)	84
XmiI	GTMKAC	1 cut(s)	885
XspI	CTAG	2 cut(s)	324, 1505
ZrmI	AGTACT	1 cut(s)	173
Zsp2I	ATGCAT	1 cut(s)	1602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.