Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002623

Physical Location & Seq

Genomic Coordinates Forward (+)

1177720 .. 1179272

Gene Structure 1553 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G016600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 504 bp

ATGATCACACTTAGGCCCTTGGAGCTTTCTGACATTGATGATTTCATGGTGTGGGCTACAGATGAGAAAGTGCCTCGTTTCTGCACTTGGGAACCTTATGCTAGCAAAGAAGAAGGCCTAAACTTCATCAAAAATGTTGTTCTTCCCCACCCCTGGTTCATGGCAATCTGCCTTGAAAACAGGCCTATTGGTGCCATTTCGGTGACCTCGAATTCGGGCACCAGTCGGTGCAGAGGAGAACTTGGCTATGTTTTAGGGTCCAGGTACTGGGGCAAGGGGATTGTAACACAGGCTGTGAAATTGGTGGCTGATATTATATTCAAAGAGTGGACACATTTGGAGAGGCTTGTAGCTCTTGTTGATGTGGAAAATGTGGCATCTCAGAGGGTGCTTGAGAAGGCAGGGTTTCAGAGGGAAGGTGTTCTGAGGAAGTACTTTATTTTGAAGGGAAGAAGTAGGGATATGGTGATGTTCGGCCTTCTTTCTACAGATTGGCAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_3

Protein Analysis

168

Amino Acids

19.11

Weight (kDa)

7.7

Isoelectric Point (pI)

15.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002623)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32020 AT2G32030
fragaria_vesca	FvH4_4g16130 FvH4_4g16140 FvH4_4g26600
malus_domestica	MD13G1195600.v1.1 MD16G1196400.v1.1 MD16G1196500.v1.1
prunus_persica	Prupe.1G016600_v2.0.a1 Prupe.1G016700_v2.0.a1
pyrus_communis	pycom13g16790
rosa_chinensis	RchiOBHm_Chr4g0415651 RchiOBHm_Chr4g0415661 RchiOBHm_Chr4g0415691
rosa_laevigata	RLG00000008050 RLG00000008051 RLG00000008052
rosa_multiflora	Rmu_co8195074.1_g000001 Rmu_sc0004536.1_g000001 Rmu_sc0004536.1_g000002 Rmu_sc0004540.1_g000030
rosa_roxburghii	Rroxscaffold_5G00355360 Rroxscaffold_5G00355390 Rroxscaffold_5G00359480 Rroxscaffold_5G00359500
rosa_rugosa	Rorug04G0113500 Rorug04G0113500 Rorug04G0136100 Rorug04G0136200
rosa_samantha	Rh4AG197000 Rh4AG197100 Rh4BG195500 Rh4BG195600 Rh4CG207700 Rh4CG207900 Rh4CG208200 Rh4DG194800 Rh4DG194900
rosa_wichuraiana	Rw4G016750 Rw4G016760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	191, 218
AccB7I	CCANNNNNTGG	1 cut(s)	267
AcsI	RAATTY	1 cut(s)	211
AfaI	GTAC	2 cut(s)	266, 434
AfiI	CCNNNNNNNGG	2 cut(s)	153, 267
AgsI	TTSAA	3 cut(s)	176, 322, 445
AjnI	CCWGG	2 cut(s)	152, 260
AluBI	AGCT	2 cut(s)	25, 353
AluI	AGCT	2 cut(s)	25, 353
AlwNI	CAGNNNCTG	1 cut(s)	267
AoxI	GGCC	4 cut(s)	14, 115, 182, 475
ApoI	RAATTY	1 cut(s)	211
ArsI	GACNNNNNNTTYG	2 cut(s)	196, 228
Asp700I	GAANNNNTTC	1 cut(s)	420
AspS9I	GGNCC	2 cut(s)	15, 258
AsuHPI	GGTGA	2 cut(s)	214, 478
AsuNHI	GCTAGC	1 cut(s)	101
AvaII	GGWCC	1 cut(s)	258
BaeGI	GKGCMC	1 cut(s)	221
BanI	GGYRCC	2 cut(s)	191, 218
BciT130I	CCWGG	2 cut(s)	154, 262
BclI	TGATCA	1 cut(s)	3
BfaI	CTAG	1 cut(s)	102
BfmI	CTRYAG	2 cut(s)	57, 486
BmcAI	AGTACT	1 cut(s)	434
Bme1390I	CCNGG	2 cut(s)	154, 262
Bme18I	GGWCC	1 cut(s)	258
BmgT120I	GGNCC	2 cut(s)	15, 258
BmiI	GGNNCC	4 cut(s)	93, 193, 220, 259
BmrFI	CCNGG	2 cut(s)	154, 262
BmrI	ACTGGG	1 cut(s)	277
BmsI	GCATC	1 cut(s)	386
BmtI	GCTAGC	1 cut(s)	105
BmuI	ACTGGG	1 cut(s)	277
BpuEI	CTTGAG	1 cut(s)	413
BsaJI	CCNNGG	2 cut(s)	18, 152
Bsc4I	CCNNNNNNNGG	2 cut(s)	153, 267
Bse1I	ACTGG	2 cut(s)	222, 272
BseBI	CCWGG	2 cut(s)	154, 262
BseDI	CCNNGG	2 cut(s)	18, 152
BseLI	CCNNNNNNNGG	2 cut(s)	153, 267
BseMII	CTCAG	2 cut(s)	395, 416
BseNI	ACTGG	2 cut(s)	222, 272
BseRI	GAGGAG	1 cut(s)	249
BseSI	GKGCMC	1 cut(s)	221
BsgI	GTGCAG	2 cut(s)	67, 250
BshFI	GGCC	4 cut(s)	16, 117, 184, 477
BshNI	GGYRCC	2 cut(s)	191, 218
BslI	CCNNNNNNNGG	2 cut(s)	153, 267
BsnI	GGCC	4 cut(s)	16, 117, 184, 477
Bsp1286I	GDGCHC	1 cut(s)	221
Bsp143I	GATC	1 cut(s)	3
BspANI	GGCC	4 cut(s)	16, 117, 184, 477
BspCNI	CTCAG	2 cut(s)	394, 417
BspLI	GGNNCC	4 cut(s)	93, 193, 220, 259
BspOI	GCTAGC	1 cut(s)	105
BspT107I	GGYRCC	2 cut(s)	191, 218
BsrI	ACTGG	2 cut(s)	222, 272
BssECI	CCNNGG	2 cut(s)	18, 152
BssMI	GATC	1 cut(s)	3
BssT1I	CCWWGG	1 cut(s)	18
Bst2UI	CCWGG	2 cut(s)	154, 262
BstC8I	GCNNGC	1 cut(s)	103
BstDEI	CTNAG	3 cut(s)	11, 381, 425
BstEII	GGTNACC	1 cut(s)	202
BstKTI	GATC	1 cut(s)	6
BstMBI	GATC	1 cut(s)	3
BstMWI	GCNNNNNNNGC	1 cut(s)	22
BstNI	CCWGG	2 cut(s)	154, 262
BstPI	GGTNACC	1 cut(s)	202
BstSCI	CCNGG	2 cut(s)	152, 260
BstSFI	CTRYAG	2 cut(s)	57, 486
BstSLI	GKGCMC	1 cut(s)	221
BsuRI	GGCC	4 cut(s)	16, 117, 184, 477
Cac8I	GCNNGC	1 cut(s)	103
CaiI	CAGNNNCTG	1 cut(s)	267
Cfr13I	GGNCC	2 cut(s)	15, 258
Csp6I	GTAC	2 cut(s)	265, 433
CviAII	CATG	2 cut(s)	46, 160
CviQI	GTAC	2 cut(s)	265, 433
DdeI	CTNAG	3 cut(s)	11, 381, 425
DpnI	GATC	1 cut(s)	5
DpnII	GATC	1 cut(s)	3
Eco130I	CCWWGG	1 cut(s)	18
Eco147I	AGGCCT	2 cut(s)	117, 184
Eco47I	GGWCC	1 cut(s)	258
Eco91I	GGTNACC	1 cut(s)	202
EcoO109I	RGGNCCY	1 cut(s)	15
EcoO65I	GGTNACC	1 cut(s)	202
EcoRI	GAATTC	1 cut(s)	211
EcoRII	CCWGG	2 cut(s)	152, 260
EcoT14I	CCWWGG	1 cut(s)	18
ErhI	CCWWGG	1 cut(s)	18
FaeI	CATG	2 cut(s)	49, 163
FaiI	YATR	6 cut(s)	47, 99, 161, 249, 317, 464
FatI	CATG	2 cut(s)	45, 159
FbaI	TGATCA	1 cut(s)	3
FspBI	CTAG	1 cut(s)	102
HaeIII	GGCC	4 cut(s)	16, 117, 184, 477
Hin1II	CATG	2 cut(s)	49, 163
HphI	GGTGA	2 cut(s)	214, 478
Hpy166II	GTNNAC	1 cut(s)	330
Hpy188I	TCNGA	4 cut(s)	31, 384, 411, 426
Hpy8I	GTNNAC	1 cut(s)	330
HpyAV	CCTTC	5 cut(s)	107, 391, 410, 439, 488
HpyCH4V	TGCA	2 cut(s)	84, 231
HpyF10VI	GCNNNNNNNGC	1 cut(s)	22
HpyF3I	CTNAG	3 cut(s)	11, 381, 425
Hsp92II	CATG	2 cut(s)	49, 163
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	1 cut(s)	3
LmnI	GCTCC	1 cut(s)	22
LpnPI	CCDG	9 cut(s)	139, 166, 166, 235, 247, 253, 274, 275, 387
LweI	GCATC	1 cut(s)	386
MaeI	CTAG	1 cut(s)	102
MaeIII	GTNAC	2 cut(s)	202, 283
MalI	GATC	1 cut(s)	5
MboI	GATC	1 cut(s)	3
MboII	GAAGA	3 cut(s)	122, 134, 462
MhlI	GDGCHC	1 cut(s)	221
MluCI	AATT	2 cut(s)	211, 299
MnlI	CCTC	7 cut(s)	84, 217, 227, 336, 378, 405, 420
MroXI	GAANNNNTTC	1 cut(s)	420
MslI	CAYNNNNRTG	1 cut(s)	200
MspR9I	CCNGG	2 cut(s)	154, 262
MvaI	CCWGG	2 cut(s)	154, 262
MwoI	GCNNNNNNNGC	1 cut(s)	22
NdeII	GATC	1 cut(s)	3
NheI	GCTAGC	1 cut(s)	101
NlaIII	CATG	2 cut(s)	49, 163
NlaIV	GGNNCC	4 cut(s)	93, 193, 220, 259
NmuCI	GTSAC	1 cut(s)	202
PceI	AGGCCT	2 cut(s)	117, 184
PcsI	WCGNNNNNNNCGW	1 cut(s)	206
PdmI	GAANNNNTTC	1 cut(s)	420
PflMI	CCANNNNNTGG	1 cut(s)	267
Psp6I	CCWGG	2 cut(s)	152, 260
PspEI	GGTNACC	1 cut(s)	202
PspGI	CCWGG	2 cut(s)	152, 260
PspN4I	GGNNCC	4 cut(s)	93, 193, 220, 259
PspPI	GGNCC	2 cut(s)	15, 258
PstNI	CAGNNNCTG	1 cut(s)	267
RsaI	GTAC	2 cut(s)	266, 434
RsaNI	GTAC	2 cut(s)	265, 433
RseI	CAYNNNNRTG	1 cut(s)	200
Sau3AI	GATC	1 cut(s)	3
Sau96I	GGNCC	2 cut(s)	15, 258
ScaI	AGTACT	1 cut(s)	434
ScrFI	CCNGG	2 cut(s)	154, 262
SduI	GDGCHC	1 cut(s)	221
SetI	ASST	6 cut(s)	27, 97, 209, 266, 355, 421
SfaNI	GCATC	1 cut(s)	386
SfcI	CTRYAG	2 cut(s)	57, 486
SinI	GGWCC	1 cut(s)	258
SmiMI	CAYNNNNRTG	1 cut(s)	200
SmlI	CTYRAG	1 cut(s)	392
SmoI	CTYRAG	1 cut(s)	392
Sse9I	AATT	2 cut(s)	211, 299
SseBI	AGGCCT	2 cut(s)	117, 184
SspMI	CTAG	1 cut(s)	102
StuI	AGGCCT	2 cut(s)	117, 184
StyD4I	CCNGG	2 cut(s)	152, 260
StyI	CCWWGG	1 cut(s)	18
TaqI	TCGA	1 cut(s)	209
TasI	AATT	2 cut(s)	211, 299
TatI	WGTACW	1 cut(s)	432
TseFI	GTSAC	1 cut(s)	202
Tsp45I	GTSAC	1 cut(s)	202
TspDTI	ATGAA	3 cut(s)	34, 115, 148
Van91I	CCANNNNNTGG	1 cut(s)	267
VpaK11BI	GGWCC	1 cut(s)	258
XapI	RAATTY	1 cut(s)	211
XmnI	GAANNNNTTC	1 cut(s)	420
XspI	CTAG	1 cut(s)	102
ZrmI	AGTACT	1 cut(s)	434

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.