AT3G17680

Kinase interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0002133
Physical Location & Seq
Reverse (-)
6042907 .. 6044762
1856 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G17680.3

Sequence Viewer

Length: 942 bp
ATGAAGAACAAAGCATCCATGGAAGCTCCACAGTTGCCATCTCTCTCTGACCTTGAAGCTCGGATGCAAATCCTGCGTGAGTCTGGTTTTCAAGAAAGCCAAGGAGATGATGATACCTTTGCTCAACGAGCTGAATGGTTTTACCAGGGACGACCTTTGCTTCTCTCACTTTGTCTGGACCTGTACAACGGCTACGTCACTCTCTTGGGTCGTTCTTCTCATCAGACCAGACTTAAACCCACTACTTCTCTTCCGAACCAGCTTCTCCAAGATGATGATGACTGCATTTCGGACATTGATTCCGTTAGTGAGGTCAGTTCTGAAGTTGAGAGCACCTTATCCTTTCAACAGATGAAAGATCCTACTGCGGTTTCTGAGAAAGTCGATGAGCTTGTATCCCAACTTGTGACAGCAAGCTTGGACAAAGAGATTCTGAAACACGAGTTACTTCACAAGGACCAACAGTTTCATGAAGCCTCCAAGACTATAGAGCTGTTGAAGAAGTTTGTCATGTTGCTGGAGATGGAGAAAGAAGTGGCTGTGGAGGAAAACGCTAATCTTGGCTACAAACTCACTTCTCTCTTGGAGGAGAACAGAGAGCTAGCCACTGAGGCATTGTTCATGAAGAACGAAGCTGTTGGGCTTGCTAGGTGTGTGCTTAAGATGAGAGATGACCACTTTCACAAGGTCTGCATTCTCCAGAACCGCATCTACTCGCTTCAGGCATCTAGGAACTCAGAGCCCGTCTCTGATAAGGTCTCATACGGATGCTTTGGCCTGGATAAGCATAAGACCAAAAAGAAGAAGGAGAACAAAACCGAAGAGAAGAAGCCTGGATTCAAGTGGTTGAAGAAACTGAACACCATTAACCTGTTTACAAAGTGCAGCCTTAACCCATCGGCTGCTGCTCCATCATGCTGCACTTTCGACTTGCCTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIP1

Protein Analysis

313

Amino Acids

35.57

Weight (kDa)

5.64

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 368, 706
AclWI GGATC 1 cut(s) 353
AcuI CTGAAG 2 cut(s) 342, 704
AfaI GTAC 1 cut(s) 185
AflII CTTAAG 1 cut(s) 659
AgsI TTSAA 6 cut(s) 56, 92, 347, 499, 841, 850
AjnI CCWGG 3 cut(s) 144, 777, 832
AloI GAACNNNNNNTCC 1 cut(s) 31
AluBI AGCT 9 cut(s) 26, 59, 131, 262, 391, 417, 493, 601, 635
AluI AGCT 9 cut(s) 26, 59, 131, 262, 391, 417, 493, 601, 635
Alw21I GWGCWC 1 cut(s) 335
Alw26I GTCTC 2 cut(s) 751, 763
AlwI GGATC 1 cut(s) 353
AoxI GGCC 1 cut(s) 775
ApeKI GCWGC 4 cut(s) 885, 902, 905, 918
AspS9I GGNCC 2 cut(s) 178, 457
AsuNHI GCTAGC 1 cut(s) 601
AvaII GGWCC 2 cut(s) 178, 457
BanII GRGCYC 1 cut(s) 744
BauI CACGAG 1 cut(s) 440
Bbv12I GWGCWC 1 cut(s) 335
BbvI GCAGC 4 cut(s) 889, 892, 897, 905
BccI CCATC 4 cut(s) 46, 517, 904, 919
BceAI ACGGC 1 cut(s) 205
BciT130I CCWGG 3 cut(s) 146, 779, 834
BciVI GTATCC 1 cut(s) 406
BcoDI GTCTC 2 cut(s) 751, 763
BfaI CTAG 3 cut(s) 602, 648, 729
BfmI CTRYAG 1 cut(s) 486
BfrI CTTAAG 1 cut(s) 659
BfuI GTATCC 1 cut(s) 406
BglI GCCNNNNNGGC 1 cut(s) 611
BisI GCNGC 4 cut(s) 886, 903, 906, 919
BlsI GCNGC 4 cut(s) 887, 904, 907, 920
Bme1390I CCNGG 3 cut(s) 146, 779, 834
Bme18I GGWCC 2 cut(s) 178, 457
BmgT120I GGNCC 2 cut(s) 178, 457
BmrFI CCNGG 3 cut(s) 146, 779, 834
BmsI GCATC 5 cut(s) 23, 54, 717, 734, 758
BmtI GCTAGC 1 cut(s) 605
BplI GAGNNNNNCTC 2 cut(s) 731, 763
BpmI CTGGAG 2 cut(s) 539, 683
BsaBI GATNNNNATC 1 cut(s) 68
BsaI GGTCTC 1 cut(s) 763
BsaJI CCNNGG 3 cut(s) 18, 100, 145
Bse8I GATNNNNATC 1 cut(s) 68
BseBI CCWGG 3 cut(s) 146, 779, 834
BseDI CCNNGG 3 cut(s) 18, 100, 145
BseGI GGATG 3 cut(s) 14, 69, 773
BseJI GATNNNNATC 1 cut(s) 68
BseMII CTCAG 3 cut(s) 366, 600, 750
BseRI GAGGAG 1 cut(s) 602
BseXI GCAGC 4 cut(s) 889, 892, 897, 905
BsgI GTGCAG 2 cut(s) 904, 904
BshFI GGCC 1 cut(s) 777
BsiHKAI GWGCWC 1 cut(s) 335
BslFI GGGAC 1 cut(s) 162
BsmAI GTCTC 2 cut(s) 751, 763
BsmBI CGTCTC 1 cut(s) 751
BsmFI GGGAC 1 cut(s) 162
BsmI GAATGC 1 cut(s) 693
BsnI GGCC 1 cut(s) 777
Bso31I GGTCTC 1 cut(s) 763
Bsp1286I GDGCHC 2 cut(s) 335, 744
Bsp1407I TGTACA 1 cut(s) 183
Bsp143I GATC 1 cut(s) 358
Bsp19I CCATGG 1 cut(s) 18
BspACI CCGC 2 cut(s) 368, 706
BspANI GGCC 1 cut(s) 777
BspCNI CTCAG 3 cut(s) 367, 601, 749
BspHI TCATGA 2 cut(s) 469, 621
BspOI GCTAGC 1 cut(s) 605
BspPI GGATC 1 cut(s) 353
BspTI CTTAAG 1 cut(s) 659
BspTNI GGTCTC 1 cut(s) 763
BsrGI TGTACA 1 cut(s) 183
BssECI CCNNGG 3 cut(s) 18, 100, 145
BssMI GATC 1 cut(s) 358
BssSI CACGAG 1 cut(s) 440
BssT1I CCWWGG 2 cut(s) 18, 100
Bst2BI CACGAG 1 cut(s) 440
Bst2UI CCWGG 3 cut(s) 146, 779, 834
Bst4CI ACNGT 2 cut(s) 33, 465
Bst6I CTCTTC 2 cut(s) 255, 816
BstAFI CTTAAG 1 cut(s) 659
BstAPI GCANNNNNTGC 1 cut(s) 73
BstAUI TGTACA 1 cut(s) 183
BstC8I GCNNGC 3 cut(s) 415, 603, 645
BstDEI CTNAG 3 cut(s) 375, 609, 736
BstDSI CCRYGG 1 cut(s) 18
BstF5I GGATG 3 cut(s) 14, 69, 773
BstKTI GATC 1 cut(s) 361
BstMAI GTCTC 2 cut(s) 751, 763
BstMBI GATC 1 cut(s) 358
BstMWI GCNNNNNNNGC 3 cut(s) 73, 128, 611
BstNI CCWGG 3 cut(s) 146, 779, 834
BstSCI CCNGG 3 cut(s) 144, 777, 832
BstSFI CTRYAG 1 cut(s) 486
BstV1I GCAGC 4 cut(s) 889, 892, 897, 905
BstX2I RGATCY 1 cut(s) 358
BstYI RGATCY 1 cut(s) 358
BsuI GTATCC 1 cut(s) 406
BsuRI GGCC 1 cut(s) 777
BtgI CCRYGG 1 cut(s) 18
BtsCI GGATG 3 cut(s) 14, 69, 773
BtsIMutI CAGTG 1 cut(s) 606
Cac8I GCNNGC 3 cut(s) 415, 603, 645
CciI TCATGA 2 cut(s) 469, 621
Cfr13I GGNCC 2 cut(s) 178, 457
Csp6I GTAC 1 cut(s) 184
CviAII CATG 5 cut(s) 19, 470, 511, 622, 915
CviQI GTAC 1 cut(s) 184
DdeI CTNAG 3 cut(s) 375, 609, 736
DpnI GATC 1 cut(s) 360
DpnII GATC 1 cut(s) 358
Eam1104I CTCTTC 2 cut(s) 255, 816
EarI CTCTTC 2 cut(s) 255, 816
Eco130I CCWWGG 2 cut(s) 18, 100
Eco24I GRGCYC 1 cut(s) 744
Eco31I GGTCTC 1 cut(s) 763
Eco47I GGWCC 2 cut(s) 178, 457
Eco57I CTGAAG 2 cut(s) 342, 704
EcoRII CCWGG 3 cut(s) 144, 777, 832
EcoT14I CCWWGG 2 cut(s) 18, 100
EcoT38I GRGCYC 1 cut(s) 744
ErhI CCWWGG 2 cut(s) 18, 100
Esp3I CGTCTC 1 cut(s) 751
FaeI CATG 5 cut(s) 22, 473, 514, 625, 918
FaiI YATR 8 cut(s) 20, 471, 488, 512, 623, 763, 789, 916
FaqI GGGAC 1 cut(s) 162
FatI CATG 5 cut(s) 18, 469, 510, 621, 914
Fnu4HI GCNGC 4 cut(s) 886, 903, 906, 919
FokI GGATG 2 cut(s) 76, 780
FriOI GRGCYC 1 cut(s) 744
Fsp4HI GCNGC 4 cut(s) 886, 903, 906, 919
FspBI CTAG 3 cut(s) 602, 648, 729
GluI GCNGC 4 cut(s) 886, 903, 906, 919
GsuI CTGGAG 2 cut(s) 539, 683
HaeIII GGCC 1 cut(s) 777
Hin1II CATG 5 cut(s) 22, 473, 514, 625, 918
HindIII AAGCTT 1 cut(s) 415
HinfI GANTC 4 cut(s) 80, 299, 430, 837
Hpy166II GTNNAC 1 cut(s) 876
Hpy188III TCNNGA 5 cut(s) 92, 176, 470, 622, 700
Hpy8I GTNNAC 1 cut(s) 876
HpyAV CCTTC 1 cut(s) 799
HpyCH4III ACNGT 2 cut(s) 33, 465
HpyCH4IV ACGT 1 cut(s) 195
HpyCH4V TGCA 5 cut(s) 67, 285, 693, 885, 921
HpyF10VI GCNNNNNNNGC 3 cut(s) 73, 128, 611
HpyF3I CTNAG 3 cut(s) 375, 609, 736
HpySE526I ACGT 1 cut(s) 195
Hsp92II CATG 5 cut(s) 22, 473, 514, 625, 918
Kzo9I GATC 1 cut(s) 358
LmnI GCTCC 2 cut(s) 31, 913
Lsp1109I GCAGC 4 cut(s) 889, 892, 897, 905
LweI GCATC 5 cut(s) 23, 54, 717, 734, 758
MaeI CTAG 3 cut(s) 602, 648, 729
MaeII ACGT 1 cut(s) 195
MaeIII GTNAC 3 cut(s) 196, 406, 444
MalI GATC 1 cut(s) 360
MboI GATC 1 cut(s) 358
MboII GAAGA 9 cut(s) 16, 207, 242, 511, 637, 814, 833, 838, 862
MflI RGATCY 1 cut(s) 358
MhlI GDGCHC 2 cut(s) 335, 744
MlyI GAGTC 1 cut(s) 89
MnlI CCTC 5 cut(s) 304, 487, 538, 580, 604
MseI TTAA 4 cut(s) 234, 660, 867, 891
MslI CAYNNNNRTG 1 cut(s) 766
MspCI CTTAAG 1 cut(s) 659
MspR9I CCNGG 3 cut(s) 146, 779, 834
Mva1269I GAATGC 1 cut(s) 693
MvaI CCWGG 3 cut(s) 146, 779, 834
MwoI GCNNNNNNNGC 3 cut(s) 73, 128, 611
NcoI CCATGG 1 cut(s) 18
NdeII GATC 1 cut(s) 358
NheI GCTAGC 1 cut(s) 601
NlaIII CATG 5 cut(s) 22, 473, 514, 625, 918
NmuCI GTSAC 2 cut(s) 196, 406
PagI TCATGA 2 cut(s) 469, 621
PctI GAATGC 1 cut(s) 693
PfeI GAWTC 3 cut(s) 299, 430, 837
PkrI GCNGC 4 cut(s) 887, 904, 907, 920
PleI GAGTC 1 cut(s) 88
PpsI GAGTC 1 cut(s) 88
Psp6I CCWGG 3 cut(s) 144, 777, 832
PspGI CCWGG 3 cut(s) 144, 777, 832
PspPI GGNCC 2 cut(s) 178, 457
PsrI GAACNNNNNNTAC 2 cut(s) 695, 727
PsuI RGATCY 1 cut(s) 358
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
RseI CAYNNNNRTG 1 cut(s) 766
SaqAI TTAA 4 cut(s) 234, 660, 867, 891
SatI GCNGC 4 cut(s) 886, 903, 906, 919
Sau3AI GATC 1 cut(s) 358
Sau96I GGNCC 2 cut(s) 178, 457
SchI GAGTC 1 cut(s) 89
ScrFI CCNGG 3 cut(s) 146, 779, 834
SduI GDGCHC 2 cut(s) 335, 744
SfaNI GCATC 5 cut(s) 23, 54, 717, 734, 758
SfcI CTRYAG 1 cut(s) 486
SinI GGWCC 2 cut(s) 178, 457
SmiMI CAYNNNNRTG 1 cut(s) 766
SmlI CTYRAG 1 cut(s) 659
SmoI CTYRAG 1 cut(s) 659
SsiI CCGC 2 cut(s) 368, 706
SspMI CTAG 3 cut(s) 602, 648, 729
StyD4I CCNGG 3 cut(s) 144, 777, 832
StyI CCWWGG 2 cut(s) 18, 100
TaaI ACNGT 2 cut(s) 33, 465
TaiI ACGT 1 cut(s) 198
TaqI TCGA 2 cut(s) 384, 927
TatI WGTACW 1 cut(s) 183
TfiI GAWTC 3 cut(s) 299, 430, 837
Tru1I TTAA 4 cut(s) 234, 660, 867, 891
Tru9I TTAA 4 cut(s) 234, 660, 867, 891
TscAI CASTG 1 cut(s) 613
TseFI GTSAC 2 cut(s) 196, 406
TseI GCWGC 4 cut(s) 885, 902, 905, 918
Tsp45I GTSAC 2 cut(s) 196, 406
TspDTI ATGAA 6 cut(s) 17, 368, 458, 486, 610, 638
TspGWI ACGGA 2 cut(s) 292, 780
TspRI CASTG 1 cut(s) 613
Vha464I CTTAAG 1 cut(s) 659
VpaK11BI GGWCC 2 cut(s) 178, 457
XspI CTAG 3 cut(s) 602, 648, 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.