Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002634

Physical Location & Seq

Genomic Coordinates Reverse (-)

68481347 .. 68485495

Gene Structure 4149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52006

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGTCGAGTGAATTTCCGGTAAGAGCTCGTGGCCGCTTGGCCGTGCTTTCTGCCCACCTCGCCGCCGCAACCATCTCCGAGTCCTCGGAGCTCGAGCCTCAGTGCTTGTCCGCCCAGGTCCCGCCTCCGGCGAACCTCCGCGGCGCTTTGACCGTCGTTGACGAGAGGACCGGTAAGCGCTACCAGGTCCAGGTCTCCGAACAAGGAACCGTCAAGGCCACTGATCTCAAAAAGATTAGTACGGGGAAGAATGATAAGGGGCTGAAGCTGTATGATCCGGGATATCTCAACACTGCGCCGGTTCGATCTTCGATTTGTTATATTGATGGAGATGAGGGGATTCTTAGGTACAGAGGGTATCCAATTGAGGAATTGGCTGAGAGTAGTACTTATTTGGAAGTGGCATATCTCCTCATGTATGGGAATTTGCCTTCTCAAAGCCAGTTAGCGGATTGGGAATTCGCTGTTACTCAGCATTCAGCTGTGCCGCAGGGGATTTTGGATATTATACAAGCAATACCTCATGATGCACATCCAATGGGTGTACTTGTCAGCGCAATGAGTGCTCTTTCTGTTTTTCACCCTGATGCCAATCCTGCCCTCAGAGGGCAAGACCTTTACCAGTCCAAACAAGTGAGAGACAAACAAATTGCACGGATTCTTGGGAAGGCACCAACTATTGCAGCAGCAGCTTATTTGAGATTGGCAGGAAGACCCCCAGTTCTCCCATCTAACAACCTTTCTTATTCTGAGAACTTCTTATACATGCTAGACTCCTTGGGCGATAGAGCTTATAAACCAAATCCTCGCCTCGCCCGAGTATTGGACATTCTCTTCATACTCCATGCTGAACATGAGATGAATTGCTCAACGGCTGCTGCTCGGCATCTGGCGTCTAGTGGTGTGGATGTTTACACTGCCCTTTCCGGAGCTGTTGGAGCTCTATATGGTCCCCTTCATGGTGGAGCAAATGAGGCTGTGCTTAAGATGCTAAGTGAAATTGGATCTGTTGAGAACATTCCAGAGTTCATTGAGGGTGTGAAGAGCAGGAAGCGAAAGATGTCAGGTTTTGGGCATCGCGTGTACAAGAACTATGATCCTAGAGCAAAGGTCATAAGAAAGCTGGCAGATGAAGTATTCTCCATTGTTGGAAGGGATCCACTGATTGAGGTTGCTGTTGCTTTGGAGAAAGCTGCACTATCTGACGAGTATTTTGTTAAGAGAAAGCTATATCCTAATGTTGATTTCTACTCTGGGTTGATATATAGGGCAATGGGATTTCCAACGGAGTTCTTCCCAGTTTTATTTGCAATCCCTAGAATGGCTGGTTACTTGGCACACTGGAGAGAATCCCTGGATGATCCTGATACTAAGATTATGAGGCCCGCACAGGTATATGTTGGGGAGTGGCTGCGGCACTATATGCCATTGAAAGAACGGATAGTGAGCACTGATGTAGACAAACTGTCTCAAGTTTCTGTTTCAAACGCCTCCAAGCGTCGTTTGTCTGGATCTGGAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004108 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009506 GO:0009514 GO:0009987 GO:0016042 GO:0016054 GO:0016740 GO:0016746 GO:0019395 GO:0019752 GO:0030054 GO:0030258 GO:0032787 GO:0034440 GO:0036440 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046912 GO:0055044 GO:0055114 GO:0071704 GO:0072329 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00020 ko00630 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map00630 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Citrate_synt

Protein Analysis

507

Amino Acids

55.86

Weight (kDa)

8.65

Isoelectric Point (pI)

40.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Citrate_synt	PF00285	94 - 463	5.4e-135	Citrate synthase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002634)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42790 AT3G58740 AT3G58750
fragaria_vesca	FvH4_5g27540 FvH4_6g37750
malus_domestica	MD09G1156400.v1.1 MD17G1142900.v1.1
prunus_persica	Prupe.3G169400_v2.0.a1
pyrus_communis	pycom09g07510 pycom17g13590 pycom17g13600
rosa_chinensis	RchiOBHm_Chr2g0143111 RchiOBHm_Chr2g0150811 RchiOBHm_Chr7g0233461
rosa_laevigata	RLG00000020508
rosa_multiflora	Rmu_co8164368.1_g000001 Rmu_co8192116.1_g000001 Rmu_co8272387.1_g000001 Rmu_sc0003819.1_g000005 Rmu_sc0004794.1_g000003 Rmu_sc0020410.1_g000001
rosa_roxburghii	Rroxscaffold_2G00096940 Rroxscaffold_3G00251810
rosa_rugosa	Rorug02G0103600 Rorug02G0179700 Rorug02G0422600
rosa_samantha	Rh2AG024100 Rh2AG482700 Rh2BG495300 Rh2CG469000 Rh2DG450300 Rh2DG506100 Rh4CG229100 Rh4DG032400 Rh4DG200800 Rh5AG029300 Rh5CG031600 Rh5DG497900 Rh6CG201800
rosa_wichuraiana	Rw2G039560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	795
AccB1I	GGYRCC	1 cut(s)	670
AccI	GTMKAC	1 cut(s)	1458
AccII	CGCG	2 cut(s)	141, 1080
AccIII	TCCGGA	1 cut(s)	926
AclWI	GGATC	7 cut(s)	269, 1012, 1091, 1151, 1164, 1355, 1519
AcoI	YGGCCR	2 cut(s)	31, 39
AcsI	RAATTY	3 cut(s)	11, 424, 458
AcuI	CTGAAG	1 cut(s)	284
AcyI	GRCGYC	1 cut(s)	893
AfaI	GTAC	5 cut(s)	241, 350, 388, 546, 1085
AfeI	AGCGCT	1 cut(s)	179
AfiI	CCNNNNNNNGG	7 cut(s)	127, 190, 448, 606, 823, 959, 1321
AflII	CTTAAG	1 cut(s)	983
AgeI	ACCGGT	1 cut(s)	170
AgsI	TTSAA	2 cut(s)	1432, 1485
AhdI	GACNNNNNGTC	1 cut(s)	1465
AjnI	CCWGG	4 cut(s)	114, 183, 189, 1353
Alw21I	GWGCWC	5 cut(s)	28, 93, 568, 943, 1451
Alw26I	GTCTC	3 cut(s)	199, 633, 1473
AlwI	GGATC	7 cut(s)	269, 1012, 1091, 1151, 1164, 1355, 1519
Ama87I	CYCGRG	2 cut(s)	92, 816
Aor13HI	TCCGGA	1 cut(s)	926
Aor51HI	AGCGCT	1 cut(s)	179
AoxI	GGCC	4 cut(s)	31, 39, 216, 1382
ApeKI	GCWGC	7 cut(s)	683, 686, 689, 875, 878, 1193, 1411
ApoI	RAATTY	3 cut(s)	11, 424, 458
ArsI	GACNNNNNNTTYG	2 cut(s)	1196, 1228
AsiGI	ACCGGT	1 cut(s)	170
AspLEI	GCGC	4 cut(s)	146, 180, 298, 557
AspS9I	GGNCC	5 cut(s)	118, 168, 187, 950, 1383
AsuC2I	CCSGG	1 cut(s)	279
AsuHPI	GGTGA	1 cut(s)	572
AvaI	CYCGRG	2 cut(s)	92, 816
AvaII	GGWCC	4 cut(s)	118, 168, 187, 950
BamHI	GGATCC	1 cut(s)	1156
BanI	GGYRCC	1 cut(s)	670
BanII	GRGCYC	3 cut(s)	28, 93, 943
BauI	CACGAG	1 cut(s)	27
BbsI	GAAGAC	1 cut(s)	718
Bbv12I	GWGCWC	5 cut(s)	28, 93, 568, 943, 1451
BbvI	GCAGC	7 cut(s)	695, 698, 701, 862, 865, 1180, 1398
BccI	CCATC	3 cut(s)	80, 320, 736
BceAI	ACGGC	2 cut(s)	26, 888
BciT130I	CCWGG	4 cut(s)	116, 185, 191, 1355
BciVI	GTATCC	1 cut(s)	369
BcnI	CCSGG	1 cut(s)	279
BcoDI	GTCTC	3 cut(s)	199, 633, 1473
BfaI	CTAG	4 cut(s)	770, 897, 1101, 1317
BfoI	RGCGCY	2 cut(s)	147, 181
BfrI	CTTAAG	1 cut(s)	983
BfuI	GTATCC	1 cut(s)	369
BmcAI	AGTACT	1 cut(s)	388
Bme1390I	CCNGG	5 cut(s)	116, 185, 191, 279, 1355
Bme18I	GGWCC	4 cut(s)	118, 168, 187, 950
BmeRI	GACNNNNNGTC	1 cut(s)	1465
BmeT110I	CYCGRG	2 cut(s)	92, 816
BmgT120I	GGNCC	5 cut(s)	118, 168, 187, 950, 1383
BmiI	GGNNCC	5 cut(s)	120, 208, 672, 952, 1158
BmrFI	CCNGG	5 cut(s)	116, 185, 191, 279, 1355
BmrI	ACTGGG	2 cut(s)	713, 1292
BmsI	GCATC	5 cut(s)	517, 577, 895, 978, 1084
BmuI	ACTGGG	2 cut(s)	713, 1292
BpiI	GAAGAC	1 cut(s)	718
BpmI	CTGGAG	1 cut(s)	1363
BpuEI	CTTGAG	1 cut(s)	1455
BpuMI	CCSGG	1 cut(s)	279
BsaBI	GATNNNNATC	2 cut(s)	531, 591
BsaHI	GRCGYC	1 cut(s)	893
BsaI	GGTCTC	1 cut(s)	199
BsaJI	CCNNGG	5 cut(s)	84, 114, 139, 777, 1353
BsaWI	WCCGGW	3 cut(s)	16, 170, 926
Bsc4I	CCNNNNNNNGG	7 cut(s)	127, 190, 448, 606, 823, 959, 1321
Bse118I	RCCGGY	2 cut(s)	170, 298
Bse1I	ACTGG	5 cut(s)	442, 622, 719, 1298, 1346
Bse3DI	GCAATG	2 cut(s)	564, 1278
Bse8I	GATNNNNATC	2 cut(s)	531, 591
BseAI	TCCGGA	1 cut(s)	926
BseBI	CCWGG	4 cut(s)	116, 185, 191, 1355
BseDI	CCNNGG	5 cut(s)	84, 114, 139, 777, 1353
BseGI	GGATG	3 cut(s)	532, 913, 1363
BseJI	GATNNNNATC	2 cut(s)	531, 591
BseLI	CCNNNNNNNGG	7 cut(s)	127, 190, 448, 606, 823, 959, 1321
BseMI	GCAATG	2 cut(s)	564, 1278
BseMII	CTCAG	5 cut(s)	113, 369, 485, 616, 741
BseNI	ACTGG	5 cut(s)	442, 622, 719, 1298, 1346
BseRI	GAGGAG	1 cut(s)	401
BseXI	GCAGC	7 cut(s)	695, 698, 701, 862, 865, 1180, 1398
BsgI	GTGCAG	1 cut(s)	1179
Bsh1236I	CGCG	2 cut(s)	141, 1080
BshFI	GGCC	4 cut(s)	33, 41, 218, 1384
BshNI	GGYRCC	1 cut(s)	670
BshTI	ACCGGT	1 cut(s)	170
BsiHKAI	GWGCWC	5 cut(s)	28, 93, 568, 943, 1451
BsiHKCI	CYCGRG	2 cut(s)	92, 816
BsiSI	CCGG	6 cut(s)	17, 128, 171, 278, 299, 927
BslFI	GGGAC	2 cut(s)	104, 936
BslI	CCNNNNNNNGG	7 cut(s)	127, 190, 448, 606, 823, 959, 1321
BsmAI	GTCTC	3 cut(s)	199, 633, 1473
BsmFI	GGGAC	2 cut(s)	104, 936
BsmI	GAATGC	1 cut(s)	475
BsnI	GGCC	4 cut(s)	33, 41, 218, 1384
Bso31I	GGTCTC	1 cut(s)	199
BsoBI	CYCGRG	2 cut(s)	92, 816
Bsp1286I	GDGCHC	5 cut(s)	28, 93, 568, 943, 1451
Bsp13I	TCCGGA	1 cut(s)	926
Bsp1407I	TGTACA	1 cut(s)	1083
Bsp143I	GATC	8 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360, 1511
BspANI	GGCC	4 cut(s)	33, 41, 218, 1384
BspCNI	CTCAG	5 cut(s)	112, 370, 484, 615, 742
BspEI	TCCGGA	1 cut(s)	926
BspFNI	CGCG	2 cut(s)	141, 1080
BspHI	TCATGA	1 cut(s)	523
BspLI	GGNNCC	5 cut(s)	120, 208, 672, 952, 1158
BspPI	GGATC	7 cut(s)	269, 1012, 1091, 1151, 1164, 1355, 1519
BspQI	GCTCTTC	1 cut(s)	1037
BspT107I	GGYRCC	1 cut(s)	670
BspTI	CTTAAG	1 cut(s)	983
BspTNI	GGTCTC	1 cut(s)	199
BsrDI	GCAATG	2 cut(s)	564, 1278
BsrFI	RCCGGY	2 cut(s)	170, 298
BsrGI	TGTACA	1 cut(s)	1083
BsrI	ACTGG	5 cut(s)	442, 622, 719, 1298, 1346
BssAI	RCCGGY	2 cut(s)	170, 298
BssECI	CCNNGG	5 cut(s)	84, 114, 139, 777, 1353
BssMI	GATC	8 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360, 1511
BssNI	GRCGYC	1 cut(s)	893
BssSI	CACGAG	1 cut(s)	27
BssT1I	CCWWGG	1 cut(s)	777
Bst2BI	CACGAG	1 cut(s)	27
Bst2UI	CCWGG	4 cut(s)	116, 185, 191, 1355
Bst4CI	ACNGT	3 cut(s)	154, 211, 1467
Bst6I	CTCTTC	2 cut(s)	839, 1037
BstACI	GRCGYC	1 cut(s)	893
BstAFI	CTTAAG	1 cut(s)	983
BstAPI	GCANNNNNTGC	2 cut(s)	563, 1423
BstAUI	TGTACA	1 cut(s)	1083
BstC8I	GCNNGC	2 cut(s)	1125, 1386
BstDEI	CTNAG	8 cut(s)	99, 344, 378, 471, 602, 750, 992, 1371
BstDSI	CCRYGG	1 cut(s)	139
BstF5I	GGATG	3 cut(s)	532, 913, 1363
BstFNI	CGCG	2 cut(s)	141, 1080
BstH2I	RGCGCY	2 cut(s)	147, 181
BstHHI	GCGC	4 cut(s)	146, 180, 298, 557
BstKTI	GATC	8 cut(s)	226, 277, 308, 1007, 1099, 1159, 1363, 1514
BstMAI	GTCTC	3 cut(s)	199, 633, 1473
BstMBI	GATC	8 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360, 1511
BstMWI	GCNNNNNNNGC	8 cut(s)	59, 563, 596, 689, 938, 974, 988, 1423
BstNI	CCWGG	4 cut(s)	116, 185, 191, 1355
BstNSI	RCATGY	1 cut(s)	769
BstSCI	CCNGG	5 cut(s)	114, 183, 189, 277, 1353
BstUI	CGCG	2 cut(s)	141, 1080
BstV1I	GCAGC	7 cut(s)	695, 698, 701, 862, 865, 1180, 1398
BstV2I	GAAGAC	1 cut(s)	718
BstX2I	RGATCY	3 cut(s)	1004, 1156, 1511
BstYI	RGATCY	3 cut(s)	1004, 1156, 1511
BsuI	GTATCC	1 cut(s)	369
BsuRI	GGCC	4 cut(s)	33, 41, 218, 1384
BtgI	CCRYGG	1 cut(s)	139
BtgZI	GCGATG	1 cut(s)	1061
BtsCI	GGATG	3 cut(s)	532, 913, 1363
BtsI	GCAGTG	2 cut(s)	291, 915
BtsIMutI	CAGTG	7 cut(s)	107, 219, 291, 915, 1160, 1339, 1449
Cac8I	GCNNGC	2 cut(s)	1125, 1386
CciI	TCATGA	1 cut(s)	523
CfoI	GCGC	4 cut(s)	146, 180, 298, 557
Cfr10I	RCCGGY	2 cut(s)	170, 298
Cfr13I	GGNCC	5 cut(s)	118, 168, 187, 950, 1383
Cfr42I	CCGCGG	1 cut(s)	142
CseI	GACGC	2 cut(s)	882, 1487
CsiI	ACCWGGT	1 cut(s)	183
Csp6I	GTAC	5 cut(s)	240, 349, 387, 545, 1084
CspAI	ACCGGT	1 cut(s)	170
CviAII	CATG	6 cut(s)	415, 524, 766, 845, 854, 959
CviQI	GTAC	5 cut(s)	240, 349, 387, 545, 1084
DdeI	CTNAG	8 cut(s)	99, 344, 378, 471, 602, 750, 992, 1371
DpnI	GATC	8 cut(s)	225, 276, 307, 1006, 1098, 1158, 1362, 1513
DpnII	GATC	8 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360, 1511
DriI	GACNNNNNGTC	1 cut(s)	1465
EaeI	YGGCCR	2 cut(s)	31, 39
Eam1104I	CTCTTC	2 cut(s)	839, 1037
Eam1105I	GACNNNNNGTC	1 cut(s)	1465
EarI	CTCTTC	2 cut(s)	839, 1037
EciI	GGCGGA	1 cut(s)	100
Ecl136II	GAGCTC	3 cut(s)	26, 91, 941
Eco130I	CCWWGG	1 cut(s)	777
Eco24I	GRGCYC	3 cut(s)	28, 93, 943
Eco31I	GGTCTC	1 cut(s)	199
Eco32I	GATATC	1 cut(s)	284
Eco47I	GGWCC	4 cut(s)	118, 168, 187, 950
Eco47III	AGCGCT	1 cut(s)	179
Eco53kI	GAGCTC	3 cut(s)	26, 91, 941
Eco57I	CTGAAG	1 cut(s)	284
Eco88I	CYCGRG	2 cut(s)	92, 816
EcoICRI	GAGCTC	3 cut(s)	26, 91, 941
EcoO109I	RGGNCCY	1 cut(s)	118
EcoRI	GAATTC	1 cut(s)	458
EcoRII	CCWGG	4 cut(s)	114, 183, 189, 1353
EcoRV	GATATC	1 cut(s)	284
EcoT14I	CCWWGG	1 cut(s)	777
EcoT38I	GRGCYC	3 cut(s)	28, 93, 943
ErhI	CCWWGG	1 cut(s)	777
FaeI	CATG	6 cut(s)	418, 527, 769, 848, 857, 962
FaqI	GGGAC	2 cut(s)	104, 936
FatI	CATG	6 cut(s)	414, 523, 765, 844, 853, 958
FauI	CCCGC	2 cut(s)	129, 1393
FblI	GTMKAC	1 cut(s)	1458
FokI	GGATG	3 cut(s)	519, 920, 1370
FriOI	GRGCYC	3 cut(s)	28, 93, 943
FspBI	CTAG	4 cut(s)	770, 897, 1101, 1317
GlaI	GCGC	4 cut(s)	145, 179, 297, 556
GsuI	CTGGAG	1 cut(s)	1363
HaeII	RGCGCY	2 cut(s)	147, 181
HaeIII	GGCC	4 cut(s)	33, 41, 218, 1384
HapII	CCGG	6 cut(s)	17, 128, 171, 278, 299, 927
HgaI	GACGC	2 cut(s)	882, 1487
HhaI	GCGC	4 cut(s)	146, 180, 298, 557
Hin1I	GRCGYC	1 cut(s)	893
Hin1II	CATG	6 cut(s)	418, 527, 769, 848, 857, 962
Hin6I	GCGC	4 cut(s)	144, 178, 296, 555
HinP1I	GCGC	4 cut(s)	144, 178, 296, 555
HincII	GTYRAC	1 cut(s)	160
HindII	GTYRAC	1 cut(s)	160
HinfI	GANTC	5 cut(s)	80, 340, 658, 773, 1349
HpaII	CCGG	6 cut(s)	17, 128, 171, 278, 299, 927
HphI	GGTGA	1 cut(s)	572
Hpy166II	GTNNAC	5 cut(s)	160, 545, 913, 1084, 1459
Hpy188I	TCNGA	6 cut(s)	79, 88, 199, 605, 751, 1204
Hpy188III	TCNNGA	6 cut(s)	524, 927, 1022, 1364, 1509, 1515
Hpy8I	GTNNAC	5 cut(s)	160, 545, 913, 1084, 1459
Hpy99I	CGWCG	2 cut(s)	158, 1503
HpyAV	CCTTC	4 cut(s)	441, 661, 965, 1146
HpyCH4III	ACNGT	3 cut(s)	154, 211, 1467
HpyCH4V	TGCA	5 cut(s)	530, 653, 683, 1196, 1310
HpyF10VI	GCNNNNNNNGC	8 cut(s)	59, 563, 596, 689, 938, 974, 988, 1423
HpyF3I	CTNAG	8 cut(s)	99, 344, 378, 471, 602, 750, 992, 1371
Hsp92I	GRCGYC	1 cut(s)	893
Hsp92II	CATG	6 cut(s)	418, 527, 769, 848, 857, 962
HspAI	GCGC	4 cut(s)	144, 178, 296, 555
Kpn2I	TCCGGA	1 cut(s)	926
KspI	CCGCGG	1 cut(s)	142
Kzo9I	GATC	8 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360, 1511
LguI	GCTCTTC	1 cut(s)	1037
LmnI	GCTCC	4 cut(s)	88, 929, 938, 965
Lsp1109I	GCAGC	7 cut(s)	695, 698, 701, 862, 865, 1180, 1398
LweI	GCATC	5 cut(s)	517, 577, 895, 978, 1084
MabI	ACCWGGT	1 cut(s)	183
MaeI	CTAG	4 cut(s)	770, 897, 1101, 1317
MaeIII	GTNAC	2 cut(s)	466, 1328
MalI	GATC	8 cut(s)	225, 276, 307, 1006, 1098, 1158, 1362, 1513
MboI	GATC	8 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360, 1511
MboII	GAAGA	6 cut(s)	259, 300, 723, 826, 1054, 1285
MfeI	CAATTG	1 cut(s)	363
MflI	RGATCY	3 cut(s)	1004, 1156, 1511
MhlI	GDGCHC	5 cut(s)	28, 93, 568, 943, 1451
MluCI	AATT	8 cut(s)	11, 363, 371, 424, 458, 648, 862, 999
MlyI	GAGTC	2 cut(s)	89, 767
MmeI	TCCRAC	3 cut(s)	916, 1129, 1307
MroI	TCCGGA	1 cut(s)	926
MseI	TTAA	2 cut(s)	984, 1218
MslI	CAYNNNNRTG	1 cut(s)	585
MspA1I	CMGCKG	2 cut(s)	141, 482
MspCI	CTTAAG	1 cut(s)	983
MspI	CCGG	6 cut(s)	17, 128, 171, 278, 299, 927
MspR9I	CCNGG	5 cut(s)	116, 185, 191, 279, 1355
MunI	CAATTG	1 cut(s)	363
Mva1269I	GAATGC	1 cut(s)	475
MvaI	CCWGG	4 cut(s)	116, 185, 191, 1355
MvnI	CGCG	2 cut(s)	141, 1080
MwoI	GCNNNNNNNGC	8 cut(s)	59, 563, 596, 689, 938, 974, 988, 1423
NciI	CCSGG	1 cut(s)	279
NdeII	GATC	8 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360, 1511
NlaIII	CATG	6 cut(s)	418, 527, 769, 848, 857, 962
NlaIV	GGNNCC	5 cut(s)	120, 208, 672, 952, 1158
NmeAIII	GCCGAG	1 cut(s)	862
NspI	RCATGY	1 cut(s)	769
PaeR7I	CTCGAG	1 cut(s)	92
PagI	TCATGA	1 cut(s)	523
PciSI	GCTCTTC	1 cut(s)	1037
PcsI	WCGNNNNNNNCGW	1 cut(s)	814
PctI	GAATGC	1 cut(s)	475
PfeI	GAWTC	3 cut(s)	340, 658, 1349
PfoI	TCCNGGA	1 cut(s)	277
PinAI	ACCGGT	1 cut(s)	170
PleI	GAGTC	2 cut(s)	88, 767
PpsI	GAGTC	2 cut(s)	88, 767
PpuMI	RGGWCCY	1 cut(s)	118
PsiI	TTATAA	1 cut(s)	795
Psp124BI	GAGCTC	3 cut(s)	28, 93, 943
Psp5II	RGGWCCY	1 cut(s)	118
Psp6I	CCWGG	4 cut(s)	114, 183, 189, 1353
PspGI	CCWGG	4 cut(s)	114, 183, 189, 1353
PspN4I	GGNNCC	5 cut(s)	120, 208, 672, 952, 1158
PspPI	GGNCC	5 cut(s)	118, 168, 187, 950, 1383
PspPPI	RGGWCCY	1 cut(s)	118
PspXI	VCTCGAGB	1 cut(s)	92
PsrI	GAACNNNNNNTAC	2 cut(s)	746, 778
PsuI	RGATCY	3 cut(s)	1004, 1156, 1511
PvuII	CAGCTG	1 cut(s)	482
RsaI	GTAC	5 cut(s)	241, 350, 388, 546, 1085
RsaNI	GTAC	5 cut(s)	240, 349, 387, 545, 1084
RseI	CAYNNNNRTG	1 cut(s)	585
SacI	GAGCTC	3 cut(s)	28, 93, 943
SacII	CCGCGG	1 cut(s)	142
SapI	GCTCTTC	1 cut(s)	1037
SaqAI	TTAA	2 cut(s)	984, 1218
Sau3AI	GATC	8 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360, 1511
Sau96I	GGNCC	5 cut(s)	118, 168, 187, 950, 1383
ScaI	AGTACT	1 cut(s)	388
SchI	GAGTC	2 cut(s)	89, 767
ScrFI	CCNGG	5 cut(s)	116, 185, 191, 279, 1355
SduI	GDGCHC	5 cut(s)	28, 93, 568, 943, 1451
SexAI	ACCWGGT	1 cut(s)	183
SfaNI	GCATC	5 cut(s)	517, 577, 895, 978, 1084
Sfr274I	CTCGAG	1 cut(s)	92
Sfr303I	CCGCGG	1 cut(s)	142
SgrBI	CCGCGG	1 cut(s)	142
SinI	GGWCC	4 cut(s)	118, 168, 187, 950
SlaI	CTCGAG	1 cut(s)	92
SmiMI	CAYNNNNRTG	1 cut(s)	585
SmlI	CTYRAG	3 cut(s)	92, 983, 1470
SmoI	CTYRAG	3 cut(s)	92, 983, 1470
Sse9I	AATT	8 cut(s)	11, 363, 371, 424, 458, 648, 862, 999
SspMI	CTAG	4 cut(s)	770, 897, 1101, 1317
SstI	GAGCTC	3 cut(s)	28, 93, 943
StyD4I	CCNGG	5 cut(s)	114, 183, 189, 277, 1353
StyI	CCWWGG	1 cut(s)	777
TaaI	ACNGT	3 cut(s)	154, 211, 1467
TaqI	TCGA	4 cut(s)	5, 93, 304, 311
TasI	AATT	8 cut(s)	11, 363, 371, 424, 458, 648, 862, 999
TatI	WGTACW	3 cut(s)	386, 544, 1083
TauI	GCSGC	6 cut(s)	36, 65, 68, 144, 490, 1417
TfiI	GAWTC	3 cut(s)	340, 658, 1349
Tru1I	TTAA	2 cut(s)	984, 1218
Tru9I	TTAA	2 cut(s)	984, 1218
TscAI	CASTG	7 cut(s)	107, 226, 298, 922, 1167, 1346, 1456
TseI	GCWGC	7 cut(s)	683, 686, 689, 875, 878, 1193, 1411
TspDTI	ATGAA	5 cut(s)	826, 875, 947, 1018, 1146
TspGWI	ACGGA	3 cut(s)	670, 1301, 1453
TspRI	CASTG	7 cut(s)	107, 226, 298, 922, 1167, 1346, 1456
Vha464I	CTTAAG	1 cut(s)	983
VpaK11BI	GGWCC	4 cut(s)	118, 168, 187, 950
XapI	RAATTY	3 cut(s)	11, 424, 458
XceI	RCATGY	1 cut(s)	769
XhoI	CTCGAG	1 cut(s)	92
XmiI	GTMKAC	1 cut(s)	1458
XspI	CTAG	4 cut(s)	770, 897, 1101, 1317
ZrmI	AGTACT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.