Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0002634

Physical Location & Seq

Genomic Coordinates Reverse (-)

70348217 .. 70352561

Gene Structure 4345 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG482700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGTCGAGTGAATTTCCGGTAAGAGCTCGTGGCCGCTTGGCCGTGCTTTCGGCCCACCTCGCCGCCGCAACCATCTCCGAGTCCTCGGAGCTCGAGCCTCAGTGCTTGTCCGCCCAGGTCCCGCCTCCGGCGAACCTCCGCGGCGCTTTGACCGTCGTTGATGAGAGGACCGGTAAGCGCTACCAGGTCCAGGTCTCCGAACAAGGAACCGTCAAGGCCACTGATCTCAAAAAGATTAGTACGGGGAAGAATGATAAGGGGCTGAAGCTGTATGATCCGGGATATCTCAACACTGCGCCGGTTCGATCTTCGATTTGTTATATTGATGGGGATGAGGGGATTCTTAGGTACAGAGGGTATCCAATTGAGGAATTGGCTGAGAGTAGTACTTATTTGGAAGTGGCATATCTCCTCATGTATGGGAATTTGCCTTCTCAAAGCCAATTAGCGGATTGGGAATTTGCCGTTACTCAGCATTCAGCTGTACCACAGGGGATTTTGGATATTATACAAGCAATACCTCATGATGCACATCCAATGGGTGTACTTGTCAGCGCAATGAGTGCTCTTTCTGTTTTTCACCCTGATGCCAATCCTGCCCTCAGAGGGCAAGACCTTTACCAGTCCAAACAAGTGAGAGACAAACAAATTGCACGGATTCTTGGGAAGGCACCAACTATTGCAGCAGCAGCTTATTTGAGATTGGCAGGAAGACCCCCAGTTCTCCCATCTAACAACCTTTCTTATTCTGAGAACTTCTTATACATGCTAGACTCCTTGGGCAATAGAGCTTATAAACCAAATCCCCGCCTCGCCCGAGTTTTGGACATTCTCTTCATACTCCACGCTGAACATGAGATGAATTGCTCAACGGCTGCTGCTCGGCATCTGGCGTCTAGTGGTGTGGATGTTTACACTGCCCTTTCCGGAGCTGTTGGAGCTCTATATGGTCCCCTTCATGGTGGAGCAAATGAGGCTGTGCTTAAGATGCTAAGTGAAATTGGATCTGTTGAGAACATTCCAGAGTTCATTGAGGGTGTGAAGAGCAGGAAGCGAAAGATGTCAGGTTTTGGGCATCGCGTGTACAAGAACTATGATCCTAGAGCAAAGGTCATAAGAAAGCTGGCAGATGAAGTATTCTCCATTGTTGGAAGGGATCCACTGATTGAGGTTGCTGTTGCTTTGGAGAAAGCTGCTCTATCTGACGAGTATTTTGTTAAGAGAAAGCTATATCCTAATGTTGATTTCTACTCTGGGTTGATATATAGGGCAATGGGATTTCCAACGGAGTTCTTCCCAGTTTTATTTGCAATCCCTAGAATGGCTGGTTACTTGGCACACTGGAGAGAATCCCTGGATGATCCTGATACTAAGATTATGAGGCCCGCACAGGTTAGTTCAAATCTGTGTTCAGGCATCTGGAATATCTTTCCTTTTTTTTTTTGTCTCTCTCCTCGGGTGTTTGTAAATGAATTTAAGTGTCCAAATCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004108 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005911 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009506 GO:0009514 GO:0009987 GO:0016042 GO:0016054 GO:0016740 GO:0016746 GO:0019395 GO:0019752 GO:0030054 GO:0030258 GO:0032787 GO:0034440 GO:0036440 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046912 GO:0055044 GO:0055114 GO:0071704 GO:0072329 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00020 ko00630 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map00630 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Citrate_synt

Protein Analysis

497

Amino Acids

54.86

Weight (kDa)

8.35

Isoelectric Point (pI)

40.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Citrate_synt	PF00285	94 - 463	5.1e-135	Citrate synthase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002634)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42790 AT3G58740 AT3G58750
fragaria_vesca	FvH4_5g27540 FvH4_6g37750
malus_domestica	MD09G1156400.v1.1 MD17G1142900.v1.1
prunus_persica	Prupe.3G169400_v2.0.a1
pyrus_communis	pycom09g07510 pycom17g13590 pycom17g13600
rosa_chinensis	RchiOBHm_Chr2g0143111 RchiOBHm_Chr2g0150811 RchiOBHm_Chr7g0233461
rosa_laevigata	RLG00000020508
rosa_multiflora	Rmu_co8164368.1_g000001 Rmu_co8192116.1_g000001 Rmu_co8272387.1_g000001 Rmu_sc0003819.1_g000005 Rmu_sc0004794.1_g000003 Rmu_sc0020410.1_g000001
rosa_roxburghii	Rroxscaffold_2G00096940 Rroxscaffold_3G00251810
rosa_rugosa	Rorug02G0103600 Rorug02G0179700 Rorug02G0422600
rosa_samantha	Rh2AG024100 Rh2AG482700 Rh2BG495300 Rh2CG469000 Rh2DG450300 Rh2DG506100 Rh4CG229100 Rh4DG032400 Rh4DG200800 Rh5AG029300 Rh5CG031600 Rh5DG497900 Rh6CG201800
rosa_wichuraiana	Rw2G039560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	795
AccB1I	GGYRCC	1 cut(s)	670
AccII	CGCG	2 cut(s)	141, 1080
AccIII	TCCGGA	1 cut(s)	926
AclWI	GGATC	6 cut(s)	269, 1012, 1091, 1151, 1164, 1355
AcoI	YGGCCR	2 cut(s)	31, 39
AcsI	RAATTY	4 cut(s)	11, 424, 458, 1472
AcuI	CTGAAG	1 cut(s)	284
AcyI	GRCGYC	1 cut(s)	893
AfaI	GTAC	6 cut(s)	241, 350, 388, 486, 546, 1085
AfeI	AGCGCT	1 cut(s)	179
AfiI	CCNNNNNNNGG	7 cut(s)	127, 190, 448, 606, 823, 959, 1321
AflII	CTTAAG	1 cut(s)	983
AgeI	ACCGGT	1 cut(s)	170
AgsI	TTSAA	1 cut(s)	1401
AjnI	CCWGG	4 cut(s)	114, 183, 189, 1353
Alw21I	GWGCWC	4 cut(s)	28, 93, 568, 943
Alw26I	GTCTC	3 cut(s)	199, 633, 1451
AlwI	GGATC	6 cut(s)	269, 1012, 1091, 1151, 1164, 1355
Ama87I	CYCGRG	3 cut(s)	92, 816, 1455
Aor13HI	TCCGGA	1 cut(s)	926
Aor51HI	AGCGCT	1 cut(s)	179
AoxI	GGCC	5 cut(s)	31, 39, 51, 216, 1382
ApeKI	GCWGC	6 cut(s)	683, 686, 689, 875, 878, 1193
ApoI	RAATTY	4 cut(s)	11, 424, 458, 1472
ArsI	GACNNNNNNTTYG	2 cut(s)	1196, 1228
AsiGI	ACCGGT	1 cut(s)	170
AspLEI	GCGC	4 cut(s)	146, 180, 298, 557
AspS9I	GGNCC	6 cut(s)	52, 118, 168, 187, 950, 1383
AsuC2I	CCSGG	1 cut(s)	279
AsuHPI	GGTGA	1 cut(s)	572
AvaI	CYCGRG	3 cut(s)	92, 816, 1455
AvaII	GGWCC	4 cut(s)	118, 168, 187, 950
BamHI	GGATCC	1 cut(s)	1156
BanI	GGYRCC	1 cut(s)	670
BanII	GRGCYC	3 cut(s)	28, 93, 943
BauI	CACGAG	1 cut(s)	27
BbsI	GAAGAC	1 cut(s)	718
Bbv12I	GWGCWC	4 cut(s)	28, 93, 568, 943
BbvI	GCAGC	6 cut(s)	695, 698, 701, 862, 865, 1180
BccI	CCATC	3 cut(s)	80, 320, 736
BceAI	ACGGC	3 cut(s)	26, 449, 888
BciT130I	CCWGG	4 cut(s)	116, 185, 191, 1355
BciVI	GTATCC	1 cut(s)	369
BcnI	CCSGG	1 cut(s)	279
BcoDI	GTCTC	3 cut(s)	199, 633, 1451
BfaI	CTAG	4 cut(s)	770, 897, 1101, 1317
BfoI	RGCGCY	2 cut(s)	147, 181
BfrI	CTTAAG	1 cut(s)	983
BfuI	GTATCC	1 cut(s)	369
BmcAI	AGTACT	1 cut(s)	388
Bme1390I	CCNGG	5 cut(s)	116, 185, 191, 279, 1355
Bme18I	GGWCC	4 cut(s)	118, 168, 187, 950
BmeT110I	CYCGRG	3 cut(s)	92, 816, 1455
BmgT120I	GGNCC	6 cut(s)	52, 118, 168, 187, 950, 1383
BmiI	GGNNCC	5 cut(s)	120, 208, 672, 952, 1158
BmrFI	CCNGG	5 cut(s)	116, 185, 191, 279, 1355
BmrI	ACTGGG	2 cut(s)	713, 1292
BmsI	GCATC	6 cut(s)	517, 577, 895, 978, 1084, 1425
BmuI	ACTGGG	2 cut(s)	713, 1292
BpiI	GAAGAC	1 cut(s)	718
BpmI	CTGGAG	1 cut(s)	1363
BpuMI	CCSGG	1 cut(s)	279
BsaBI	GATNNNNATC	2 cut(s)	531, 591
BsaHI	GRCGYC	1 cut(s)	893
BsaI	GGTCTC	1 cut(s)	199
BsaJI	CCNNGG	6 cut(s)	84, 114, 139, 777, 1353, 1454
BsaWI	WCCGGW	3 cut(s)	16, 170, 926
Bsc4I	CCNNNNNNNGG	7 cut(s)	127, 190, 448, 606, 823, 959, 1321
Bse118I	RCCGGY	2 cut(s)	170, 298
Bse1I	ACTGG	4 cut(s)	622, 719, 1298, 1346
Bse3DI	GCAATG	2 cut(s)	564, 1278
Bse8I	GATNNNNATC	2 cut(s)	531, 591
BseAI	TCCGGA	1 cut(s)	926
BseBI	CCWGG	4 cut(s)	116, 185, 191, 1355
BseDI	CCNNGG	6 cut(s)	84, 114, 139, 777, 1353, 1454
BseGI	GGATG	4 cut(s)	337, 532, 913, 1363
BseJI	GATNNNNATC	2 cut(s)	531, 591
BseLI	CCNNNNNNNGG	7 cut(s)	127, 190, 448, 606, 823, 959, 1321
BseMI	GCAATG	2 cut(s)	564, 1278
BseMII	CTCAG	5 cut(s)	113, 369, 485, 616, 741
BseNI	ACTGG	4 cut(s)	622, 719, 1298, 1346
BseRI	GAGGAG	2 cut(s)	401, 1443
BseXI	GCAGC	6 cut(s)	695, 698, 701, 862, 865, 1180
Bsh1236I	CGCG	2 cut(s)	141, 1080
BshFI	GGCC	5 cut(s)	33, 41, 53, 218, 1384
BshNI	GGYRCC	1 cut(s)	670
BshTI	ACCGGT	1 cut(s)	170
BsiHKAI	GWGCWC	4 cut(s)	28, 93, 568, 943
BsiHKCI	CYCGRG	3 cut(s)	92, 816, 1455
BsiSI	CCGG	6 cut(s)	17, 128, 171, 278, 299, 927
BslFI	GGGAC	2 cut(s)	104, 936
BslI	CCNNNNNNNGG	7 cut(s)	127, 190, 448, 606, 823, 959, 1321
BsmAI	GTCTC	3 cut(s)	199, 633, 1451
BsmFI	GGGAC	2 cut(s)	104, 936
BsmI	GAATGC	1 cut(s)	475
BsnI	GGCC	5 cut(s)	33, 41, 53, 218, 1384
Bso31I	GGTCTC	1 cut(s)	199
BsoBI	CYCGRG	3 cut(s)	92, 816, 1455
Bsp1286I	GDGCHC	4 cut(s)	28, 93, 568, 943
Bsp13I	TCCGGA	1 cut(s)	926
Bsp1407I	TGTACA	1 cut(s)	1083
Bsp143I	GATC	7 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360
BspANI	GGCC	5 cut(s)	33, 41, 53, 218, 1384
BspCNI	CTCAG	5 cut(s)	112, 370, 484, 615, 742
BspEI	TCCGGA	1 cut(s)	926
BspFNI	CGCG	2 cut(s)	141, 1080
BspHI	TCATGA	1 cut(s)	523
BspLI	GGNNCC	5 cut(s)	120, 208, 672, 952, 1158
BspPI	GGATC	6 cut(s)	269, 1012, 1091, 1151, 1164, 1355
BspQI	GCTCTTC	1 cut(s)	1037
BspT107I	GGYRCC	1 cut(s)	670
BspTI	CTTAAG	1 cut(s)	983
BspTNI	GGTCTC	1 cut(s)	199
BsrDI	GCAATG	2 cut(s)	564, 1278
BsrFI	RCCGGY	2 cut(s)	170, 298
BsrGI	TGTACA	1 cut(s)	1083
BsrI	ACTGG	4 cut(s)	622, 719, 1298, 1346
BssAI	RCCGGY	2 cut(s)	170, 298
BssECI	CCNNGG	6 cut(s)	84, 114, 139, 777, 1353, 1454
BssMI	GATC	7 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360
BssNI	GRCGYC	1 cut(s)	893
BssSI	CACGAG	1 cut(s)	27
BssT1I	CCWWGG	1 cut(s)	777
Bst2BI	CACGAG	1 cut(s)	27
Bst2UI	CCWGG	4 cut(s)	116, 185, 191, 1355
Bst4CI	ACNGT	2 cut(s)	154, 211
Bst6I	CTCTTC	2 cut(s)	839, 1037
BstACI	GRCGYC	1 cut(s)	893
BstAFI	CTTAAG	1 cut(s)	983
BstAPI	GCANNNNNTGC	1 cut(s)	563
BstAUI	TGTACA	1 cut(s)	1083
BstC8I	GCNNGC	2 cut(s)	1125, 1386
BstDEI	CTNAG	8 cut(s)	99, 344, 378, 471, 602, 750, 992, 1371
BstDSI	CCRYGG	1 cut(s)	139
BstF5I	GGATG	4 cut(s)	337, 532, 913, 1363
BstFNI	CGCG	2 cut(s)	141, 1080
BstH2I	RGCGCY	2 cut(s)	147, 181
BstHHI	GCGC	4 cut(s)	146, 180, 298, 557
BstKTI	GATC	7 cut(s)	226, 277, 308, 1007, 1099, 1159, 1363
BstMAI	GTCTC	3 cut(s)	199, 633, 1451
BstMBI	GATC	7 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360
BstMWI	GCNNNNNNNGC	7 cut(s)	59, 563, 596, 689, 938, 974, 988
BstNI	CCWGG	4 cut(s)	116, 185, 191, 1355
BstNSI	RCATGY	1 cut(s)	769
BstSCI	CCNGG	5 cut(s)	114, 183, 189, 277, 1353
BstUI	CGCG	2 cut(s)	141, 1080
BstV1I	GCAGC	6 cut(s)	695, 698, 701, 862, 865, 1180
BstV2I	GAAGAC	1 cut(s)	718
BstX2I	RGATCY	2 cut(s)	1004, 1156
BstYI	RGATCY	2 cut(s)	1004, 1156
BsuI	GTATCC	1 cut(s)	369
BsuRI	GGCC	5 cut(s)	33, 41, 53, 218, 1384
BtgI	CCRYGG	1 cut(s)	139
BtgZI	GCGATG	1 cut(s)	1061
BtsCI	GGATG	4 cut(s)	337, 532, 913, 1363
BtsI	GCAGTG	2 cut(s)	291, 915
BtsIMutI	CAGTG	6 cut(s)	107, 219, 291, 915, 1160, 1339
Cac8I	GCNNGC	2 cut(s)	1125, 1386
CciI	TCATGA	1 cut(s)	523
CfoI	GCGC	4 cut(s)	146, 180, 298, 557
Cfr10I	RCCGGY	2 cut(s)	170, 298
Cfr13I	GGNCC	6 cut(s)	52, 118, 168, 187, 950, 1383
Cfr42I	CCGCGG	1 cut(s)	142
CseI	GACGC	1 cut(s)	882
CsiI	ACCWGGT	1 cut(s)	183
Csp6I	GTAC	6 cut(s)	240, 349, 387, 485, 545, 1084
CspAI	ACCGGT	1 cut(s)	170
CviAII	CATG	5 cut(s)	415, 524, 766, 854, 959
CviQI	GTAC	6 cut(s)	240, 349, 387, 485, 545, 1084
DdeI	CTNAG	8 cut(s)	99, 344, 378, 471, 602, 750, 992, 1371
DpnI	GATC	7 cut(s)	225, 276, 307, 1006, 1098, 1158, 1362
DpnII	GATC	7 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360
EaeI	YGGCCR	2 cut(s)	31, 39
Eam1104I	CTCTTC	2 cut(s)	839, 1037
EarI	CTCTTC	2 cut(s)	839, 1037
EciI	GGCGGA	1 cut(s)	100
Ecl136II	GAGCTC	3 cut(s)	26, 91, 941
Eco130I	CCWWGG	1 cut(s)	777
Eco24I	GRGCYC	3 cut(s)	28, 93, 943
Eco31I	GGTCTC	1 cut(s)	199
Eco32I	GATATC	1 cut(s)	284
Eco47I	GGWCC	4 cut(s)	118, 168, 187, 950
Eco47III	AGCGCT	1 cut(s)	179
Eco53kI	GAGCTC	3 cut(s)	26, 91, 941
Eco57I	CTGAAG	1 cut(s)	284
Eco88I	CYCGRG	3 cut(s)	92, 816, 1455
EcoICRI	GAGCTC	3 cut(s)	26, 91, 941
EcoO109I	RGGNCCY	1 cut(s)	118
EcoRII	CCWGG	4 cut(s)	114, 183, 189, 1353
EcoRV	GATATC	1 cut(s)	284
EcoT14I	CCWWGG	1 cut(s)	777
EcoT38I	GRGCYC	3 cut(s)	28, 93, 943
ErhI	CCWWGG	1 cut(s)	777
FaeI	CATG	5 cut(s)	418, 527, 769, 857, 962
FaqI	GGGAC	2 cut(s)	104, 936
FatI	CATG	5 cut(s)	414, 523, 765, 853, 958
FauI	CCCGC	3 cut(s)	129, 815, 1393
FokI	GGATG	4 cut(s)	344, 519, 920, 1370
FriOI	GRGCYC	3 cut(s)	28, 93, 943
FspBI	CTAG	4 cut(s)	770, 897, 1101, 1317
GlaI	GCGC	4 cut(s)	145, 179, 297, 556
GsuI	CTGGAG	1 cut(s)	1363
HaeII	RGCGCY	2 cut(s)	147, 181
HaeIII	GGCC	5 cut(s)	33, 41, 53, 218, 1384
HapII	CCGG	6 cut(s)	17, 128, 171, 278, 299, 927
HgaI	GACGC	1 cut(s)	882
HhaI	GCGC	4 cut(s)	146, 180, 298, 557
Hin1I	GRCGYC	1 cut(s)	893
Hin1II	CATG	5 cut(s)	418, 527, 769, 857, 962
Hin6I	GCGC	4 cut(s)	144, 178, 296, 555
HinP1I	GCGC	4 cut(s)	144, 178, 296, 555
HinfI	GANTC	5 cut(s)	80, 340, 658, 773, 1349
HpaII	CCGG	6 cut(s)	17, 128, 171, 278, 299, 927
HphI	GGTGA	1 cut(s)	572
Hpy166II	GTNNAC	3 cut(s)	545, 913, 1084
Hpy188I	TCNGA	6 cut(s)	79, 88, 199, 605, 751, 1204
Hpy188III	TCNNGA	5 cut(s)	524, 927, 1022, 1364, 1420
Hpy8I	GTNNAC	3 cut(s)	545, 913, 1084
Hpy99I	CGWCG	1 cut(s)	158
HpyAV	CCTTC	4 cut(s)	441, 661, 965, 1146
HpyCH4III	ACNGT	2 cut(s)	154, 211
HpyCH4V	TGCA	4 cut(s)	530, 653, 683, 1310
HpyF10VI	GCNNNNNNNGC	7 cut(s)	59, 563, 596, 689, 938, 974, 988
HpyF3I	CTNAG	8 cut(s)	99, 344, 378, 471, 602, 750, 992, 1371
Hsp92I	GRCGYC	1 cut(s)	893
Hsp92II	CATG	5 cut(s)	418, 527, 769, 857, 962
HspAI	GCGC	4 cut(s)	144, 178, 296, 555
Kpn2I	TCCGGA	1 cut(s)	926
KspI	CCGCGG	1 cut(s)	142
Kzo9I	GATC	7 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360
LguI	GCTCTTC	1 cut(s)	1037
LmnI	GCTCC	4 cut(s)	88, 929, 938, 965
Lsp1109I	GCAGC	6 cut(s)	695, 698, 701, 862, 865, 1180
LweI	GCATC	6 cut(s)	517, 577, 895, 978, 1084, 1425
MabI	ACCWGGT	1 cut(s)	183
MaeI	CTAG	4 cut(s)	770, 897, 1101, 1317
MaeIII	GTNAC	2 cut(s)	466, 1328
MalI	GATC	7 cut(s)	225, 276, 307, 1006, 1098, 1158, 1362
MboI	GATC	7 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360
MboII	GAAGA	6 cut(s)	259, 300, 723, 826, 1054, 1285
MfeI	CAATTG	1 cut(s)	363
MflI	RGATCY	2 cut(s)	1004, 1156
MhlI	GDGCHC	4 cut(s)	28, 93, 568, 943
MlyI	GAGTC	2 cut(s)	89, 767
MmeI	TCCRAC	3 cut(s)	916, 1129, 1307
MroI	TCCGGA	1 cut(s)	926
MseI	TTAA	3 cut(s)	984, 1218, 1476
MslI	CAYNNNNRTG	1 cut(s)	585
MspA1I	CMGCKG	2 cut(s)	141, 482
MspCI	CTTAAG	1 cut(s)	983
MspI	CCGG	6 cut(s)	17, 128, 171, 278, 299, 927
MspR9I	CCNGG	5 cut(s)	116, 185, 191, 279, 1355
MunI	CAATTG	1 cut(s)	363
Mva1269I	GAATGC	1 cut(s)	475
MvaI	CCWGG	4 cut(s)	116, 185, 191, 1355
MvnI	CGCG	2 cut(s)	141, 1080
MwoI	GCNNNNNNNGC	7 cut(s)	59, 563, 596, 689, 938, 974, 988
NciI	CCSGG	1 cut(s)	279
NdeII	GATC	7 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360
NlaIII	CATG	5 cut(s)	418, 527, 769, 857, 962
NlaIV	GGNNCC	5 cut(s)	120, 208, 672, 952, 1158
NmeAIII	GCCGAG	1 cut(s)	862
NspI	RCATGY	1 cut(s)	769
PaeR7I	CTCGAG	1 cut(s)	92
PagI	TCATGA	1 cut(s)	523
PciSI	GCTCTTC	1 cut(s)	1037
PctI	GAATGC	1 cut(s)	475
PfeI	GAWTC	3 cut(s)	340, 658, 1349
PfoI	TCCNGGA	1 cut(s)	277
PinAI	ACCGGT	1 cut(s)	170
PleI	GAGTC	2 cut(s)	88, 767
PpsI	GAGTC	2 cut(s)	88, 767
PpuMI	RGGWCCY	1 cut(s)	118
PsiI	TTATAA	1 cut(s)	795
Psp124BI	GAGCTC	3 cut(s)	28, 93, 943
Psp5II	RGGWCCY	1 cut(s)	118
Psp6I	CCWGG	4 cut(s)	114, 183, 189, 1353
PspGI	CCWGG	4 cut(s)	114, 183, 189, 1353
PspN4I	GGNNCC	5 cut(s)	120, 208, 672, 952, 1158
PspPI	GGNCC	6 cut(s)	52, 118, 168, 187, 950, 1383
PspPPI	RGGWCCY	1 cut(s)	118
PspXI	VCTCGAGB	1 cut(s)	92
PsrI	GAACNNNNNNTAC	2 cut(s)	746, 778
PsuI	RGATCY	2 cut(s)	1004, 1156
PvuII	CAGCTG	1 cut(s)	482
RsaI	GTAC	6 cut(s)	241, 350, 388, 486, 546, 1085
RsaNI	GTAC	6 cut(s)	240, 349, 387, 485, 545, 1084
RseI	CAYNNNNRTG	1 cut(s)	585
SacI	GAGCTC	3 cut(s)	28, 93, 943
SacII	CCGCGG	1 cut(s)	142
SapI	GCTCTTC	1 cut(s)	1037
SaqAI	TTAA	3 cut(s)	984, 1218, 1476
Sau3AI	GATC	7 cut(s)	223, 274, 305, 1004, 1096, 1156, 1360
Sau96I	GGNCC	6 cut(s)	52, 118, 168, 187, 950, 1383
ScaI	AGTACT	1 cut(s)	388
SchI	GAGTC	2 cut(s)	89, 767
ScrFI	CCNGG	5 cut(s)	116, 185, 191, 279, 1355
SduI	GDGCHC	4 cut(s)	28, 93, 568, 943
SexAI	ACCWGGT	1 cut(s)	183
SfaNI	GCATC	6 cut(s)	517, 577, 895, 978, 1084, 1425
Sfr274I	CTCGAG	1 cut(s)	92
Sfr303I	CCGCGG	1 cut(s)	142
SgrBI	CCGCGG	1 cut(s)	142
SinI	GGWCC	4 cut(s)	118, 168, 187, 950
SlaI	CTCGAG	1 cut(s)	92
SmiMI	CAYNNNNRTG	1 cut(s)	585
SmlI	CTYRAG	2 cut(s)	92, 983
SmoI	CTYRAG	2 cut(s)	92, 983
SspMI	CTAG	4 cut(s)	770, 897, 1101, 1317
SstI	GAGCTC	3 cut(s)	28, 93, 943
StyD4I	CCNGG	5 cut(s)	114, 183, 189, 277, 1353
StyI	CCWWGG	1 cut(s)	777
TaaI	ACNGT	2 cut(s)	154, 211
TaqI	TCGA	4 cut(s)	5, 93, 304, 311
TatI	WGTACW	3 cut(s)	386, 544, 1083
TauI	GCSGC	4 cut(s)	36, 65, 68, 144
TfiI	GAWTC	3 cut(s)	340, 658, 1349
Tru1I	TTAA	3 cut(s)	984, 1218, 1476
Tru9I	TTAA	3 cut(s)	984, 1218, 1476
TscAI	CASTG	6 cut(s)	107, 226, 298, 922, 1167, 1346
TseI	GCWGC	6 cut(s)	683, 686, 689, 875, 878, 1193
TspDTI	ATGAA	6 cut(s)	826, 875, 947, 1018, 1146, 1485
TspGWI	ACGGA	2 cut(s)	670, 1301
TspRI	CASTG	6 cut(s)	107, 226, 298, 922, 1167, 1346
Vha464I	CTTAAG	1 cut(s)	983
VpaK11BI	GGWCC	4 cut(s)	118, 168, 187, 950
XapI	RAATTY	4 cut(s)	11, 424, 458, 1472
XceI	RCATGY	1 cut(s)	769
XhoI	CTCGAG	1 cut(s)	92
XspI	CTAG	4 cut(s)	770, 897, 1101, 1317
ZrmI	AGTACT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.