Prupe.2G157300_v2.0.a1

BON1-associated protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0002449
Physical Location & Seq
Reverse (-)
21056385 .. 21058129
1745 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G157300.1

Sequence Viewer

Length: 531 bp
ATGGCAGCAACGTCCCGGAAGCTAGAAATCACGGTCATATCCGCCGAGAACTTGCAATTAGATAGAAAACCCATCAAGAAAAACGCCTCTGCTACCGTCCGCGCCGAAAATGACAGCCAGTTTCTTACCACGGACACGGACACGGAAGGCGGCGCCTACCCCAAATGGAACGAGAAGCTTGTGCTCGACTTGCCAATGCAGGCGAGGTCCTTGACGGTGGAGGTTCAATGCAAGACTTCTTACGGCCTCAGGACAATCGGAACGGCGAAGATTCCGGTGTCAGATTTCGTGGGTGGGTTTGTGCCTGAGGGCTACCTGCATTTTTTGAGTTACAGACTGAGAGACCGCAGGGGAGAGAGGAACGGGATTGTGAATATTTCAGTGAGGATGAAGGTGCCGGAGTTGAAAGCGTGTGCTACGACGTCGTCCCATTCGAGCGTGGGATTTCCGGTGGGAGATAGCAGCTTTGGCGTCGGTGGCGTGGCGACTGGAATTCCGGTTTGGTGCGGGGCGTATCCGAGAAATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2

Protein Analysis

177

Amino Acids

19.17

Weight (kDa)

9.19

Isoelectric Point (pI)

32.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 425
Acc36I ACCTGC 1 cut(s) 324
AccB1I GGYRCC 2 cut(s) 152, 394
AccII CGCG 1 cut(s) 102
AciI CCGC 5 cut(s) 42, 100, 150, 346, 507
AcsI RAATTY 1 cut(s) 492
AcyI GRCGYC 3 cut(s) 153, 422, 471
AgsI TTSAA 2 cut(s) 227, 406
AjuI GAANNNNNNNTTGG 2 cut(s) 484, 516
AluBI AGCT 3 cut(s) 22, 178, 465
AluI AGCT 3 cut(s) 22, 178, 465
Alw21I GWGCWC 1 cut(s) 186
Alw26I GTCTC 1 cut(s) 336
AoxI GGCC 1 cut(s) 244
ApeKI GCWGC 2 cut(s) 5, 462
ApoI RAATTY 1 cut(s) 492
AspLEI GCGC 2 cut(s) 104, 155
AspS9I GGNCC 1 cut(s) 207
AsuC2I CCSGG 1 cut(s) 16
AvaII GGWCC 1 cut(s) 207
AxyI CCTNAGG 2 cut(s) 248, 306
BanI GGYRCC 2 cut(s) 152, 394
Bbv12I GWGCWC 1 cut(s) 186
BbvI GCAGC 2 cut(s) 17, 474
BccI CCATC 1 cut(s) 80
BceAI ACGGC 2 cut(s) 259, 279
BciVI GTATCC 1 cut(s) 525
BcnI CCSGG 1 cut(s) 16
BcoDI GTCTC 1 cut(s) 336
BfaI CTAG 1 cut(s) 23
BfoI RGCGCY 1 cut(s) 156
BfuAI ACCTGC 1 cut(s) 324
BfuI GTATCC 1 cut(s) 525
BisI GCNGC 3 cut(s) 6, 151, 463
BlsI GCNGC 3 cut(s) 7, 152, 464
Bme1390I CCNGG 1 cut(s) 16
Bme18I GGWCC 1 cut(s) 207
BmgT120I GGNCC 1 cut(s) 207
BmiI GGNNCC 2 cut(s) 154, 396
BmrFI CCNGG 1 cut(s) 16
BpuMI CCSGG 1 cut(s) 16
BsaHI GRCGYC 3 cut(s) 153, 422, 471
BsaI GGTCTC 1 cut(s) 336
BsaJI CCNNGG 1 cut(s) 129
BsaWI WCCGGW 3 cut(s) 274, 448, 496
Bse1I ACTGG 2 cut(s) 118, 493
Bse21I CCTNAGG 2 cut(s) 248, 306
BseDI CCNNGG 1 cut(s) 129
BseGI GGATG 1 cut(s) 393
BseMII CTCAG 3 cut(s) 262, 297, 329
BseNI ACTGG 2 cut(s) 118, 493
BseXI GCAGC 2 cut(s) 17, 474
Bsh1236I CGCG 1 cut(s) 102
BshFI GGCC 1 cut(s) 246
BshNI GGYRCC 2 cut(s) 152, 394
BsiHKAI GWGCWC 1 cut(s) 186
BsiSI CCGG 5 cut(s) 16, 275, 398, 449, 497
BslFI GGGAC 1 cut(s) 412
BsmAI GTCTC 1 cut(s) 336
BsmFI GGGAC 1 cut(s) 412
BsnI GGCC 1 cut(s) 246
Bso31I GGTCTC 1 cut(s) 336
Bsp1286I GDGCHC 1 cut(s) 186
BspACI CCGC 5 cut(s) 42, 100, 150, 346, 507
BspANI GGCC 1 cut(s) 246
BspCNI CTCAG 3 cut(s) 261, 298, 330
BspFNI CGCG 1 cut(s) 102
BspLI GGNNCC 2 cut(s) 154, 396
BspMI ACCTGC 1 cut(s) 324
BspT107I GGYRCC 2 cut(s) 152, 394
BspTNI GGTCTC 1 cut(s) 336
BsrI ACTGG 2 cut(s) 118, 493
BssECI CCNNGG 1 cut(s) 129
BssNI GRCGYC 3 cut(s) 153, 422, 471
Bst4CI ACNGT 3 cut(s) 34, 97, 217
BstACI GRCGYC 3 cut(s) 153, 422, 471
BstC8I GCNNGC 1 cut(s) 201
BstDEI CTNAG 3 cut(s) 248, 306, 338
BstDSI CCRYGG 1 cut(s) 129
BstF5I GGATG 1 cut(s) 393
BstFNI CGCG 1 cut(s) 102
BstH2I RGCGCY 1 cut(s) 156
BstHHI GCGC 2 cut(s) 104, 155
BstMAI GTCTC 1 cut(s) 336
BstMWI GCNNNNNNNGC 3 cut(s) 190, 468, 477
BstSCI CCNGG 1 cut(s) 14
BstUI CGCG 1 cut(s) 102
BstV1I GCAGC 2 cut(s) 17, 474
Bsu36I CCTNAGG 2 cut(s) 248, 306
BsuI GTATCC 1 cut(s) 525
BsuRI GGCC 1 cut(s) 246
BtgI CCRYGG 1 cut(s) 129
BtsCI GGATG 1 cut(s) 393
BtsIMutI CAGTG 1 cut(s) 387
BveI ACCTGC 1 cut(s) 324
Cac8I GCNNGC 1 cut(s) 201
CfoI GCGC 2 cut(s) 104, 155
Cfr13I GGNCC 1 cut(s) 207
CseI GACGC 1 cut(s) 460
CviJI RGCY 6 cut(s) 22, 117, 178, 246, 312, 465
CviKI_1 RGCY 6 cut(s) 22, 117, 178, 246, 312, 465
DdeI CTNAG 3 cut(s) 248, 306, 338
DinI GGCGCC 1 cut(s) 154
EciI GGCGGA 1 cut(s) 31
Eco31I GGTCTC 1 cut(s) 336
Eco47I GGWCC 1 cut(s) 207
Eco81I CCTNAGG 2 cut(s) 248, 306
EcoO109I RGGNCCY 1 cut(s) 207
EcoRI GAATTC 1 cut(s) 492
EgeI GGCGCC 1 cut(s) 154
EheI GGCGCC 1 cut(s) 154
FaiI YATR 1 cut(s) 38
FaqI GGGAC 1 cut(s) 412
FauI CCCGC 1 cut(s) 500
Fnu4HI GCNGC 3 cut(s) 6, 151, 463
FokI GGATG 1 cut(s) 400
Fsp4HI GCNGC 3 cut(s) 6, 151, 463
FspBI CTAG 1 cut(s) 23
GlaI GCGC 2 cut(s) 103, 154
GluI GCNGC 3 cut(s) 6, 151, 463
HaeII RGCGCY 1 cut(s) 156
HaeIII GGCC 1 cut(s) 246
HapII CCGG 5 cut(s) 16, 275, 398, 449, 497
HgaI GACGC 1 cut(s) 460
HhaI GCGC 2 cut(s) 104, 155
Hin1I GRCGYC 3 cut(s) 153, 422, 471
Hin6I GCGC 2 cut(s) 102, 153
HinP1I GCGC 2 cut(s) 102, 153
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 1 cut(s) 271
HpaII CCGG 5 cut(s) 16, 275, 398, 449, 497
Hpy188I TCNGA 3 cut(s) 260, 283, 519
Hpy188III TCNNGA 2 cut(s) 76, 250
Hpy99I CGWCG 3 cut(s) 424, 427, 476
HpyAV CCTTC 2 cut(s) 140, 385
HpyCH4III ACNGT 3 cut(s) 34, 97, 217
HpyCH4IV ACGT 2 cut(s) 11, 422
HpyCH4V TGCA 4 cut(s) 55, 199, 231, 319
HpyF10VI GCNNNNNNNGC 3 cut(s) 190, 468, 477
HpyF3I CTNAG 3 cut(s) 248, 306, 338
HpySE526I ACGT 2 cut(s) 11, 422
Hsp92I GRCGYC 3 cut(s) 153, 422, 471
HspAI GCGC 2 cut(s) 102, 153
KasI GGCGCC 1 cut(s) 152
Lsp1109I GCAGC 2 cut(s) 17, 474
MaeI CTAG 1 cut(s) 23
MaeII ACGT 2 cut(s) 11, 422
MaeIII GTNAC 1 cut(s) 329
MboII GAAGA 1 cut(s) 280
MhlI GDGCHC 1 cut(s) 186
MluCI AATT 3 cut(s) 56, 492, 523
Mly113I GGCGCC 1 cut(s) 153
MnlI CCTC 7 cut(s) 97, 198, 214, 257, 301, 351, 378
MspI CCGG 5 cut(s) 16, 275, 398, 449, 497
MspR9I CCNGG 1 cut(s) 16
MvnI CGCG 1 cut(s) 102
MwoI GCNNNNNNNGC 3 cut(s) 190, 468, 477
NarI GGCGCC 1 cut(s) 153
NciI CCSGG 1 cut(s) 16
NlaIV GGNNCC 2 cut(s) 154, 396
NmeAIII GCCGAG 1 cut(s) 70
PcsI WCGNNNNNNNCGW 1 cut(s) 431
PfeI GAWTC 1 cut(s) 271
PflFI GACNNNGTC 1 cut(s) 424
PfoI TCCNGGA 1 cut(s) 14
PkrI GCNGC 3 cut(s) 7, 152, 464
PluTI GGCGCC 1 cut(s) 156
PpuMI RGGWCCY 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 207
PspN4I GGNNCC 2 cut(s) 154, 396
PspPI GGNCC 1 cut(s) 207
PspPPI RGGWCCY 1 cut(s) 207
PsyI GACNNNGTC 1 cut(s) 424
SatI GCNGC 3 cut(s) 6, 151, 463
Sau96I GGNCC 1 cut(s) 207
ScrFI CCNGG 1 cut(s) 16
SduI GDGCHC 1 cut(s) 186
SetI ASST 9 cut(s) 14, 24, 180, 209, 225, 318, 396, 425, 467
SfoI GGCGCC 1 cut(s) 154
SinI GGWCC 1 cut(s) 207
Sse9I AATT 3 cut(s) 56, 492, 523
SsiI CCGC 5 cut(s) 42, 100, 150, 346, 507
SspDI GGCGCC 1 cut(s) 152
SspI AATATT 1 cut(s) 376
SspMI CTAG 1 cut(s) 23
StyD4I CCNGG 1 cut(s) 14
TaaI ACNGT 3 cut(s) 34, 97, 217
TaiI ACGT 2 cut(s) 14, 425
TaqI TCGA 2 cut(s) 186, 434
TasI AATT 3 cut(s) 56, 492, 523
TauI GCSGC 1 cut(s) 153
TfiI GAWTC 1 cut(s) 271
TscAI CASTG 1 cut(s) 387
TseI GCWGC 2 cut(s) 5, 462
TspDTI ATGAA 1 cut(s) 404
TspGWI ACGGA 3 cut(s) 146, 152, 158
TspRI CASTG 1 cut(s) 387
Tth111I GACNNNGTC 1 cut(s) 424
VpaK11BI GGWCC 1 cut(s) 207
XapI RAATTY 1 cut(s) 492
XspI CTAG 1 cut(s) 23
ZraI GACGTC 1 cut(s) 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.