Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002449

Physical Location & Seq

Genomic Coordinates Reverse (-)

18846944 .. 18847835

Gene Structure 892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G45760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 624 bp

ATGTCGTATTCAACATTCAAAAGATCACTGGAGATTGAGGTAATCTCAGCGGAAGGACTCAAGGTAGATCGAAAACCATTGAAGAAGAAAACATACAGCGTTGTGAGAATCGATGAGAAATCTTGGGCTTCCAAAGTGGATGAACTAGGAGGGAGTTATCCAATTTGGAAAGATAGATTTGATATGGAGATGCCAATAAACGCAAGTGTAAGGTTTATATCCATTGAGGTTTACTATCGCACAAGTGGTAGTGGGAGGGACAAAAACGTAGGTTACGCCAAGATTCCGGTGACGGATTTCATGGGAGGTTTTGCTCCACAAGGGCATTTGAATTTCTTGAGTTACAGGTTGAGAGATGAGTATGGTGACAAATGCGGAATCGTCAATGTGTCTATCATGGTGAAACCTGACGGTAATGATCATAAATCATCGTTGCCGTCGTCGTCGTTTGCGGTGGCTCCGGTGGATTATGCTGCGTGTTCTTGGCAAGCTACGGCGGCGGCGAGGAATAATCAAATGTGGAGACCGAGGACATCTTCATCAATGGTTTCGACTGCTGGTTATGGTGGTGGTCGTGTAGTCACCGGCGTTCCTGTTTGGTGTGCGTATCAACGGCCGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0006950 GO:0008150 GO:0008289 GO:0009266 GO:0009408 GO:0009409 GO:0009611 GO:0009628 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0019725 GO:0031347 GO:0031348 GO:0042221 GO:0042493 GO:0042592 GO:0043167 GO:0043168 GO:0046677 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050896 GO:0065007 GO:0065008 GO:0080134 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

207

Amino Acids

22.99

Weight (kDa)

9.38

Isoelectric Point (pI)

33.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	9 - 102	6.6e-08	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002449)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45760 AT3G61190 AT3G61190
fragaria_vesca	FvH4_7g13400 FvH4_7g13410
malus_domestica	MD01G1049300.v1.1 MD01G1049600.v1.1 MD07G1126300.v1.1 MD07G1126400.v1.1 MD07G1126500.v1.1 MD07G1126600.v1.1
prunus_persica	Prupe.2G157300_v2.0.a1 Prupe.2G157400_v2.0.a1
pyrus_communis	pycom01g07440 pycom01g07460 pycom07g12070 pycom07g12110 pycom07g12220
rosa_chinensis	RchiOBHm_Chr1g0352721 RchiOBHm_Chr1g0352731 RchiOBHm_Chr1g0352741
rosa_laevigata	RLG00000028315 RLG00000028316
rosa_multiflora	Rmu_sc0006445.1_g000002 Rmu_sc0006445.1_g000003 Rmu_sc0006445.1_g000006
rosa_roxburghii	Rroxscaffold_4G00302390 Rroxscaffold_4G00302410
rosa_rugosa	Rorug01G0231500 Rorug01G0231600
rosa_samantha	Rh1AG244500 Rh1AG244600 Rh1AG244800 Rh1BG215300 Rh1BG215400 Rh1BG215500 Rh1CG228300 Rh1CG228600 Rh1DG241300 Rh1DG241400 Rh1DG241500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	5 cut(s)	50, 375, 452, 497, 500
AcoI	YGGCCR	1 cut(s)	614
AcsI	RAATTY	1 cut(s)	331
AgsI	TTSAA	4 cut(s)	12, 19, 82, 331
AluBI	AGCT	1 cut(s)	491
AluI	AGCT	1 cut(s)	491
Alw26I	GTCTC	1 cut(s)	517
AoxI	GGCC	1 cut(s)	614
ApeKI	GCWGC	1 cut(s)	473
ApoI	RAATTY	1 cut(s)	331
AsuHPI	GGTGA	4 cut(s)	301, 377, 412, 574
BarI	GAAGNNNNNNTAC	2 cut(s)	77, 109
BbvI	GCAGC	1 cut(s)	460
BceAI	ACGGC	3 cut(s)	421, 510, 601
BclI	TGATCA	1 cut(s)	418
BcoDI	GTCTC	1 cut(s)	517
BfaI	CTAG	1 cut(s)	146
BisI	GCNGC	3 cut(s)	474, 498, 501
BlsI	GCNGC	3 cut(s)	475, 499, 502
BmiI	GGNNCC	1 cut(s)	459
BmsI	GCATC	1 cut(s)	180
BplI	GAGNNNNNCTC	2 cut(s)	29, 61
BpmI	CTGGAG	1 cut(s)	50
BpuEI	CTTGAG	2 cut(s)	44, 358
Bsa29I	ATCGAT	1 cut(s)	111
BsaI	GGTCTC	1 cut(s)	517
BsaJI	CCNNGG	1 cut(s)	527
BsaWI	WCCGGW	2 cut(s)	286, 460
Bse118I	RCCGGY	1 cut(s)	584
Bse1I	ACTGG	1 cut(s)	33
BseCI	ATCGAT	1 cut(s)	111
BseDI	CCNNGG	1 cut(s)	527
BseGI	GGATG	1 cut(s)	145
BseMII	CTCAG	1 cut(s)	60
BseNI	ACTGG	1 cut(s)	33
BseX3I	CGGCCG	1 cut(s)	614
BseXI	GCAGC	1 cut(s)	460
Bsh1285I	CGRYCG	1 cut(s)	617
BshFI	GGCC	1 cut(s)	616
BshVI	ATCGAT	1 cut(s)	111
BsiEI	CGRYCG	1 cut(s)	617
BsiSI	CCGG	3 cut(s)	287, 461, 585
BslFI	GGGAC	1 cut(s)	272
BsmAI	GTCTC	1 cut(s)	517
BsmFI	GGGAC	1 cut(s)	272
BsnI	GGCC	1 cut(s)	616
Bso31I	GGTCTC	1 cut(s)	517
Bsp143I	GATC	3 cut(s)	23, 67, 418
BspACI	CCGC	5 cut(s)	50, 375, 452, 497, 500
BspANI	GGCC	1 cut(s)	616
BspCNI	CTCAG	1 cut(s)	59
BspDI	ATCGAT	1 cut(s)	111
BspLI	GGNNCC	1 cut(s)	459
BspTNI	GGTCTC	1 cut(s)	517
BsrFI	RCCGGY	1 cut(s)	584
BsrI	ACTGG	1 cut(s)	33
BssAI	RCCGGY	1 cut(s)	584
BssECI	CCNNGG	1 cut(s)	527
BssMI	GATC	3 cut(s)	23, 67, 418
Bst4CI	ACNGT	1 cut(s)	413
BstC8I	GCNNGC	1 cut(s)	489
BstDEI	CTNAG	1 cut(s)	46
BstF5I	GGATG	1 cut(s)	145
BstKTI	GATC	3 cut(s)	26, 70, 421
BstMAI	GTCTC	1 cut(s)	517
BstMBI	GATC	3 cut(s)	23, 67, 418
BstMCI	CGRYCG	1 cut(s)	617
BstMWI	GCNNNNNNNGC	1 cut(s)	497
BstV1I	GCAGC	1 cut(s)	460
BstZI	CGGCCG	1 cut(s)	614
Bsu15I	ATCGAT	1 cut(s)	111
BsuRI	GGCC	1 cut(s)	616
BsuTUI	ATCGAT	1 cut(s)	111
BtsCI	GGATG	1 cut(s)	145
BtsIMutI	CAGTG	1 cut(s)	26
Cac8I	GCNNGC	1 cut(s)	489
Cfr10I	RCCGGY	1 cut(s)	584
ClaI	ATCGAT	1 cut(s)	111
CviAII	CATG	2 cut(s)	301, 397
CviJI	RGCY	4 cut(s)	128, 458, 491, 616
CviKI_1	RGCY	4 cut(s)	128, 458, 491, 616
DdeI	CTNAG	1 cut(s)	46
DpnI	GATC	3 cut(s)	25, 69, 420
DpnII	GATC	3 cut(s)	23, 67, 418
EaeI	YGGCCR	1 cut(s)	614
EagI	CGGCCG	1 cut(s)	614
EclXI	CGGCCG	1 cut(s)	614
Eco31I	GGTCTC	1 cut(s)	517
Eco52I	CGGCCG	1 cut(s)	614
FaeI	CATG	2 cut(s)	304, 400
FaiI	YATR	9 cut(s)	94, 185, 218, 302, 363, 398, 423, 471, 564
FaqI	GGGAC	1 cut(s)	272
FatI	CATG	2 cut(s)	300, 396
FbaI	TGATCA	1 cut(s)	418
Fnu4HI	GCNGC	3 cut(s)	474, 498, 501
FokI	GGATG	1 cut(s)	152
Fsp4HI	GCNGC	3 cut(s)	474, 498, 501
FspBI	CTAG	1 cut(s)	146
GluI	GCNGC	3 cut(s)	474, 498, 501
GsuI	CTGGAG	1 cut(s)	50
HaeIII	GGCC	1 cut(s)	616
HapII	CCGG	3 cut(s)	287, 461, 585
Hin1II	CATG	2 cut(s)	304, 400
HinfI	GANTC	4 cut(s)	57, 108, 283, 378
HpaII	CCGG	3 cut(s)	287, 461, 585
HphI	GGTGA	4 cut(s)	301, 377, 412, 574
Hpy166II	GTNNAC	1 cut(s)	232
Hpy188III	TCNNGA	1 cut(s)	337
Hpy8I	GTNNAC	1 cut(s)	232
Hpy99I	CGWCG	3 cut(s)	442, 445, 448
HpyAV	CCTTC	1 cut(s)	47
HpyCH4III	ACNGT	1 cut(s)	413
HpyCH4IV	ACGT	1 cut(s)	267
HpyF10VI	GCNNNNNNNGC	1 cut(s)	497
HpyF3I	CTNAG	1 cut(s)	46
HpySE526I	ACGT	1 cut(s)	267
Hsp92II	CATG	2 cut(s)	304, 400
Ksp22I	TGATCA	1 cut(s)	418
Kzo9I	GATC	3 cut(s)	23, 67, 418
LmnI	GCTCC	2 cut(s)	319, 463
LpnPI	CCDG	8 cut(s)	14, 300, 331, 420, 474, 543, 598, 606
Lsp1109I	GCAGC	1 cut(s)	460
LweI	GCATC	1 cut(s)	180
MaeI	CTAG	1 cut(s)	146
MaeII	ACGT	1 cut(s)	267
MaeIII	GTNAC	5 cut(s)	272, 289, 341, 365, 580
MalI	GATC	3 cut(s)	25, 69, 420
MboI	GATC	3 cut(s)	23, 67, 418
MboII	GAAGA	3 cut(s)	94, 97, 528
MluCI	AATT	2 cut(s)	162, 331
MlyI	GAGTC	1 cut(s)	51
MnlI	CCTC	7 cut(s)	31, 143, 220, 249, 299, 498, 522
MseI	TTAA	1 cut(s)	622
MspA1I	CMGCKG	1 cut(s)	50
MspI	CCGG	3 cut(s)	287, 461, 585
MwoI	GCNNNNNNNGC	1 cut(s)	497
NdeII	GATC	3 cut(s)	23, 67, 418
NlaIII	CATG	2 cut(s)	304, 400
NlaIV	GGNNCC	1 cut(s)	459
NmuCI	GTSAC	3 cut(s)	289, 365, 580
PcsI	WCGNNNNNNNCGW	2 cut(s)	437, 500
PfeI	GAWTC	3 cut(s)	108, 283, 378
PkrI	GCNGC	3 cut(s)	475, 499, 502
PleI	GAGTC	1 cut(s)	51
PpsI	GAGTC	1 cut(s)	51
PspN4I	GGNNCC	1 cut(s)	459
SaqAI	TTAA	1 cut(s)	622
SatI	GCNGC	3 cut(s)	474, 498, 501
Sau3AI	GATC	3 cut(s)	23, 67, 418
SchI	GAGTC	1 cut(s)	51
SfaNI	GCATC	1 cut(s)	180
SgrAI	CRCCGGYG	1 cut(s)	584
SmlI	CTYRAG	2 cut(s)	59, 337
SmoI	CTYRAG	2 cut(s)	59, 337
Sse9I	AATT	2 cut(s)	162, 331
SsiI	CCGC	5 cut(s)	50, 375, 452, 497, 500
SspMI	CTAG	1 cut(s)	146
TaaI	ACNGT	1 cut(s)	413
TaiI	ACGT	1 cut(s)	270
TaqI	TCGA	3 cut(s)	70, 111, 551
TaqII	GACCGA	1 cut(s)	541
TasI	AATT	2 cut(s)	162, 331
TauI	GCSGC	2 cut(s)	500, 503
TfiI	GAWTC	3 cut(s)	108, 283, 378
Tru1I	TTAA	1 cut(s)	622
Tru9I	TTAA	1 cut(s)	622
TscAI	CASTG	1 cut(s)	33
TseFI	GTSAC	3 cut(s)	289, 365, 580
TseI	GCWGC	1 cut(s)	473
Tsp45I	GTSAC	3 cut(s)	289, 365, 580
TspDTI	ATGAA	3 cut(s)	156, 289, 528
TspGWI	ACGGA	1 cut(s)	308
TspRI	CASTG	1 cut(s)	33
XapI	RAATTY	1 cut(s)	331
XspI	CTAG	1 cut(s)	146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.