Domain of unknown function (DUF4408)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48405 AT3G17680 AT3G17680 AT3G17680 |
| fragaria_vesca | FvH4_5g18280 FvH4_5g18280 FvH4_5g18280 FvH4_5g18280 FvH4_5g18280 FvH4_5g18290 |
| malus_domestica | MD06G1238400.v1.1 MD06G1238700.v1.1 MD14G1244700.v1.1 MD14G1244900.v1.1 |
| prunus_persica | Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242600_v2.0.a1 |
| pyrus_communis | pycom06g21390 pycom06g21420 pycom14g20590 |
| rosa_chinensis | RchiOBHm_Chr7g0177291 RchiOBHm_Chr7g0177301 |
| rosa_laevigata | RLG00000005548 |
| rosa_multiflora | Rmu_sc0005310.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00275960 Rroxscaffold_3G00275970 |
| rosa_rugosa | Rorug06G0404500 Rorug06G0404600 Rorug06G0404700 Rorug06G0404800 |
| rosa_samantha | Rh7AG004500 Rh7AG004600 Rh7BG004400 Rh7BG004500 Rh7CG004300 Rh7CG004400 Rh7DG004300 Rh7DG004400 |
| rosa_wichuraiana | Rw7G000370 Rw7G000380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 564, 638, 737 |
| AclI | AACGTT | 1 cut(s) | 1033 |
| AclWI | GGATC | 2 cut(s) | 394, 807 |
| AcoI | YGGCCR | 2 cut(s) | 621, 777 |
| AcuI | CTGAAG | 1 cut(s) | 995 |
| AfaI | GTAC | 4 cut(s) | 15, 376, 386, 507 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 159, 930 |
| AgsI | TTSAA | 3 cut(s) | 103, 254, 892 |
| AhlI | ACTAGT | 2 cut(s) | 332, 407 |
| AjnI | CCWGG | 1 cut(s) | 779 |
| AluBI | AGCT | 7 cut(s) | 58, 177, 486, 515, 787, 958, 971 |
| AluI | AGCT | 7 cut(s) | 58, 177, 486, 515, 787, 958, 971 |
| Alw21I | GWGCWC | 1 cut(s) | 789 |
| Alw26I | GTCTC | 1 cut(s) | 716 |
| AlwI | GGATC | 2 cut(s) | 394, 807 |
| AoxI | GGCC | 3 cut(s) | 621, 777, 975 |
| ApeKI | GCWGC | 1 cut(s) | 236 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 397, 429 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 82 |
| AspS9I | GGNCC | 1 cut(s) | 162 |
| AsuHPI | GGTGA | 2 cut(s) | 564, 769 |
| AsuII | TTCGAA | 1 cut(s) | 470 |
| AvaII | GGWCC | 1 cut(s) | 162 |
| BanII | GRGCYC | 2 cut(s) | 789, 880 |
| BbsI | GAAGAC | 1 cut(s) | 648 |
| Bbv12I | GWGCWC | 1 cut(s) | 789 |
| BbvCI | CCTCAGC | 1 cut(s) | 972 |
| BbvI | GCAGC | 1 cut(s) | 223 |
| BccI | CCATC | 1 cut(s) | 365 |
| BceAI | ACGGC | 2 cut(s) | 271, 1038 |
| BciT130I | CCWGG | 1 cut(s) | 781 |
| BciVI | GTATCC | 1 cut(s) | 931 |
| BclI | TGATCA | 3 cut(s) | 340, 480, 817 |
| BcoDI | GTCTC | 1 cut(s) | 716 |
| BcuI | ACTAGT | 2 cut(s) | 332, 407 |
| BfaI | CTAG | 3 cut(s) | 333, 408, 1019 |
| BfuI | GTATCC | 1 cut(s) | 931 |
| BisI | GCNGC | 2 cut(s) | 237, 737 |
| BlsI | GCNGC | 2 cut(s) | 238, 738 |
| Bme1390I | CCNGG | 1 cut(s) | 781 |
| Bme18I | GGWCC | 1 cut(s) | 162 |
| BmgT120I | GGNCC | 1 cut(s) | 162 |
| BmrFI | CCNGG | 1 cut(s) | 781 |
| BpiI | GAAGAC | 1 cut(s) | 648 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 569, 601 |
| Bpu10I | CCTNAGC | 1 cut(s) | 972 |
| Bpu14I | TTCGAA | 1 cut(s) | 470 |
| BsaBI | GATNNNNATC | 3 cut(s) | 816, 819, 822 |
| BsaJI | CCNNGG | 5 cut(s) | 591, 627, 740, 780, 1054 |
| BsaWI | WCCGGW | 1 cut(s) | 574 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 421, 451 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 159, 930 |
| Bse118I | RCCGGY | 1 cut(s) | 619 |
| Bse1I | ACTGG | 1 cut(s) | 754 |
| Bse8I | GATNNNNATC | 3 cut(s) | 816, 819, 822 |
| BseBI | CCWGG | 1 cut(s) | 781 |
| BseDI | CCNNGG | 5 cut(s) | 591, 627, 740, 780, 1054 |
| BseGI | GGATG | 2 cut(s) | 16, 495 |
| BseJI | GATNNNNATC | 3 cut(s) | 816, 819, 822 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 159, 930 |
| BseMII | CTCAG | 3 cut(s) | 184, 962, 963 |
| BseNI | ACTGG | 1 cut(s) | 754 |
| BseRI | GAGGAG | 5 cut(s) | 232, 429, 577, 644, 647 |
| BseXI | GCAGC | 1 cut(s) | 223 |
| BsgI | GTGCAG | 1 cut(s) | 93 |
| BshFI | GGCC | 3 cut(s) | 623, 779, 977 |
| BsiHKAI | GWGCWC | 1 cut(s) | 789 |
| BsiSI | CCGG | 3 cut(s) | 575, 620, 776 |
| BslFI | GGGAC | 2 cut(s) | 743, 1055 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 159, 930 |
| BsmAI | GTCTC | 1 cut(s) | 716 |
| BsmFI | GGGAC | 2 cut(s) | 743, 1055 |
| BsnI | GGCC | 3 cut(s) | 623, 779, 977 |
| Bsp119I | TTCGAA | 1 cut(s) | 470 |
| Bsp1286I | GDGCHC | 2 cut(s) | 789, 880 |
| Bsp143I | GATC | 8 cut(s) | 340, 399, 480, 799, 817, 862, 990, 1027 |
| BspACI | CCGC | 3 cut(s) | 564, 638, 737 |
| BspANI | GGCC | 3 cut(s) | 623, 779, 977 |
| BspCNI | CTCAG | 3 cut(s) | 183, 961, 964 |
| BspHI | TCATGA | 1 cut(s) | 343 |
| BspPI | GGATC | 2 cut(s) | 394, 807 |
| BspQI | GCTCTTC | 1 cut(s) | 948 |
| BspT104I | TTCGAA | 1 cut(s) | 470 |
| BsrFI | RCCGGY | 1 cut(s) | 619 |
| BsrI | ACTGG | 1 cut(s) | 754 |
| BssAI | RCCGGY | 1 cut(s) | 619 |
| BssECI | CCNNGG | 5 cut(s) | 591, 627, 740, 780, 1054 |
| BssMI | GATC | 8 cut(s) | 340, 399, 480, 799, 817, 862, 990, 1027 |
| BssT1I | CCWWGG | 1 cut(s) | 591 |
| Bst2UI | CCWGG | 1 cut(s) | 781 |
| Bst4CI | ACNGT | 2 cut(s) | 364, 547 |
| Bst6I | CTCTTC | 2 cut(s) | 153, 948 |
| BstBI | TTCGAA | 1 cut(s) | 470 |
| BstC8I | GCNNGC | 3 cut(s) | 488, 621, 969 |
| BstDEI | CTNAG | 3 cut(s) | 170, 948, 972 |
| BstDSI | CCRYGG | 1 cut(s) | 1054 |
| BstF5I | GGATG | 2 cut(s) | 16, 495 |
| BstKTI | GATC | 8 cut(s) | 343, 402, 483, 802, 820, 865, 993, 1030 |
| BstMAI | GTCTC | 1 cut(s) | 716 |
| BstMBI | GATC | 8 cut(s) | 340, 399, 480, 799, 817, 862, 990, 1027 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 47, 64, 964, 1015 |
| BstNI | CCWGG | 1 cut(s) | 781 |
| BstSCI | CCNGG | 1 cut(s) | 779 |
| BstV1I | GCAGC | 1 cut(s) | 223 |
| BstV2I | GAAGAC | 1 cut(s) | 648 |
| BstX2I | RGATCY | 1 cut(s) | 399 |
| BstYI | RGATCY | 1 cut(s) | 399 |
| BsuI | GTATCC | 1 cut(s) | 931 |
| BsuRI | GGCC | 3 cut(s) | 623, 779, 977 |
| BtgI | CCRYGG | 1 cut(s) | 1054 |
| BtgZI | GCGATG | 1 cut(s) | 217 |
| BtsCI | GGATG | 2 cut(s) | 16, 495 |
| Cac8I | GCNNGC | 3 cut(s) | 488, 621, 969 |
| CciI | TCATGA | 1 cut(s) | 343 |
| Cfr10I | RCCGGY | 1 cut(s) | 619 |
| Cfr13I | GGNCC | 1 cut(s) | 162 |
| Csp6I | GTAC | 4 cut(s) | 14, 375, 385, 506 |
| CviAII | CATG | 8 cut(s) | 320, 344, 663, 803, 873, 925, 943, 1045 |
| CviQI | GTAC | 4 cut(s) | 14, 375, 385, 506 |
| DdeI | CTNAG | 3 cut(s) | 170, 948, 972 |
| DpnI | GATC | 8 cut(s) | 342, 401, 482, 801, 819, 864, 992, 1029 |
| DpnII | GATC | 8 cut(s) | 340, 399, 480, 799, 817, 862, 990, 1027 |
| EaeI | YGGCCR | 2 cut(s) | 621, 777 |
| Eam1104I | CTCTTC | 2 cut(s) | 153, 948 |
| EarI | CTCTTC | 2 cut(s) | 153, 948 |
| EciI | GGCGGA | 1 cut(s) | 653 |
| Ecl136II | GAGCTC | 1 cut(s) | 787 |
| Eco130I | CCWWGG | 1 cut(s) | 591 |
| Eco147I | AGGCCT | 1 cut(s) | 977 |
| Eco24I | GRGCYC | 2 cut(s) | 789, 880 |
| Eco47I | GGWCC | 1 cut(s) | 162 |
| Eco53kI | GAGCTC | 1 cut(s) | 787 |
| Eco57I | CTGAAG | 1 cut(s) | 995 |
| EcoICRI | GAGCTC | 1 cut(s) | 787 |
| EcoRII | CCWGG | 1 cut(s) | 779 |
| EcoT14I | CCWWGG | 1 cut(s) | 591 |
| EcoT38I | GRGCYC | 2 cut(s) | 789, 880 |
| ErhI | CCWWGG | 1 cut(s) | 591 |
| FaeI | CATG | 8 cut(s) | 323, 347, 666, 806, 876, 928, 946, 1048 |
| FaqI | GGGAC | 2 cut(s) | 743, 1055 |
| FatI | CATG | 8 cut(s) | 319, 343, 662, 802, 872, 924, 942, 1044 |
| FbaI | TGATCA | 3 cut(s) | 340, 480, 817 |
| Fnu4HI | GCNGC | 2 cut(s) | 237, 737 |
| FokI | GGATG | 2 cut(s) | 23, 482 |
| FriOI | GRGCYC | 2 cut(s) | 789, 880 |
| Fsp4HI | GCNGC | 2 cut(s) | 237, 737 |
| FspBI | CTAG | 3 cut(s) | 333, 408, 1019 |
| GluI | GCNGC | 2 cut(s) | 237, 737 |
| HaeIII | GGCC | 3 cut(s) | 623, 779, 977 |
| HapII | CCGG | 3 cut(s) | 575, 620, 776 |
| Hin1II | CATG | 8 cut(s) | 323, 347, 666, 806, 876, 928, 946, 1048 |
| HindIII | AAGCTT | 1 cut(s) | 513 |
| HinfI | GANTC | 4 cut(s) | 536, 599, 946, 1022 |
| HpaII | CCGG | 3 cut(s) | 575, 620, 776 |
| HphI | GGTGA | 2 cut(s) | 564, 769 |
| Hpy188I | TCNGA | 8 cut(s) | 173, 421, 744, 882, 901, 1002, 1014, 1027 |
| Hpy188III | TCNNGA | 6 cut(s) | 152, 160, 344, 794, 827, 950 |
| HpyAV | CCTTC | 4 cut(s) | 456, 521, 579, 988 |
| HpyCH4III | ACNGT | 2 cut(s) | 364, 547 |
| HpyCH4IV | ACGT | 1 cut(s) | 1033 |
| HpyCH4V | TGCA | 3 cut(s) | 74, 428, 702 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 47, 64, 964, 1015 |
| HpyF3I | CTNAG | 3 cut(s) | 170, 948, 972 |
| HpySE526I | ACGT | 1 cut(s) | 1033 |
| Hsp92II | CATG | 8 cut(s) | 323, 347, 666, 806, 876, 928, 946, 1048 |
| KroI | GCCGGC | 1 cut(s) | 619 |
| KroNI | GCCGGC | 1 cut(s) | 621 |
| Ksp22I | TGATCA | 3 cut(s) | 340, 480, 817 |
| Kzo9I | GATC | 8 cut(s) | 340, 399, 480, 799, 817, 862, 990, 1027 |
| LguI | GCTCTTC | 1 cut(s) | 948 |
| LmnI | GCTCC | 1 cut(s) | 784 |
| Lsp1109I | GCAGC | 1 cut(s) | 223 |
| MaeI | CTAG | 3 cut(s) | 333, 408, 1019 |
| MaeII | ACGT | 1 cut(s) | 1033 |
| MaeIII | GTNAC | 1 cut(s) | 60 |
| MalI | GATC | 8 cut(s) | 342, 401, 482, 801, 819, 864, 992, 1029 |
| MboI | GATC | 8 cut(s) | 340, 399, 480, 799, 817, 862, 990, 1027 |
| MboII | GAAGA | 7 cut(s) | 140, 359, 536, 608, 653, 904, 965 |
| MflI | RGATCY | 1 cut(s) | 399 |
| MhlI | GDGCHC | 2 cut(s) | 789, 880 |
| MluCI | AATT | 1 cut(s) | 214 |
| MlyI | GAGTC | 1 cut(s) | 940 |
| MroNI | GCCGGC | 1 cut(s) | 619 |
| MroXI | GAANNNNTTC | 1 cut(s) | 82 |
| MseI | TTAA | 4 cut(s) | 129, 306, 711, 909 |
| MslI | CAYNNNNRTG | 1 cut(s) | 348 |
| MspA1I | CMGCKG | 1 cut(s) | 486 |
| MspI | CCGG | 3 cut(s) | 575, 620, 776 |
| MspR9I | CCNGG | 1 cut(s) | 781 |
| MvaI | CCWGG | 1 cut(s) | 781 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 47, 64, 964, 1015 |
| NaeI | GCCGGC | 1 cut(s) | 621 |
| NdeII | GATC | 8 cut(s) | 340, 399, 480, 799, 817, 862, 990, 1027 |
| NgoMIV | GCCGGC | 1 cut(s) | 619 |
| NlaIII | CATG | 8 cut(s) | 323, 347, 666, 806, 876, 928, 946, 1048 |
| NspV | TTCGAA | 1 cut(s) | 470 |
| PagI | TCATGA | 1 cut(s) | 343 |
| PceI | AGGCCT | 1 cut(s) | 977 |
| PciSI | GCTCTTC | 1 cut(s) | 948 |
| PdiI | GCCGGC | 1 cut(s) | 621 |
| PdmI | GAANNNNTTC | 1 cut(s) | 82 |
| PfeI | GAWTC | 3 cut(s) | 536, 599, 1022 |
| PkrI | GCNGC | 2 cut(s) | 238, 738 |
| PleI | GAGTC | 1 cut(s) | 940 |
| PpsI | GAGTC | 1 cut(s) | 940 |
| Psp124BI | GAGCTC | 1 cut(s) | 789 |
| Psp1406I | AACGTT | 1 cut(s) | 1033 |
| Psp6I | CCWGG | 1 cut(s) | 779 |
| PspGI | CCWGG | 1 cut(s) | 779 |
| PspPI | GGNCC | 1 cut(s) | 162 |
| PsuI | RGATCY | 1 cut(s) | 399 |
| PvuII | CAGCTG | 1 cut(s) | 486 |
| RsaI | GTAC | 4 cut(s) | 15, 376, 386, 507 |
| RsaNI | GTAC | 4 cut(s) | 14, 375, 385, 506 |
| RseI | CAYNNNNRTG | 1 cut(s) | 348 |
| SacI | GAGCTC | 1 cut(s) | 789 |
| SapI | GCTCTTC | 1 cut(s) | 948 |
| SaqAI | TTAA | 4 cut(s) | 129, 306, 711, 909 |
| SatI | GCNGC | 2 cut(s) | 237, 737 |
| Sau3AI | GATC | 8 cut(s) | 340, 399, 480, 799, 817, 862, 990, 1027 |
| Sau96I | GGNCC | 1 cut(s) | 162 |
| SchI | GAGTC | 1 cut(s) | 940 |
| ScrFI | CCNGG | 1 cut(s) | 781 |
| SduI | GDGCHC | 2 cut(s) | 789, 880 |
| SfuI | TTCGAA | 1 cut(s) | 470 |
| SinI | GGWCC | 1 cut(s) | 162 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 348 |
| SpeI | ACTAGT | 2 cut(s) | 332, 407 |
| Sse9I | AATT | 1 cut(s) | 214 |
| SseBI | AGGCCT | 1 cut(s) | 977 |
| SsiI | CCGC | 3 cut(s) | 564, 638, 737 |
| SspMI | CTAG | 3 cut(s) | 333, 408, 1019 |
| SstI | GAGCTC | 1 cut(s) | 789 |
| StuI | AGGCCT | 1 cut(s) | 977 |
| StyD4I | CCNGG | 1 cut(s) | 779 |
| StyI | CCWWGG | 1 cut(s) | 591 |
| TaaI | ACNGT | 2 cut(s) | 364, 547 |
| TaiI | ACGT | 1 cut(s) | 1036 |
| TaqI | TCGA | 3 cut(s) | 470, 858, 865 |
| TasI | AATT | 1 cut(s) | 214 |
| TatI | WGTACW | 3 cut(s) | 13, 384, 505 |
| TauI | GCSGC | 1 cut(s) | 739 |
| TfiI | GAWTC | 3 cut(s) | 536, 599, 1022 |
| Tru1I | TTAA | 4 cut(s) | 129, 306, 711, 909 |
| Tru9I | TTAA | 4 cut(s) | 129, 306, 711, 909 |
| TseI | GCWGC | 1 cut(s) | 236 |
| TspDTI | ATGAA | 4 cut(s) | 360, 489, 549, 970 |
| TspGWI | ACGGA | 2 cut(s) | 292, 626 |
| VpaK11BI | GGWCC | 1 cut(s) | 162 |
| XmnI | GAANNNNTTC | 1 cut(s) | 82 |
| XspI | CTAG | 3 cut(s) | 333, 408, 1019 |