Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002634

Physical Location & Seq

Genomic Coordinates Reverse (-)

17802841 .. 17806073

Gene Structure 3233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G42790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGAGATATCAGAGAGAGTTCGAGCTCGATTAGCTGTTCTCTCAGGTCATTTATCGGAAGGAAAACAGGATTCTCCAGCGATCGAGCGATGGTGCACGTCGGCGGATACGAGTGTCGCACCGCTTGGATCTTTGAAGGGAACACTGACGATCGTCGACGAACGCACCGGAAAAAATTATAAAGTTCCGGTCTCAGATGATGGTACCGTTAAAGCCGTTGATTTCAAAAAGATAGTGACGGGGAAGGAAGACAAGGGGCTTAAGTTATACGATCCAGGTTACTTGAACACGGCTCCTGTTCGATCTTCGATTTCTTACATCGATGGAGATGAAGGGATCCTTCGTTACCGTGGCTACCCAATTGAGGAAATGGCTGAGAACAGTACTTTTCTGGAGGTGGCTTATCTTCTCATGTATGGGAATCTGCCCTCTGAAAGTCAGCTATCTGATTGGGAGTTTGCAGTTTCTCAGCATTCAGCTGTGCCACAAGGTGTATTAGATATTATACAGTCTATGCCTCATGATGCACACCCAATGGGAGTTCTTGTGAGTGCAATGAGTGCGCTTTCCATCTTTCATCCTGATGCTAATCCTGCTCTTAGGGGCCAGGATATTTACGATTCAAAACAAGTTAGAGATAAACAAATTATCCGCATTATTGGAAAGGCACCAACAATTGCAGCAGCTGCTTATCTGAGGATGGCAGGAAGGCCTCCTGTTCTTCCTTCAGGAAACCTTCCTTATGCAGATAATTTCCTCTATATGCTTGATTCCCTGGGAAATAGATCCTACAAACCTAATCCTCGGCTGGCTCGGGTGTTGGACATCCTCTTCATACTGCATGCAGAGCATGAAATGAACTGCTCCACCGCTGCTGCTCGGCATCTTGCCTCTAGCGGTGTTGATGTCTACACTGCTGTTGCTGGAGCTGTGGGAGCGCTTTATGGTCCACTTCATGGTGGTGCAAACGAGGCTGTGCTTAAGATGTTGTCAGAGATTGGGACTGTTGAAAATATTCCAGAGTTCATTGAGGGTGTGAAGAACAGGAAGAGGAAGATGTCTGGTTTTGGACACCGTGTGTACAAAAACTATGACCCTCGAGCTAAAGTCATCAAGAACCTGGCTGATGAAGTATTTTCCATTGTTGGAAAGGATCCTCTAATTGAGGTTGCTGTTGCACTTGAGAAGGCAGCTCTCTCTGACGATTACTTTGTTAAGAGAAAGCTGTATCCAAATGTTGACTTCTACTCTGGATTAATATACAGGGCAATGGGATTTCCACCGGAGTTCTTCACGGTCTTATTCGCGATTCCTCGCATGGCTGGATACTTGTCACATTGGAAAGAGTCACTGGATGATCCTGACACCAAGATCATGAGACCACAACAGGTGTACACAGGCGTGTGGCTGAGGCATTACACACCAGTGAGAGAGAGAATAGTGACGGATGACTCGAAAGAGTCAGACAAATTGGGTCAAGTCGCGACTTCAAATGCATCAAGAAGACGTTTGGCTGGATCTTCAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004108 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009506 GO:0009514 GO:0009987 GO:0016042 GO:0016054 GO:0016740 GO:0016746 GO:0019395 GO:0019752 GO:0030054 GO:0030258 GO:0032787 GO:0034440 GO:0036440 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046912 GO:0055044 GO:0055114 GO:0071704 GO:0072329 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00020 ko00630 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map00630 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Citrate_synt

Protein Analysis

509

Amino Acids

56.17

Weight (kDa)

7.21

Isoelectric Point (pI)

41.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Citrate_synt	PF00285	93 - 462	5.1e-135	Citrate synthase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002634)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42790 AT3G58740 AT3G58750
fragaria_vesca	FvH4_5g27540 FvH4_6g37750
malus_domestica	MD09G1156400.v1.1 MD17G1142900.v1.1
prunus_persica	Prupe.3G169400_v2.0.a1
pyrus_communis	pycom09g07510 pycom17g13590 pycom17g13600
rosa_chinensis	RchiOBHm_Chr2g0143111 RchiOBHm_Chr2g0150811 RchiOBHm_Chr7g0233461
rosa_laevigata	RLG00000020508
rosa_multiflora	Rmu_co8164368.1_g000001 Rmu_co8192116.1_g000001 Rmu_co8272387.1_g000001 Rmu_sc0003819.1_g000005 Rmu_sc0004794.1_g000003 Rmu_sc0020410.1_g000001
rosa_roxburghii	Rroxscaffold_2G00096940 Rroxscaffold_3G00251810
rosa_rugosa	Rorug02G0103600 Rorug02G0179700 Rorug02G0422600
rosa_samantha	Rh2AG024100 Rh2AG482700 Rh2BG495300 Rh2CG469000 Rh2DG450300 Rh2DG506100 Rh4CG229100 Rh4DG032400 Rh4DG200800 Rh5AG029300 Rh5CG031600 Rh5DG497900 Rh6CG201800
rosa_wichuraiana	Rw2G039560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	180
Acc65I	GGTACC	1 cut(s)	203
AccB1I	GGYRCC	2 cut(s)	203, 667
AccB7I	CCANNNNNTGG	1 cut(s)	956
AccI	GTMKAC	2 cut(s)	156, 909
AccII	CGCG	2 cut(s)	1307, 1484
AciI	CCGC	5 cut(s)	104, 122, 652, 870, 897
AclWI	GGATC	9 cut(s)	136, 266, 331, 344, 780, 1148, 1161, 1352, 1525
AcuI	CTGAAG	2 cut(s)	711, 1506
AdeI	CACNNNGTG	2 cut(s)	491, 1078
AfaI	GTAC	4 cut(s)	205, 385, 1082, 1394
AfeI	AGCGCT	1 cut(s)	939
AfiI	CCNNNNNNNGG	2 cut(s)	364, 956
AflII	CTTAAG	2 cut(s)	260, 980
AgsI	TTSAA	6 cut(s)	136, 226, 286, 624, 1010, 1491
AjiI	CACGTC	1 cut(s)	99
AjnI	CCWGG	4 cut(s)	274, 606, 774, 1119
AleI	CACNNNNGTG	2 cut(s)	1400, 1424
AluBI	AGCT	9 cut(s)	26, 35, 442, 479, 686, 929, 1103, 1193, 1225
AluI	AGCT	9 cut(s)	26, 35, 442, 479, 686, 929, 1103, 1193, 1225
Alw21I	GWGCWC	2 cut(s)	28, 98
Alw26I	GTCTC	2 cut(s)	196, 1372
Alw44I	GTGCAC	1 cut(s)	94
AlwI	GGATC	9 cut(s)	136, 266, 331, 344, 780, 1148, 1161, 1352, 1525
AlwNI	CAGNNNCTG	1 cut(s)	686
Ama87I	CYCGRG	2 cut(s)	813, 1098
Aor51HI	AGCGCT	1 cut(s)	939
AoxI	GGCC	2 cut(s)	604, 710
ApaLI	GTGCAC	1 cut(s)	94
ApeKI	GCWGC	6 cut(s)	680, 683, 686, 872, 875, 1190
ArsI	GACNNNNNNTTYG	2 cut(s)	1193, 1225
AseI	ATTAAT	1 cut(s)	1256
Asp700I	GAANNNNTTC	1 cut(s)	1014
Asp718I	GGTACC	1 cut(s)	203
AspLEI	GCGC	2 cut(s)	565, 940
AspS9I	GGNCC	2 cut(s)	604, 947
AvaI	CYCGRG	2 cut(s)	813, 1098
AvaII	GGWCC	1 cut(s)	947
BaeGI	GKGCMC	1 cut(s)	98
BaeI	ACNNNNGTAYC	2 cut(s)	99, 132
BamHI	GGATCC	2 cut(s)	336, 1153
BanI	GGYRCC	2 cut(s)	203, 667
BanII	GRGCYC	1 cut(s)	28
BbsI	GAAGAC	2 cut(s)	255, 1510
Bbv12I	GWGCWC	2 cut(s)	28, 98
BbvCI	CCTCAGC	1 cut(s)	1409
BbvI	GCAGC	6 cut(s)	673, 692, 695, 859, 862, 1202
BccI	CCATC	5 cut(s)	84, 194, 317, 578, 694
BceAI	ACGGC	2 cut(s)	200, 306
BciT130I	CCWGG	4 cut(s)	276, 608, 776, 1121
BciVI	GTATCC	3 cut(s)	100, 1239, 1319
BcoDI	GTCTC	2 cut(s)	196, 1372
BfaI	CTAG	1 cut(s)	894
BfoI	RGCGCY	1 cut(s)	941
BfrI	CTTAAG	2 cut(s)	260, 980
BfuI	GTATCC	3 cut(s)	100, 1239, 1319
BisI	GCNGC	6 cut(s)	681, 684, 687, 873, 876, 1191
BlsI	GCNGC	6 cut(s)	682, 685, 688, 874, 877, 1192
BmcAI	AGTACT	1 cut(s)	385
Bme1390I	CCNGG	4 cut(s)	276, 608, 776, 1121
Bme18I	GGWCC	1 cut(s)	947
BmeT110I	CYCGRG	2 cut(s)	813, 1098
BmgBI	CACGTC	1 cut(s)	99
BmgT120I	GGNCC	2 cut(s)	604, 947
BmiI	GGNNCC	6 cut(s)	205, 294, 338, 605, 669, 1155
BmrFI	CCNGG	4 cut(s)	276, 608, 776, 1121
BmsI	GCATC	4 cut(s)	514, 574, 892, 1505
BoxI	GACNNNNGTC	1 cut(s)	152
BpiI	GAAGAC	2 cut(s)	255, 1510
BpmI	CTGGAG	3 cut(s)	60, 413, 945
Bpu10I	CCTNAGC	1 cut(s)	1409
BpuEI	CTTGAG	1 cut(s)	1202
Bsa29I	ATCGAT	1 cut(s)	321
BsaBI	GATNNNNATC	1 cut(s)	588
BsaI	GGTCTC	2 cut(s)	196, 1372
BsaJI	CCNNGG	4 cut(s)	349, 774, 775, 803
BsaWI	WCCGGW	3 cut(s)	167, 187, 1282
BsaXI	ACNNNNNCTCC	2 cut(s)	531, 561
Bsc4I	CCNNNNNNNGG	2 cut(s)	364, 956
Bse1I	ACTGG	2 cut(s)	1356, 1424
Bse3DI	GCAATG	2 cut(s)	561, 1275
Bse8I	GATNNNNATC	1 cut(s)	588
BseBI	CCWGG	4 cut(s)	276, 608, 776, 1121
BseCI	ATCGAT	1 cut(s)	321
BseDI	CCNNGG	4 cut(s)	349, 774, 775, 803
BseGI	GGATG	5 cut(s)	577, 705, 825, 1360, 1453
BseJI	GATNNNNATC	1 cut(s)	588
BseLI	CCNNNNNNNGG	2 cut(s)	364, 956
BseMI	GCAATG	2 cut(s)	561, 1275
BseMII	CTCAG	6 cut(s)	57, 207, 366, 482, 686, 1400
BseNI	ACTGG	2 cut(s)	1356, 1424
BseSI	GKGCMC	1 cut(s)	98
BseXI	GCAGC	6 cut(s)	673, 692, 695, 859, 862, 1202
Bsh1236I	CGCG	2 cut(s)	1307, 1484
Bsh1285I	CGRYCG	2 cut(s)	84, 153
BshFI	GGCC	2 cut(s)	606, 712
BshNI	GGYRCC	2 cut(s)	203, 667
BshVI	ATCGAT	1 cut(s)	321
BsiEI	CGRYCG	2 cut(s)	84, 153
BsiHKAI	GWGCWC	2 cut(s)	28, 98
BsiHKCI	CYCGRG	2 cut(s)	813, 1098
BsiSI	CCGG	3 cut(s)	168, 188, 1283
BslFI	GGGAC	1 cut(s)	1015
BslI	CCNNNNNNNGG	2 cut(s)	364, 956
BsmAI	GTCTC	2 cut(s)	196, 1372
BsmFI	GGGAC	1 cut(s)	1015
BsmI	GAATGC	1 cut(s)	472
BsnI	GGCC	2 cut(s)	606, 712
Bso31I	GGTCTC	2 cut(s)	196, 1372
BsoBI	CYCGRG	2 cut(s)	813, 1098
Bsp1286I	GDGCHC	2 cut(s)	28, 98
Bsp1407I	TGTACA	2 cut(s)	1080, 1392
Bsp68I	TCGCGA	2 cut(s)	1307, 1484
BspACI	CCGC	5 cut(s)	104, 122, 652, 870, 897
BspANI	GGCC	2 cut(s)	606, 712
BspCNI	CTCAG	6 cut(s)	56, 206, 367, 481, 687, 1401
BspDI	ATCGAT	1 cut(s)	321
BspFNI	CGCG	2 cut(s)	1307, 1484
BspHI	TCATGA	2 cut(s)	520, 1374
BspLI	GGNNCC	6 cut(s)	205, 294, 338, 605, 669, 1155
BspPI	GGATC	9 cut(s)	136, 266, 331, 344, 780, 1148, 1161, 1352, 1525
BspT107I	GGYRCC	2 cut(s)	203, 667
BspTI	CTTAAG	2 cut(s)	260, 980
BspTNI	GGTCTC	2 cut(s)	196, 1372
BsrDI	GCAATG	2 cut(s)	561, 1275
BsrGI	TGTACA	2 cut(s)	1080, 1392
BsrI	ACTGG	2 cut(s)	1356, 1424
BssECI	CCNNGG	4 cut(s)	349, 774, 775, 803
Bst2UI	CCWGG	4 cut(s)	276, 608, 776, 1121
Bst4CI	ACNGT	7 cut(s)	208, 350, 383, 510, 1006, 1076, 1297
Bst6I	CTCTTC	2 cut(s)	836, 1043
BstAFI	CTTAAG	2 cut(s)	260, 980
BstAPI	GCANNNNNTGC	2 cut(s)	560, 686
BstAUI	TGTACA	2 cut(s)	1080, 1392
BstC8I	GCNNGC	2 cut(s)	810, 843
BstDEI	CTNAG	7 cut(s)	43, 193, 375, 468, 599, 695, 1409
BstDSI	CCRYGG	1 cut(s)	349
BstF5I	GGATG	5 cut(s)	577, 705, 825, 1360, 1453
BstFNI	CGCG	2 cut(s)	1307, 1484
BstH2I	RGCGCY	1 cut(s)	941
BstHHI	GCGC	2 cut(s)	565, 940
BstMAI	GTCTC	2 cut(s)	196, 1372
BstMCI	CGRYCG	2 cut(s)	84, 153
BstMWI	GCNNNNNNNGC	7 cut(s)	32, 560, 593, 686, 847, 935, 971
BstNI	CCWGG	4 cut(s)	276, 608, 776, 1121
BstNSI	RCATGY	1 cut(s)	845
BstPAI	GACNNNNGTC	1 cut(s)	152
BstSCI	CCNGG	4 cut(s)	274, 606, 774, 1119
BstSLI	GKGCMC	1 cut(s)	98
BstUI	CGCG	2 cut(s)	1307, 1484
BstV1I	GCAGC	6 cut(s)	673, 692, 695, 859, 862, 1202
BstV2I	GAAGAC	2 cut(s)	255, 1510
BstX2I	RGATCY	5 cut(s)	128, 336, 785, 1153, 1517
BstYI	RGATCY	5 cut(s)	128, 336, 785, 1153, 1517
Bsu15I	ATCGAT	1 cut(s)	321
BsuI	GTATCC	3 cut(s)	100, 1239, 1319
BsuRI	GGCC	2 cut(s)	606, 712
BsuTUI	ATCGAT	1 cut(s)	321
BtgI	CCRYGG	1 cut(s)	349
BtgZI	GCGATG	1 cut(s)	103
BtrI	CACGTC	1 cut(s)	99
BtsCI	GGATG	5 cut(s)	577, 705, 825, 1360, 1453
BtsI	GCAGTG	1 cut(s)	912
BtsIMutI	CAGTG	4 cut(s)	143, 912, 1349, 1431
BtuMI	TCGCGA	2 cut(s)	1307, 1484
Cac8I	GCNNGC	2 cut(s)	810, 843
CaiI	CAGNNNCTG	1 cut(s)	686
CciI	TCATGA	2 cut(s)	520, 1374
CfoI	GCGC	2 cut(s)	565, 940
Cfr13I	GGNCC	2 cut(s)	604, 947
ClaI	ATCGAT	1 cut(s)	321
Csp6I	GTAC	4 cut(s)	204, 384, 1081, 1393
CviAII	CATG	7 cut(s)	412, 521, 842, 851, 956, 1318, 1375
CviQI	GTAC	4 cut(s)	204, 384, 1081, 1393
DdeI	CTNAG	7 cut(s)	43, 193, 375, 468, 599, 695, 1409
DraIII	CACNNNGTG	2 cut(s)	491, 1078
Eam1104I	CTCTTC	2 cut(s)	836, 1043
EarI	CTCTTC	2 cut(s)	836, 1043
EciI	GGCGGA	1 cut(s)	119
Ecl136II	GAGCTC	1 cut(s)	26
Eco147I	AGGCCT	1 cut(s)	712
Eco24I	GRGCYC	1 cut(s)	28
Eco31I	GGTCTC	2 cut(s)	196, 1372
Eco32I	GATATC	1 cut(s)	9
Eco47I	GGWCC	1 cut(s)	947
Eco47III	AGCGCT	1 cut(s)	939
Eco53kI	GAGCTC	1 cut(s)	26
Eco57I	CTGAAG	2 cut(s)	711, 1506
Eco88I	CYCGRG	2 cut(s)	813, 1098
EcoICRI	GAGCTC	1 cut(s)	26
EcoRII	CCWGG	4 cut(s)	274, 606, 774, 1119
EcoRV	GATATC	1 cut(s)	9
EcoT22I	ATGCAT	1 cut(s)	1498
EcoT38I	GRGCYC	1 cut(s)	28
FaeI	CATG	7 cut(s)	415, 524, 845, 854, 959, 1321, 1378
FalI	AAGNNNNNCTT	2 cut(s)	324, 356
FaqI	GGGAC	1 cut(s)	1015
FatI	CATG	7 cut(s)	411, 520, 841, 850, 955, 1317, 1374
FblI	GTMKAC	2 cut(s)	156, 909
Fnu4HI	GCNGC	6 cut(s)	681, 684, 687, 873, 876, 1191
FokI	GGATG	5 cut(s)	564, 712, 812, 1367, 1460
FriOI	GRGCYC	1 cut(s)	28
Fsp4HI	GCNGC	6 cut(s)	681, 684, 687, 873, 876, 1191
FspBI	CTAG	1 cut(s)	894
GlaI	GCGC	2 cut(s)	564, 939
GluI	GCNGC	6 cut(s)	681, 684, 687, 873, 876, 1191
GsuI	CTGGAG	3 cut(s)	60, 413, 945
HaeII	RGCGCY	1 cut(s)	941
HaeIII	GGCC	2 cut(s)	606, 712
HapII	CCGG	3 cut(s)	168, 188, 1283
HhaI	GCGC	2 cut(s)	565, 940
Hin1II	CATG	7 cut(s)	415, 524, 845, 854, 959, 1321, 1378
Hin6I	GCGC	2 cut(s)	563, 938
HinP1I	GCGC	2 cut(s)	563, 938
HincII	GTYRAC	2 cut(s)	157, 1240
HindII	GTYRAC	2 cut(s)	157, 1240
HinfI	GANTC	8 cut(s)	71, 421, 620, 770, 1309, 1346, 1451, 1460
HpaII	CCGG	3 cut(s)	168, 188, 1283
Hpy166II	GTNNAC	8 cut(s)	96, 157, 910, 950, 1081, 1240, 1393, 1395
Hpy188I	TCNGA	9 cut(s)	13, 58, 196, 433, 448, 696, 994, 1201, 1465
Hpy8I	GTNNAC	8 cut(s)	96, 157, 910, 950, 1081, 1240, 1393, 1395
Hpy99I	CGWCG	3 cut(s)	103, 158, 161
HpyAV	CCTTC	9 cut(s)	53, 130, 238, 326, 350, 702, 735, 746, 1180
HpyCH4III	ACNGT	7 cut(s)	208, 350, 383, 510, 1006, 1076, 1297
HpyCH4IV	ACGT	2 cut(s)	98, 1507
HpyF10VI	GCNNNNNNNGC	7 cut(s)	32, 560, 593, 686, 847, 935, 971
HpyF3I	CTNAG	7 cut(s)	43, 193, 375, 468, 599, 695, 1409
HpySE526I	ACGT	2 cut(s)	98, 1507
Hsp92II	CATG	7 cut(s)	415, 524, 845, 854, 959, 1321, 1378
HspAI	GCGC	2 cut(s)	563, 938
KpnI	GGTACC	1 cut(s)	207
LmnI	GCTCC	4 cut(s)	298, 869, 926, 935
Lsp1109I	GCAGC	6 cut(s)	673, 692, 695, 859, 862, 1202
LweI	GCATC	4 cut(s)	514, 574, 892, 1505
MaeI	CTAG	1 cut(s)	894
MaeII	ACGT	2 cut(s)	98, 1507
MaeIII	GTNAC	6 cut(s)	235, 278, 344, 1332, 1347, 1441
MfeI	CAATTG	2 cut(s)	360, 675
MflI	RGATCY	5 cut(s)	128, 336, 785, 1153, 1517
MhlI	GDGCHC	2 cut(s)	28, 98
MluCI	AATT	7 cut(s)	175, 360, 645, 675, 751, 1161, 1469
MlyI	GAGTC	3 cut(s)	1355, 1445, 1469
MmeI	TCCRAC	2 cut(s)	801, 1126
Mph1103I	ATGCAT	1 cut(s)	1498
MroXI	GAANNNNTTC	1 cut(s)	1014
MseI	TTAA	5 cut(s)	210, 261, 981, 1215, 1256
MslI	CAYNNNNRTG	4 cut(s)	582, 960, 1400, 1424
MspA1I	CMGCKG	3 cut(s)	479, 686, 872
MspCI	CTTAAG	2 cut(s)	260, 980
MspI	CCGG	3 cut(s)	168, 188, 1283
MspR9I	CCNGG	4 cut(s)	276, 608, 776, 1121
MunI	CAATTG	2 cut(s)	360, 675
Mva1269I	GAATGC	1 cut(s)	472
MvaI	CCWGG	4 cut(s)	276, 608, 776, 1121
MvnI	CGCG	2 cut(s)	1307, 1484
MwoI	GCNNNNNNNGC	7 cut(s)	32, 560, 593, 686, 847, 935, 971
NlaIII	CATG	7 cut(s)	415, 524, 845, 854, 959, 1321, 1378
NlaIV	GGNNCC	6 cut(s)	205, 294, 338, 605, 669, 1155
NmeAIII	GCCGAG	2 cut(s)	784, 859
NmuCI	GTSAC	4 cut(s)	235, 1332, 1347, 1441
NruI	TCGCGA	2 cut(s)	1307, 1484
NsiI	ATGCAT	1 cut(s)	1498
NspI	RCATGY	1 cut(s)	845
OliI	CACNNNNGTG	2 cut(s)	1400, 1424
PaeI	GCATGC	1 cut(s)	845
PaeR7I	CTCGAG	1 cut(s)	1098
PagI	TCATGA	2 cut(s)	520, 1374
PasI	CCCWGGG	1 cut(s)	775
PceI	AGGCCT	1 cut(s)	712
PcsI	WCGNNNNNNNCGW	2 cut(s)	107, 1451
PctI	GAATGC	1 cut(s)	472
PdmI	GAANNNNTTC	1 cut(s)	1014
PfeI	GAWTC	5 cut(s)	71, 421, 620, 770, 1309
PflMI	CCANNNNNTGG	1 cut(s)	956
PkrI	GCNGC	6 cut(s)	682, 685, 688, 874, 877, 1192
Ple19I	CGATCG	2 cut(s)	84, 153
PleI	GAGTC	3 cut(s)	1354, 1445, 1468
PpsI	GAGTC	3 cut(s)	1354, 1445, 1468
PshAI	GACNNNNGTC	1 cut(s)	152
PshBI	ATTAAT	1 cut(s)	1256
PsiI	TTATAA	1 cut(s)	180
Psp124BI	GAGCTC	1 cut(s)	28
Psp6I	CCWGG	4 cut(s)	274, 606, 774, 1119
PspGI	CCWGG	4 cut(s)	274, 606, 774, 1119
PspN4I	GGNNCC	6 cut(s)	205, 294, 338, 605, 669, 1155
PspPI	GGNCC	2 cut(s)	604, 947
PspXI	VCTCGAGB	1 cut(s)	1098
PstNI	CAGNNNCTG	1 cut(s)	686
PsuI	RGATCY	5 cut(s)	128, 336, 785, 1153, 1517
PvuI	CGATCG	2 cut(s)	84, 153
PvuII	CAGCTG	2 cut(s)	479, 686
RruI	TCGCGA	2 cut(s)	1307, 1484
RsaI	GTAC	4 cut(s)	205, 385, 1082, 1394
RsaNI	GTAC	4 cut(s)	204, 384, 1081, 1393
RseI	CAYNNNNRTG	4 cut(s)	582, 960, 1400, 1424
SacI	GAGCTC	1 cut(s)	28
SalI	GTCGAC	1 cut(s)	155
SaqAI	TTAA	5 cut(s)	210, 261, 981, 1215, 1256
SatI	GCNGC	6 cut(s)	681, 684, 687, 873, 876, 1191
Sau96I	GGNCC	2 cut(s)	604, 947
ScaI	AGTACT	1 cut(s)	385
SchI	GAGTC	3 cut(s)	1355, 1445, 1469
ScrFI	CCNGG	4 cut(s)	276, 608, 776, 1121
SduI	GDGCHC	2 cut(s)	28, 98
SfaNI	GCATC	4 cut(s)	514, 574, 892, 1505
Sfr274I	CTCGAG	1 cut(s)	1098
SgrDI	CGTCGACG	1 cut(s)	155
SinI	GGWCC	1 cut(s)	947
SlaI	CTCGAG	1 cut(s)	1098
SmiMI	CAYNNNNRTG	4 cut(s)	582, 960, 1400, 1424
SmlI	CTYRAG	4 cut(s)	260, 980, 1098, 1181
SmoI	CTYRAG	4 cut(s)	260, 980, 1098, 1181
SphI	GCATGC	1 cut(s)	845
Sse9I	AATT	7 cut(s)	175, 360, 645, 675, 751, 1161, 1469
SseBI	AGGCCT	1 cut(s)	712
SsiI	CCGC	5 cut(s)	104, 122, 652, 870, 897
SspI	AATATT	1 cut(s)	1015
SspMI	CTAG	1 cut(s)	894
SstI	GAGCTC	1 cut(s)	28
StuI	AGGCCT	1 cut(s)	712
StyD4I	CCNGG	4 cut(s)	274, 606, 774, 1119
TaaI	ACNGT	7 cut(s)	208, 350, 383, 510, 1006, 1076, 1297
TaiI	ACGT	2 cut(s)	101, 1510
TaqI	TCGA	9 cut(s)	22, 28, 84, 156, 301, 308, 321, 1099, 1454
TasI	AATT	7 cut(s)	175, 360, 645, 675, 751, 1161, 1469
TatI	WGTACW	3 cut(s)	383, 1080, 1392
TfiI	GAWTC	5 cut(s)	71, 421, 620, 770, 1309
Tru1I	TTAA	5 cut(s)	210, 261, 981, 1215, 1256
Tru9I	TTAA	5 cut(s)	210, 261, 981, 1215, 1256
TscAI	CASTG	4 cut(s)	150, 919, 1356, 1431
TseFI	GTSAC	4 cut(s)	235, 1332, 1347, 1441
TseI	GCWGC	6 cut(s)	680, 683, 686, 872, 875, 1190
Tsp45I	GTSAC	4 cut(s)	235, 1332, 1347, 1441
TspDTI	ATGAA	8 cut(s)	345, 566, 823, 867, 872, 944, 1015, 1143
TspGWI	ACGGA	1 cut(s)	1460
TspRI	CASTG	4 cut(s)	150, 919, 1356, 1431
Van91I	CCANNNNNTGG	1 cut(s)	956
Vha464I	CTTAAG	2 cut(s)	260, 980
VneI	GTGCAC	1 cut(s)	94
VpaK11BI	GGWCC	1 cut(s)	947
VspI	ATTAAT	1 cut(s)	1256
XceI	RCATGY	1 cut(s)	845
XhoI	CTCGAG	1 cut(s)	1098
XmiI	GTMKAC	2 cut(s)	156, 909
XmnI	GAANNNNTTC	1 cut(s)	1014
XspI	CTAG	1 cut(s)	894
ZrmI	AGTACT	1 cut(s)	385
Zsp2I	ATGCAT	1 cut(s)	1498

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.