Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002623

Physical Location & Seq

Genomic Coordinates Forward (+)

1180237 .. 1180772

Gene Structure 536 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G016700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 531 bp

ATGGAGGGAAGTTCTGATATTGATCTCTCCAAGATCAGCCTTAGGCCATTGGGTCTCGCTGACATTGATGATTTCATGGTGTGGGGTACAGATGAGAAGGTCGCTATTTTCTGCACTTGGGAACCTTATGCTACCAAAGAAGAAGCCCTAAACTATATCAAAGAGAAGATTCTCCCACAAACCCCTGGTTCAGGGCAATCTGCCTTGACAACAGGCCAATTGGTGCCATTTTGCTCAAATTCCGGCAGTGACCGGTGCAGAGGTGAACTTGGCTATGTCTTGGGGTCCAAGTATTGGGGCAAGGGGATTGCAACCCAGGCTGTGAAATTGGTGGCTGATACTATTTTTAAAGAGTGGACACATTTGGAAAGACTTGAAGCTTTTGTTGATGTGGACAATGTGGGATCACAGAGGGTTCTTGAGAAGTCTGGTTTCCTCAGGGAAGGTGTTCTTAGAAAGTTTTTTATTCTGAAGGGAAGAACTAGGGACATGGTGATATTCAGCCTTCTTTCTACAGAATGTGAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_3

Protein Analysis

177

Amino Acids

19.6

Weight (kDa)

5.15

Isoelectric Point (pI)

17.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002623)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32020 AT2G32030
fragaria_vesca	FvH4_4g16130 FvH4_4g16140 FvH4_4g26600
malus_domestica	MD13G1195600.v1.1 MD16G1196400.v1.1 MD16G1196500.v1.1
prunus_persica	Prupe.1G016600_v2.0.a1 Prupe.1G016700_v2.0.a1
pyrus_communis	pycom13g16790
rosa_chinensis	RchiOBHm_Chr4g0415651 RchiOBHm_Chr4g0415661 RchiOBHm_Chr4g0415691
rosa_laevigata	RLG00000008050 RLG00000008051 RLG00000008052
rosa_multiflora	Rmu_co8195074.1_g000001 Rmu_sc0004536.1_g000001 Rmu_sc0004536.1_g000002 Rmu_sc0004540.1_g000030
rosa_roxburghii	Rroxscaffold_5G00355360 Rroxscaffold_5G00355390 Rroxscaffold_5G00359480 Rroxscaffold_5G00359500
rosa_rugosa	Rorug04G0113500 Rorug04G0113500 Rorug04G0136100 Rorug04G0136200
rosa_samantha	Rh4AG197000 Rh4AG197100 Rh4BG195500 Rh4BG195600 Rh4CG207700 Rh4CG207900 Rh4CG208200 Rh4DG194800 Rh4DG194900
rosa_wichuraiana	Rw4G016750 Rw4G016760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	223
AccB7I	CCANNNNNTGG	1 cut(s)	294
AclWI	GGATC	1 cut(s)	412
AcsI	RAATTY	1 cut(s)	238
AcuI	CTGAAG	1 cut(s)	491
AfaI	GTAC	1 cut(s)	88
AfiI	CCNNNNNNNGG	2 cut(s)	191, 294
AgeI	ACCGGT	1 cut(s)	252
AgsI	TTSAA	1 cut(s)	377
AjnI	CCWGG	2 cut(s)	184, 315
AluBI	AGCT	2 cut(s)	380, 527
AluI	AGCT	2 cut(s)	380, 527
Alw26I	GTCTC	1 cut(s)	59
AlwI	GGATC	1 cut(s)	412
AoxI	GGCC	2 cut(s)	44, 214
ApoI	RAATTY	1 cut(s)	238
AsiGI	ACCGGT	1 cut(s)	252
Asp700I	GAANNNNTTC	1 cut(s)	447
AspS9I	GGNCC	1 cut(s)	285
AsuHPI	GGTGA	2 cut(s)	275, 505
AvaII	GGWCC	1 cut(s)	285
AxyI	CCTNAGG	2 cut(s)	41, 437
BanI	GGYRCC	1 cut(s)	223
BciT130I	CCWGG	2 cut(s)	186, 317
BcoDI	GTCTC	1 cut(s)	59
BfaI	CTAG	1 cut(s)	483
BfmI	CTRYAG	1 cut(s)	513
Bme1390I	CCNGG	2 cut(s)	186, 317
Bme18I	GGWCC	1 cut(s)	285
BmgT120I	GGNCC	1 cut(s)	285
BmiI	GGNNCC	3 cut(s)	123, 225, 286
BmrFI	CCNGG	2 cut(s)	186, 317
BpuEI	CTTGAG	1 cut(s)	440
BsaBI	GATNNNNATC	1 cut(s)	21
BsaI	GGTCTC	1 cut(s)	59
BsaJI	CCNNGG	2 cut(s)	184, 315
BsaWI	WCCGGW	1 cut(s)	252
Bsc4I	CCNNNNNNNGG	2 cut(s)	191, 294
Bse118I	RCCGGY	1 cut(s)	252
Bse21I	CCTNAGG	2 cut(s)	41, 437
Bse8I	GATNNNNATC	1 cut(s)	21
BseBI	CCWGG	2 cut(s)	186, 317
BseDI	CCNNGG	2 cut(s)	184, 315
BseJI	GATNNNNATC	1 cut(s)	21
BseLI	CCNNNNNNNGG	2 cut(s)	191, 294
BseMII	CTCAG	1 cut(s)	451
BsgI	GTGCAG	2 cut(s)	97, 277
BshFI	GGCC	2 cut(s)	46, 216
BshNI	GGYRCC	1 cut(s)	223
BshTI	ACCGGT	1 cut(s)	252
BsiSI	CCGG	2 cut(s)	243, 253
BslFI	GGGAC	1 cut(s)	500
BslI	CCNNNNNNNGG	2 cut(s)	191, 294
BsmAI	GTCTC	1 cut(s)	59
BsmFI	GGGAC	1 cut(s)	500
BsnI	GGCC	2 cut(s)	46, 216
Bso31I	GGTCTC	1 cut(s)	59
Bsp143I	GATC	3 cut(s)	22, 33, 404
BspANI	GGCC	2 cut(s)	46, 216
BspCNI	CTCAG	1 cut(s)	450
BspLI	GGNNCC	3 cut(s)	123, 225, 286
BspPI	GGATC	1 cut(s)	412
BspT107I	GGYRCC	1 cut(s)	223
BspTNI	GGTCTC	1 cut(s)	59
BsrFI	RCCGGY	1 cut(s)	252
BssAI	RCCGGY	1 cut(s)	252
BssECI	CCNNGG	2 cut(s)	184, 315
BssMI	GATC	3 cut(s)	22, 33, 404
Bst2UI	CCWGG	2 cut(s)	186, 317
BstDEI	CTNAG	3 cut(s)	41, 437, 452
BstENI	CCTNNNNNAGG	1 cut(s)	189
BstKTI	GATC	3 cut(s)	25, 36, 407
BstMAI	GTCTC	1 cut(s)	59
BstMBI	GATC	3 cut(s)	22, 33, 404
BstMWI	GCNNNNNNNGC	1 cut(s)	317
BstNI	CCWGG	2 cut(s)	186, 317
BstSCI	CCNGG	2 cut(s)	184, 315
BstSFI	CTRYAG	1 cut(s)	513
Bsu36I	CCTNAGG	2 cut(s)	41, 437
BsuRI	GGCC	2 cut(s)	46, 216
BtsI	GCAGTG	1 cut(s)	253
BtsIMutI	CAGTG	1 cut(s)	253
Cfr10I	RCCGGY	1 cut(s)	252
Cfr13I	GGNCC	1 cut(s)	285
Csp6I	GTAC	1 cut(s)	87
CspAI	ACCGGT	1 cut(s)	252
CviAII	CATG	2 cut(s)	76, 490
CviQI	GTAC	1 cut(s)	87
DdeI	CTNAG	3 cut(s)	41, 437, 452
DpnI	GATC	3 cut(s)	24, 35, 406
DpnII	GATC	3 cut(s)	22, 33, 404
DraI	TTTAAA	1 cut(s)	349
Eco31I	GGTCTC	1 cut(s)	59
Eco47I	GGWCC	1 cut(s)	285
Eco57I	CTGAAG	1 cut(s)	491
Eco81I	CCTNAGG	2 cut(s)	41, 437
EcoNI	CCTNNNNNAGG	1 cut(s)	189
EcoRII	CCWGG	2 cut(s)	184, 315
FaeI	CATG	2 cut(s)	79, 493
FaiI	YATR	5 cut(s)	77, 129, 156, 276, 491
FalI	AAGNNNNNCTT	2 cut(s)	435, 467
FaqI	GGGAC	1 cut(s)	500
FatI	CATG	2 cut(s)	75, 489
FspBI	CTAG	1 cut(s)	483
HaeIII	GGCC	2 cut(s)	46, 216
HapII	CCGG	2 cut(s)	243, 253
Hin1II	CATG	2 cut(s)	79, 493
HindIII	AAGCTT	2 cut(s)	378, 525
HinfI	GANTC	1 cut(s)	169
HpaII	CCGG	2 cut(s)	243, 253
HphI	GGTGA	2 cut(s)	275, 505
Hpy166II	GTNNAC	3 cut(s)	266, 357, 394
Hpy188I	TCNGA	2 cut(s)	16, 471
Hpy188III	TCNNGA	1 cut(s)	419
Hpy8I	GTNNAC	3 cut(s)	266, 357, 394
HpyAV	CCTTC	4 cut(s)	91, 437, 466, 515
HpyCH4V	TGCA	3 cut(s)	114, 258, 311
HpyF10VI	GCNNNNNNNGC	1 cut(s)	317
HpyF3I	CTNAG	3 cut(s)	41, 437, 452
Hsp92II	CATG	2 cut(s)	79, 493
Kzo9I	GATC	3 cut(s)	22, 33, 404
MaeI	CTAG	1 cut(s)	483
MaeIII	GTNAC	1 cut(s)	248
MalI	GATC	3 cut(s)	24, 35, 406
MboI	GATC	3 cut(s)	22, 33, 404
MboII	GAAGA	3 cut(s)	152, 178, 489
MfeI	CAATTG	1 cut(s)	218
MluCI	AATT	3 cut(s)	218, 238, 326
MnlI	CCTC	3 cut(s)	254, 405, 446
MroXI	GAANNNNTTC	1 cut(s)	447
MseI	TTAA	2 cut(s)	348, 529
MspI	CCGG	2 cut(s)	243, 253
MspR9I	CCNGG	2 cut(s)	186, 317
MunI	CAATTG	1 cut(s)	218
MvaI	CCWGG	2 cut(s)	186, 317
MwoI	GCNNNNNNNGC	1 cut(s)	317
NdeII	GATC	3 cut(s)	22, 33, 404
NlaIII	CATG	2 cut(s)	79, 493
NlaIV	GGNNCC	3 cut(s)	123, 225, 286
NmuCI	GTSAC	1 cut(s)	248
PdmI	GAANNNNTTC	1 cut(s)	447
PfeI	GAWTC	1 cut(s)	169
PflMI	CCANNNNNTGG	1 cut(s)	294
PinAI	ACCGGT	1 cut(s)	252
Psp6I	CCWGG	2 cut(s)	184, 315
PspGI	CCWGG	2 cut(s)	184, 315
PspN4I	GGNNCC	3 cut(s)	123, 225, 286
PspPI	GGNCC	1 cut(s)	285
RsaI	GTAC	1 cut(s)	88
RsaNI	GTAC	1 cut(s)	87
SaqAI	TTAA	2 cut(s)	348, 529
Sau3AI	GATC	3 cut(s)	22, 33, 404
Sau96I	GGNCC	1 cut(s)	285
ScrFI	CCNGG	2 cut(s)	186, 317
SetI	ASST	6 cut(s)	102, 127, 265, 382, 448, 529
SfcI	CTRYAG	1 cut(s)	513
SinI	GGWCC	1 cut(s)	285
SmlI	CTYRAG	1 cut(s)	419
SmoI	CTYRAG	1 cut(s)	419
Sse9I	AATT	3 cut(s)	218, 238, 326
SspMI	CTAG	1 cut(s)	483
StyD4I	CCNGG	2 cut(s)	184, 315
TasI	AATT	3 cut(s)	218, 238, 326
TfiI	GAWTC	1 cut(s)	169
Tru1I	TTAA	2 cut(s)	348, 529
Tru9I	TTAA	2 cut(s)	348, 529
TscAI	CASTG	1 cut(s)	253
TseFI	GTSAC	1 cut(s)	248
Tsp45I	GTSAC	1 cut(s)	248
TspDTI	ATGAA	1 cut(s)	64
TspRI	CASTG	1 cut(s)	253
Van91I	CCANNNNNTGG	1 cut(s)	294
VpaK11BI	GGWCC	1 cut(s)	285
XagI	CCTNNNNNAGG	1 cut(s)	189
XapI	RAATTY	1 cut(s)	238
XmnI	GAANNNNTTC	1 cut(s)	447
XspI	CTAG	1 cut(s)	483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.