Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010614.1

Orthogroup ID

OG0001925

Physical Location & Seq

Genomic Coordinates Forward (+)

7681 .. 16719

Gene Structure 9039 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010614.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

atgaaagattctgagcgactggatttacttaaggaaatcggtggcactcgagtgtatgaggagagatgtcaagaaagtttgaaaatcatgcaggacactggtagcaaaagaaagcagataattcaagttgttcagtacttggatgagagattaaaggaactggacgaagagaaagaggaacttagaaagtatcagcagcttgacaagcagcgaaaatctctggagtacactatatatgacaaggaacttcaggatgctcgccaaaggctgacagaggtagaagacgctcgaaataagctttctgaaacatcaacgcaaaagtataatagcgtgctggaggcgcatgacaagtccaaggacttggataagactttgaaagatctgacaaaagagctacaagctttaaataaagagaaagaagcagtagaaaagcgaagaacagaagcaacaaagaaacacacagagcttgagcttgatgtcaaagatctacaggagaagatatctggaaacatccgagccaaagaggatgctatgaaacaactacaaagtctgcagaaagaaattcaggattcaatggatgagcttgagaagataagtcctctgtatgagaatcaagtcatgagggaaaaggagatgacaaagggaataatggagcgcgagaagcagcttagcatactttatcaaaaacaaggtcgtgcgacccagtttccaagtaaagctgctcgtgacaaatggcttcaaaaggaaattgatgatcttgaacgagttctttcttcaaatttggcacaggagaaaaagcttcaggatgaagtcaaacgtcttaattctgagttgaatgagcagggtacttacattggatctcaaagaaatgaaattactaccatggagtgtgtcatctctcagttacgtgaagggttcagtcattataaagcacagagggacaagatgaaggatgagcacaatactctatggaagaaagaaactgaactttctgctgaaattgagaaactgagaacagaagttgagaaggcagagaagagccttgatcatgcaactcctggtgatgtgaggagagggctaaattctgttcgtaagatctgcagagagcataatactcctggggtatttggctgtgttattgagctgcttgattgtgaagaaaagttatttactgcagtggacgttgctgctgggaacagcttatttcatgttgtggttgaaaatgatgatatatcaactcagataatcaggcaccttaattcactgaaaggtggccgtgttacgtttatccctctgactagggtgacggctccaagggtaacttatccacaaaattcagatctggttcctttgttgaagaggttaaaatttcttccaaagtacactgctgcatttgctcaggtatttgcaagaacagttctttgtcgagatctggatgtggccacaaaggttgctcataccgatggtctagactgcatcactttagaagatcttgaaactaagctggggaaaattgatgctgagcgagctcacagcaaattaaaactggaacagcttaagcaggacattgtgaatgctaataagaaggaaagtttaatttcaaaagcacttgggaataaggaaaaatcacttgctgatgtgcagactcaaattgatcagcttagagctagtatggccatgaagagggctgaaatggtcactgatctcattgatcatttgactccaaaggagaaggatcttctctcaagattgaatcctgaaatagcagatcttaaagagaagcttattacatgcaaggcggatcgaactgagaacttggaagacaactatgagaggacatttcaggatgtagccaaggagctagagcagcaactgagtaaaagaaatatgtatcttgctaaacaagaagagtactcaaagaaaatccgggaattgggtgcattgtcatcagatgcttttgaaacgtataagcgaaggaacatcaaagaactacataaaatgctgcacagatgcaatgagcaactgcaacagtttagtcatgtcaacaagaaagcacttgaccagtatgtaaattttacagaacaacgtgaagaactccagagaaggcaagctgaactggatgcaggtgatgagaaaattgcagaactcatatctttcttagatcaaaggaaggatgaatcaatagaacgcacttttaaaggtgttgctaggaactttcgagaagttttctctgaacttgtgcaaggtggccatggtcaccttctcatggtgaaaagaaaggatggtaaccatgctgacgatgatctggatgaggatgatggaccaggggaaacagatagatctgagaaatatattggtgtgaaagtaaaggtttcttttaccgggcaaggagagactcagtccatgaagcagttgtctgggggtcagaaaactgttgttgcattgacgcttatctttgcaatacagcaatgtgatcctgctcctttctatcttttcgatgaaatagatgcagcgctggatcttcagtacagaactgctgttggaagtatcctttatgtcgtactttgtggattctatattcttctgaagttgatttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000793 GO:0000819 GO:0003674 GO:0003682 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010468 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016363 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022402 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0036211 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051276 GO:0055044 GO:0060147 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098813 GO:0140096 GO:1900368 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 map04110 map04111 map04113 map04114

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

865

Amino Acids

99.87

Weight (kDa)

6.03

Isoelectric Point (pI)

41.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27170 AT2G27170 AT2G27170 AT2G27170
fragaria_vesca	FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061
malus_domestica	MD03G1161700.v1.1 MD11G1177700.v1.1
prunus_persica	Prupe.6G149900_v2.0.a1 Prupe.6G149900_v2.0.a1
pyrus_communis	pycom03g11460 pycom03g11470 pycom03g11480 pycom11g15150 pycom11g15160 pycom11g15170
rosa_chinensis	RchiOBHm_Chr1g0362081 RchiOBHm_Chr7g0186721 RchiOBHm_Chr7g0186731
rosa_laevigata	RLG00000004823 RLG00000027673
rosa_multiflora	Rmu_co8477933.1_g000001 Rmu_sc0010614.1_g000002 Rmu_sc0017555.1_g000001 Rmu_sc0018615.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267880 Rroxscaffold_4G00294520
rosa_rugosa	Rorug01G0293400 Rorug01G0293500 Rorug06G0475900 Rorug06G0476000 Rorug06G0476100
rosa_samantha	Rh1AG303600 Rh1BG266900 Rh1CG285000 Rh1DG296900 Rh7AG064800 Rh7BG081000 Rh7CG082800 Rh7DG083900
rosa_wichuraiana	Rw1G027040 Rw7G007200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	927
AarI	CACCTGC	1 cut(s)	2114
Acc36I	ACCTGC	1 cut(s)	2114
AccB1I	GGYRCC	1 cut(s)	1251
AccII	CGCG	1 cut(s)	657
AciI	CCGC	1 cut(s)	1799
AclWI	GGATC	5 cut(s)	865, 1743, 1809, 2468, 2526
AcoI	YGGCCR	4 cut(s)	1273, 1440, 1674, 2248
AcsI	RAATTY	6 cut(s)	561, 778, 1081, 1333, 1367, 2071
AcuI	CTGAAG	3 cut(s)	233, 785, 2507
AfaI	GTAC	7 cut(s)	137, 227, 847, 1382, 1913, 2528, 2562
AfeI	AGCGCT	1 cut(s)	2514
AfiI	CCNNNNNNNGG	3 cut(s)	1683, 1933, 2266
AflII	CTTAAG	2 cut(s)	29, 1556
AjnI	CCWGG	3 cut(s)	1057, 1117, 2323
AleI	CACNNNNGTG	1 cut(s)	50
Alw21I	GWGCWC	2 cut(s)	960, 1531
Alw26I	GTCTC	1 cut(s)	2387
AlwI	GGATC	5 cut(s)	865, 1743, 1809, 2468, 2526
AlwNI	CAGNNNCTG	1 cut(s)	1873
Ama87I	CYCGRG	1 cut(s)	48
Aor51HI	AGCGCT	1 cut(s)	2514
AoxI	GGCC	4 cut(s)	1273, 1440, 1674, 2248
ApoI	RAATTY	6 cut(s)	561, 778, 1081, 1333, 1367, 2071
ArsI	GACNNNNNNTTYG	2 cut(s)	676, 708
Asp700I	GAANNNNTTC	1 cut(s)	765
AspLEI	GCGC	3 cut(s)	343, 657, 2515
AspS9I	GGNCC	1 cut(s)	2321
AsuC2I	CCSGG	2 cut(s)	1928, 2383
AsuHPI	GGTGA	5 cut(s)	1073, 1315, 2138, 2249, 2281
AvaI	CYCGRG	1 cut(s)	48
AvaII	GGWCC	1 cut(s)	2321
BalI	TGGCCA	3 cut(s)	1442, 1676, 2250
BanI	GGYRCC	1 cut(s)	1251
BanII	GRGCYC	1 cut(s)	1531
BauI	CACGAG	1 cut(s)	723
BbsI	GAAGAC	2 cut(s)	288, 1827
Bbv12I	GWGCWC	2 cut(s)	960, 1531
BccI	CCATC	3 cut(s)	1457, 2276, 2312
BceAI	ACGGC	2 cut(s)	1260, 1323
BciT130I	CCWGG	3 cut(s)	1059, 1119, 2325
BciVI	GTATCC	1 cut(s)	2558
BclI	TGATCA	3 cut(s)	1045, 1654, 1711
BcnI	CCSGG	2 cut(s)	1928, 2383
BcoDI	GTCTC	1 cut(s)	2387
BfaI	CTAG	5 cut(s)	1299, 1469, 1668, 1862, 2208
BfmI	CTRYAG	4 cut(s)	488, 551, 1099, 1173
BfoI	RGCGCY	1 cut(s)	2516
BfrI	CTTAAG	2 cut(s)	29, 1556
BfuAI	ACCTGC	1 cut(s)	2114
BfuI	GTATCC	1 cut(s)	2558
BglII	AGATCT	8 cut(s)	379, 484, 1095, 1339, 1429, 1489, 1768, 2339
BlpI	GCTNAGC	2 cut(s)	668, 1521
BmcAI	AGTACT	2 cut(s)	137, 1913
Bme1390I	CCNGG	5 cut(s)	1059, 1119, 1928, 2325, 2383
Bme18I	GGWCC	1 cut(s)	2321
BmeT110I	CYCGRG	1 cut(s)	48
BmgT120I	GGNCC	1 cut(s)	2321
BmiI	GGNNCC	3 cut(s)	1253, 1311, 1347
BmrFI	CCNGG	5 cut(s)	1059, 1119, 1928, 2325, 2383
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	8 cut(s)	244, 517, 1485, 1507, 1942, 2000, 2110, 2497
BmuI	ACTGGG	1 cut(s)	697
BpiI	GAAGAC	2 cut(s)	288, 1827
BpmI	CTGGAG	3 cut(s)	242, 356, 2081
Bpu10I	CCTNAGC	1 cut(s)	1398
Bpu1102I	GCTNAGC	2 cut(s)	668, 1521
BpuEI	CTTGAG	3 cut(s)	488, 605, 1729
BpuMI	CCSGG	2 cut(s)	1928, 2383
BsaAI	YACGTR	1 cut(s)	908
BsaJI	CCNNGG	7 cut(s)	354, 882, 1118, 1313, 1854, 2251, 2324
Bsc4I	CCNNNNNNNGG	3 cut(s)	1683, 1933, 2266
Bse1I	ACTGG	7 cut(s)	24, 103, 165, 703, 1551, 2062, 2121
Bse3DI	GCAATG	2 cut(s)	2020, 2474
BseBI	CCWGG	3 cut(s)	1059, 1119, 2325
BseDI	CCNNGG	7 cut(s)	354, 882, 1118, 1313, 1854, 2251, 2324
BseLI	CCNNNNNNNGG	3 cut(s)	1683, 1933, 2266
BseMI	GCAATG	2 cut(s)	2020, 2474
BseNI	ACTGG	7 cut(s)	24, 103, 165, 703, 1551, 2062, 2121
BseRI	GAGGAG	2 cut(s)	74, 1084
BseYI	CCCAGC	2 cut(s)	1190, 1504
BsgI	GTGCAG	2 cut(s)	1661, 1988
Bsh1236I	CGCG	1 cut(s)	657
BshFI	GGCC	4 cut(s)	1275, 1442, 1676, 2250
BshNI	GGYRCC	1 cut(s)	1251
BsiHKAI	GWGCWC	2 cut(s)	960, 1531
BsiHKCI	CYCGRG	1 cut(s)	48
BsiSI	CCGG	2 cut(s)	1927, 2382
BslFI	GGGAC	1 cut(s)	953
BslI	CCNNNNNNNGG	3 cut(s)	1683, 1933, 2266
BsmAI	GTCTC	1 cut(s)	2387
BsmFI	GGGAC	1 cut(s)	953
BsmI	GAATGC	1 cut(s)	1579
BsnI	GGCC	4 cut(s)	1275, 1442, 1676, 2250
BsoBI	CYCGRG	1 cut(s)	48
Bsp1286I	GDGCHC	2 cut(s)	960, 1531
Bsp1720I	GCTNAGC	2 cut(s)	668, 1521
Bsp19I	CCATGG	2 cut(s)	882, 2251
BspACI	CCGC	1 cut(s)	1799
BspANI	GGCC	4 cut(s)	1275, 1442, 1676, 2250
BspFNI	CGCG	1 cut(s)	657
BspHI	TCATGA	1 cut(s)	618
BspLI	GGNNCC	3 cut(s)	1253, 1311, 1347
BspMAI	CTGCAG	3 cut(s)	555, 1103, 1177
BspMI	ACCTGC	1 cut(s)	2114
BspPI	GGATC	5 cut(s)	865, 1743, 1809, 2468, 2526
BspQI	GCTCTTC	1 cut(s)	1031
BspT107I	GGYRCC	1 cut(s)	1251
BspTI	CTTAAG	2 cut(s)	29, 1556
BsrDI	GCAATG	2 cut(s)	2020, 2474
BsrI	ACTGG	7 cut(s)	24, 103, 165, 703, 1551, 2062, 2121
BssECI	CCNNGG	7 cut(s)	354, 882, 1118, 1313, 1854, 2251, 2324
BssSI	CACGAG	1 cut(s)	723
BssT1I	CCWWGG	5 cut(s)	354, 882, 1313, 1854, 2251
Bst2BI	CACGAG	1 cut(s)	723
Bst2UI	CCWGG	3 cut(s)	1059, 1119, 2325
Bst4CI	ACNGT	3 cut(s)	1417, 2031, 2434
Bst6I	CTCTTC	5 cut(s)	162, 1031, 1352, 1676, 1902
BstAFI	CTTAAG	2 cut(s)	29, 1556
BstBAI	YACGTR	1 cut(s)	908
BstC8I	GCNNGC	4 cut(s)	259, 332, 1527, 2109
BstDSI	CCRYGG	2 cut(s)	882, 2251
BstEII	GGTNACC	2 cut(s)	2255, 2285
BstFNI	CGCG	1 cut(s)	657
BstH2I	RGCGCY	1 cut(s)	2516
BstHHI	GCGC	3 cut(s)	343, 657, 2515
BstMAI	GTCTC	1 cut(s)	2387
BstMWI	GCNNNNNNNGC	7 cut(s)	205, 340, 661, 1394, 1526, 1673, 1867
BstNI	CCWGG	3 cut(s)	1059, 1119, 2325
BstNSI	RCATGY	1 cut(s)	1794
BstPI	GGTNACC	2 cut(s)	2255, 2285
BstSCI	CCNGG	5 cut(s)	1057, 1117, 1926, 2323, 2381
BstSFI	CTRYAG	4 cut(s)	488, 551, 1099, 1173
BstUI	CGCG	1 cut(s)	657
BstV2I	GAAGAC	2 cut(s)	288, 1827
BstXI	CCANNNNNNTGG	1 cut(s)	361
BsuI	GTATCC	1 cut(s)	2558
BsuRI	GGCC	4 cut(s)	1275, 1442, 1676, 2250
BtgI	CCRYGG	2 cut(s)	882, 2251
BtsI	GCAGTG	2 cut(s)	1182, 1383
BtsIMutI	CAGTG	5 cut(s)	96, 1182, 1262, 1383, 1698
BveI	ACCTGC	1 cut(s)	2114
Cac8I	GCNNGC	4 cut(s)	259, 332, 1527, 2109
CaiI	CAGNNNCTG	1 cut(s)	1873
CciI	TCATGA	1 cut(s)	618
CfoI	GCGC	3 cut(s)	343, 657, 2515
Cfr13I	GGNCC	1 cut(s)	2321
CseI	GACGC	2 cut(s)	293, 2455
Csp6I	GTAC	7 cut(s)	136, 226, 846, 1381, 1912, 2527, 2561
CspCI	CAANNNNNGTGG	2 cut(s)	1432, 1467
CviQI	GTAC	7 cut(s)	136, 226, 846, 1381, 1912, 2527, 2561
DraI	TTTAAA	2 cut(s)	405, 2197
EaeI	YGGCCR	4 cut(s)	1273, 1440, 1674, 2248
Eam1104I	CTCTTC	5 cut(s)	162, 1031, 1352, 1676, 1902
EarI	CTCTTC	5 cut(s)	162, 1031, 1352, 1676, 1902
EciI	GGCGGA	1 cut(s)	1814
Ecl136II	GAGCTC	1 cut(s)	1529
Eco130I	CCWWGG	5 cut(s)	354, 882, 1313, 1854, 2251
Eco24I	GRGCYC	1 cut(s)	1531
Eco32I	GATATC	1 cut(s)	501
Eco47I	GGWCC	1 cut(s)	2321
Eco47III	AGCGCT	1 cut(s)	2514
Eco53kI	GAGCTC	1 cut(s)	1529
Eco57I	CTGAAG	3 cut(s)	233, 785, 2507
Eco88I	CYCGRG	1 cut(s)	48
Eco91I	GGTNACC	2 cut(s)	2255, 2285
EcoICRI	GAGCTC	1 cut(s)	1529
EcoO65I	GGTNACC	2 cut(s)	2255, 2285
EcoRII	CCWGG	3 cut(s)	1057, 1117, 2323
EcoRV	GATATC	1 cut(s)	501
EcoT14I	CCWWGG	5 cut(s)	354, 882, 1313, 1854, 2251
EcoT38I	GRGCYC	1 cut(s)	1531
ErhI	CCWWGG	5 cut(s)	354, 882, 1313, 1854, 2251
FalI	AAGNNNNNCTT	6 cut(s)	165, 197, 1306, 1338, 1767, 1799
FaqI	GGGAC	1 cut(s)	953
FbaI	TGATCA	3 cut(s)	1045, 1654, 1711
FriOI	GRGCYC	1 cut(s)	1531
FspBI	CTAG	5 cut(s)	1299, 1469, 1668, 1862, 2208
GlaI	GCGC	3 cut(s)	342, 656, 2514
GsaI	CCCAGC	2 cut(s)	1194, 1508
GsuI	CTGGAG	3 cut(s)	242, 356, 2081
HaeII	RGCGCY	1 cut(s)	2516
HaeIII	GGCC	4 cut(s)	1275, 1442, 1676, 2250
HapII	CCGG	2 cut(s)	1927, 2382
HgaI	GACGC	2 cut(s)	293, 2455
HhaI	GCGC	3 cut(s)	343, 657, 2515
Hin6I	GCGC	3 cut(s)	341, 655, 2513
HinP1I	GCGC	3 cut(s)	341, 655, 2513
HincII	GTYRAC	1 cut(s)	2044
HindII	GTYRAC	1 cut(s)	2044
HindIII	AAGCTT	4 cut(s)	296, 399, 797, 1781
HinfI	GANTC	9 cut(s)	8, 569, 610, 1645, 1720, 1753, 2177, 2395, 2571
HpaII	CCGG	2 cut(s)	1927, 2382
HphI	GGTGA	5 cut(s)	1073, 1315, 2138, 2249, 2281
Hpy166II	GTNNAC	4 cut(s)	228, 1180, 1383, 2044
Hpy8I	GTNNAC	4 cut(s)	228, 1180, 1383, 2044
HpyAV	CCTTC	9 cut(s)	905, 943, 1021, 1579, 1726, 1968, 2097, 2164, 2270
HpyCH4III	ACNGT	3 cut(s)	1417, 2031, 2434
HpyCH4IV	ACGT	6 cut(s)	817, 907, 1182, 1283, 1964, 2086
HpyF10VI	GCNNNNNNNGC	7 cut(s)	205, 340, 661, 1394, 1526, 1673, 1867
HpySE526I	ACGT	6 cut(s)	817, 907, 1182, 1283, 1964, 2086
HspAI	GCGC	3 cut(s)	341, 655, 2513
Ksp22I	TGATCA	3 cut(s)	1045, 1654, 1711
LguI	GCTCTTC	1 cut(s)	1031
LmnI	GCTCC	4 cut(s)	652, 1315, 1858, 2485
LweI	GCATC	8 cut(s)	244, 517, 1485, 1507, 1942, 2000, 2110, 2497
MaeI	CTAG	5 cut(s)	1299, 1469, 1668, 1862, 2208
MaeII	ACGT	6 cut(s)	817, 907, 1182, 1283, 1964, 2086
MaeIII	GTNAC	8 cut(s)	725, 903, 1279, 1303, 1318, 1696, 2255, 2285
MhlI	GDGCHC	2 cut(s)	960, 1531
MlsI	TGGCCA	3 cut(s)	1442, 1676, 2250
MluNI	TGGCCA	3 cut(s)	1442, 1676, 2250
MlyI	GAGTC	3 cut(s)	1639, 1714, 2389
MmeI	TCCRAC	1 cut(s)	2521
Mox20I	TGGCCA	3 cut(s)	1442, 1676, 2250
MroXI	GAANNNNTTC	1 cut(s)	765
MscI	TGGCCA	3 cut(s)	1442, 1676, 2250
MslI	CAYNNNNRTG	2 cut(s)	50, 1461
Msp20I	TGGCCA	3 cut(s)	1442, 1676, 2250
MspCI	CTTAAG	2 cut(s)	29, 1556
MspI	CCGG	2 cut(s)	1927, 2382
MspR9I	CCNGG	5 cut(s)	1059, 1119, 1928, 2325, 2383
Mva1269I	GAATGC	1 cut(s)	1579
MvaI	CCWGG	3 cut(s)	1059, 1119, 2325
MvnI	CGCG	1 cut(s)	657
MwoI	GCNNNNNNNGC	7 cut(s)	205, 340, 661, 1394, 1526, 1673, 1867
NciI	CCSGG	2 cut(s)	1928, 2383
NcoI	CCATGG	2 cut(s)	882, 2251
NlaIV	GGNNCC	3 cut(s)	1253, 1311, 1347
NmuCI	GTSAC	4 cut(s)	725, 1303, 1696, 2255
NspI	RCATGY	1 cut(s)	1794
OliI	CACNNNNGTG	1 cut(s)	50
PaeR7I	CTCGAG	1 cut(s)	48
PagI	TCATGA	1 cut(s)	618
PaqCI	CACCTGC	1 cut(s)	2114
PciSI	GCTCTTC	1 cut(s)	1031
PctI	GAATGC	1 cut(s)	1579
PdmI	GAANNNNTTC	1 cut(s)	765
PfeI	GAWTC	6 cut(s)	8, 569, 610, 1753, 2177, 2571
PflFI	GACNNNGTC	1 cut(s)	2398
PfoI	TCCNGGA	1 cut(s)	1926
PleI	GAGTC	3 cut(s)	1639, 1714, 2389
PpsI	GAGTC	3 cut(s)	1639, 1714, 2389
Ppu21I	YACGTR	1 cut(s)	908
PsiI	TTATAA	1 cut(s)	927
Psp124BI	GAGCTC	1 cut(s)	1531
Psp6I	CCWGG	3 cut(s)	1057, 1117, 2323
PspEI	GGTNACC	2 cut(s)	2255, 2285
PspFI	CCCAGC	2 cut(s)	1190, 1504
PspGI	CCWGG	3 cut(s)	1057, 1117, 2323
PspN4I	GGNNCC	3 cut(s)	1253, 1311, 1347
PspPI	GGNCC	1 cut(s)	2321
PspXI	VCTCGAGB	1 cut(s)	48
PstI	CTGCAG	3 cut(s)	555, 1103, 1177
PstNI	CAGNNNCTG	1 cut(s)	1873
PsyI	GACNNNGTC	1 cut(s)	2398
RsaI	GTAC	7 cut(s)	137, 227, 847, 1382, 1913, 2528, 2562
RsaNI	GTAC	7 cut(s)	136, 226, 846, 1381, 1912, 2527, 2561
RseI	CAYNNNNRTG	2 cut(s)	50, 1461
SacI	GAGCTC	1 cut(s)	1531
SapI	GCTCTTC	1 cut(s)	1031
Sau96I	GGNCC	1 cut(s)	2321
ScaI	AGTACT	2 cut(s)	137, 1913
SchI	GAGTC	3 cut(s)	1639, 1714, 2389
ScrFI	CCNGG	5 cut(s)	1059, 1119, 1928, 2325, 2383
SduI	GDGCHC	2 cut(s)	960, 1531
SfaNI	GCATC	8 cut(s)	244, 517, 1485, 1507, 1942, 2000, 2110, 2497
SfcI	CTRYAG	4 cut(s)	488, 551, 1099, 1173
Sfr274I	CTCGAG	1 cut(s)	48
SinI	GGWCC	1 cut(s)	2321
SlaI	CTCGAG	1 cut(s)	48
SmiMI	CAYNNNNRTG	2 cut(s)	50, 1461
SmlI	CTYRAG	6 cut(s)	29, 48, 467, 584, 1556, 1744
SmoI	CTYRAG	6 cut(s)	29, 48, 467, 584, 1556, 1744
SsiI	CCGC	1 cut(s)	1799
SspMI	CTAG	5 cut(s)	1299, 1469, 1668, 1862, 2208
SstI	GAGCTC	1 cut(s)	1531
StyD4I	CCNGG	5 cut(s)	1057, 1117, 1926, 2323, 2381
StyI	CCWWGG	5 cut(s)	354, 882, 1313, 1854, 2251
TaaI	ACNGT	3 cut(s)	1417, 2031, 2434
TaiI	ACGT	6 cut(s)	820, 910, 1185, 1286, 1967, 2089
TaqI	TCGA	6 cut(s)	49, 289, 1426, 1804, 2218, 2496
TatI	WGTACW	5 cut(s)	135, 225, 1380, 1911, 2526
TfiI	GAWTC	6 cut(s)	8, 569, 610, 1753, 2177, 2571
TscAI	CASTG	5 cut(s)	103, 1182, 1269, 1390, 1705
TseFI	GTSAC	4 cut(s)	725, 1303, 1696, 2255
Tsp45I	GTSAC	4 cut(s)	725, 1303, 1696, 2255
TspRI	CASTG	5 cut(s)	103, 1182, 1269, 1390, 1705
Tth111I	GACNNNGTC	1 cut(s)	2398
Vha464I	CTTAAG	2 cut(s)	29, 1556
VpaK11BI	GGWCC	1 cut(s)	2321
XapI	RAATTY	6 cut(s)	561, 778, 1081, 1333, 1367, 2071
XbaI	TCTAGA	1 cut(s)	1468
XceI	RCATGY	1 cut(s)	1794
XhoI	CTCGAG	1 cut(s)	48
XmnI	GAANNNNTTC	1 cut(s)	765
XspI	CTAG	5 cut(s)	1299, 1469, 1668, 1862, 2208
ZrmI	AGTACT	2 cut(s)	137, 1913

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.