Rmu_co8195074.1_g000001

N-acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8195074.1
OG0002623
Physical Location & Seq
Forward (+)
1 .. 704
704 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8195074.1_g000001.1.cds

Sequence Viewer

Length: 507 bp
gaatggagggaaattctgggatatcaaatggaagagaaggcggtgatgaggtctttaccataaccctcaggcctttgggtctttctgacattgatgatttcatggtttggggcacagatgagaaagtgtctcgtttctgcacttgggagccttatgctagcaaagaagaggggctcaactacatcaaggataagatccttccacacccctggtatagggcaatatgtctggacggcaggccggttggtgccattctagtgaccccgaattcgggaaatgatcggtgtagagctgaaatcggctatgtcttggggtccaagtactggggcaaagggatagctacaagggcagtgaagatggtggttgatactattttcaaggagtggacacatttggagagactggaagctttcgttgatgtggagaatgtgggatcacagagggtgatggagaaggctgggtttcaaagggaaggcgttttgagaaagaattatattgtgaaaggta
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_3

Protein Analysis

168

Amino Acids

18.93

Weight (kDa)

6.16

Isoelectric Point (pI)

12.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 247
AccB7I CCANNNNNTGG 1 cut(s) 323
AciI CCGC 1 cut(s) 41
AclWI GGATC 2 cut(s) 189, 441
AcsI RAATTY 2 cut(s) 12, 267
AfaI GTAC 1 cut(s) 322
AfiI CCNNNNNNNGG 4 cut(s) 215, 270, 271, 323
AgsI TTSAA 2 cut(s) 378, 466
AjnI CCWGG 1 cut(s) 208
AluBI AGCT 3 cut(s) 292, 340, 409
AluI AGCT 3 cut(s) 292, 340, 409
Alw26I GTCTC 2 cut(s) 134, 393
AlwI GGATC 2 cut(s) 189, 441
AoxI GGCC 2 cut(s) 70, 238
ApoI RAATTY 2 cut(s) 12, 267
ArsI GACNNNNNNTTYG 2 cut(s) 252, 284
AspS9I GGNCC 1 cut(s) 314
AsuHPI GGTGA 2 cut(s) 55, 456
AsuNHI GCTAGC 1 cut(s) 157
AvaII GGWCC 1 cut(s) 314
AxyI CCTNAGG 1 cut(s) 67
BaeGI GKGCMC 1 cut(s) 115
BanI GGYRCC 1 cut(s) 247
BanII GRGCYC 1 cut(s) 176
BccI CCATC 2 cut(s) 351, 441
BceAI ACGGC 1 cut(s) 249
BciT130I CCWGG 1 cut(s) 210
BcoDI GTCTC 2 cut(s) 134, 393
BfaI CTAG 2 cut(s) 158, 256
BmcAI AGTACT 1 cut(s) 322
Bme1390I CCNGG 1 cut(s) 210
Bme18I GGWCC 1 cut(s) 314
BmgT120I GGNCC 1 cut(s) 314
BmiI GGNNCC 3 cut(s) 149, 249, 315
BmrFI CCNGG 1 cut(s) 210
BmrI ACTGGG 1 cut(s) 333
BmtI GCTAGC 1 cut(s) 161
BmuI ACTGGG 1 cut(s) 333
BsaJI CCNNGG 1 cut(s) 208
Bsc4I CCNNNNNNNGG 4 cut(s) 215, 270, 271, 323
Bse118I RCCGGY 1 cut(s) 240
Bse1I ACTGG 2 cut(s) 328, 407
Bse21I CCTNAGG 1 cut(s) 67
BseBI CCWGG 1 cut(s) 210
BseDI CCNNGG 1 cut(s) 208
BseLI CCNNNNNNNGG 4 cut(s) 215, 270, 271, 323
BseMII CTCAG 1 cut(s) 81
BseNI ACTGG 2 cut(s) 328, 407
BseSI GKGCMC 1 cut(s) 115
BseYI CCCAGC 1 cut(s) 457
BsgI GTGCAG 1 cut(s) 123
BshFI GGCC 2 cut(s) 72, 240
BshNI GGYRCC 1 cut(s) 247
BsiSI CCGG 1 cut(s) 241
BslI CCNNNNNNNGG 4 cut(s) 215, 270, 271, 323
BsmAI GTCTC 2 cut(s) 134, 393
BsnI GGCC 2 cut(s) 72, 240
Bsp1286I GDGCHC 2 cut(s) 115, 176
Bsp143I GATC 3 cut(s) 194, 279, 433
BspACI CCGC 1 cut(s) 41
BspANI GGCC 2 cut(s) 72, 240
BspCNI CTCAG 1 cut(s) 80
BspLI GGNNCC 3 cut(s) 149, 249, 315
BspOI GCTAGC 1 cut(s) 161
BspPI GGATC 2 cut(s) 189, 441
BspT107I GGYRCC 1 cut(s) 247
BsrFI RCCGGY 1 cut(s) 240
BsrI ACTGG 2 cut(s) 328, 407
BssAI RCCGGY 1 cut(s) 240
BssECI CCNNGG 1 cut(s) 208
BssMI GATC 3 cut(s) 194, 279, 433
Bst2UI CCWGG 1 cut(s) 210
Bst6I CTCTTC 2 cut(s) 27, 161
BstC8I GCNNGC 2 cut(s) 159, 238
BstDEI CTNAG 1 cut(s) 67
BstENI CCTNNNNNAGG 1 cut(s) 213
BstKTI GATC 3 cut(s) 197, 282, 436
BstMAI GTCTC 2 cut(s) 134, 393
BstMBI GATC 3 cut(s) 194, 279, 433
BstMWI GCNNNNNNNGC 1 cut(s) 346
BstNI CCWGG 1 cut(s) 210
BstSCI CCNGG 1 cut(s) 208
BstSLI GKGCMC 1 cut(s) 115
BstX2I RGATCY 1 cut(s) 194
BstXI CCANNNNNNTGG 1 cut(s) 209
BstYI RGATCY 1 cut(s) 194
Bsu36I CCTNAGG 1 cut(s) 67
BsuRI GGCC 2 cut(s) 72, 240
BtsI GCAGTG 1 cut(s) 356
BtsIMutI CAGTG 1 cut(s) 356
Cac8I GCNNGC 2 cut(s) 159, 238
Cfr10I RCCGGY 1 cut(s) 240
Cfr13I GGNCC 1 cut(s) 314
Csp6I GTAC 1 cut(s) 321
CviAII CATG 1 cut(s) 102
CviJI RGCY 9 cut(s) 72, 150, 174, 240, 292, 302, 340, 409, 457
CviKI_1 RGCY 9 cut(s) 72, 150, 174, 240, 292, 302, 340, 409, 457
CviQI GTAC 1 cut(s) 321
DdeI CTNAG 1 cut(s) 67
DpnI GATC 3 cut(s) 196, 281, 435
DpnII GATC 3 cut(s) 194, 279, 433
Eam1104I CTCTTC 2 cut(s) 27, 161
EarI CTCTTC 2 cut(s) 27, 161
Eco147I AGGCCT 1 cut(s) 72
Eco24I GRGCYC 1 cut(s) 176
Eco32I GATATC 1 cut(s) 23
Eco47I GGWCC 1 cut(s) 314
Eco81I CCTNAGG 1 cut(s) 67
EcoNI CCTNNNNNAGG 1 cut(s) 213
EcoRI GAATTC 1 cut(s) 267
EcoRII CCWGG 1 cut(s) 208
EcoRV GATATC 1 cut(s) 23
EcoT38I GRGCYC 1 cut(s) 176
FaeI CATG 1 cut(s) 105
FaiI YATR 7 cut(s) 61, 103, 155, 215, 225, 305, 494
FatI CATG 1 cut(s) 101
FriOI GRGCYC 1 cut(s) 176
FspBI CTAG 2 cut(s) 158, 256
GsaI CCCAGC 1 cut(s) 461
HaeIII GGCC 2 cut(s) 72, 240
HapII CCGG 1 cut(s) 241
Hin1II CATG 1 cut(s) 105
HindIII AAGCTT 1 cut(s) 407
HpaII CCGG 1 cut(s) 241
HphI GGTGA 2 cut(s) 55, 456
Hpy166II GTNNAC 1 cut(s) 386
Hpy188I TCNGA 1 cut(s) 87
Hpy188III TCNNGA 2 cut(s) 229, 272
Hpy8I GTNNAC 1 cut(s) 386
HpyAV CCTTC 4 cut(s) 31, 208, 447, 466
HpyCH4V TGCA 1 cut(s) 140
HpyF10VI GCNNNNNNNGC 1 cut(s) 346
HpyF3I CTNAG 1 cut(s) 67
Hsp92II CATG 1 cut(s) 105
Kzo9I GATC 3 cut(s) 194, 279, 433
LmnI GCTCC 1 cut(s) 147
MaeI CTAG 2 cut(s) 158, 256
MaeIII GTNAC 1 cut(s) 258
MalI GATC 3 cut(s) 196, 281, 435
MboI GATC 3 cut(s) 194, 279, 433
MboII GAAGA 3 cut(s) 44, 178, 366
MflI RGATCY 1 cut(s) 194
MhlI GDGCHC 2 cut(s) 115, 176
MluCI AATT 3 cut(s) 12, 267, 489
MnlI CCTC 4 cut(s) 42, 76, 162, 434
MslI CAYNNNNRTG 1 cut(s) 256
MspI CCGG 1 cut(s) 241
MspR9I CCNGG 1 cut(s) 210
MvaI CCWGG 1 cut(s) 210
MwoI GCNNNNNNNGC 1 cut(s) 346
NdeII GATC 3 cut(s) 194, 279, 433
NheI GCTAGC 1 cut(s) 157
NlaIII CATG 1 cut(s) 105
NlaIV GGNNCC 3 cut(s) 149, 249, 315
NmuCI GTSAC 1 cut(s) 258
PceI AGGCCT 1 cut(s) 72
PflMI CCANNNNNTGG 1 cut(s) 323
Psp6I CCWGG 1 cut(s) 208
PspFI CCCAGC 1 cut(s) 457
PspGI CCWGG 1 cut(s) 208
PspN4I GGNNCC 3 cut(s) 149, 249, 315
PspPI GGNCC 1 cut(s) 314
PsuI RGATCY 1 cut(s) 194
RsaI GTAC 1 cut(s) 322
RsaNI GTAC 1 cut(s) 321
RseI CAYNNNNRTG 1 cut(s) 256
Sau3AI GATC 3 cut(s) 194, 279, 433
Sau96I GGNCC 1 cut(s) 314
ScaI AGTACT 1 cut(s) 322
ScrFI CCNGG 1 cut(s) 210
SduI GDGCHC 2 cut(s) 115, 176
SetI ASST 5 cut(s) 53, 294, 342, 411, 507
SinI GGWCC 1 cut(s) 314
SmiMI CAYNNNNRTG 1 cut(s) 256
Sse9I AATT 3 cut(s) 12, 267, 489
SseBI AGGCCT 1 cut(s) 72
SsiI CCGC 1 cut(s) 41
SspMI CTAG 2 cut(s) 158, 256
StuI AGGCCT 1 cut(s) 72
StyD4I CCNGG 1 cut(s) 208
TasI AATT 3 cut(s) 12, 267, 489
TatI WGTACW 1 cut(s) 320
TscAI CASTG 1 cut(s) 356
TseFI GTSAC 1 cut(s) 258
Tsp45I GTSAC 1 cut(s) 258
TspDTI ATGAA 1 cut(s) 90
TspRI CASTG 1 cut(s) 356
Van91I CCANNNNNTGG 1 cut(s) 323
VpaK11BI GGWCC 1 cut(s) 314
XagI CCTNNNNNAGG 1 cut(s) 213
XapI RAATTY 2 cut(s) 12, 267
XspI CTAG 2 cut(s) 158, 256
ZrmI AGTACT 1 cut(s) 322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.