AT2G32020

Acetyltransferase (GNAT) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0002623
Physical Location & Seq
Reverse (-)
13630980 .. 13631929
950 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32020.1

Sequence Viewer

Length: 552 bp
ATGGAGATGGACTCAGAAGAAACTAATCCAATAATGAGCTCTTCGCCTCCGGGAAGAATATCTCTCCGGCCGATGACTCTTTCCGACGTCGATGACTACATGGTTTGGGCCACAGATCCTAAAGTGGCTCGATTTTGCACTTGGGAGCCTTGCACGAGCCGAGACGAAGCTATCAAATACATAACCGATCGTGTCCTGACACACCCTTGGCTCCGAGCCATCTGCTTAGAAGACGACCGTCCAATCGGCTACATCTTGATCATGGCGGTTGATAACATCAGAAAAGAGATTGGTTATGTCCTAGCGAGAAAGTATTGGGGAAAAGGGTTTGCCACGGAAGCAGTGAGGCTAGTGACCGCGGAGGTATTCGAGGAATTTCCAGAGATTGAAAGGCTTGAGGCACTTGTTGATGTGGACAATGTTGGATCTCAAAGGGTTCTTGAAAAAGTTGGGTTTACTAGAGAAGGTGTGATGAGGAAGTTTATATGTATCAAGGGAAGTGTAAGAGACACTGTTATGTTTAGTTTCTTGTCTACTGATACTTTGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_3

Protein Analysis

183

Amino Acids

21.0

Weight (kDa)

4.99

Isoelectric Point (pI)

34.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_3 PF13302 19 - 153 3.7e-32 Acetyltransferase (GNAT) domain
Acetyltransf_4 PF13420 23 - 173 2.6e-07 Acetyltransferase (GNAT) domain
Acetyltransf_8 PF13523 28 - 157 6.2e-06 Acetyltransferase (GNAT) domain
Acetyltransf_1 PF00583 61 - 152 5e-12 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 90
AccI GTMKAC 1 cut(s) 533
AccII CGCG 1 cut(s) 359
AciI CCGC 3 cut(s) 266, 357, 359
AclWI GGATC 2 cut(s) 110, 433
AcoI YGGCCR 1 cut(s) 68
AcsI RAATTY 1 cut(s) 374
AcyI GRCGYC 1 cut(s) 87
AgsI TTSAA 3 cut(s) 389, 443, 547
AluBI AGCT 2 cut(s) 39, 170
AluI AGCT 2 cut(s) 39, 170
Alw21I GWGCWC 1 cut(s) 41
Alw26I GTCTC 2 cut(s) 156, 501
AlwI GGATC 2 cut(s) 110, 433
AoxI GGCC 2 cut(s) 68, 108
ApoI RAATTY 1 cut(s) 374
AspS9I GGNCC 1 cut(s) 108
AsuC2I CCSGG 1 cut(s) 51
BanII GRGCYC 1 cut(s) 41
BauI CACGAG 1 cut(s) 154
BbsI GAAGAC 1 cut(s) 237
Bbv12I GWGCWC 1 cut(s) 41
BccI CCATC 1 cut(s) 227
BcgI CGANNNNNNTGC 2 cut(s) 204, 238
BclI TGATCA 1 cut(s) 258
BcnI CCSGG 1 cut(s) 51
BcoDI GTCTC 2 cut(s) 156, 501
BfaI CTAG 3 cut(s) 302, 350, 459
Bme1390I CCNGG 1 cut(s) 51
BmgT120I GGNCC 1 cut(s) 108
BmiI GGNNCC 2 cut(s) 147, 212
BmrFI CCNGG 1 cut(s) 51
BoxI GACNNNNGTC 1 cut(s) 237
BpiI GAAGAC 1 cut(s) 237
BplI GAGNNNNNCTC 1 cut(s) 28
BpuEI CTTGAG 1 cut(s) 416
BpuMI CCSGG 1 cut(s) 51
BsaHI GRCGYC 1 cut(s) 87
BsaJI CCNNGG 3 cut(s) 206, 333, 357
BseDI CCNNGG 3 cut(s) 206, 333, 357
BseMII CTCAG 1 cut(s) 27
BseX3I CGGCCG 1 cut(s) 68
Bsh1236I CGCG 1 cut(s) 359
Bsh1285I CGRYCG 3 cut(s) 71, 190, 238
BshFI GGCC 2 cut(s) 70, 110
BsiEI CGRYCG 3 cut(s) 71, 190, 238
BsiHKAI GWGCWC 1 cut(s) 41
BsiSI CCGG 2 cut(s) 50, 67
BsmAI GTCTC 2 cut(s) 156, 501
BsmBI CGTCTC 1 cut(s) 156
BsnI GGCC 2 cut(s) 70, 110
Bsp1286I GDGCHC 1 cut(s) 41
Bsp143I GATC 4 cut(s) 115, 187, 258, 425
BspACI CCGC 3 cut(s) 266, 357, 359
BspANI GGCC 2 cut(s) 70, 110
BspCNI CTCAG 1 cut(s) 26
BspFNI CGCG 1 cut(s) 359
BspLI GGNNCC 2 cut(s) 147, 212
BspPI GGATC 2 cut(s) 110, 433
BspQI GCTCTTC 1 cut(s) 46
BssECI CCNNGG 3 cut(s) 206, 333, 357
BssMI GATC 4 cut(s) 115, 187, 258, 425
BssNI GRCGYC 1 cut(s) 87
BssSI CACGAG 1 cut(s) 154
BssT1I CCWWGG 1 cut(s) 206
Bst2BI CACGAG 1 cut(s) 154
Bst4CI ACNGT 2 cut(s) 239, 514
Bst6I CTCTTC 1 cut(s) 46
BstACI GRCGYC 1 cut(s) 87
BstDEI CTNAG 2 cut(s) 13, 226
BstDSI CCRYGG 2 cut(s) 333, 357
BstFNI CGCG 1 cut(s) 359
BstKTI GATC 4 cut(s) 118, 190, 261, 428
BstMAI GTCTC 2 cut(s) 156, 501
BstMBI GATC 4 cut(s) 115, 187, 258, 425
BstMCI CGRYCG 3 cut(s) 71, 190, 238
BstMWI GCNNNNNNNGC 1 cut(s) 338
BstPAI GACNNNNGTC 1 cut(s) 237
BstSCI CCNGG 1 cut(s) 49
BstUI CGCG 1 cut(s) 359
BstV2I GAAGAC 1 cut(s) 237
BstX2I RGATCY 2 cut(s) 115, 425
BstYI RGATCY 2 cut(s) 115, 425
BstZI CGGCCG 1 cut(s) 68
BsuRI GGCC 2 cut(s) 70, 110
BtgI CCRYGG 2 cut(s) 333, 357
BtsI GCAGTG 1 cut(s) 348
BtsIMutI CAGTG 2 cut(s) 348, 510
Cfr13I GGNCC 1 cut(s) 108
Cfr42I CCGCGG 1 cut(s) 360
CviAII CATG 2 cut(s) 100, 262
DdeI CTNAG 2 cut(s) 13, 226
DpnI GATC 4 cut(s) 117, 189, 260, 427
DpnII GATC 4 cut(s) 115, 187, 258, 425
EaeI YGGCCR 1 cut(s) 68
EagI CGGCCG 1 cut(s) 68
Eam1104I CTCTTC 1 cut(s) 46
EarI CTCTTC 1 cut(s) 46
Ecl136II GAGCTC 1 cut(s) 39
EclXI CGGCCG 1 cut(s) 68
Eco130I CCWWGG 1 cut(s) 206
Eco24I GRGCYC 1 cut(s) 41
Eco52I CGGCCG 1 cut(s) 68
Eco53kI GAGCTC 1 cut(s) 39
EcoICRI GAGCTC 1 cut(s) 39
EcoT14I CCWWGG 1 cut(s) 206
EcoT38I GRGCYC 1 cut(s) 41
ErhI CCWWGG 1 cut(s) 206
Esp3I CGTCTC 1 cut(s) 156
FaeI CATG 2 cut(s) 103, 265
FaiI YATR 7 cut(s) 101, 182, 263, 297, 485, 487, 518
FatI CATG 2 cut(s) 99, 261
FbaI TGATCA 1 cut(s) 258
FblI GTMKAC 1 cut(s) 533
FriOI GRGCYC 1 cut(s) 41
FspBI CTAG 3 cut(s) 302, 350, 459
HaeIII GGCC 2 cut(s) 70, 110
HapII CCGG 2 cut(s) 50, 67
Hin1I GRCGYC 1 cut(s) 87
Hin1II CATG 2 cut(s) 103, 265
HinfI GANTC 2 cut(s) 11, 76
HpaII CCGG 2 cut(s) 50, 67
Hpy166II GTNNAC 3 cut(s) 415, 456, 534
Hpy188I TCNGA 4 cut(s) 16, 85, 215, 281
Hpy188III TCNNGA 4 cut(s) 196, 256, 380, 440
Hpy8I GTNNAC 3 cut(s) 415, 456, 534
Hpy99I CGWCG 2 cut(s) 89, 92
HpyAV CCTTC 1 cut(s) 458
HpyCH4III ACNGT 2 cut(s) 239, 514
HpyCH4IV ACGT 1 cut(s) 87
HpyCH4V TGCA 2 cut(s) 138, 153
HpyF10VI GCNNNNNNNGC 1 cut(s) 338
HpyF3I CTNAG 2 cut(s) 13, 226
HpySE526I ACGT 1 cut(s) 87
Hsp92I GRCGYC 1 cut(s) 87
Hsp92II CATG 2 cut(s) 103, 265
Ksp22I TGATCA 1 cut(s) 258
KspI CCGCGG 1 cut(s) 360
Kzo9I GATC 4 cut(s) 115, 187, 258, 425
LguI GCTCTTC 1 cut(s) 46
LmnI GCTCC 2 cut(s) 145, 216
LpnPI CCDG 4 cut(s) 63, 80, 209, 393
MaeI CTAG 3 cut(s) 302, 350, 459
MaeII ACGT 1 cut(s) 87
MaeIII GTNAC 1 cut(s) 352
MalI GATC 4 cut(s) 117, 189, 260, 427
MboI GATC 4 cut(s) 115, 187, 258, 425
MboII GAAGA 4 cut(s) 29, 33, 66, 242
MflI RGATCY 2 cut(s) 115, 425
MhlI GDGCHC 1 cut(s) 41
MluCI AATT 1 cut(s) 374
MlyI GAGTC 2 cut(s) 5, 70
MmeI TCCRAC 2 cut(s) 108, 403
MnlI CCTC 6 cut(s) 57, 339, 355, 364, 391, 468
MslI CAYNNNNRTG 1 cut(s) 515
MspA1I CMGCKG 1 cut(s) 359
MspI CCGG 2 cut(s) 50, 67
MspR9I CCNGG 1 cut(s) 51
MvnI CGCG 1 cut(s) 359
MwoI GCNNNNNNNGC 1 cut(s) 338
NciI CCSGG 1 cut(s) 51
NdeII GATC 4 cut(s) 115, 187, 258, 425
NlaIII CATG 2 cut(s) 103, 265
NlaIV GGNNCC 2 cut(s) 147, 212
NmeAIII GCCGAG 1 cut(s) 185
NmuCI GTSAC 1 cut(s) 352
PciSI GCTCTTC 1 cut(s) 46
PfoI TCCNGGA 1 cut(s) 49
Ple19I CGATCG 1 cut(s) 190
PleI GAGTC 2 cut(s) 5, 70
PpsI GAGTC 2 cut(s) 5, 70
PshAI GACNNNNGTC 1 cut(s) 237
Psp124BI GAGCTC 1 cut(s) 41
PspN4I GGNNCC 2 cut(s) 147, 212
PspPI GGNCC 1 cut(s) 108
PsuI RGATCY 2 cut(s) 115, 425
PvuI CGATCG 1 cut(s) 190
RseI CAYNNNNRTG 1 cut(s) 515
SacI GAGCTC 1 cut(s) 41
SacII CCGCGG 1 cut(s) 360
SapI GCTCTTC 1 cut(s) 46
Sau3AI GATC 4 cut(s) 115, 187, 258, 425
Sau96I GGNCC 1 cut(s) 108
SchI GAGTC 2 cut(s) 5, 70
ScrFI CCNGG 1 cut(s) 51
SduI GDGCHC 1 cut(s) 41
SetI ASST 5 cut(s) 41, 90, 172, 366, 469
Sfr303I CCGCGG 1 cut(s) 360
SgrBI CCGCGG 1 cut(s) 360
SmiMI CAYNNNNRTG 1 cut(s) 515
SmlI CTYRAG 1 cut(s) 395
SmoI CTYRAG 1 cut(s) 395
Sse9I AATT 1 cut(s) 374
SsiI CCGC 3 cut(s) 266, 357, 359
SspMI CTAG 3 cut(s) 302, 350, 459
SstI GAGCTC 1 cut(s) 41
StyD4I CCNGG 1 cut(s) 49
StyI CCWWGG 1 cut(s) 206
TaaI ACNGT 2 cut(s) 239, 514
TaiI ACGT 1 cut(s) 90
TaqI TCGA 3 cut(s) 90, 130, 369
TasI AATT 1 cut(s) 374
TscAI CASTG 2 cut(s) 348, 517
TseFI GTSAC 1 cut(s) 352
Tsp45I GTSAC 1 cut(s) 352
TspGWI ACGGA 1 cut(s) 350
TspRI CASTG 2 cut(s) 348, 517
XapI RAATTY 1 cut(s) 374
XmiI GTMKAC 1 cut(s) 533
XspI CTAG 3 cut(s) 302, 350, 459
ZraI GACGTC 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.