Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001925

Physical Location & Seq

Genomic Coordinates Forward (+)

12884297 .. 12901636

Gene Structure 17340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G149900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3651 bp

ATGTATATAAAGCAGGTTATAATTGAAGGATTTAAGAGCTACAGAGAACAAGTTGCTACTGAGGCCTTCAGCCCAAAAGTTAATTGTGTTGTTGGTGCCAATGGGTCGGGAAAGACGAATTTCTTCCATGCAATTCGGTTTGTACTAAGTGACCTTTTCCAAAACCTTCGGAGCGAGGATAGGCATGCTCTACTCCATGAGGGGGCAGGTCACCAAGTATTATCTGCGTTTGTGGAGATTGTCTTTGATAATGCTGACAATCGAATCCCGGTTGATAAGGAGGAAGTGCGTTTGCGAAGAACCATTGGTTTGAAGAAGGATGAGTATTTCTTGGATGGAAAACACATCACGAAAACCGAGGTCATGAATTTGCTGGAAAGTGCTGGGTTCTCTCGCTCCAATCCTTATTATGTTGTGCAGCAAGGAAAGATAGCATCATTGACACTGATGAAAGACTCTGAACGGCTGGATTTACTGAAGGAAATTGGTGGCACTCGGGTGTATGAGGAGAGACGTCGAGAAAGTTTGAAAATTATGCAGGAAACTGGAAACAAAAGAAGGCAGATAATTCAAGTTGTTCAGTACTTGGACGAGAGATTAAAGGAATTGGATGAAGAGAAAGAGGAACTGAGAAAGTATCAGCAACTTGACAAGCAGCGAAAATCTTTGGAATACACTATTTATGACAAGGAACTTCAGGATGCTCGCCAAAAACTGGCAGAGGTAGAAGATGCTCGAAACAAGGTTTCTGAAACGTCAACGAAGATGTATAATAGCGTGCTGGATGCCCATGAAAAGTCCAAGGACTTGGACAAGATTATGAAGGATCTGACTAAAGAGCTTCAAGCTTTATCTAAAGAGAAAGAAGCAATAGAAAAACAAAGAACAGAAGCAATAAAGAAGCATACAGAGCTTGAGCTTGATGTGAAAGATTTGCAGGAGAAGATATCTGGAAACTTTGGAGCCAAAGGAGATGCTGTGAGACAGTTGCAGACTCTGCAGAAAGAAATTCAGGATTCAATGGATGAACTTGAGAAAATGAATCCTCTGTATGAGGATCAAGTCATGAAGGAAAAGGAGATCACAAAAGGAATAATGGAACGTGAGAAGCAGCTTAGCATACTTTATCAAAAACAAGGTCGTGCCACCCAGTTTTCAAGTAAAGCCGCTCGTGACAAATGGCTCCAAAAGGAAATTGATGATCTCGAGCGAGTTCTTTCTTCAAATTTGGCACAGGAGCAAAAACTTCAGGATGAAATTAAACGGCTTAATACTGAGTTGAGCGAGCGGGATGCCTACATTGAGTCTCGAAGAAGAGAGATTGCTACTATTGAATCTCTCATCTCTCAGTCACATGCAGGGTTCAATCATCATAAGTCACAGAGGGACAAGTTGCAGGATGAGCGCAAGTCCCTGTGGAGGAAGGAAACTGAACTTTCTGCTGAAATTGAGAAGCTGAGAACAGAAGTTGAGAAGGCTGAAAAGAGCCTGGATCATGCGACTCCTGGTGATGTCAGGAGAGGGCTAAATTCTGTTCGTAAGATTTGCAGAGAGTATAAAATTCCTGGGGTATTTGGCCCAATTATTGAGTTGCTTGATTGCGATGAAAAGTTTTTTACTGCTGTTGAAGTAACTGCTGGGAACAGCTTGTTTCACGTTGTGGTTGAAAATGATGAAATATCAACACAGATAATTAGGCACCTTAATTCATTGAAGGGTGGACGAGTTACGTTTATCCCCTTAAATAGGGTGAAGGCTCCACGGGTAATTTATCCACAGAATTCAGATGTGGTTCCTCTGTTAAAGAAGTTAAAGTTTGCTCCAAACTATAACCCAGCATTTGCCCAGGTATTTGCAAGAACAGTTGTTTGTCGAGACCTGGATGTGGCTACAAAGGTTGCTCGTACTGATGGTCTAGACTGCATTACTTTGGAAGGTGATCAGGTCAGCAAGAAGGGTGGTATGACAGGAGGGTTTTATGACCATAGACGTTCAAAATTGAAGTTTATGTGTACAATCATACAGAACACAAAATCTGTCAACATGAAGGAAGAAGAACTGGAGAAAATTAGATTTATGCTTCAAGATATCCTTTTGAAAAATGATTTAATATTATGCAAAGCAATAGACCAGAAAATTACAGATCTCGTAACTGAACAGCAGAAAATTGATGCTAAGCGGGCCCACGACAAATCAGAACTAGAACAGCTTAAGCAGGACATTGCCAATGCTGATAAGCAGAAAATTTTGATTTCTAAAGCTCTTGGGAATAAGGAAAAATCACTTGCTGATGTGCGGAGTCAAATTGATCAGCTTAGAGCCAGTATGGCCATGAAGAGGGCTGAAATGGGCACAGATCTCATTGATCATTTAACTCCAGTGGAGAAGGATCTTCTCTCAAGATTAAACCCTGAAATAGCAGATCTTAAAGAGAAGCTTATTTTATGCAAGACAGATCGTATTGAGACTGAGTCAAGAAAGGCAGAGCTCGAGACTAATTTAACCACAAACCTTAAGAGGCGTAAGCAAGAACTAGAGGCCATAATCTCTACCATGGAGACTGACAATTTGCATGGTGAAGCTGAAATTAAGAGTCAGGAACTGAATGATGCTAGATTGTTGGTTGAAGATTTAACAGAGCAGCTCAGAAGAGTTTCCGAAAGCATAGATGGCCAGTCAAAGCAACTCAGGAGAATCAAAGATGAAAAGACTAAGTTAAAGAATTTGGAAGACAACTATGAGAGGACTCTTCAGGATGAAGCCAAAGAGCTAGAGCAACTTTTGAGTAAAAGAAATATGTTTCTTGCTAAACAAGAAGAATACTCGAAGAAAATCAGGGAATTGGGCCCATTGTCTTCAGATGCTTTTGAAACGTATAAGCGAAGGAGTATCAAAGAATTGCATAAAATGCTGCACAGATGCAATGAGCAGCTGCAACAATTTAGTCATGTCAACAAGAAAGCACTTGATCAATATGTAAATTTTACAGAACAACGAGAAGAACTCCAGAAAAGGCAAGCCGAGCTGGATGCAGGTGATGAGAAAATTGGAGAACTTATACAGGTTTTGGATCAAAGGAAGGATGAATCAATAGAACGTACTTTTAAAGGTGTTGCTAGGCACTTTCGAGAAGTTTTCTCAGAACTTGTGCAAGGTGGCCATGGTTACCTTGTTATGATGAAGAAAAAGGATGGTCACCAAGGTGATGATGATCAGGATGAGGATGGACCACGTGAAGCGGATTTAGAGGGAAGAGTCGAGAAATATATTGGTGTAAAAGTGAAGGTTTCTTTTACCGGACAAGGGGAAACTCAGTCGATGAAGCAGTTGTCCGGGGGTCAGAAAACTGTTGTTGCGCTAACGCTTATCTTTGCCATCCAGCGATGTGATCCTGCTCCCTTTTATCTTTTCGATGAAATAGATGCAGCACTGGATCCTCAATACCGAACAGCTGTTGGAAATATGATCCGGCGCCTGGCAGACATGGCAAATACTCAATTTATAACCACAACATTCCGGCCAGAGCTTGTGAAAGTTTCTGACAAAATATATGGTGTTGAACATAAAAACAGGGTGAGCCGTGTCAACGTTGTCTTGAAGGAAGATGCATTGGACTTCATCGAGCATGACCAGTCTCACAATGCAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000793 GO:0000819 GO:0003674 GO:0003682 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010468 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016363 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022402 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0036211 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051276 GO:0055044 GO:0060147 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098813 GO:0140096 GO:1900368 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 map04110 map04111 map04113 map04114

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

1217

Amino Acids

140.43

Weight (kDa)

6.51

Isoelectric Point (pI)

46.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27170 AT2G27170 AT2G27170 AT2G27170
fragaria_vesca	FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061
malus_domestica	MD03G1161700.v1.1 MD11G1177700.v1.1
prunus_persica	Prupe.6G149900_v2.0.a1 Prupe.6G149900_v2.0.a1
pyrus_communis	pycom03g11460 pycom03g11470 pycom03g11480 pycom11g15150 pycom11g15160 pycom11g15170
rosa_chinensis	RchiOBHm_Chr1g0362081 RchiOBHm_Chr7g0186721 RchiOBHm_Chr7g0186731
rosa_laevigata	RLG00000004823 RLG00000027673
rosa_multiflora	Rmu_co8477933.1_g000001 Rmu_sc0010614.1_g000002 Rmu_sc0017555.1_g000001 Rmu_sc0018615.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267880 Rroxscaffold_4G00294520
rosa_rugosa	Rorug01G0293400 Rorug01G0293500 Rorug06G0475900 Rorug06G0476000 Rorug06G0476100
rosa_samantha	Rh1AG303600 Rh1BG266900 Rh1CG285000 Rh1DG296900 Rh7AG064800 Rh7BG081000 Rh7CG082800 Rh7DG083900
rosa_wichuraiana	Rw1G027040 Rw7G007200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	20, 3503
AarI	CACCTGC	1 cut(s)	3023
AatII	GACGTC	1 cut(s)	517
Acc36I	ACCTGC	3 cut(s)	4, 197, 3023
AccB1I	GGYRCC	3 cut(s)	95, 1698, 3471
AccB7I	CCANNNNNTGG	1 cut(s)	715
AccBSI	CCGCTC	2 cut(s)	1169, 1288
AciI	CCGC	5 cut(s)	1167, 1288, 2179, 2296, 3239
AclI	AACGTT	1 cut(s)	3588
AclWI	GGATC	9 cut(s)	834, 1065, 1500, 2397, 3078, 3383, 3428, 3441, 3460
AcoI	YGGCCR	4 cut(s)	2328, 2671, 3157, 3518
AcuI	CTGAAG	6 cut(s)	52, 497, 680, 1232, 2735, 2841
AcvI	CACGTG	1 cut(s)	3233
AcyI	GRCGYC	2 cut(s)	514, 3472
AdeI	CACNNNGTG	1 cut(s)	1660
AfaI	GTAC	5 cut(s)	144, 584, 1906, 2014, 3100
AfiI	CCNNNNNNNGG	8 cut(s)	202, 715, 1419, 1746, 1885, 2337, 3303, 3475
AflII	CTTAAG	2 cut(s)	2210, 2513
AjnI	CCWGG	6 cut(s)	1488, 1504, 1564, 1845, 1878, 3474
AleI	CACNNNNGTG	2 cut(s)	497, 3201
Alw21I	GWGCWC	1 cut(s)	2490
Alw26I	GTCTC	8 cut(s)	505, 976, 1311, 1869, 2459, 2486, 2552, 3639
AlwI	GGATC	9 cut(s)	834, 1065, 1500, 2397, 3078, 3383, 3428, 3441, 3460
AlwNI	CAGNNNCTG	2 cut(s)	997, 2602
Ama87I	CYCGRG	3 cut(s)	495, 1205, 2489
AoxI	GGCC	9 cut(s)	63, 1576, 2181, 2328, 2538, 2671, 2845, 3157, 3518
ApaI	GGGCCC	2 cut(s)	2185, 2849
ApeKI	GCWGC	8 cut(s)	418, 655, 1111, 2641, 2911, 2929, 2932, 3425
ArsI	GACNNNNNNTTYG	4 cut(s)	1123, 1155, 2551, 2583
Asp700I	GAANNNNTTC	2 cut(s)	122, 2653
AspLEI	GCGC	3 cut(s)	1407, 3358, 3474
AspS9I	GGNCC	6 cut(s)	1577, 2181, 2182, 2845, 2846, 3227
AsuC2I	CCSGG	2 cut(s)	269, 3334
AsuHPI	GGTGA	9 cut(s)	203, 1520, 1762, 1949, 2588, 3047, 3188, 3215, 3586
AvaI	CYCGRG	3 cut(s)	495, 1205, 2489
AvaII	GGWCC	1 cut(s)	3227
BaeGI	GKGCMC	3 cut(s)	2185, 2354, 2849
BalI	TGGCCA	3 cut(s)	2330, 2673, 3159
BamHI	GGATCC	1 cut(s)	3433
BanI	GGYRCC	3 cut(s)	95, 1698, 3471
BanII	GRGCYC	3 cut(s)	2185, 2490, 2849
BauI	CACGAG	1 cut(s)	1170
BbrPI	CACGTG	1 cut(s)	3233
BbsI	GAAGAC	2 cut(s)	2736, 2847
Bbv12I	GWGCWC	1 cut(s)	2490
BbvI	GCAGC	8 cut(s)	430, 667, 1123, 2653, 2898, 2919, 2941, 3437
BccI	CCATC	6 cut(s)	329, 1904, 2663, 3185, 3218, 3383
BceAI	ACGGC	3 cut(s)	479, 1280, 3564
BcgI	CGANNNNNNTGC	4 cut(s)	1274, 1308, 3011, 3045
BciT130I	CCWGG	6 cut(s)	1490, 1506, 1566, 1847, 1880, 3476
BclI	TGATCA	5 cut(s)	1939, 2308, 2365, 2968, 3211
BcnI	CCSGG	2 cut(s)	269, 3334
BcoDI	GTCTC	8 cut(s)	505, 976, 1311, 1869, 2459, 2486, 2552, 3639
BfaI	CTAG	6 cut(s)	1916, 2201, 2534, 2613, 2771, 3117
BfmI	CTRYAG	2 cut(s)	40, 998
BfoI	RGCGCY	1 cut(s)	3475
BfrI	CTTAAG	2 cut(s)	2210, 2513
BfuAI	ACCTGC	3 cut(s)	4, 197, 3023
BglI	GCCNNNNNGGC	1 cut(s)	2327
BglII	AGATCT	3 cut(s)	2143, 2356, 2422
BisI	GCNGC	9 cut(s)	419, 656, 1112, 1167, 2642, 2912, 2930, 2933, 3426
BlpI	GCTNAGC	2 cut(s)	1115, 2175
BlsI	GCNGC	9 cut(s)	420, 657, 1113, 1168, 2643, 2913, 2931, 2934, 3427
BmcAI	AGTACT	1 cut(s)	584
Bme1390I	CCNGG	8 cut(s)	269, 1490, 1506, 1566, 1847, 1880, 3334, 3476
Bme18I	GGWCC	1 cut(s)	3227
BmeT110I	CYCGRG	3 cut(s)	495, 1205, 2489
BmgT120I	GGNCC	6 cut(s)	1577, 2181, 2182, 2845, 2846, 3227
BmrFI	CCNGG	8 cut(s)	269, 1490, 1506, 1566, 1847, 1880, 3334, 3476
BmrI	ACTGGG	1 cut(s)	1144
BmuI	ACTGGG	1 cut(s)	1144
BpiI	GAAGAC	2 cut(s)	2736, 2847
BplI	GAGNNNNNCTC	2 cut(s)	2988, 3020
BpmI	CTGGAG	3 cut(s)	2081, 2361, 2990
Bpu1102I	GCTNAGC	2 cut(s)	1115, 2175
BpuEI	CTTGAG	3 cut(s)	935, 1052, 2383
BpuMI	CCSGG	2 cut(s)	269, 3334
BsaAI	YACGTR	1 cut(s)	3233
BsaBI	GATNNNNATC	1 cut(s)	3210
BsaHI	GRCGYC	2 cut(s)	514, 3472
BsaI	GGTCTC	1 cut(s)	1869
BsaJI	CCNNGG	9 cut(s)	357, 801, 1565, 1760, 1845, 2553, 3160, 3199, 3333
BsaWI	WCCGGW	1 cut(s)	3296
BsaXI	ACNNNNNCTCC	2 cut(s)	963, 993
Bsc4I	CCNNNNNNNGG	8 cut(s)	202, 715, 1419, 1746, 1885, 2337, 3303, 3475
Bse1I	ACTGG	9 cut(s)	550, 720, 1150, 2064, 2322, 2378, 2674, 3435, 3631
Bse3DI	GCAATG	2 cut(s)	2220, 2929
Bse8I	GATNNNNATC	1 cut(s)	3210
BseBI	CCWGG	6 cut(s)	1490, 1506, 1566, 1847, 1880, 3476
BseDI	CCNNGG	9 cut(s)	357, 801, 1565, 1760, 1845, 2553, 3160, 3199, 3333
BseJI	GATNNNNATC	1 cut(s)	3210
BseLI	CCNNNNNNNGG	8 cut(s)	202, 715, 1419, 1746, 1885, 2337, 3303, 3475
BseMI	GCAATG	2 cut(s)	2220, 2929
BseNI	ACTGG	9 cut(s)	550, 720, 1150, 2064, 2322, 2378, 2674, 3435, 3631
BseRI	GAGGAG	1 cut(s)	521
BseSI	GKGCMC	3 cut(s)	2185, 2354, 2849
BseXI	GCAGC	8 cut(s)	430, 667, 1123, 2653, 2898, 2919, 2941, 3437
BseYI	CCCAGC	3 cut(s)	383, 1637, 1834
BsgI	GTGCAG	2 cut(s)	437, 2897
BshFI	GGCC	9 cut(s)	65, 1578, 2183, 2330, 2540, 2673, 2847, 3159, 3520
BshNI	GGYRCC	3 cut(s)	95, 1698, 3471
BsiHKAI	GWGCWC	1 cut(s)	2490
BsiHKCI	CYCGRG	3 cut(s)	495, 1205, 2489
BsiSI	CCGG	5 cut(s)	269, 3297, 3333, 3469, 3517
BslFI	GGGAC	2 cut(s)	1396, 1400
BslI	CCNNNNNNNGG	8 cut(s)	202, 715, 1419, 1746, 1885, 2337, 3303, 3475
BsmAI	GTCTC	8 cut(s)	505, 976, 1311, 1869, 2459, 2486, 2552, 3639
BsmBI	CGTCTC	1 cut(s)	505
BsmFI	GGGAC	2 cut(s)	1396, 1400
BsnI	GGCC	9 cut(s)	65, 1578, 2183, 2330, 2540, 2673, 2847, 3159, 3520
Bso31I	GGTCTC	1 cut(s)	1869
BsoBI	CYCGRG	3 cut(s)	495, 1205, 2489
Bsp120I	GGGCCC	2 cut(s)	2181, 2845
Bsp1286I	GDGCHC	4 cut(s)	2185, 2354, 2490, 2849
Bsp1407I	TGTACA	1 cut(s)	2012
Bsp1720I	GCTNAGC	2 cut(s)	1115, 2175
Bsp19I	CCATGG	2 cut(s)	2553, 3160
BspACI	CCGC	5 cut(s)	1167, 1288, 2179, 2296, 3239
BspANI	GGCC	9 cut(s)	65, 1578, 2183, 2330, 2540, 2673, 2847, 3159, 3520
BspHI	TCATGA	2 cut(s)	363, 1065
BspMAI	CTGCAG	1 cut(s)	1002
BspMI	ACCTGC	3 cut(s)	4, 197, 3023
BspPI	GGATC	9 cut(s)	834, 1065, 1500, 2397, 3078, 3383, 3428, 3441, 3460
BspT107I	GGYRCC	3 cut(s)	95, 1698, 3471
BspTI	CTTAAG	2 cut(s)	2210, 2513
BspTNI	GGTCTC	1 cut(s)	1869
BsrBI	CCGCTC	2 cut(s)	1169, 1288
BsrDI	GCAATG	2 cut(s)	2220, 2929
BsrGI	TGTACA	1 cut(s)	2012
BsrI	ACTGG	9 cut(s)	550, 720, 1150, 2064, 2322, 2378, 2674, 3435, 3631
BssECI	CCNNGG	9 cut(s)	357, 801, 1565, 1760, 1845, 2553, 3160, 3199, 3333
BssNI	GRCGYC	2 cut(s)	514, 3472
BssSI	CACGAG	1 cut(s)	1170
BssT1I	CCWWGG	4 cut(s)	801, 2553, 3160, 3199
Bst2BI	CACGAG	1 cut(s)	1170
Bst2UI	CCWGG	6 cut(s)	1490, 1506, 1566, 1847, 1880, 3476
Bst4CI	ACNGT	3 cut(s)	987, 1864, 3349
Bst6I	CTCTTC	6 cut(s)	609, 1309, 2330, 2644, 2754, 3247
BstACI	GRCGYC	2 cut(s)	514, 3472
BstAFI	CTTAAG	2 cut(s)	2210, 2513
BstAPI	GCANNNNNTGC	2 cut(s)	997, 2908
BstAUI	TGTACA	1 cut(s)	2012
BstBAI	YACGTR	1 cut(s)	3233
BstC8I	GCNNGC	6 cut(s)	186, 706, 779, 1286, 2181, 3018
BstDSI	CCRYGG	3 cut(s)	1760, 2553, 3160
BstEII	GGTNACC	3 cut(s)	209, 3164, 3194
BstENI	CCTNNNNNAGG	1 cut(s)	1744
BstH2I	RGCGCY	1 cut(s)	3475
BstHHI	GCGC	3 cut(s)	1407, 3358, 3474
BstMAI	GTCTC	8 cut(s)	505, 976, 1311, 1869, 2459, 2486, 2552, 3639
BstNI	CCWGG	6 cut(s)	1490, 1506, 1566, 1847, 1880, 3476
BstNSI	RCATGY	2 cut(s)	188, 1358
BstPI	GGTNACC	3 cut(s)	209, 3164, 3194
BstSCI	CCNGG	8 cut(s)	267, 1488, 1504, 1564, 1845, 1878, 3332, 3474
BstSFI	CTRYAG	2 cut(s)	40, 998
BstSLI	GKGCMC	3 cut(s)	2185, 2354, 2849
BstV1I	GCAGC	8 cut(s)	430, 667, 1123, 2653, 2898, 2919, 2941, 3437
BstV2I	GAAGAC	2 cut(s)	2736, 2847
BstX2I	RGATCY	6 cut(s)	826, 2143, 2356, 2389, 2422, 3433
BstXI	CCANNNNNNTGG	1 cut(s)	808
BstYI	RGATCY	6 cut(s)	826, 2143, 2356, 2389, 2422, 3433
BsuRI	GGCC	9 cut(s)	65, 1578, 2183, 2330, 2540, 2673, 2847, 3159, 3520
BtgI	CCRYGG	3 cut(s)	1760, 2553, 3160
BtgZI	GCGATG	2 cut(s)	1617, 3397
BtsIMutI	CAGTG	3 cut(s)	443, 2385, 3428
BveI	ACCTGC	3 cut(s)	4, 197, 3023
Cac8I	GCNNGC	6 cut(s)	186, 706, 779, 1286, 2181, 3018
CaiI	CAGNNNCTG	2 cut(s)	997, 2602
CciI	TCATGA	2 cut(s)	363, 1065
CfoI	GCGC	3 cut(s)	1407, 3358, 3474
Cfr13I	GGNCC	6 cut(s)	1577, 2181, 2182, 2845, 2846, 3227
Csp6I	GTAC	5 cut(s)	143, 583, 1905, 2013, 3099
CspCI	CAANNNNNGTGG	2 cut(s)	1939, 1974
CviQI	GTAC	5 cut(s)	143, 583, 1905, 2013, 3099
DinI	GGCGCC	1 cut(s)	3473
DraI	TTTAAA	1 cut(s)	3106
DraIII	CACNNNGTG	1 cut(s)	1660
EaeI	YGGCCR	4 cut(s)	2328, 2671, 3157, 3518
Eam1104I	CTCTTC	6 cut(s)	609, 1309, 2330, 2644, 2754, 3247
EarI	CTCTTC	6 cut(s)	609, 1309, 2330, 2644, 2754, 3247
Ecl136II	GAGCTC	1 cut(s)	2488
Eco130I	CCWWGG	4 cut(s)	801, 2553, 3160, 3199
Eco147I	AGGCCT	1 cut(s)	65
Eco24I	GRGCYC	3 cut(s)	2185, 2490, 2849
Eco31I	GGTCTC	1 cut(s)	1869
Eco32I	GATATC	2 cut(s)	948, 2089
Eco47I	GGWCC	1 cut(s)	3227
Eco53kI	GAGCTC	1 cut(s)	2488
Eco57I	CTGAAG	6 cut(s)	52, 497, 680, 1232, 2735, 2841
Eco72I	CACGTG	1 cut(s)	3233
Eco88I	CYCGRG	3 cut(s)	495, 1205, 2489
Eco91I	GGTNACC	3 cut(s)	209, 3164, 3194
EcoICRI	GAGCTC	1 cut(s)	2488
EcoNI	CCTNNNNNAGG	1 cut(s)	1744
EcoO65I	GGTNACC	3 cut(s)	209, 3164, 3194
EcoRI	GAATTC	1 cut(s)	1780
EcoRII	CCWGG	6 cut(s)	1488, 1504, 1564, 1845, 1878, 3474
EcoRV	GATATC	2 cut(s)	948, 2089
EcoT14I	CCWWGG	4 cut(s)	801, 2553, 3160, 3199
EcoT22I	ATGCAT	1 cut(s)	3610
EcoT38I	GRGCYC	3 cut(s)	2185, 2490, 2849
EgeI	GGCGCC	1 cut(s)	3473
EheI	GGCGCC	1 cut(s)	3473
ErhI	CCWWGG	4 cut(s)	801, 2553, 3160, 3199
Esp3I	CGTCTC	1 cut(s)	505
FalI	AAGNNNNNCTT	4 cut(s)	2076, 2108, 2421, 2453
FaqI	GGGAC	2 cut(s)	1396, 1400
FauI	CCCGC	2 cut(s)	1281, 2172
FbaI	TGATCA	5 cut(s)	1939, 2308, 2365, 2968, 3211
Fnu4HI	GCNGC	9 cut(s)	419, 656, 1112, 1167, 2642, 2912, 2930, 2933, 3426
FriOI	GRGCYC	3 cut(s)	2185, 2490, 2849
Fsp4HI	GCNGC	9 cut(s)	419, 656, 1112, 1167, 2642, 2912, 2930, 2933, 3426
FspBI	CTAG	6 cut(s)	1916, 2201, 2534, 2613, 2771, 3117
GlaI	GCGC	3 cut(s)	1406, 3357, 3473
GluI	GCNGC	9 cut(s)	419, 656, 1112, 1167, 2642, 2912, 2930, 2933, 3426
GsaI	CCCAGC	3 cut(s)	387, 1641, 1838
GsuI	CTGGAG	3 cut(s)	2081, 2361, 2990
HaeII	RGCGCY	1 cut(s)	3475
HaeIII	GGCC	9 cut(s)	65, 1578, 2183, 2330, 2540, 2673, 2847, 3159, 3520
HapII	CCGG	5 cut(s)	269, 3297, 3333, 3469, 3517
HhaI	GCGC	3 cut(s)	1407, 3358, 3474
Hin1I	GRCGYC	2 cut(s)	514, 3472
Hin6I	GCGC	3 cut(s)	1405, 3356, 3472
HinP1I	GCGC	3 cut(s)	1405, 3356, 3472
HincII	GTYRAC	4 cut(s)	759, 2041, 2953, 3586
HindII	GTYRAC	4 cut(s)	759, 2041, 2953, 3586
HindIII	AAGCTT	2 cut(s)	846, 2435
HpaII	CCGG	5 cut(s)	269, 3297, 3333, 3469, 3517
HphI	GGTGA	9 cut(s)	203, 1520, 1762, 1949, 2588, 3047, 3188, 3215, 3586
Hpy166II	GTNNAC	6 cut(s)	759, 1721, 2013, 2041, 2953, 3586
Hpy8I	GTNNAC	6 cut(s)	759, 1721, 2013, 2041, 2953, 3586
Hpy99I	CGWCG	1 cut(s)	519
HpyCH4III	ACNGT	3 cut(s)	987, 1864, 3349
Hsp92I	GRCGYC	2 cut(s)	514, 3472
HspAI	GCGC	3 cut(s)	1405, 3356, 3472
KasI	GGCGCC	1 cut(s)	3471
Ksp22I	TGATCA	5 cut(s)	1939, 2308, 2365, 2968, 3211
LmnI	GCTCC	8 cut(s)	171, 401, 962, 1188, 1237, 1762, 1825, 3400
Lsp1109I	GCAGC	8 cut(s)	430, 667, 1123, 2653, 2898, 2919, 2941, 3437
MaeI	CTAG	6 cut(s)	1916, 2201, 2534, 2613, 2771, 3117
MbiI	CCGCTC	2 cut(s)	1169, 1288
MflI	RGATCY	6 cut(s)	826, 2143, 2356, 2389, 2422, 3433
MhlI	GDGCHC	4 cut(s)	2185, 2354, 2490, 2849
MlsI	TGGCCA	3 cut(s)	2330, 2673, 3159
MluNI	TGGCCA	3 cut(s)	2330, 2673, 3159
Mly113I	GGCGCC	1 cut(s)	3472
MlyI	GAGTC	9 cut(s)	449, 988, 1313, 1495, 2308, 2480, 2602, 2740, 3264
MmeI	TCCRAC	1 cut(s)	3436
Mox20I	TGGCCA	3 cut(s)	2330, 2673, 3159
Mph1103I	ATGCAT	1 cut(s)	3610
MroXI	GAANNNNTTC	2 cut(s)	122, 2653
MscI	TGGCCA	3 cut(s)	2330, 2673, 3159
MslI	CAYNNNNRTG	2 cut(s)	497, 3201
Msp20I	TGGCCA	3 cut(s)	2330, 2673, 3159
MspA1I	CMGCKG	2 cut(s)	2932, 3452
MspCI	CTTAAG	2 cut(s)	2210, 2513
MspI	CCGG	5 cut(s)	269, 3297, 3333, 3469, 3517
MspR9I	CCNGG	8 cut(s)	269, 1490, 1506, 1566, 1847, 1880, 3334, 3476
MvaI	CCWGG	6 cut(s)	1490, 1506, 1566, 1847, 1880, 3476
NarI	GGCGCC	1 cut(s)	3472
NciI	CCSGG	2 cut(s)	269, 3334
NcoI	CCATGG	2 cut(s)	2553, 3160
NmeAIII	GCCGAG	1 cut(s)	3046
NmuCI	GTSAC	6 cut(s)	149, 209, 1172, 1350, 1377, 3194
NsiI	ATGCAT	1 cut(s)	3610
NspI	RCATGY	2 cut(s)	188, 1358
OliI	CACNNNNGTG	2 cut(s)	497, 3201
PaeI	GCATGC	1 cut(s)	188
PaeR7I	CTCGAG	2 cut(s)	1205, 2489
PagI	TCATGA	2 cut(s)	363, 1065
PaqCI	CACCTGC	1 cut(s)	3023
PceI	AGGCCT	1 cut(s)	65
PcsI	WCGNNNNNNNCGW	1 cut(s)	113
PdmI	GAANNNNTTC	2 cut(s)	122, 2653
PfeI	GAWTC	6 cut(s)	264, 1016, 1042, 1334, 2694, 3086
PflFI	GACNNNGTC	1 cut(s)	2470
PflMI	CCANNNNNTGG	1 cut(s)	715
PkrI	GCNGC	9 cut(s)	420, 657, 1113, 1168, 2643, 2913, 2931, 2934, 3427
PleI	GAGTC	9 cut(s)	449, 988, 1312, 1495, 2307, 2479, 2601, 2740, 3263
PluTI	GGCGCC	1 cut(s)	3475
PmaCI	CACGTG	1 cut(s)	3233
PmlI	CACGTG	1 cut(s)	3233
PpsI	GAGTC	9 cut(s)	449, 988, 1312, 1495, 2307, 2479, 2601, 2740, 3263
Ppu21I	YACGTR	1 cut(s)	3233
PsiI	TTATAA	2 cut(s)	20, 3503
Psp124BI	GAGCTC	1 cut(s)	2490
Psp1406I	AACGTT	1 cut(s)	3588
Psp6I	CCWGG	6 cut(s)	1488, 1504, 1564, 1845, 1878, 3474
PspCI	CACGTG	1 cut(s)	3233
PspEI	GGTNACC	3 cut(s)	209, 3164, 3194
PspFI	CCCAGC	3 cut(s)	383, 1637, 1834
PspGI	CCWGG	6 cut(s)	1488, 1504, 1564, 1845, 1878, 3474
PspOMI	GGGCCC	2 cut(s)	2181, 2845
PspPI	GGNCC	6 cut(s)	1577, 2181, 2182, 2845, 2846, 3227
PstI	CTGCAG	1 cut(s)	1002
PstNI	CAGNNNCTG	2 cut(s)	997, 2602
PsuI	RGATCY	6 cut(s)	826, 2143, 2356, 2389, 2422, 3433
PsyI	GACNNNGTC	1 cut(s)	2470
PvuII	CAGCTG	2 cut(s)	2932, 3452
RsaI	GTAC	5 cut(s)	144, 584, 1906, 2014, 3100
RsaNI	GTAC	5 cut(s)	143, 583, 1905, 2013, 3099
RseI	CAYNNNNRTG	2 cut(s)	497, 3201
SacI	GAGCTC	1 cut(s)	2490
SatI	GCNGC	9 cut(s)	419, 656, 1112, 1167, 2642, 2912, 2930, 2933, 3426
Sau96I	GGNCC	6 cut(s)	1577, 2181, 2182, 2845, 2846, 3227
ScaI	AGTACT	1 cut(s)	584
SchI	GAGTC	9 cut(s)	449, 988, 1313, 1495, 2308, 2480, 2602, 2740, 3264
ScrFI	CCNGG	8 cut(s)	269, 1490, 1506, 1566, 1847, 1880, 3334, 3476
SduI	GDGCHC	4 cut(s)	2185, 2354, 2490, 2849
SfcI	CTRYAG	2 cut(s)	40, 998
SfoI	GGCGCC	1 cut(s)	3473
Sfr274I	CTCGAG	2 cut(s)	1205, 2489
SinI	GGWCC	1 cut(s)	3227
SlaI	CTCGAG	2 cut(s)	1205, 2489
SmiMI	CAYNNNNRTG	2 cut(s)	497, 3201
SmlI	CTYRAG	7 cut(s)	914, 1031, 1205, 2210, 2398, 2489, 2513
SmoI	CTYRAG	7 cut(s)	914, 1031, 1205, 2210, 2398, 2489, 2513
SphI	GCATGC	1 cut(s)	188
SseBI	AGGCCT	1 cut(s)	65
SsiI	CCGC	5 cut(s)	1167, 1288, 2179, 2296, 3239
SspDI	GGCGCC	1 cut(s)	3471
SspI	AATATT	1 cut(s)	2112
SspMI	CTAG	6 cut(s)	1916, 2201, 2534, 2613, 2771, 3117
SstI	GAGCTC	1 cut(s)	2490
StuI	AGGCCT	1 cut(s)	65
StyD4I	CCNGG	8 cut(s)	267, 1488, 1504, 1564, 1845, 1878, 3332, 3474
StyI	CCWWGG	4 cut(s)	801, 2553, 3160, 3199
TaaI	ACNGT	3 cut(s)	987, 1864, 3349
TatI	WGTACW	3 cut(s)	142, 582, 2012
TauI	GCSGC	1 cut(s)	1169
TfiI	GAWTC	6 cut(s)	264, 1016, 1042, 1334, 2694, 3086
TscAI	CASTG	3 cut(s)	450, 2385, 3435
TseFI	GTSAC	6 cut(s)	149, 209, 1172, 1350, 1377, 3194
TseI	GCWGC	8 cut(s)	418, 655, 1111, 2641, 2911, 2929, 2932, 3425
Tsp45I	GTSAC	6 cut(s)	149, 209, 1172, 1350, 1377, 3194
TspRI	CASTG	3 cut(s)	450, 2385, 3435
Tth111I	GACNNNGTC	1 cut(s)	2470
Van91I	CCANNNNNTGG	1 cut(s)	715
Vha464I	CTTAAG	2 cut(s)	2210, 2513
VpaK11BI	GGWCC	1 cut(s)	3227
XagI	CCTNNNNNAGG	1 cut(s)	1744
XbaI	TCTAGA	1 cut(s)	1915
XceI	RCATGY	2 cut(s)	188, 1358
XhoI	CTCGAG	2 cut(s)	1205, 2489
XmnI	GAANNNNTTC	2 cut(s)	122, 2653
XspI	CTAG	6 cut(s)	1916, 2201, 2534, 2613, 2771, 3117
ZraI	GACGTC	1 cut(s)	515
ZrmI	AGTACT	1 cut(s)	584
Zsp2I	ATGCAT	1 cut(s)	3610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.