Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002449

Physical Location & Seq

Genomic Coordinates Reverse (-)

21059991 .. 21060521

Gene Structure 531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G157400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 531 bp

ATGGCAACAACGTCCCGGAAGCTAGAAATCAGAGTCATATCCGCCGAGAACTTGCAATTAGATCGAAAACCCATCAAGAAAAACGCCTCTGCGACTGTCCGGGCCGAAAAGGACAGCCAGTTTCGCACCACTTACATGGACACCGAAGGCGGCGCCTACCCCAAATGGAACGAGAAGCTTGTGCTCGACTTGCCATTGCATGCGAGGTCCTTCACGGTGGAGATTCAATGCAAGACTTCTTACGGAGTCAGGACGATCGGAACGGCAAAGATTCCGGTGTCGGATTTCGTGGGCGGGTTTGTGCCTGAGGGCTACCTGCATTTTTTGAGTTACAGACTGAGAGATAACAGGGGAGAGAGAAACGGGATTGTTAATATTTCGGTGAGGATGCAGGTGCCAGAGTTGAAAGCATGTGCTACGACGTCGTCTCATTCGAGCATGGGATTTCCCGTGGGAGATAGCAGCTTTGGCGGCGGTGGCGTGGCGACTGGAGTTCCCGTTTGGTACGGGGCGTATCAGAAAAATTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

177

Amino Acids

19.42

Weight (kDa)

9.49

Isoelectric Point (pI)

35.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002449)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45760 AT3G61190 AT3G61190
fragaria_vesca	FvH4_7g13400 FvH4_7g13410
malus_domestica	MD01G1049300.v1.1 MD01G1049600.v1.1 MD07G1126300.v1.1 MD07G1126400.v1.1 MD07G1126500.v1.1 MD07G1126600.v1.1
prunus_persica	Prupe.2G157300_v2.0.a1 Prupe.2G157400_v2.0.a1
pyrus_communis	pycom01g07440 pycom01g07460 pycom07g12070 pycom07g12110 pycom07g12220
rosa_chinensis	RchiOBHm_Chr1g0352721 RchiOBHm_Chr1g0352731 RchiOBHm_Chr1g0352741
rosa_laevigata	RLG00000028315 RLG00000028316
rosa_multiflora	Rmu_sc0006445.1_g000002 Rmu_sc0006445.1_g000003 Rmu_sc0006445.1_g000006
rosa_roxburghii	Rroxscaffold_4G00302390 Rroxscaffold_4G00302410
rosa_rugosa	Rorug01G0231500 Rorug01G0231600
rosa_samantha	Rh1AG244500 Rh1AG244600 Rh1AG244800 Rh1BG215300 Rh1BG215400 Rh1BG215500 Rh1CG228300 Rh1CG228600 Rh1DG241300 Rh1DG241400 Rh1DG241500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	382
AatII	GACGTC	1 cut(s)	425
Acc36I	ACCTGC	2 cut(s)	324, 382
AccB1I	GGYRCC	2 cut(s)	152, 394
AciI	CCGC	5 cut(s)	42, 150, 294, 471, 474
AcyI	GRCGYC	2 cut(s)	153, 422
AfaI	GTAC	1 cut(s)	506
AgsI	TTSAA	2 cut(s)	227, 406
AluBI	AGCT	3 cut(s)	22, 178, 465
AluI	AGCT	3 cut(s)	22, 178, 465
Alw21I	GWGCWC	1 cut(s)	186
Alw26I	GTCTC	1 cut(s)	432
AoxI	GGCC	1 cut(s)	102
ApeKI	GCWGC	1 cut(s)	462
AspLEI	GCGC	1 cut(s)	155
AspS9I	GGNCC	2 cut(s)	102, 207
AsuC2I	CCSGG	2 cut(s)	16, 101
AsuHPI	GGTGA	1 cut(s)	394
AvaII	GGWCC	1 cut(s)	207
AxyI	CCTNAGG	1 cut(s)	306
BanI	GGYRCC	2 cut(s)	152, 394
Bbv12I	GWGCWC	1 cut(s)	186
BbvI	GCAGC	1 cut(s)	474
BccI	CCATC	1 cut(s)	80
BceAI	ACGGC	1 cut(s)	279
BcgI	CGANNNNNNTGC	2 cut(s)	44, 78
BcnI	CCSGG	2 cut(s)	16, 101
BcoDI	GTCTC	1 cut(s)	432
BfaI	CTAG	1 cut(s)	23
BfoI	RGCGCY	1 cut(s)	156
BfuAI	ACCTGC	2 cut(s)	324, 382
BisI	GCNGC	3 cut(s)	151, 463, 472
BlsI	GCNGC	3 cut(s)	152, 464, 473
Bme1390I	CCNGG	2 cut(s)	16, 101
Bme18I	GGWCC	1 cut(s)	207
BmgT120I	GGNCC	2 cut(s)	102, 207
BmiI	GGNNCC	2 cut(s)	154, 396
BmrFI	CCNGG	2 cut(s)	16, 101
BmsI	GCATC	1 cut(s)	378
BpmI	CTGGAG	1 cut(s)	510
BpuMI	CCSGG	2 cut(s)	16, 101
BsaHI	GRCGYC	2 cut(s)	153, 422
BsaJI	CCNNGG	1 cut(s)	450
BsaWI	WCCGGW	1 cut(s)	274
BsaXI	ACNNNNNCTCC	2 cut(s)	483, 513
Bse1I	ACTGG	2 cut(s)	118, 493
Bse21I	CCTNAGG	1 cut(s)	306
Bse3DI	GCAATG	1 cut(s)	194
BseDI	CCNNGG	1 cut(s)	450
BseGI	GGATG	1 cut(s)	393
BseMI	GCAATG	1 cut(s)	194
BseMII	CTCAG	2 cut(s)	297, 329
BseNI	ACTGG	2 cut(s)	118, 493
BseXI	GCAGC	1 cut(s)	474
Bsh1285I	CGRYCG	1 cut(s)	258
BshFI	GGCC	1 cut(s)	104
BshNI	GGYRCC	2 cut(s)	152, 394
BsiEI	CGRYCG	1 cut(s)	258
BsiHKAI	GWGCWC	1 cut(s)	186
BsiSI	CCGG	3 cut(s)	16, 100, 275
BsmAI	GTCTC	1 cut(s)	432
BsmBI	CGTCTC	1 cut(s)	432
BsnI	GGCC	1 cut(s)	104
Bsp1286I	GDGCHC	1 cut(s)	186
Bsp143I	GATC	2 cut(s)	61, 255
BspACI	CCGC	5 cut(s)	42, 150, 294, 471, 474
BspANI	GGCC	1 cut(s)	104
BspCNI	CTCAG	2 cut(s)	298, 330
BspLI	GGNNCC	2 cut(s)	154, 396
BspMI	ACCTGC	2 cut(s)	324, 382
BspT107I	GGYRCC	2 cut(s)	152, 394
BsrDI	GCAATG	1 cut(s)	194
BsrI	ACTGG	2 cut(s)	118, 493
BssECI	CCNNGG	1 cut(s)	450
BssMI	GATC	2 cut(s)	61, 255
BssNI	GRCGYC	2 cut(s)	153, 422
Bst4CI	ACNGT	2 cut(s)	97, 217
BstACI	GRCGYC	2 cut(s)	153, 422
BstC8I	GCNNGC	1 cut(s)	201
BstDEI	CTNAG	2 cut(s)	306, 338
BstDSI	CCRYGG	1 cut(s)	450
BstF5I	GGATG	1 cut(s)	393
BstH2I	RGCGCY	1 cut(s)	156
BstHHI	GCGC	1 cut(s)	155
BstKTI	GATC	2 cut(s)	64, 258
BstMAI	GTCTC	1 cut(s)	432
BstMBI	GATC	2 cut(s)	61, 255
BstMCI	CGRYCG	1 cut(s)	258
BstMWI	GCNNNNNNNGC	5 cut(s)	123, 190, 468, 471, 477
BstNSI	RCATGY	2 cut(s)	203, 414
BstSCI	CCNGG	2 cut(s)	14, 99
BstV1I	GCAGC	1 cut(s)	474
BstXI	CCANNNNNNTGG	1 cut(s)	136
Bsu36I	CCTNAGG	1 cut(s)	306
BsuRI	GGCC	1 cut(s)	104
BtgI	CCRYGG	1 cut(s)	450
BtsCI	GGATG	1 cut(s)	393
BveI	ACCTGC	2 cut(s)	324, 382
Cac8I	GCNNGC	1 cut(s)	201
CfoI	GCGC	1 cut(s)	155
Cfr13I	GGNCC	2 cut(s)	102, 207
Csp6I	GTAC	1 cut(s)	505
CviAII	CATG	4 cut(s)	136, 200, 411, 439
CviJI	RGCY	6 cut(s)	22, 104, 117, 178, 312, 465
CviKI_1	RGCY	6 cut(s)	22, 104, 117, 178, 312, 465
CviQI	GTAC	1 cut(s)	505
DdeI	CTNAG	2 cut(s)	306, 338
DinI	GGCGCC	1 cut(s)	154
DpnI	GATC	2 cut(s)	63, 257
DpnII	GATC	2 cut(s)	61, 255
EciI	GGCGGA	1 cut(s)	31
Eco47I	GGWCC	1 cut(s)	207
Eco81I	CCTNAGG	1 cut(s)	306
EcoO109I	RGGNCCY	1 cut(s)	207
EgeI	GGCGCC	1 cut(s)	154
EheI	GGCGCC	1 cut(s)	154
Esp3I	CGTCTC	1 cut(s)	432
FaeI	CATG	4 cut(s)	139, 203, 414, 442
FaiI	YATR	5 cut(s)	38, 137, 201, 412, 440
FatI	CATG	4 cut(s)	135, 199, 410, 438
FauI	CCCGC	1 cut(s)	287
Fnu4HI	GCNGC	3 cut(s)	151, 463, 472
FokI	GGATG	1 cut(s)	400
Fsp4HI	GCNGC	3 cut(s)	151, 463, 472
FspBI	CTAG	1 cut(s)	23
GlaI	GCGC	1 cut(s)	154
GluI	GCNGC	3 cut(s)	151, 463, 472
GsuI	CTGGAG	1 cut(s)	510
HaeII	RGCGCY	1 cut(s)	156
HaeIII	GGCC	1 cut(s)	104
HapII	CCGG	3 cut(s)	16, 100, 275
HhaI	GCGC	1 cut(s)	155
Hin1I	GRCGYC	2 cut(s)	153, 422
Hin1II	CATG	4 cut(s)	139, 203, 414, 442
Hin6I	GCGC	1 cut(s)	153
HinP1I	GCGC	1 cut(s)	153
HindIII	AAGCTT	1 cut(s)	176
HinfI	GANTC	4 cut(s)	33, 223, 246, 271
HpaII	CCGG	3 cut(s)	16, 100, 275
HphI	GGTGA	1 cut(s)	394
Hpy188I	TCNGA	4 cut(s)	32, 260, 283, 519
Hpy188III	TCNNGA	2 cut(s)	76, 250
Hpy99I	CGWCG	2 cut(s)	424, 427
HpyAV	CCTTC	2 cut(s)	140, 220
HpyCH4III	ACNGT	2 cut(s)	97, 217
HpyCH4IV	ACGT	2 cut(s)	11, 422
HpyCH4V	TGCA	5 cut(s)	55, 199, 231, 319, 391
HpyF10VI	GCNNNNNNNGC	5 cut(s)	123, 190, 468, 471, 477
HpyF3I	CTNAG	2 cut(s)	306, 338
HpySE526I	ACGT	2 cut(s)	11, 422
Hsp92I	GRCGYC	2 cut(s)	153, 422
Hsp92II	CATG	4 cut(s)	139, 203, 414, 442
HspAI	GCGC	1 cut(s)	153
KasI	GGCGCC	1 cut(s)	152
Kzo9I	GATC	2 cut(s)	61, 255
Lsp1109I	GCAGC	1 cut(s)	474
LweI	GCATC	1 cut(s)	378
MaeI	CTAG	1 cut(s)	23
MaeII	ACGT	2 cut(s)	11, 422
MaeIII	GTNAC	1 cut(s)	329
MalI	GATC	2 cut(s)	63, 257
MboI	GATC	2 cut(s)	61, 255
MhlI	GDGCHC	1 cut(s)	186
MluCI	AATT	2 cut(s)	56, 523
Mly113I	GGCGCC	1 cut(s)	153
MlyI	GAGTC	2 cut(s)	42, 255
MmeI	TCCRAC	1 cut(s)	261
MnlI	CCTC	4 cut(s)	97, 198, 301, 378
MseI	TTAA	1 cut(s)	372
MslI	CAYNNNNRTG	1 cut(s)	134
MspI	CCGG	3 cut(s)	16, 100, 275
MspR9I	CCNGG	2 cut(s)	16, 101
MwoI	GCNNNNNNNGC	5 cut(s)	123, 190, 468, 471, 477
NarI	GGCGCC	1 cut(s)	153
NciI	CCSGG	2 cut(s)	16, 101
NdeII	GATC	2 cut(s)	61, 255
NlaIII	CATG	4 cut(s)	139, 203, 414, 442
NlaIV	GGNNCC	2 cut(s)	154, 396
NmeAIII	GCCGAG	1 cut(s)	70
NspI	RCATGY	2 cut(s)	203, 414
PaeI	GCATGC	1 cut(s)	203
PaqCI	CACCTGC	1 cut(s)	382
PcsI	WCGNNNNNNNCGW	1 cut(s)	431
PfeI	GAWTC	2 cut(s)	223, 271
PflFI	GACNNNGTC	1 cut(s)	424
PfoI	TCCNGGA	1 cut(s)	14
PkrI	GCNGC	3 cut(s)	152, 464, 473
Ple19I	CGATCG	1 cut(s)	258
PleI	GAGTC	2 cut(s)	41, 254
PluTI	GGCGCC	1 cut(s)	156
PpsI	GAGTC	2 cut(s)	41, 254
PpuMI	RGGWCCY	1 cut(s)	207
Psp5II	RGGWCCY	1 cut(s)	207
PspN4I	GGNNCC	2 cut(s)	154, 396
PspPI	GGNCC	2 cut(s)	102, 207
PspPPI	RGGWCCY	1 cut(s)	207
PsyI	GACNNNGTC	1 cut(s)	424
PvuI	CGATCG	1 cut(s)	258
RsaI	GTAC	1 cut(s)	506
RsaNI	GTAC	1 cut(s)	505
RseI	CAYNNNNRTG	1 cut(s)	134
SaqAI	TTAA	1 cut(s)	372
SatI	GCNGC	3 cut(s)	151, 463, 472
Sau3AI	GATC	2 cut(s)	61, 255
Sau96I	GGNCC	2 cut(s)	102, 207
SchI	GAGTC	2 cut(s)	42, 255
ScrFI	CCNGG	2 cut(s)	16, 101
SduI	GDGCHC	1 cut(s)	186
SetI	ASST	8 cut(s)	14, 24, 180, 209, 318, 396, 425, 467
SfaNI	GCATC	1 cut(s)	378
SfoI	GGCGCC	1 cut(s)	154
SinI	GGWCC	1 cut(s)	207
SmiMI	CAYNNNNRTG	1 cut(s)	134
SphI	GCATGC	1 cut(s)	203
Sse9I	AATT	2 cut(s)	56, 523
SsiI	CCGC	5 cut(s)	42, 150, 294, 471, 474
SspDI	GGCGCC	1 cut(s)	152
SspI	AATATT	1 cut(s)	376
SspMI	CTAG	1 cut(s)	23
StyD4I	CCNGG	2 cut(s)	14, 99
TaaI	ACNGT	2 cut(s)	97, 217
TaiI	ACGT	2 cut(s)	14, 425
TaqI	TCGA	3 cut(s)	64, 186, 434
TasI	AATT	2 cut(s)	56, 523
TauI	GCSGC	2 cut(s)	153, 474
TfiI	GAWTC	2 cut(s)	223, 271
Tru1I	TTAA	1 cut(s)	372
Tru9I	TTAA	1 cut(s)	372
TseI	GCWGC	1 cut(s)	462
TspGWI	ACGGA	1 cut(s)	258
Tth111I	GACNNNGTC	1 cut(s)	424
VpaK11BI	GGWCC	1 cut(s)	207
XceI	RCATGY	2 cut(s)	203, 414
XspI	CTAG	1 cut(s)	23
ZraI	GACGTC	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.