pycom13g16790

N-acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0002623
Physical Location & Seq
Forward (+)
12541498 .. 12542456
959 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g16790.2

Sequence Viewer

Length: 882 bp
ATGTTCAACACATTAAGCAATCAAAGATCGAAGGGAAGCAGAGCATCCATTTGTGAATCCCTTTTTTTTTTTCCTGAGTTTTTTTATTCCCATGGAAACTTCCTAGTGGTGCCTTGCCAGTTGGTCAAACAAGGCGGCCAAATGCTCCCATACTATTTGTGGAACCCATTTGGACCCAACTCAATTATAATTCAACCTTCTAGGCAAGTTCTTGTGCCTTCACTTTTCGCGCATATATATATAAACTTCAAAGGCCGTTACAACTTCAAACAATGGTATATTTTCATATATTCAAAAGTGAAAATATTGAGAATCGTTCATATGGTGGGAAGTTCTGCTATGTCAAATGGAAGAGAACGCAGCGAGATTGACTTGTCCAAGATCACCCTGAGGCCGTTGGATCTCGATGATATTGATGATTTCATGGTGTGGGCCACAGATGAGAAAGTCCCAGTTTTCTGCACTTGGGAACCTTATGCTTCCAAAGAAGAGGGCCTAAACTACATCAAGGATGTTGTCATCCCACACCCTTGGTTAAGGGCAATCTGCCTTGATAACATGCCAATCGGTTCCATTTCTGTGACCCCTTTCTCGGGCAATGATCGGTGCAGAGGTGAACTTGGATACGTTTTGGGGTCCAAGTACTGGGGCAAGGGAATTGCAACCCAGGCTGTGAAATTGGTGGCTGATGCTATATTCAAAGAGTGGCCACATTTGGATAGACTTGAAGCTCTTGTTGACGTGGACAACGTGGGATCACAGAGGGTGCTTGAGAAGGTAGGGTTTCAGAGAGAAGGTGTGTTGAGAAAGTATTTTATCTTGAAAGGAAGAAGTAGGGACATGGTGATTTTCAGTCTTCTTTCTACAGATTGGCAAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_3

Protein Analysis

294

Amino Acids

33.72

Weight (kDa)

8.85

Isoelectric Point (pI)

28.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 188
AccB1I GGYRCC 1 cut(s) 109
AccB7I CCANNNNNTGG 1 cut(s) 645
AccII CGCG 1 cut(s) 230
AciI CCGC 1 cut(s) 135
AclWI GGATC 2 cut(s) 408, 763
AcoI YGGCCR 2 cut(s) 136, 707
AfaI GTAC 1 cut(s) 644
AfiI CCNNNNNNNGG 3 cut(s) 592, 593, 645
AgsI TTSAA 8 cut(s) 7, 194, 250, 268, 294, 700, 728, 823
AjiI CACGTC 1 cut(s) 742
AjnI CCWGG 1 cut(s) 666
AluBI AGCT 1 cut(s) 731
AluI AGCT 1 cut(s) 731
AlwI GGATC 2 cut(s) 408, 763
Ama87I CYCGRG 1 cut(s) 592
AoxI GGCC 6 cut(s) 136, 253, 392, 432, 493, 707
ApeKI GCWGC 1 cut(s) 360
AspLEI GCGC 1 cut(s) 232
AspS9I GGNCC 4 cut(s) 173, 432, 493, 636
AsuHPI GGTGA 3 cut(s) 376, 626, 856
AvaI CYCGRG 1 cut(s) 592
AvaII GGWCC 2 cut(s) 173, 636
AxyI CCTNAGG 1 cut(s) 389
BalI TGGCCA 1 cut(s) 709
BanI GGYRCC 1 cut(s) 109
BbsI GAAGAC 1 cut(s) 848
BbvI GCAGC 1 cut(s) 372
BceAI ACGGC 2 cut(s) 240, 379
BciT130I CCWGG 1 cut(s) 668
BciVI GTATCC 1 cut(s) 617
BfaI CTAG 2 cut(s) 104, 201
BfmI CTRYAG 1 cut(s) 864
BfuI GTATCC 1 cut(s) 617
BisI GCNGC 2 cut(s) 136, 361
BlsI GCNGC 2 cut(s) 137, 362
BmcAI AGTACT 1 cut(s) 644
Bme1390I CCNGG 1 cut(s) 668
Bme18I GGWCC 2 cut(s) 173, 636
BmeT110I CYCGRG 1 cut(s) 592
BmgBI CACGTC 1 cut(s) 742
BmgT120I GGNCC 4 cut(s) 173, 432, 493, 636
BmiI GGNNCC 6 cut(s) 111, 164, 175, 471, 571, 637
BmrFI CCNGG 1 cut(s) 668
BmrI ACTGGG 2 cut(s) 446, 655
BmsI GCATC 2 cut(s) 53, 679
BmuI ACTGGG 2 cut(s) 446, 655
BpiI GAAGAC 1 cut(s) 848
BpuEI CTTGAG 1 cut(s) 791
BsaJI CCNNGG 3 cut(s) 91, 530, 666
Bsc4I CCNNNNNNNGG 3 cut(s) 592, 593, 645
Bse1I ACTGG 3 cut(s) 118, 452, 650
Bse21I CCTNAGG 1 cut(s) 389
Bse3DI GCAATG 1 cut(s) 604
BseBI CCWGG 1 cut(s) 668
BseDI CCNNGG 3 cut(s) 91, 530, 666
BseGI GGATG 3 cut(s) 44, 517, 519
BseLI CCNNNNNNNGG 3 cut(s) 592, 593, 645
BseMI GCAATG 1 cut(s) 604
BseMII CTCAG 2 cut(s) 66, 380
BseNI ACTGG 3 cut(s) 118, 452, 650
BseXI GCAGC 1 cut(s) 372
BsgI GTGCAG 2 cut(s) 445, 628
Bsh1236I CGCG 1 cut(s) 230
BshFI GGCC 6 cut(s) 138, 255, 394, 434, 495, 709
BshNI GGYRCC 1 cut(s) 109
BsiHKCI CYCGRG 1 cut(s) 592
BslFI GGGAC 2 cut(s) 434, 851
BslI CCNNNNNNNGG 3 cut(s) 592, 593, 645
BsmFI GGGAC 2 cut(s) 434, 851
BsnI GGCC 6 cut(s) 138, 255, 394, 434, 495, 709
BsoBI CYCGRG 1 cut(s) 592
Bsp143I GATC 5 cut(s) 26, 381, 400, 601, 755
Bsp19I CCATGG 1 cut(s) 91
BspACI CCGC 1 cut(s) 135
BspANI GGCC 6 cut(s) 138, 255, 394, 434, 495, 709
BspCNI CTCAG 2 cut(s) 67, 381
BspFNI CGCG 1 cut(s) 230
BspLI GGNNCC 6 cut(s) 111, 164, 175, 471, 571, 637
BspPI GGATC 2 cut(s) 408, 763
BspT107I GGYRCC 1 cut(s) 109
BsrDI GCAATG 1 cut(s) 604
BsrI ACTGG 3 cut(s) 118, 452, 650
BssECI CCNNGG 3 cut(s) 91, 530, 666
BssMI GATC 5 cut(s) 26, 381, 400, 601, 755
BssT1I CCWWGG 2 cut(s) 91, 530
Bst2UI CCWGG 1 cut(s) 668
Bst6I CTCTTC 2 cut(s) 346, 483
BstDEI CTNAG 2 cut(s) 75, 389
BstDSI CCRYGG 1 cut(s) 91
BstF5I GGATG 3 cut(s) 44, 517, 519
BstFNI CGCG 1 cut(s) 230
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 5 cut(s) 29, 384, 403, 604, 758
BstMBI GATC 5 cut(s) 26, 381, 400, 601, 755
BstMWI GCNNNNNNNGC 1 cut(s) 668
BstNI CCWGG 1 cut(s) 668
BstNSI RCATGY 1 cut(s) 562
BstSCI CCNGG 1 cut(s) 666
BstSFI CTRYAG 1 cut(s) 864
BstUI CGCG 1 cut(s) 230
BstV1I GCAGC 1 cut(s) 372
BstV2I GAAGAC 1 cut(s) 848
BstX2I RGATCY 1 cut(s) 400
BstXI CCANNNNNNTGG 1 cut(s) 531
BstYI RGATCY 1 cut(s) 400
Bsu36I CCTNAGG 1 cut(s) 389
BsuI GTATCC 1 cut(s) 617
BsuRI GGCC 6 cut(s) 138, 255, 394, 434, 495, 709
BtgI CCRYGG 1 cut(s) 91
BtrI CACGTC 1 cut(s) 742
BtsCI GGATG 3 cut(s) 44, 517, 519
CfoI GCGC 1 cut(s) 232
Cfr13I GGNCC 4 cut(s) 173, 432, 493, 636
Csp6I GTAC 1 cut(s) 643
CviAII CATG 4 cut(s) 92, 424, 559, 841
CviJI RGCY 9 cut(s) 138, 255, 394, 434, 495, 671, 686, 709, 731
CviKI_1 RGCY 9 cut(s) 138, 255, 394, 434, 495, 671, 686, 709, 731
CviQI GTAC 1 cut(s) 643
DdeI CTNAG 2 cut(s) 75, 389
DpnI GATC 5 cut(s) 28, 383, 402, 603, 757
DpnII GATC 5 cut(s) 26, 381, 400, 601, 755
EaeI YGGCCR 2 cut(s) 136, 707
Eam1104I CTCTTC 2 cut(s) 346, 483
EarI CTCTTC 2 cut(s) 346, 483
Eco130I CCWWGG 2 cut(s) 91, 530
Eco47I GGWCC 2 cut(s) 173, 636
Eco81I CCTNAGG 1 cut(s) 389
Eco88I CYCGRG 1 cut(s) 592
EcoO109I RGGNCCY 1 cut(s) 493
EcoRII CCWGG 1 cut(s) 666
EcoT14I CCWWGG 2 cut(s) 91, 530
ErhI CCWWGG 2 cut(s) 91, 530
FaeI CATG 4 cut(s) 95, 427, 562, 844
FaqI GGGAC 2 cut(s) 434, 851
FatI CATG 4 cut(s) 91, 423, 558, 840
FauNDI CATATG 1 cut(s) 321
Fnu4HI GCNGC 2 cut(s) 136, 361
FokI GGATG 3 cut(s) 31, 506, 524
Fsp4HI GCNGC 2 cut(s) 136, 361
FspBI CTAG 2 cut(s) 104, 201
GlaI GCGC 1 cut(s) 231
GluI GCNGC 2 cut(s) 136, 361
HaeIII GGCC 6 cut(s) 138, 255, 394, 434, 495, 709
HhaI GCGC 1 cut(s) 232
Hin1II CATG 4 cut(s) 95, 427, 562, 844
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HincII GTYRAC 1 cut(s) 739
HindII GTYRAC 1 cut(s) 739
HinfI GANTC 2 cut(s) 56, 312
HphI GGTGA 3 cut(s) 376, 626, 856
Hpy166II GTNNAC 3 cut(s) 617, 739, 745
Hpy188I TCNGA 1 cut(s) 789
Hpy188III TCNNGA 3 cut(s) 74, 404, 820
Hpy8I GTNNAC 3 cut(s) 617, 739, 745
HpyAV CCTTC 5 cut(s) 25, 207, 228, 769, 788
HpyCH4IV ACGT 3 cut(s) 627, 741, 750
HpyCH4V TGCA 3 cut(s) 462, 609, 662
HpyF10VI GCNNNNNNNGC 1 cut(s) 668
HpyF3I CTNAG 2 cut(s) 75, 389
HpySE526I ACGT 3 cut(s) 627, 741, 750
Hsp92II CATG 4 cut(s) 95, 427, 562, 844
HspAI GCGC 1 cut(s) 230
Kzo9I GATC 5 cut(s) 26, 381, 400, 601, 755
LmnI GCTCC 1 cut(s) 150
LpnPI CCDG 7 cut(s) 87, 131, 401, 465, 631, 653, 680
Lsp1109I GCAGC 1 cut(s) 372
LweI GCATC 2 cut(s) 53, 679
MaeI CTAG 2 cut(s) 104, 201
MaeII ACGT 3 cut(s) 627, 741, 750
MaeIII GTNAC 2 cut(s) 257, 580
MalI GATC 5 cut(s) 28, 383, 402, 603, 757
MboI GATC 5 cut(s) 26, 381, 400, 601, 755
MboII GAAGA 4 cut(s) 363, 500, 840, 848
MflI RGATCY 1 cut(s) 400
MlsI TGGCCA 1 cut(s) 709
MluCI AATT 4 cut(s) 183, 189, 657, 677
MluNI TGGCCA 1 cut(s) 709
MmeI TCCRAC 1 cut(s) 378
MnlI CCTC 4 cut(s) 384, 484, 605, 756
Mox20I TGGCCA 1 cut(s) 709
MscI TGGCCA 1 cut(s) 709
MseI TTAA 2 cut(s) 14, 536
MslI CAYNNNNRTG 1 cut(s) 578
Msp20I TGGCCA 1 cut(s) 709
MspR9I CCNGG 1 cut(s) 668
MvaI CCWGG 1 cut(s) 668
MvnI CGCG 1 cut(s) 230
MwoI GCNNNNNNNGC 1 cut(s) 668
NcoI CCATGG 1 cut(s) 91
NdeI CATATG 1 cut(s) 321
NdeII GATC 5 cut(s) 26, 381, 400, 601, 755
NlaIII CATG 4 cut(s) 95, 427, 562, 844
NlaIV GGNNCC 6 cut(s) 111, 164, 175, 471, 571, 637
NmuCI GTSAC 1 cut(s) 580
NspI RCATGY 1 cut(s) 562
PcsI WCGNNNNNNNCGW 1 cut(s) 747
PfeI GAWTC 2 cut(s) 56, 312
PflMI CCANNNNNTGG 1 cut(s) 645
PkrI GCNGC 2 cut(s) 137, 362
PsiI TTATAA 1 cut(s) 188
Psp6I CCWGG 1 cut(s) 666
PspGI CCWGG 1 cut(s) 666
PspN4I GGNNCC 6 cut(s) 111, 164, 175, 471, 571, 637
PspPI GGNCC 4 cut(s) 173, 432, 493, 636
PsuI RGATCY 1 cut(s) 400
RsaI GTAC 1 cut(s) 644
RsaNI GTAC 1 cut(s) 643
RseI CAYNNNNRTG 1 cut(s) 578
SaqAI TTAA 2 cut(s) 14, 536
SatI GCNGC 2 cut(s) 136, 361
Sau3AI GATC 5 cut(s) 26, 381, 400, 601, 755
Sau96I GGNCC 4 cut(s) 173, 432, 493, 636
ScaI AGTACT 1 cut(s) 644
ScrFI CCNGG 1 cut(s) 668
SetI ASST 9 cut(s) 199, 475, 616, 630, 733, 744, 753, 780, 799
SfaNI GCATC 2 cut(s) 53, 679
SfcI CTRYAG 1 cut(s) 864
SinI GGWCC 2 cut(s) 173, 636
SmiMI CAYNNNNRTG 1 cut(s) 578
SmlI CTYRAG 1 cut(s) 770
SmoI CTYRAG 1 cut(s) 770
Sse9I AATT 4 cut(s) 183, 189, 657, 677
SsiI CCGC 1 cut(s) 135
SspI AATATT 1 cut(s) 306
SspMI CTAG 2 cut(s) 104, 201
StyD4I CCNGG 1 cut(s) 666
StyI CCWWGG 2 cut(s) 91, 530
TaiI ACGT 3 cut(s) 630, 744, 753
TaqI TCGA 2 cut(s) 29, 405
TasI AATT 4 cut(s) 183, 189, 657, 677
TatI WGTACW 1 cut(s) 642
TauI GCSGC 1 cut(s) 138
TfiI GAWTC 2 cut(s) 56, 312
Tru1I TTAA 2 cut(s) 14, 536
Tru9I TTAA 2 cut(s) 14, 536
TseFI GTSAC 1 cut(s) 580
TseI GCWGC 1 cut(s) 360
Tsp45I GTSAC 1 cut(s) 580
TspDTI ATGAA 3 cut(s) 274, 308, 412
Van91I CCANNNNNTGG 1 cut(s) 645
VpaK11BI GGWCC 2 cut(s) 173, 636
XceI RCATGY 1 cut(s) 562
XcmI CCANNNNNNNNNTGG 1 cut(s) 156
XspI CTAG 2 cut(s) 104, 201
ZrmI AGTACT 1 cut(s) 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.