pycom07g12070

BON1-associated protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0002449
Physical Location & Seq
Forward (+)
13404756 .. 13405830
1075 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g12070.3

Sequence Viewer

Length: 849 bp
ATGTTTATTTTATTTTTTAAAACCCTTATAAAATATAAATTGTCATTGCAATTAGGGTATCCCCGCAATAAGAGGTGTGAATCCGTTAATTACATGAAAGTTTCTATCCTGAACAACTCAGAAACCCATTTTAAGGGCCAAAGTCAACTTGGAAAACCAAAGTGTACTTCGGCGCGTATATTTAGTTTATTAGTCCAATTTGAAATCCACGGAAACCAGGTGGCTGTTTCTCTCTCTTTTCCCACATCCTTCCCTCAACACTCCTATATAACCCCTCCCCACCCACACCCGTTTCCTCTCATCGCCACCATGGCAGCCAATTTCCGGACGCTCGAAATCACGGTGATCTCCGCTGAGAACCTGCAATTAAATCGAAAACCCATCAGCAAAAACACCTCCGTGACCGTCCGGACCGACACCAACAGCCAGTTTCGCACCACGGACATGGACACCGAAGGCGGCGCCTACCCACGGTGGAACGAGAAGCTCGTGCTCGACTTGCCAACGCACTCCAAGTCCATCACGGTGGAGGTCCAATGCCAAACTTCGTACGGCGTCAGGACGTTCGGGACGGCGACTATTCCGGCATCGGATTTTGTTGGCGGGTACGTGCCGGAGGGTTACCTGCATTTTCTGAGTTACAGGCTGAGAGATTACAAGGGGGAGAGGAACGGGATTATTAATATTTCTGTGAGGATGAAGGTTCCGGAGATGTACAGCTCTTGTGCAAGTTCAACGACGTCGTCTCCCTCGAGGATGGGGTTTCCGGCGGCTGGGAACAATAGTTTTGGTGGCAACATTGCGATCGGAGTTCCGGTTTGGTATGATGCCTATCAGAAAAATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2

Protein Analysis

283

Amino Acids

31.6

Weight (kDa)

9.5

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 29
AatII GACGTC 1 cut(s) 743
AbsI CCTCGAGG 1 cut(s) 751
Acc36I ACCTGC 2 cut(s) 369, 633
AccB1I GGYRCC 1 cut(s) 461
AccII CGCG 1 cut(s) 175
AccIII TCCGGA 3 cut(s) 324, 408, 706
AciI CCGC 5 cut(s) 64, 351, 459, 603, 770
AcyI GRCGYC 3 cut(s) 462, 555, 740
AfaI GTAC 4 cut(s) 166, 551, 608, 716
AfiI CCNNNNNNNGG 4 cut(s) 133, 324, 471, 773
AgsI TTSAA 2 cut(s) 203, 735
AjnI CCWGG 1 cut(s) 216
AjuI GAANNNNNNNTTGG 2 cut(s) 151, 183
AleI CACNNNNGTG 1 cut(s) 398
AluBI AGCT 2 cut(s) 487, 720
AluI AGCT 2 cut(s) 487, 720
Alw21I GWGCWC 1 cut(s) 495
Alw26I GTCTC 1 cut(s) 750
Ama87I CYCGRG 1 cut(s) 751
Aor13HI TCCGGA 3 cut(s) 324, 408, 706
AoxI GGCC 1 cut(s) 136
ApeKI GCWGC 1 cut(s) 314
AseI ATTAAT 1 cut(s) 681
AspLEI GCGC 2 cut(s) 175, 464
AspS9I GGNCC 3 cut(s) 136, 411, 532
AsuHPI GGTGA 1 cut(s) 355
AvaI CYCGRG 1 cut(s) 751
AvaII GGWCC 2 cut(s) 411, 532
BanI GGYRCC 1 cut(s) 461
BauI CACGAG 1 cut(s) 488
Bbv12I GWGCWC 1 cut(s) 495
BbvI GCAGC 1 cut(s) 326
BccI CCATC 3 cut(s) 389, 527, 751
BceAI ACGGC 2 cut(s) 568, 588
BcgI CGANNNNNNTGC 2 cut(s) 353, 387
BciT130I CCWGG 1 cut(s) 218
BciVI GTATCC 1 cut(s) 69
BcoDI GTCTC 1 cut(s) 750
BfoI RGCGCY 1 cut(s) 465
BfuAI ACCTGC 2 cut(s) 369, 633
BfuI GTATCC 1 cut(s) 69
BglI GCCNNNNNGGC 1 cut(s) 311
BisI GCNGC 3 cut(s) 315, 460, 771
BlsI GCNGC 3 cut(s) 316, 461, 772
Bme1390I CCNGG 1 cut(s) 218
Bme18I GGWCC 2 cut(s) 411, 532
BmeT110I CYCGRG 1 cut(s) 751
BmgT120I GGNCC 3 cut(s) 136, 411, 532
BmiI GGNNCC 2 cut(s) 463, 705
BmrFI CCNGG 1 cut(s) 218
BmsI GCATC 2 cut(s) 596, 817
BsaAI YACGTR 1 cut(s) 610
BsaBI GATNNNNATC 1 cut(s) 831
BsaHI GRCGYC 3 cut(s) 462, 555, 740
BsaJI CCNNGG 4 cut(s) 208, 309, 438, 470
BsaWI WCCGGW 4 cut(s) 324, 408, 706, 814
BsaXI ACNNNNNCTCC 4 cut(s) 730, 760, 801, 831
Bsc4I CCNNNNNNNGG 4 cut(s) 133, 324, 471, 773
Bse1I ACTGG 1 cut(s) 427
Bse3DI GCAATG 2 cut(s) 44, 798
Bse8I GATNNNNATC 1 cut(s) 831
BseAI TCCGGA 3 cut(s) 324, 408, 706
BseBI CCWGG 1 cut(s) 218
BseDI CCNNGG 4 cut(s) 208, 309, 438, 470
BseGI GGATG 3 cut(s) 245, 702, 762
BseJI GATNNNNATC 1 cut(s) 831
BseLI CCNNNNNNNGG 4 cut(s) 133, 324, 471, 773
BseMI GCAATG 2 cut(s) 44, 798
BseMII CTCAG 4 cut(s) 132, 345, 626, 638
BseNI ACTGG 1 cut(s) 427
BseXI GCAGC 1 cut(s) 326
BseYI CCCAGC 1 cut(s) 773
Bsh1236I CGCG 1 cut(s) 175
Bsh1285I CGRYCG 1 cut(s) 807
BshFI GGCC 1 cut(s) 138
BshNI GGYRCC 1 cut(s) 461
BsiEI CGRYCG 1 cut(s) 807
BsiHKAI GWGCWC 1 cut(s) 495
BsiHKCI CYCGRG 1 cut(s) 751
BsiSI CCGG 7 cut(s) 325, 409, 584, 614, 707, 767, 815
BsiWI CGTACG 1 cut(s) 549
BslFI GGGAC 1 cut(s) 583
BslI CCNNNNNNNGG 4 cut(s) 133, 324, 471, 773
BsmAI GTCTC 1 cut(s) 750
BsmBI CGTCTC 1 cut(s) 750
BsmFI GGGAC 1 cut(s) 583
BsnI GGCC 1 cut(s) 138
BsoBI CYCGRG 1 cut(s) 751
Bsp1286I GDGCHC 1 cut(s) 495
Bsp13I TCCGGA 3 cut(s) 324, 408, 706
Bsp1407I TGTACA 1 cut(s) 714
Bsp143I GATC 2 cut(s) 345, 804
Bsp19I CCATGG 1 cut(s) 309
BspACI CCGC 5 cut(s) 64, 351, 459, 603, 770
BspANI GGCC 1 cut(s) 138
BspCNI CTCAG 4 cut(s) 131, 346, 627, 639
BspEI TCCGGA 3 cut(s) 324, 408, 706
BspFNI CGCG 1 cut(s) 175
BspLI GGNNCC 2 cut(s) 463, 705
BspMI ACCTGC 2 cut(s) 369, 633
BspT107I GGYRCC 1 cut(s) 461
BsrDI GCAATG 2 cut(s) 44, 798
BsrGI TGTACA 1 cut(s) 714
BsrI ACTGG 1 cut(s) 427
BssECI CCNNGG 4 cut(s) 208, 309, 438, 470
BssMI GATC 2 cut(s) 345, 804
BssNI GRCGYC 3 cut(s) 462, 555, 740
BssSI CACGAG 1 cut(s) 488
BssT1I CCWWGG 1 cut(s) 309
Bst2BI CACGAG 1 cut(s) 488
Bst2UI CCWGG 1 cut(s) 218
Bst4CI ACNGT 4 cut(s) 343, 406, 474, 526
BstACI GRCGYC 3 cut(s) 462, 555, 740
BstAUI TGTACA 1 cut(s) 714
BstBAI YACGTR 1 cut(s) 610
BstDEI CTNAG 4 cut(s) 118, 354, 635, 647
BstDSI CCRYGG 4 cut(s) 208, 309, 438, 470
BstEII GGTNACC 1 cut(s) 620
BstF5I GGATG 3 cut(s) 245, 702, 762
BstFNI CGCG 1 cut(s) 175
BstH2I RGCGCY 1 cut(s) 465
BstHHI GCGC 2 cut(s) 175, 464
BstKTI GATC 2 cut(s) 348, 807
BstMAI GTCTC 1 cut(s) 750
BstMBI GATC 2 cut(s) 345, 804
BstMCI CGRYCG 1 cut(s) 807
BstMWI GCNNNNNNNGC 3 cut(s) 311, 432, 499
BstNI CCWGG 1 cut(s) 218
BstPI GGTNACC 1 cut(s) 620
BstSCI CCNGG 1 cut(s) 216
BstUI CGCG 1 cut(s) 175
BstV1I GCAGC 1 cut(s) 326
BstXI CCANNNNNNTGG 2 cut(s) 445, 526
BsuI GTATCC 1 cut(s) 69
BsuRI GGCC 1 cut(s) 138
BtgI CCRYGG 4 cut(s) 208, 309, 438, 470
BtgZI GCGATG 1 cut(s) 286
BtsCI GGATG 3 cut(s) 245, 702, 762
BveI ACCTGC 2 cut(s) 369, 633
CfoI GCGC 2 cut(s) 175, 464
Cfr13I GGNCC 3 cut(s) 136, 411, 532
CpoI CGGWCCG 1 cut(s) 411
CseI GACGC 2 cut(s) 337, 544
CsiI ACCWGGT 1 cut(s) 216
Csp6I GTAC 4 cut(s) 165, 550, 607, 715
CspI CGGWCCG 1 cut(s) 411
CviAII CATG 3 cut(s) 94, 310, 445
CviJI RGCY 8 cut(s) 138, 224, 317, 426, 487, 646, 720, 773
CviKI_1 RGCY 8 cut(s) 138, 224, 317, 426, 487, 646, 720, 773
CviQI GTAC 4 cut(s) 165, 550, 607, 715
DdeI CTNAG 4 cut(s) 118, 354, 635, 647
DinI GGCGCC 1 cut(s) 463
DpnI GATC 2 cut(s) 347, 806
DpnII GATC 2 cut(s) 345, 804
DraI TTTAAA 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 309
Eco47I GGWCC 2 cut(s) 411, 532
Eco88I CYCGRG 1 cut(s) 751
Eco91I GGTNACC 1 cut(s) 620
EcoO65I GGTNACC 1 cut(s) 620
EcoRII CCWGG 1 cut(s) 216
EcoT14I CCWWGG 1 cut(s) 309
EgeI GGCGCC 1 cut(s) 463
EheI GGCGCC 1 cut(s) 463
ErhI CCWWGG 1 cut(s) 309
Esp3I CGTCTC 1 cut(s) 750
FaeI CATG 3 cut(s) 97, 313, 448
FaiI YATR 9 cut(s) 29, 36, 95, 179, 267, 269, 311, 446, 825
FaqI GGGAC 1 cut(s) 583
FatI CATG 3 cut(s) 93, 309, 444
FauI CCCGC 2 cut(s) 71, 596
Fnu4HI GCNGC 3 cut(s) 315, 460, 771
FokI GGATG 3 cut(s) 232, 709, 769
Fsp4HI GCNGC 3 cut(s) 315, 460, 771
GlaI GCGC 2 cut(s) 174, 463
GluI GCNGC 3 cut(s) 315, 460, 771
GsaI CCCAGC 1 cut(s) 777
HaeII RGCGCY 1 cut(s) 465
HaeIII GGCC 1 cut(s) 138
HapII CCGG 7 cut(s) 325, 409, 584, 614, 707, 767, 815
HgaI GACGC 2 cut(s) 337, 544
HhaI GCGC 2 cut(s) 175, 464
Hin1I GRCGYC 3 cut(s) 462, 555, 740
Hin1II CATG 3 cut(s) 97, 313, 448
Hin6I GCGC 2 cut(s) 173, 462
HinP1I GCGC 2 cut(s) 173, 462
HincII GTYRAC 1 cut(s) 146
HindII GTYRAC 1 cut(s) 146
HinfI GANTC 1 cut(s) 80
HpaII CCGG 7 cut(s) 325, 409, 584, 614, 707, 767, 815
HphI GGTGA 1 cut(s) 355
Hpy166II GTNNAC 2 cut(s) 146, 165
Hpy188I TCNGA 5 cut(s) 121, 592, 636, 809, 837
Hpy188III TCNNGA 6 cut(s) 109, 325, 409, 559, 568, 707
Hpy8I GTNNAC 2 cut(s) 146, 165
Hpy99I CGWCG 2 cut(s) 742, 745
HpyAV CCTTC 3 cut(s) 259, 449, 694
HpyCH4III ACNGT 4 cut(s) 343, 406, 474, 526
HpyCH4IV ACGT 3 cut(s) 563, 609, 740
HpyCH4V TGCA 4 cut(s) 49, 364, 628, 728
HpyF10VI GCNNNNNNNGC 3 cut(s) 311, 432, 499
HpyF3I CTNAG 4 cut(s) 118, 354, 635, 647
HpySE526I ACGT 3 cut(s) 563, 609, 740
Hsp92I GRCGYC 3 cut(s) 462, 555, 740
Hsp92II CATG 3 cut(s) 97, 313, 448
HspAI GCGC 2 cut(s) 173, 462
KasI GGCGCC 1 cut(s) 461
Kpn2I TCCGGA 3 cut(s) 324, 408, 706
Kzo9I GATC 2 cut(s) 345, 804
Lsp1109I GCAGC 1 cut(s) 326
LweI GCATC 2 cut(s) 596, 817
MabI ACCWGGT 1 cut(s) 216
MaeII ACGT 3 cut(s) 563, 609, 740
MaeIII GTNAC 3 cut(s) 400, 620, 638
MalI GATC 2 cut(s) 347, 806
MboI GATC 2 cut(s) 345, 804
MhlI GDGCHC 1 cut(s) 495
MluCI AATT 7 cut(s) 38, 50, 88, 197, 319, 365, 841
Mly113I GGCGCC 1 cut(s) 462
MroI TCCGGA 3 cut(s) 324, 408, 706
MseI TTAA 5 cut(s) 18, 87, 132, 368, 681
MslI CAYNNNNRTG 3 cut(s) 398, 443, 524
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 7 cut(s) 325, 409, 584, 614, 707, 767, 815
MspR9I CCNGG 1 cut(s) 218
MvaI CCWGG 1 cut(s) 218
MvnI CGCG 1 cut(s) 175
MwoI GCNNNNNNNGC 3 cut(s) 311, 432, 499
NarI GGCGCC 1 cut(s) 462
NcoI CCATGG 1 cut(s) 309
NdeII GATC 2 cut(s) 345, 804
NlaIII CATG 3 cut(s) 97, 313, 448
NlaIV GGNNCC 2 cut(s) 463, 705
NmuCI GTSAC 1 cut(s) 400
OliI CACNNNNGTG 1 cut(s) 398
PaeR7I CTCGAG 1 cut(s) 751
PcsI WCGNNNNNNNCGW 2 cut(s) 486, 749
PfeI GAWTC 1 cut(s) 80
Pfl23II CGTACG 1 cut(s) 549
PflFI GACNNNGTC 1 cut(s) 742
PkrI GCNGC 3 cut(s) 316, 461, 772
Ple19I CGATCG 1 cut(s) 807
PluTI GGCGCC 1 cut(s) 465
Ppu21I YACGTR 1 cut(s) 610
PshBI ATTAAT 1 cut(s) 681
PsiI TTATAA 1 cut(s) 29
Psp6I CCWGG 1 cut(s) 216
PspEI GGTNACC 1 cut(s) 620
PspFI CCCAGC 1 cut(s) 773
PspGI CCWGG 1 cut(s) 216
PspLI CGTACG 1 cut(s) 549
PspN4I GGNNCC 2 cut(s) 463, 705
PspPI GGNCC 3 cut(s) 136, 411, 532
PspXI VCTCGAGB 1 cut(s) 751
PsyI GACNNNGTC 1 cut(s) 742
PvuI CGATCG 1 cut(s) 807
RsaI GTAC 4 cut(s) 166, 551, 608, 716
RsaNI GTAC 4 cut(s) 165, 550, 607, 715
RseI CAYNNNNRTG 3 cut(s) 398, 443, 524
Rsr2I CGGWCCG 1 cut(s) 411
RsrII CGGWCCG 1 cut(s) 411
SaqAI TTAA 5 cut(s) 18, 87, 132, 368, 681
SatI GCNGC 3 cut(s) 315, 460, 771
Sau3AI GATC 2 cut(s) 345, 804
Sau96I GGNCC 3 cut(s) 136, 411, 532
ScrFI CCNGG 1 cut(s) 218
SduI GDGCHC 1 cut(s) 495
SexAI ACCWGGT 1 cut(s) 216
SfaNI GCATC 2 cut(s) 596, 817
SfoI GGCGCC 1 cut(s) 463
Sfr274I CTCGAG 1 cut(s) 751
SinI GGWCC 2 cut(s) 411, 532
SlaI CTCGAG 1 cut(s) 751
SmiMI CAYNNNNRTG 3 cut(s) 398, 443, 524
SmlI CTYRAG 1 cut(s) 751
SmoI CTYRAG 1 cut(s) 751
Sse9I AATT 7 cut(s) 38, 50, 88, 197, 319, 365, 841
SsiI CCGC 5 cut(s) 64, 351, 459, 603, 770
SspDI GGCGCC 1 cut(s) 461
SspI AATATT 1 cut(s) 685
StyD4I CCNGG 1 cut(s) 216
StyI CCWWGG 1 cut(s) 309
TaaI ACNGT 4 cut(s) 343, 406, 474, 526
TaiI ACGT 3 cut(s) 566, 612, 743
TaqI TCGA 4 cut(s) 333, 373, 495, 752
TaqII GACCGA 1 cut(s) 428
TasI AATT 7 cut(s) 38, 50, 88, 197, 319, 365, 841
TatI WGTACW 2 cut(s) 164, 714
TauI GCSGC 2 cut(s) 462, 773
TfiI GAWTC 1 cut(s) 80
Tru1I TTAA 5 cut(s) 18, 87, 132, 368, 681
Tru9I TTAA 5 cut(s) 18, 87, 132, 368, 681
TseFI GTSAC 1 cut(s) 400
TseI GCWGC 1 cut(s) 314
Tsp45I GTSAC 1 cut(s) 400
TspDTI ATGAA 2 cut(s) 110, 713
TspGWI ACGGA 4 cut(s) 73, 225, 388, 455
Tth111I GACNNNGTC 1 cut(s) 742
VpaK11BI GGWCC 2 cut(s) 411, 532
VspI ATTAAT 1 cut(s) 681
XcmI CCANNNNNNNNNTGG 1 cut(s) 146
XhoI CTCGAG 1 cut(s) 751
ZraI GACGTC 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.