Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002731

Physical Location & Seq

Genomic Coordinates Reverse (-)

14144831 .. 14146555

Gene Structure 1725 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G33380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 711 bp

ATGGCAGGAGAGGCAGAGGCTTTGGCCACGACGGCACCGTTAGCTCCGGTCACCAGTCAGCGAAAAGTACGGAACGATTTGGAGGAAACATTACCAAAACCATACATGGCAAGAGCATTAGCAGCTCCAGATACAGAGCATCCGAATGGAACAGAAGGTCACGATAGCAAAGGAATGAGTGTTATGCAACAACATGTTGCTTTCTTCGACCAAAACGACGATGGAATCGTCTATCCTTGGGAGACTTATAAGGGATTTCGTGACCTTGGTTTCAACCCAATTTCCTCTATCTTTTGGACCTTACTCATAAACTTAGCGTTCAGCTACGTTACACTTCCGAGTTGGGTGCCATCACCATTATTGCCGGTTTATATCGACAACATACACAAAGCCAAGCATGGGAGTGATTCGAGCACCTATGACACCGAAGGAAGGTATGTCCCAGTTAACCTCGAGAACATATTTAGCAAATACGCGCTAACGGTTAAAGATAAGTTATCATTTAAAGAGGTTTGGAATGTAACCGAGGGAAATCGAATGGCAATCGATCCTTTTGGATGGCTTTCAAACAAAGTTGAATGGATACTACTCTATATTCTTGCTAAGGACGAAGATGGTTTCCTATCTAAAGAAGCTGTGAGAGGTTGCTTTGATGGAAGTTTATTTGAACAAATTGCCAAAGAGAGGGCCAATTCTCGCAAACAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001676 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005811 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006636 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009266 GO:0009269 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009751 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010118 GO:0012511 GO:0014070 GO:0016020 GO:0016053 GO:0016491 GO:0016684 GO:0019222 GO:0019752 GO:0031090 GO:0031323 GO:0031407 GO:0031967 GO:0031969 GO:0031975 GO:0032787 GO:0033559 GO:0033993 GO:0042170 GO:0042221 GO:0042493 GO:0042759 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046677 GO:0046872 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0071704 GO:0072330 GO:0097305 GO:0098542 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1902609 GO:1990137 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko00073 map00073

Pfam Domains

Protein Families

Caleosin

Protein Analysis

236

Amino Acids

26.6

Weight (kDa)

5.19

Isoelectric Point (pI)

43.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Caleosin	PF05042	58 - 226	3.5e-77	Caleosin related protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0002731)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33380 AT2G33380 AT4G26740 AT5G55240
fragaria_vesca	FvH4_4g04450 FvH4_4g04450 FvH4_4g04450 FvH4_4g04450 FvH4_4g04450
malus_domestica	MD07G1150700.v1.1 MD13G1220000.v1.1 MD16G1225400.v1.1
prunus_persica	Prupe.1G046800_v2.0.a1
pyrus_communis	pycom13g19460
rosa_chinensis	RchiOBHm_Chr4g0395021 RchiOBHm_Chr4g0395071 RchiOBHm_Chr4g0395111 RchiOBHm_Chr4g0395121
rosa_laevigata	RLG00000009645 RLG00000009648 RLG00000009650
rosa_multiflora	Rmu_co8383771.1_g000001 Rmu_sc0006211.1_g000008 Rmu_sc0007570.1_g000004 Rmu_sc0007891.1_g000013
rosa_roxburghii	Rroxscaffold_5G00340000 Rroxscaffold_5G00340070
rosa_rugosa	Rorug03G0359800.1
rosa_samantha	Rh4AG056500 Rh4AG056600 Rh4BG055300 Rh4BG055500 Rh4BG055700 Rh4CG061400 Rh4CG061700 Rh4DG052800 Rh4DG052900
rosa_wichuraiana	Rw4G004540 Rw4G004560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	249
AccB1I	GGYRCC	2 cut(s)	34, 346
AccII	CGCG	1 cut(s)	476
AclWI	GGATC	1 cut(s)	542
AcoI	YGGCCR	1 cut(s)	24
AfaI	GTAC	1 cut(s)	69
AfiI	CCNNNNNNNGG	3 cut(s)	399, 432, 684
AflIII	ACRYGT	1 cut(s)	193
AgsI	TTSAA	4 cut(s)	274, 567, 578, 668
AluBI	AGCT	4 cut(s)	44, 125, 324, 635
AluI	AGCT	4 cut(s)	44, 125, 324, 635
Alw21I	GWGCWC	1 cut(s)	416
Alw26I	GTCTC	1 cut(s)	236
AlwI	GGATC	1 cut(s)	542
Ama87I	CYCGRG	1 cut(s)	452
AoxI	GGCC	2 cut(s)	24, 687
ApeKI	GCWGC	1 cut(s)	122
AspLEI	GCGC	1 cut(s)	478
AspS9I	GGNCC	2 cut(s)	297, 687
AsuHPI	GGTGA	2 cut(s)	43, 345
AvaI	CYCGRG	1 cut(s)	452
AvaII	GGWCC	1 cut(s)	297
BalI	TGGCCA	1 cut(s)	26
BanI	GGYRCC	2 cut(s)	34, 346
Bbv12I	GWGCWC	1 cut(s)	416
BbvI	GCAGC	1 cut(s)	134
BccI	CCATC	5 cut(s)	215, 358, 552, 608, 647
BceAI	ACGGC	1 cut(s)	48
BcgI	CGANNNNNNTGC	2 cut(s)	328, 362
BciVI	GTATCC	1 cut(s)	576
BcoDI	GTCTC	1 cut(s)	236
BfuI	GTATCC	1 cut(s)	576
BglI	GCCNNNNNGGC	1 cut(s)	32
BisI	GCNGC	1 cut(s)	123
BlsI	GCNGC	1 cut(s)	124
Bme18I	GGWCC	1 cut(s)	297
BmeT110I	CYCGRG	1 cut(s)	452
BmgT120I	GGNCC	2 cut(s)	297, 687
BmiI	GGNNCC	2 cut(s)	36, 348
BmrI	ACTGGG	1 cut(s)	437
BmsI	GCATC	1 cut(s)	148
BmuI	ACTGGG	1 cut(s)	437
BpmI	CTGGAG	1 cut(s)	111
Bpu10I	CCTNAGC	1 cut(s)	603
Bsa29I	ATCGAT	1 cut(s)	546
BsaJI	CCNNGG	3 cut(s)	236, 265, 525
BsaWI	WCCGGW	1 cut(s)	46
Bsc4I	CCNNNNNNNGG	3 cut(s)	399, 432, 684
Bse118I	RCCGGY	1 cut(s)	364
Bse1I	ACTGG	2 cut(s)	54, 443
BseCI	ATCGAT	1 cut(s)	546
BseDI	CCNNGG	3 cut(s)	236, 265, 525
BseGI	GGATG	2 cut(s)	139, 563
BseLI	CCNNNNNNNGG	3 cut(s)	399, 432, 684
BseNI	ACTGG	2 cut(s)	54, 443
BseXI	GCAGC	1 cut(s)	134
Bsh1236I	CGCG	1 cut(s)	476
BshFI	GGCC	2 cut(s)	26, 689
BshNI	GGYRCC	2 cut(s)	34, 346
BshVI	ATCGAT	1 cut(s)	546
BsiHKAI	GWGCWC	1 cut(s)	416
BsiHKCI	CYCGRG	1 cut(s)	452
BsiSI	CCGG	2 cut(s)	47, 365
BslFI	GGGAC	1 cut(s)	425
BslI	CCNNNNNNNGG	3 cut(s)	399, 432, 684
BsmAI	GTCTC	1 cut(s)	236
BsmFI	GGGAC	1 cut(s)	425
BsnI	GGCC	2 cut(s)	26, 689
BsoBI	CYCGRG	1 cut(s)	452
Bsp1286I	GDGCHC	1 cut(s)	416
Bsp143I	GATC	1 cut(s)	547
BspANI	GGCC	2 cut(s)	26, 689
BspDI	ATCGAT	1 cut(s)	546
BspFNI	CGCG	1 cut(s)	476
BspLI	GGNNCC	2 cut(s)	36, 348
BspPI	GGATC	1 cut(s)	542
BspT107I	GGYRCC	2 cut(s)	34, 346
BsrFI	RCCGGY	1 cut(s)	364
BsrI	ACTGG	2 cut(s)	54, 443
BssAI	RCCGGY	1 cut(s)	364
BssECI	CCNNGG	3 cut(s)	236, 265, 525
BssMI	GATC	1 cut(s)	547
BssT1I	CCWWGG	2 cut(s)	236, 265
Bst4CI	ACNGT	2 cut(s)	39, 484
BstDEI	CTNAG	2 cut(s)	313, 603
BstEII	GGTNACC	1 cut(s)	49
BstF5I	GGATG	2 cut(s)	139, 563
BstFNI	CGCG	1 cut(s)	476
BstHHI	GCGC	1 cut(s)	478
BstKTI	GATC	1 cut(s)	550
BstMAI	GTCTC	1 cut(s)	236
BstMBI	GATC	1 cut(s)	547
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 32, 41, 122
BstNSI	RCATGY	1 cut(s)	197
BstPI	GGTNACC	1 cut(s)	49
BstUI	CGCG	1 cut(s)	476
BstV1I	GCAGC	1 cut(s)	134
Bsu15I	ATCGAT	1 cut(s)	546
BsuI	GTATCC	1 cut(s)	576
BsuRI	GGCC	2 cut(s)	26, 689
BsuTUI	ATCGAT	1 cut(s)	546
BtsCI	GGATG	2 cut(s)	139, 563
CfoI	GCGC	1 cut(s)	478
Cfr10I	RCCGGY	1 cut(s)	364
Cfr13I	GGNCC	2 cut(s)	297, 687
ClaI	ATCGAT	1 cut(s)	546
Csp6I	GTAC	1 cut(s)	68
CviAII	CATG	3 cut(s)	106, 194, 398
CviJI	RGCY	9 cut(s)	20, 26, 44, 125, 324, 392, 562, 635, 689
CviKI_1	RGCY	9 cut(s)	20, 26, 44, 125, 324, 392, 562, 635, 689
CviQI	GTAC	1 cut(s)	68
DdeI	CTNAG	2 cut(s)	313, 603
DpnI	GATC	1 cut(s)	549
DpnII	GATC	1 cut(s)	547
DraI	TTTAAA	1 cut(s)	505
EaeI	YGGCCR	1 cut(s)	24
Eco130I	CCWWGG	2 cut(s)	236, 265
Eco47I	GGWCC	1 cut(s)	297
Eco88I	CYCGRG	1 cut(s)	452
Eco91I	GGTNACC	1 cut(s)	49
EcoO65I	GGTNACC	1 cut(s)	49
EcoT14I	CCWWGG	2 cut(s)	236, 265
ErhI	CCWWGG	2 cut(s)	236, 265
FaeI	CATG	3 cut(s)	109, 197, 401
FaqI	GGGAC	1 cut(s)	425
FatI	CATG	3 cut(s)	105, 193, 397
Fnu4HI	GCNGC	1 cut(s)	123
FokI	GGATG	2 cut(s)	126, 570
Fsp4HI	GCNGC	1 cut(s)	123
GlaI	GCGC	1 cut(s)	477
GluI	GCNGC	1 cut(s)	123
GsuI	CTGGAG	1 cut(s)	111
HaeIII	GGCC	2 cut(s)	26, 689
HapII	CCGG	2 cut(s)	47, 365
HhaI	GCGC	1 cut(s)	478
Hin1II	CATG	3 cut(s)	109, 197, 401
Hin6I	GCGC	1 cut(s)	476
HinP1I	GCGC	1 cut(s)	476
HincII	GTYRAC	1 cut(s)	448
HindII	GTYRAC	1 cut(s)	448
HinfI	GANTC	2 cut(s)	225, 407
HpaI	GTTAAC	1 cut(s)	448
HpaII	CCGG	2 cut(s)	47, 365
HphI	GGTGA	2 cut(s)	43, 345
Hpy166II	GTNNAC	1 cut(s)	448
Hpy188I	TCNGA	2 cut(s)	144, 339
Hpy188III	TCNNGA	4 cut(s)	128, 161, 260, 454
Hpy8I	GTNNAC	1 cut(s)	448
Hpy99I	CGWCG	2 cut(s)	34, 221
HpyAV	CCTTC	3 cut(s)	149, 422, 426
HpyCH4III	ACNGT	2 cut(s)	39, 484
HpyCH4IV	ACGT	1 cut(s)	327
HpyCH4V	TGCA	1 cut(s)	187
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 32, 41, 122
HpyF3I	CTNAG	2 cut(s)	313, 603
HpySE526I	ACGT	1 cut(s)	327
Hsp92II	CATG	3 cut(s)	109, 197, 401
HspAI	GCGC	1 cut(s)	476
KspAI	GTTAAC	1 cut(s)	448
Kzo9I	GATC	1 cut(s)	547
LmnI	GCTCC	2 cut(s)	49, 130
LpnPI	CCDG	5 cut(s)	60, 67, 141, 378, 456
Lsp1109I	GCAGC	1 cut(s)	134
LweI	GCATC	1 cut(s)	148
MaeII	ACGT	1 cut(s)	327
MaeIII	GTNAC	5 cut(s)	49, 158, 260, 328, 520
MalI	GATC	1 cut(s)	549
MboI	GATC	1 cut(s)	547
MboII	GAAGA	2 cut(s)	196, 623
MhlI	GDGCHC	1 cut(s)	416
MlsI	TGGCCA	1 cut(s)	26
MluCI	AATT	3 cut(s)	279, 672, 691
MluNI	TGGCCA	1 cut(s)	26
MnlI	CCTC	9 cut(s)	4, 10, 76, 295, 461, 502, 520, 635, 678
Mox20I	TGGCCA	1 cut(s)	26
MscI	TGGCCA	1 cut(s)	26
MseI	TTAA	3 cut(s)	447, 486, 504
MslI	CAYNNNNRTG	2 cut(s)	144, 402
Msp20I	TGGCCA	1 cut(s)	26
MspI	CCGG	2 cut(s)	47, 365
MvnI	CGCG	1 cut(s)	476
MwoI	GCNNNNNNNGC	4 cut(s)	11, 32, 41, 122
NdeII	GATC	1 cut(s)	547
NlaIII	CATG	3 cut(s)	109, 197, 401
NlaIV	GGNNCC	2 cut(s)	36, 348
NmuCI	GTSAC	3 cut(s)	49, 158, 260
NspI	RCATGY	1 cut(s)	197
PaeR7I	CTCGAG	1 cut(s)	452
PciI	ACATGT	1 cut(s)	193
PcsI	WCGNNNNNNNCGW	3 cut(s)	35, 213, 225
PfeI	GAWTC	2 cut(s)	225, 407
PkrI	GCNGC	1 cut(s)	124
PscI	ACATGT	1 cut(s)	193
PsiI	TTATAA	1 cut(s)	249
PspEI	GGTNACC	1 cut(s)	49
PspN4I	GGNNCC	2 cut(s)	36, 348
PspPI	GGNCC	2 cut(s)	297, 687
RsaI	GTAC	1 cut(s)	69
RsaNI	GTAC	1 cut(s)	68
RseI	CAYNNNNRTG	2 cut(s)	144, 402
SaqAI	TTAA	3 cut(s)	447, 486, 504
SatI	GCNGC	1 cut(s)	123
Sau3AI	GATC	1 cut(s)	547
Sau96I	GGNCC	2 cut(s)	297, 687
SduI	GDGCHC	1 cut(s)	416
SfaNI	GCATC	1 cut(s)	148
Sfr274I	CTCGAG	1 cut(s)	452
SinI	GGWCC	1 cut(s)	297
SlaI	CTCGAG	1 cut(s)	452
SmiMI	CAYNNNNRTG	2 cut(s)	144, 402
SmlI	CTYRAG	1 cut(s)	452
SmoI	CTYRAG	1 cut(s)	452
Sse9I	AATT	3 cut(s)	279, 672, 691
StyI	CCWWGG	2 cut(s)	236, 265
TaaI	ACNGT	2 cut(s)	39, 484
TaiI	ACGT	1 cut(s)	330
TaqI	TCGA	6 cut(s)	207, 375, 410, 453, 535, 546
TasI	AATT	3 cut(s)	279, 672, 691
TfiI	GAWTC	2 cut(s)	225, 407
Tru1I	TTAA	3 cut(s)	447, 486, 504
Tru9I	TTAA	3 cut(s)	447, 486, 504
TseFI	GTSAC	3 cut(s)	49, 158, 260
TseI	GCWGC	1 cut(s)	122
Tsp45I	GTSAC	3 cut(s)	49, 158, 260
TspGWI	ACGGA	1 cut(s)	85
VpaK11BI	GGWCC	1 cut(s)	297
XceI	RCATGY	1 cut(s)	197
XcmI	CCANNNNNNNNNTGG	1 cut(s)	218
XhoI	CTCGAG	1 cut(s)	452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.