Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001925

Physical Location & Seq

Genomic Coordinates Reverse (-)

6541421 .. 6549468

Gene Structure 8048 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16667

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGCACATAAAGCAGATTATAATTGAAGGATTTAAGAGCTACAGAGAACAGGTTGCTACTGAGCCATTCAGTCCAAAAATCAATTGCGTTGTTGGTGCTAATGGGTCCGGAAAGACAAACTTTTTCCATGCAATTCGGTTTGTACTAAGTGACCTTTTCCAAAACCTTCGAAGCGACGATCGGCATGCTCTACTCCATGAAGGTGCAGGGCACCAAGTCTTATCTGCATTTGTGGAGATTGTCTTCGATAACTCTGACAATCGAATACCGGTTGATAAGGAGGAAGTGCGGTTGCGAAGGACAATTGGTTTGAAGAAGGATGAGTATTTCTTGGATGGAAAGCACATCACGAAAACTGAGGTTATGAATTTACTGGAAAGTGCTGGGTTCTCTCGCTCCAATCCATATTATGTTGTGCAGCAAGGAAAGATAGCATCCTTGACACTGATGAAAGATTCTGAGCGACTGGATTTACTTAAGGAAATCGGTGGCACTCGAGTGTATGAGGAGAGACGTCAAGAAAGTTTGAAAATCATGCAGGACACTGGTAACAAAAGAAAGCAGATAATTCAAGTTGTTCAGTACTTGGATGAGAGATTAAAGGAACTGGACGAAGAGAAAGAGGAACTCAGAAAGTATCAGCAGCTTGACAAGCAGCGAAAATCTCTGGAATACACTATATATGACAAGGAACTTCAGGATGCTCGCCAAAGGCTGGCAGAGGTAGAAGATGATCGGAATAAGGTTTCTGAAACATCGACGAGGATGTATAATAGTGTGCTGGATGCCCATGAAAAGTCCAAGGACTTGGATAAGGCTTTGAAAGATTTGACAAAAGAGCTACAAGCTTTAAATAAAGAGAAAGAAGCAGTGGAAAAACGAAGAACAGACGCGATAAAGAAACACACAGAGCTTGAGCTTGATGTCAAAGATCTACAGGAGAAGATATCTGGAAACATCCGAGCCAAAGAAGATGCTGTGAAACAACTACAGAGTCTGCAGAAAGAGATTCAGGATTCAATGGATGAGCTTGAGAATATAAGTCCTCTGTATGAGAATCAAGTCATGAGGGAAAAGGAGATAACAAAGGGAATAATGGAGCGTGAGAAGCAGCTTAGCATACTTTATCAAAAACAAGGTCGTGCGACCCAGTTTCCAAGTAAAGCTGCTCGTGACAAATGGCTTCAAAAGGAAATTGATGATCTTGAACGAGTTCTTTCGTCAAATTTGGCACAGGAGAACAAGCTTCAGGATGAAATTAAACGTCTTAATGCTGAATTGCACGAGCGGGGTACTTACATTGAATCTCGAAGAAATGAAATTACTAACAAGGAATCTCTCATCTCTCAGTCACGTGAAGGGTTCAGTCATCATAAAGCAGAGAGGGACAAGATGCAGGATGAGCGCAAGACCCTATGGAGGAAAGAAACAGAACTTTCTGCTGAAATTGATAAACTGAGAACAGAAGTTGAGAAGGCAGAGAAGAGCCTTGATCATTCAACTCCTGGTGATGTGAGGAGAGGGCTAAATTCTGTTCGTAAGATCTGCAGAGAGTATAATATTCCTGGGGTATTTGGTCCTATTATTGAGTTGCTTGATTGTGAGGAAAAGTTTTTTACAGCAGTGGAAGTTACTGCTGGGAACAGCTTATTTCATGTTGTGGTTGAAAATGATGAAATATCAACTCAGATAATCAGGCACCTTAATTCACTGAAAGGTGGGCGTGTTACTTTTATCCCCCTGAATAGGGTGAGGGCTCCAAGGGTAACTTATCCACAAAACTCAGACGTGGTTCCTTTGTTGAAGAGGTTAAAGTTTCTTCCAAAGTACACTGCTGCATTTGCTCAGGTATTTGCTAGAACAGTTGTTTGTCGAGATCTGGATGTGGCCACAAAGGTTGCTCGTAGCGATGGTCTAGATTGCATCACTTTAGAAGGAGATCAAGTCAGCAAGAAGGGTGGGATGACGGGAGGATTTTATGATCACAGACGCTCAAAGTTGAAGTTCATGAATCTAATCCGACAGAATACAAAATCTATCAGCTTGAAAGAAGAAGAACTTGAGAAAATCAGAAATATGCTTGAAAATATCCTCTTAAAAGTTCTGGACACCCCTACTTTTAACTCAGCTCTGAAAAGCCTTGCGAAGATTGGGTGTTGGGAGATGGTATTTTGTTTGCATTTTCTCATTCCTAGATTTTGGATGCCCAAACATTTCATTTGCTTCGTGCTCAGATTCCTCTGTACATGTAAAAATGTCTTGAGTACTGGTTTAAGAAAGGTGTTACTCCTCTGTAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000793 GO:0000819 GO:0003674 GO:0003682 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010468 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016363 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022402 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0036211 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051276 GO:0055044 GO:0060147 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098813 GO:0140096 GO:1900368 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 map04110 map04111 map04113 map04114

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

766

Amino Acids

88.84

Weight (kDa)

8.76

Isoelectric Point (pI)

46.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_15	PF13175	1 - 300	3e-12	AAA ATPase domain
SMC_N	PF02463	2 - 759	9e-37	RecF/RecN/SMC N terminal domain
AAA_23	PF13476	6 - 343	2.5e-10	AAA domain
AAA_21	PF13304	27 - 56	3.2e-06	AAA domain, putative AbiEii toxin, Type IV TA system
Myosin_tail_1	PF01576	271 - 495	8.3e-08	Myosin tail
SMC_hinge	PF06470	522 - 634	2.3e-28	SMC proteins Flexible Hinge Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27170 AT2G27170 AT2G27170 AT2G27170
fragaria_vesca	FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061
malus_domestica	MD03G1161700.v1.1 MD11G1177700.v1.1
prunus_persica	Prupe.6G149900_v2.0.a1 Prupe.6G149900_v2.0.a1
pyrus_communis	pycom03g11460 pycom03g11470 pycom03g11480 pycom11g15150 pycom11g15160 pycom11g15170
rosa_chinensis	RchiOBHm_Chr1g0362081 RchiOBHm_Chr7g0186721 RchiOBHm_Chr7g0186731
rosa_laevigata	RLG00000004823 RLG00000027673
rosa_multiflora	Rmu_co8477933.1_g000001 Rmu_sc0010614.1_g000002 Rmu_sc0017555.1_g000001 Rmu_sc0018615.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267880 Rroxscaffold_4G00294520
rosa_rugosa	Rorug01G0293400 Rorug01G0293500 Rorug06G0475900 Rorug06G0476000 Rorug06G0476100
rosa_samantha	Rh1AG303600 Rh1BG266900 Rh1CG285000 Rh1DG296900 Rh7AG064800 Rh7BG081000 Rh7CG082800 Rh7DG083900
rosa_wichuraiana	Rw1G027040 Rw7G007200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	20
AatII	GACGTC	1 cut(s)	517
AccB1I	GGYRCC	2 cut(s)	210, 1698
AccB7I	CCANNNNNTGG	1 cut(s)	715
AccBSI	CCGCTC	1 cut(s)	1288
AccII	CGCG	1 cut(s)	893
AccIII	TCCGGA	1 cut(s)	107
AciI	CCGC	2 cut(s)	289, 1288
AcoI	YGGCCR	1 cut(s)	1887
AcsI	RAATTY	3 cut(s)	367, 1225, 1528
AcuI	CTGAAG	2 cut(s)	680, 1232
AcvI	CACGTG	1 cut(s)	1355
AcyI	GRCGYC	1 cut(s)	514
AfaI	GTAC	6 cut(s)	144, 584, 1294, 1829, 2245, 2266
AfiI	CCNNNNNNNGG	4 cut(s)	715, 1419, 1746, 1747
AflII	CTTAAG	1 cut(s)	476
AflIII	ACRYGT	1 cut(s)	2246
AgeI	ACCGGT	1 cut(s)	268
AjiI	CACGTC	1 cut(s)	1789
AjnI	CCWGG	2 cut(s)	1504, 1564
AleI	CACNNNNGTG	1 cut(s)	497
Alw21I	GWGCWC	1 cut(s)	2232
Alw26I	GTCTC	1 cut(s)	505
AlwNI	CAGNNNCTG	1 cut(s)	997
Ama87I	CYCGRG	1 cut(s)	495
Aor13HI	TCCGGA	1 cut(s)	107
AoxI	GGCC	1 cut(s)	1887
ApeKI	GCWGC	6 cut(s)	418, 643, 655, 1111, 1166, 1835
ApoI	RAATTY	3 cut(s)	367, 1225, 1528
ArsI	GACNNNNNNTTYG	4 cut(s)	292, 324, 1123, 1155
AsiGI	ACCGGT	1 cut(s)	268
Asp700I	GAANNNNTTC	1 cut(s)	1212
AspLEI	GCGC	1 cut(s)	1407
AspS9I	GGNCC	2 cut(s)	105, 1577
AsuHPI	GGTGA	2 cut(s)	1520, 1762
AsuII	TTCGAA	1 cut(s)	169
AvaI	CYCGRG	1 cut(s)	495
AvaII	GGWCC	2 cut(s)	105, 1577
BaeGI	GKGCMC	1 cut(s)	213
BalI	TGGCCA	1 cut(s)	1889
BanI	GGYRCC	2 cut(s)	210, 1698
BanII	GRGCYC	1 cut(s)	1759
BauI	CACGAG	2 cut(s)	1170, 1283
BbrPI	CACGTG	1 cut(s)	1355
BbsI	GAAGAC	1 cut(s)	235
Bbv12I	GWGCWC	1 cut(s)	2232
BbvI	GCAGC	6 cut(s)	430, 655, 667, 1123, 1153, 1822
BccI	CCATC	3 cut(s)	329, 1904, 2158
BcgI	CGANNNNNNTGC	2 cut(s)	167, 201
BciT130I	CCWGG	2 cut(s)	1506, 1566
BclI	TGATCA	2 cut(s)	1492, 1981
BcoDI	GTCTC	1 cut(s)	505
BfaI	CTAG	3 cut(s)	1857, 1916, 2193
BfmI	CTRYAG	6 cut(s)	40, 935, 989, 998, 1546, 2293
BfrI	CTTAAG	1 cut(s)	476
BglII	AGATCT	3 cut(s)	931, 1542, 1876
BisI	GCNGC	6 cut(s)	419, 644, 656, 1112, 1167, 1836
BlpI	GCTNAGC	1 cut(s)	1115
BlsI	GCNGC	6 cut(s)	420, 645, 657, 1113, 1168, 1837
BmcAI	AGTACT	2 cut(s)	584, 2266
Bme1390I	CCNGG	2 cut(s)	1506, 1566
Bme18I	GGWCC	2 cut(s)	105, 1577
BmeT110I	CYCGRG	1 cut(s)	495
BmgBI	CACGTC	1 cut(s)	1789
BmgT120I	GGNCC	2 cut(s)	105, 1577
BmiI	GGNNCC	5 cut(s)	106, 212, 1700, 1758, 1794
BmrFI	CCNGG	2 cut(s)	1506, 1566
BmrI	ACTGGG	1 cut(s)	1144
BmsI	GCATC	7 cut(s)	443, 691, 775, 964, 1383, 1932, 2193
BmuI	ACTGGG	1 cut(s)	1144
BpiI	GAAGAC	1 cut(s)	235
Bpu10I	CCTNAGC	1 cut(s)	1845
Bpu1102I	GCTNAGC	1 cut(s)	1115
Bpu14I	TTCGAA	1 cut(s)	169
BpuEI	CTTGAG	4 cut(s)	935, 1052, 2081, 2281
BsaAI	YACGTR	1 cut(s)	1355
BsaHI	GRCGYC	1 cut(s)	514
BsaJI	CCNNGG	3 cut(s)	801, 1565, 1760
BsaWI	WCCGGW	2 cut(s)	107, 268
BsaXI	ACNNNNNCTCC	2 cut(s)	1929, 1959
Bsc4I	CCNNNNNNNGG	4 cut(s)	715, 1419, 1746, 1747
Bse118I	RCCGGY	1 cut(s)	268
Bse1I	ACTGG	6 cut(s)	378, 471, 550, 612, 1150, 2272
BseAI	TCCGGA	1 cut(s)	107
BseBI	CCWGG	2 cut(s)	1506, 1566
BseDI	CCNNGG	3 cut(s)	801, 1565, 1760
BseLI	CCNNNNNNNGG	4 cut(s)	715, 1419, 1746, 1747
BseNI	ACTGG	6 cut(s)	378, 471, 550, 612, 1150, 2272
BseRI	GAGGAG	3 cut(s)	521, 1531, 2279
BseSI	GKGCMC	1 cut(s)	213
BseXI	GCAGC	6 cut(s)	430, 655, 667, 1123, 1153, 1822
BseYI	CCCAGC	2 cut(s)	383, 1637
BsgI	GTGCAG	2 cut(s)	225, 437
Bsh1236I	CGCG	1 cut(s)	893
Bsh1285I	CGRYCG	1 cut(s)	181
BshFI	GGCC	1 cut(s)	1889
BshNI	GGYRCC	2 cut(s)	210, 1698
BshTI	ACCGGT	1 cut(s)	268
BsiEI	CGRYCG	1 cut(s)	181
BsiHKAI	GWGCWC	1 cut(s)	2232
BsiHKCI	CYCGRG	1 cut(s)	495
BsiSI	CCGG	2 cut(s)	108, 269
BslFI	GGGAC	1 cut(s)	1400
BslI	CCNNNNNNNGG	4 cut(s)	715, 1419, 1746, 1747
BsmAI	GTCTC	1 cut(s)	505
BsmBI	CGTCTC	1 cut(s)	505
BsmFI	GGGAC	1 cut(s)	1400
BsnI	GGCC	1 cut(s)	1889
BsoBI	CYCGRG	1 cut(s)	495
Bsp119I	TTCGAA	1 cut(s)	169
Bsp1286I	GDGCHC	3 cut(s)	213, 1759, 2232
Bsp13I	TCCGGA	1 cut(s)	107
Bsp1407I	TGTACA	1 cut(s)	2243
Bsp143I	GATC	9 cut(s)	178, 733, 931, 1201, 1492, 1542, 1876, 1939, 1981
Bsp1720I	GCTNAGC	1 cut(s)	1115
BspACI	CCGC	2 cut(s)	289, 1288
BspANI	GGCC	1 cut(s)	1889
BspEI	TCCGGA	1 cut(s)	107
BspFNI	CGCG	1 cut(s)	893
BspHI	TCATGA	2 cut(s)	1065, 2007
BspLI	GGNNCC	5 cut(s)	106, 212, 1700, 1758, 1794
BspMAI	CTGCAG	2 cut(s)	1002, 1550
BspQI	GCTCTTC	1 cut(s)	1478
BspT104I	TTCGAA	1 cut(s)	169
BspT107I	GGYRCC	2 cut(s)	210, 1698
BspTI	CTTAAG	1 cut(s)	476
BsrBI	CCGCTC	1 cut(s)	1288
BsrFI	RCCGGY	1 cut(s)	268
BsrGI	TGTACA	1 cut(s)	2243
BsrI	ACTGG	6 cut(s)	378, 471, 550, 612, 1150, 2272
BssAI	RCCGGY	1 cut(s)	268
BssECI	CCNNGG	3 cut(s)	801, 1565, 1760
BssMI	GATC	9 cut(s)	178, 733, 931, 1201, 1492, 1542, 1876, 1939, 1981
BssNI	GRCGYC	1 cut(s)	514
BssSI	CACGAG	2 cut(s)	1170, 1283
BssT1I	CCWWGG	2 cut(s)	801, 1760
Bst2BI	CACGAG	2 cut(s)	1170, 1283
Bst2UI	CCWGG	2 cut(s)	1506, 1566
Bst4CI	ACNGT	1 cut(s)	1864
Bst6I	CTCTTC	3 cut(s)	609, 1478, 1799
BstACI	GRCGYC	1 cut(s)	514
BstAFI	CTTAAG	1 cut(s)	476
BstAUI	TGTACA	1 cut(s)	2243
BstBAI	YACGTR	1 cut(s)	1355
BstBI	TTCGAA	1 cut(s)	169
BstC8I	GCNNGC	3 cut(s)	186, 706, 717
BstFNI	CGCG	1 cut(s)	893
BstHHI	GCGC	1 cut(s)	1407
BstKTI	GATC	9 cut(s)	181, 736, 934, 1204, 1495, 1545, 1879, 1942, 1984
BstMAI	GTCTC	1 cut(s)	505
BstMBI	GATC	9 cut(s)	178, 733, 931, 1201, 1492, 1542, 1876, 1939, 1981
BstMCI	CGRYCG	1 cut(s)	181
BstMWI	GCNNNNNNNGC	5 cut(s)	10, 652, 1108, 1402, 1841
BstNI	CCWGG	2 cut(s)	1506, 1566
BstNSI	RCATGY	2 cut(s)	188, 2250
BstSCI	CCNGG	2 cut(s)	1504, 1564
BstSFI	CTRYAG	6 cut(s)	40, 935, 989, 998, 1546, 2293
BstSLI	GKGCMC	1 cut(s)	213
BstUI	CGCG	1 cut(s)	893
BstV1I	GCAGC	6 cut(s)	430, 655, 667, 1123, 1153, 1822
BstV2I	GAAGAC	1 cut(s)	235
BstX2I	RGATCY	3 cut(s)	931, 1542, 1876
BstXI	CCANNNNNNTGG	1 cut(s)	808
BstYI	RGATCY	3 cut(s)	931, 1542, 1876
BsuRI	GGCC	1 cut(s)	1889
BtgZI	GCGATG	1 cut(s)	1923
BtrI	CACGTC	1 cut(s)	1789
BtsI	GCAGTG	3 cut(s)	876, 1629, 1830
BtsIMutI	CAGTG	6 cut(s)	443, 543, 876, 1629, 1709, 1830
Cac8I	GCNNGC	3 cut(s)	186, 706, 717
CaiI	CAGNNNCTG	1 cut(s)	997
CciI	TCATGA	2 cut(s)	1065, 2007
CfoI	GCGC	1 cut(s)	1407
Cfr10I	RCCGGY	1 cut(s)	268
Cfr13I	GGNCC	2 cut(s)	105, 1577
CseI	GACGC	2 cut(s)	899, 1998
Csp6I	GTAC	6 cut(s)	143, 583, 1293, 1828, 2244, 2265
CspAI	ACCGGT	1 cut(s)	268
CspCI	CAANNNNNGTGG	4 cut(s)	1879, 1914, 1939, 1974
CviAII	CATG	9 cut(s)	128, 185, 197, 535, 791, 1066, 1655, 2008, 2247
CviQI	GTAC	6 cut(s)	143, 583, 1293, 1828, 2244, 2265
DpnI	GATC	9 cut(s)	180, 735, 933, 1203, 1494, 1544, 1878, 1941, 1983
DpnII	GATC	9 cut(s)	178, 733, 931, 1201, 1492, 1542, 1876, 1939, 1981
DraI	TTTAAA	1 cut(s)	852
EaeI	YGGCCR	1 cut(s)	1887
Eam1104I	CTCTTC	3 cut(s)	609, 1478, 1799
EarI	CTCTTC	3 cut(s)	609, 1478, 1799
Eco130I	CCWWGG	2 cut(s)	801, 1760
Eco24I	GRGCYC	1 cut(s)	1759
Eco32I	GATATC	1 cut(s)	948
Eco47I	GGWCC	2 cut(s)	105, 1577
Eco57I	CTGAAG	2 cut(s)	680, 1232
Eco72I	CACGTG	1 cut(s)	1355
Eco88I	CYCGRG	1 cut(s)	495
EcoRII	CCWGG	2 cut(s)	1504, 1564
EcoRV	GATATC	1 cut(s)	948
EcoT14I	CCWWGG	2 cut(s)	801, 1760
EcoT38I	GRGCYC	1 cut(s)	1759
ErhI	CCWWGG	2 cut(s)	801, 1760
Esp3I	CGTCTC	1 cut(s)	505
FaeI	CATG	9 cut(s)	131, 188, 200, 538, 794, 1069, 1658, 2011, 2250
FalI	AAGNNNNNCTT	6 cut(s)	104, 136, 1753, 1785, 2043, 2075
FaqI	GGGAC	1 cut(s)	1400
FatI	CATG	9 cut(s)	127, 184, 196, 534, 790, 1065, 1654, 2007, 2246
FauI	CCCGC	1 cut(s)	1281
FbaI	TGATCA	2 cut(s)	1492, 1981
Fnu4HI	GCNGC	6 cut(s)	419, 644, 656, 1112, 1167, 1836
FriOI	GRGCYC	1 cut(s)	1759
Fsp4HI	GCNGC	6 cut(s)	419, 644, 656, 1112, 1167, 1836
FspBI	CTAG	3 cut(s)	1857, 1916, 2193
GlaI	GCGC	1 cut(s)	1406
GluI	GCNGC	6 cut(s)	419, 644, 656, 1112, 1167, 1836
GsaI	CCCAGC	2 cut(s)	387, 1641
HaeIII	GGCC	1 cut(s)	1889
HapII	CCGG	2 cut(s)	108, 269
HgaI	GACGC	2 cut(s)	899, 1998
HhaI	GCGC	1 cut(s)	1407
Hin1I	GRCGYC	1 cut(s)	514
Hin1II	CATG	9 cut(s)	131, 188, 200, 538, 794, 1069, 1658, 2011, 2250
Hin6I	GCGC	1 cut(s)	1405
HinP1I	GCGC	1 cut(s)	1405
HindIII	AAGCTT	2 cut(s)	846, 1244
HinfI	GANTC	9 cut(s)	455, 994, 1009, 1016, 1057, 1304, 1334, 2011, 2235
HpaII	CCGG	2 cut(s)	108, 269
HphI	GGTGA	2 cut(s)	1520, 1762
Hpy166II	GTNNAC	1 cut(s)	1830
Hpy8I	GTNNAC	1 cut(s)	1830
Hpy99I	CGWCG	2 cut(s)	179, 763
HpyAV	CCTTC	9 cut(s)	20, 176, 194, 291, 310, 1352, 1468, 1928, 1948
HpyCH4III	ACNGT	1 cut(s)	1864
HpyCH4IV	ACGT	4 cut(s)	514, 1264, 1354, 1788
HpyF10VI	GCNNNNNNNGC	5 cut(s)	10, 652, 1108, 1402, 1841
HpySE526I	ACGT	4 cut(s)	514, 1264, 1354, 1788
Hsp92I	GRCGYC	1 cut(s)	514
Hsp92II	CATG	9 cut(s)	131, 188, 200, 538, 794, 1069, 1658, 2011, 2250
HspAI	GCGC	1 cut(s)	1405
Kpn2I	TCCGGA	1 cut(s)	107
Ksp22I	TGATCA	2 cut(s)	1492, 1981
Kzo9I	GATC	9 cut(s)	178, 733, 931, 1201, 1492, 1542, 1876, 1939, 1981
LguI	GCTCTTC	1 cut(s)	1478
LmnI	GCTCC	3 cut(s)	401, 1099, 1762
Lsp1109I	GCAGC	6 cut(s)	430, 655, 667, 1123, 1153, 1822
LweI	GCATC	7 cut(s)	443, 691, 775, 964, 1383, 1932, 2193
MaeI	CTAG	3 cut(s)	1857, 1916, 2193
MaeII	ACGT	4 cut(s)	514, 1264, 1354, 1788
MaeIII	GTNAC	8 cut(s)	149, 548, 1172, 1350, 1630, 1726, 1765, 2283
MalI	GATC	9 cut(s)	180, 735, 933, 1203, 1494, 1544, 1878, 1941, 1983
MbiI	CCGCTC	1 cut(s)	1288
MboI	GATC	9 cut(s)	178, 733, 931, 1201, 1492, 1542, 1876, 1939, 1981
MfeI	CAATTG	2 cut(s)	82, 303
MflI	RGATCY	3 cut(s)	931, 1542, 1876
MhlI	GDGCHC	3 cut(s)	213, 1759, 2232
MlsI	TGGCCA	1 cut(s)	1889
MluNI	TGGCCA	1 cut(s)	1889
MlyI	GAGTC	1 cut(s)	1003
MmeI	TCCRAC	1 cut(s)	2044
Mox20I	TGGCCA	1 cut(s)	1889
MroI	TCCGGA	1 cut(s)	107
MroXI	GAANNNNTTC	1 cut(s)	1212
MscI	TGGCCA	1 cut(s)	1889
MslI	CAYNNNNRTG	2 cut(s)	201, 497
Msp20I	TGGCCA	1 cut(s)	1889
MspCI	CTTAAG	1 cut(s)	476
MspI	CCGG	2 cut(s)	108, 269
MspR9I	CCNGG	2 cut(s)	1506, 1566
MunI	CAATTG	2 cut(s)	82, 303
MvaI	CCWGG	2 cut(s)	1506, 1566
MvnI	CGCG	1 cut(s)	893
MwoI	GCNNNNNNNGC	5 cut(s)	10, 652, 1108, 1402, 1841
NdeII	GATC	9 cut(s)	178, 733, 931, 1201, 1492, 1542, 1876, 1939, 1981
NlaIII	CATG	9 cut(s)	131, 188, 200, 538, 794, 1069, 1658, 2011, 2250
NlaIV	GGNNCC	5 cut(s)	106, 212, 1700, 1758, 1794
NmuCI	GTSAC	3 cut(s)	149, 1172, 1350
NspI	RCATGY	2 cut(s)	188, 2250
NspV	TTCGAA	1 cut(s)	169
OliI	CACNNNNGTG	1 cut(s)	497
PaeI	GCATGC	1 cut(s)	188
PaeR7I	CTCGAG	1 cut(s)	495
PagI	TCATGA	2 cut(s)	1065, 2007
PciI	ACATGT	1 cut(s)	2246
PciSI	GCTCTTC	1 cut(s)	1478
PdmI	GAANNNNTTC	1 cut(s)	1212
PfeI	GAWTC	8 cut(s)	455, 1009, 1016, 1057, 1304, 1334, 2011, 2235
PflMI	CCANNNNNTGG	1 cut(s)	715
PinAI	ACCGGT	1 cut(s)	268
PkrI	GCNGC	6 cut(s)	420, 645, 657, 1113, 1168, 1837
Ple19I	CGATCG	1 cut(s)	181
PleI	GAGTC	1 cut(s)	1002
PmaCI	CACGTG	1 cut(s)	1355
PmlI	CACGTG	1 cut(s)	1355
PpsI	GAGTC	1 cut(s)	1002
Ppu21I	YACGTR	1 cut(s)	1355
PscI	ACATGT	1 cut(s)	2246
PsiI	TTATAA	1 cut(s)	20
Psp6I	CCWGG	2 cut(s)	1504, 1564
PspCI	CACGTG	1 cut(s)	1355
PspFI	CCCAGC	2 cut(s)	383, 1637
PspGI	CCWGG	2 cut(s)	1504, 1564
PspN4I	GGNNCC	5 cut(s)	106, 212, 1700, 1758, 1794
PspPI	GGNCC	2 cut(s)	105, 1577
PspXI	VCTCGAGB	1 cut(s)	495
PstI	CTGCAG	2 cut(s)	1002, 1550
PstNI	CAGNNNCTG	1 cut(s)	997
PsuI	RGATCY	3 cut(s)	931, 1542, 1876
PvuI	CGATCG	1 cut(s)	181
RsaI	GTAC	6 cut(s)	144, 584, 1294, 1829, 2245, 2266
RsaNI	GTAC	6 cut(s)	143, 583, 1293, 1828, 2244, 2265
RseI	CAYNNNNRTG	2 cut(s)	201, 497
SapI	GCTCTTC	1 cut(s)	1478
SatI	GCNGC	6 cut(s)	419, 644, 656, 1112, 1167, 1836
Sau3AI	GATC	9 cut(s)	178, 733, 931, 1201, 1492, 1542, 1876, 1939, 1981
Sau96I	GGNCC	2 cut(s)	105, 1577
ScaI	AGTACT	2 cut(s)	584, 2266
SchI	GAGTC	1 cut(s)	1003
ScrFI	CCNGG	2 cut(s)	1506, 1566
SduI	GDGCHC	3 cut(s)	213, 1759, 2232
SfaNI	GCATC	7 cut(s)	443, 691, 775, 964, 1383, 1932, 2193
SfcI	CTRYAG	6 cut(s)	40, 935, 989, 998, 1546, 2293
Sfr274I	CTCGAG	1 cut(s)	495
SfuI	TTCGAA	1 cut(s)	169
SinI	GGWCC	2 cut(s)	105, 1577
SlaI	CTCGAG	1 cut(s)	495
SmiMI	CAYNNNNRTG	2 cut(s)	201, 497
SmlI	CTYRAG	6 cut(s)	476, 495, 914, 1031, 2060, 2260
SmoI	CTYRAG	6 cut(s)	476, 495, 914, 1031, 2060, 2260
SphI	GCATGC	1 cut(s)	188
SsiI	CCGC	2 cut(s)	289, 1288
SspI	AATATT	1 cut(s)	1561
SspMI	CTAG	3 cut(s)	1857, 1916, 2193
StyD4I	CCNGG	2 cut(s)	1504, 1564
StyI	CCWWGG	2 cut(s)	801, 1760
TaaI	ACNGT	1 cut(s)	1864
TaiI	ACGT	4 cut(s)	517, 1267, 1357, 1791
TaqI	TCGA	7 cut(s)	169, 246, 262, 496, 758, 1309, 1873
TatI	WGTACW	5 cut(s)	142, 582, 1827, 2243, 2264
TfiI	GAWTC	8 cut(s)	455, 1009, 1016, 1057, 1304, 1334, 2011, 2235
TscAI	CASTG	6 cut(s)	450, 550, 876, 1629, 1716, 1837
TseFI	GTSAC	3 cut(s)	149, 1172, 1350
TseI	GCWGC	6 cut(s)	418, 643, 655, 1111, 1166, 1835
Tsp45I	GTSAC	3 cut(s)	149, 1172, 1350
TspRI	CASTG	6 cut(s)	450, 550, 876, 1629, 1716, 1837
Van91I	CCANNNNNTGG	1 cut(s)	715
Vha464I	CTTAAG	1 cut(s)	476
VpaK11BI	GGWCC	2 cut(s)	105, 1577
XapI	RAATTY	3 cut(s)	367, 1225, 1528
XbaI	TCTAGA	1 cut(s)	1915
XceI	RCATGY	2 cut(s)	188, 2250
XhoI	CTCGAG	1 cut(s)	495
XmnI	GAANNNNTTC	1 cut(s)	1212
XspI	CTAG	3 cut(s)	1857, 1916, 2193
ZraI	GACGTC	1 cut(s)	515
ZrmI	AGTACT	2 cut(s)	584, 2266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.