Domain of unknown function (DUF4408)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48405 AT3G17680 AT3G17680 AT3G17680 |
| fragaria_vesca | FvH4_5g18280 FvH4_5g18280 FvH4_5g18280 FvH4_5g18280 FvH4_5g18280 FvH4_5g18290 |
| malus_domestica | MD06G1238400.v1.1 MD06G1238700.v1.1 MD14G1244700.v1.1 MD14G1244900.v1.1 |
| prunus_persica | Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242300_v2.0.a1 Prupe.5G242600_v2.0.a1 |
| pyrus_communis | pycom06g21390 pycom06g21420 pycom14g20590 |
| rosa_chinensis | RchiOBHm_Chr7g0177291 RchiOBHm_Chr7g0177301 |
| rosa_laevigata | RLG00000005548 |
| rosa_multiflora | Rmu_sc0005310.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00275960 Rroxscaffold_3G00275970 |
| rosa_rugosa | Rorug06G0404500 Rorug06G0404600 Rorug06G0404700 Rorug06G0404800 |
| rosa_samantha | Rh7AG004500 Rh7AG004600 Rh7BG004400 Rh7BG004500 Rh7CG004300 Rh7CG004400 Rh7DG004300 Rh7DG004400 |
| rosa_wichuraiana | Rw7G000370 Rw7G000380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 719, 946, 950 |
| AclI | AACGTT | 1 cut(s) | 1012 |
| AclWI | GGATC | 1 cut(s) | 789 |
| AcuI | CTGAAG | 1 cut(s) | 974 |
| AfaI | GTAC | 6 cut(s) | 337, 361, 376, 386, 507, 544 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 159, 556, 909, 949 |
| AgsI | TTSAA | 5 cut(s) | 19, 103, 471, 871, 940 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 898 |
| AhlI | ACTAGT | 1 cut(s) | 332 |
| AjnI | CCWGG | 1 cut(s) | 761 |
| AluBI | AGCT | 5 cut(s) | 58, 177, 486, 515, 769 |
| AluI | AGCT | 5 cut(s) | 58, 177, 486, 515, 769 |
| Alw26I | GTCTC | 1 cut(s) | 698 |
| AlwI | GGATC | 1 cut(s) | 789 |
| AoxI | GGCC | 1 cut(s) | 954 |
| ApeKI | GCWGC | 1 cut(s) | 236 |
| AseI | ATTAAT | 1 cut(s) | 306 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 537 |
| AspS9I | GGNCC | 1 cut(s) | 162 |
| AsuHPI | GGTGA | 3 cut(s) | 546, 598, 751 |
| AvaII | GGWCC | 1 cut(s) | 162 |
| BaeGI | GKGCMC | 1 cut(s) | 288 |
| BanII | GRGCYC | 1 cut(s) | 859 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 535, 567 |
| BbsI | GAAGAC | 1 cut(s) | 630 |
| BbvI | GCAGC | 1 cut(s) | 223 |
| BccI | CCATC | 1 cut(s) | 365 |
| BceAI | ACGGC | 1 cut(s) | 393 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 382, 416 |
| BciT130I | CCWGG | 1 cut(s) | 763 |
| BclI | TGATCA | 4 cut(s) | 340, 480, 793, 1006 |
| BcoDI | GTCTC | 1 cut(s) | 698 |
| BcuI | ACTAGT | 1 cut(s) | 332 |
| BfaI | CTAG | 4 cut(s) | 333, 770, 998, 1042 |
| BisI | GCNGC | 2 cut(s) | 237, 719 |
| BlsI | GCNGC | 2 cut(s) | 238, 720 |
| BmcAI | AGTACT | 1 cut(s) | 337 |
| Bme1390I | CCNGG | 1 cut(s) | 763 |
| Bme18I | GGWCC | 1 cut(s) | 162 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 898 |
| BmgT120I | GGNCC | 1 cut(s) | 162 |
| BmiI | GGNNCC | 1 cut(s) | 564 |
| BmrFI | CCNGG | 1 cut(s) | 763 |
| BmsI | GCATC | 1 cut(s) | 697 |
| BpiI | GAAGAC | 1 cut(s) | 630 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 551, 583 |
| BsaBI | GATNNNNATC | 2 cut(s) | 795, 798 |
| BsaJI | CCNNGG | 5 cut(s) | 573, 609, 722, 762, 1033 |
| BsaWI | WCCGGW | 1 cut(s) | 556 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 421, 451, 770, 800 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 159, 556, 909, 949 |
| Bse118I | RCCGGY | 1 cut(s) | 601 |
| Bse1I | ACTGG | 1 cut(s) | 736 |
| Bse8I | GATNNNNATC | 2 cut(s) | 795, 798 |
| BseBI | CCWGG | 1 cut(s) | 763 |
| BseDI | CCNNGG | 5 cut(s) | 573, 609, 722, 762, 1033 |
| BseGI | GGATG | 2 cut(s) | 16, 495 |
| BseJI | GATNNNNATC | 2 cut(s) | 795, 798 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 159, 556, 909, 949 |
| BseMII | CTCAG | 1 cut(s) | 941 |
| BseNI | ACTGG | 1 cut(s) | 736 |
| BseRI | GAGGAG | 6 cut(s) | 232, 280, 429, 559, 562, 791 |
| BseSI | GKGCMC | 1 cut(s) | 288 |
| BseXI | GCAGC | 1 cut(s) | 223 |
| BshFI | GGCC | 1 cut(s) | 956 |
| BsiSI | CCGG | 2 cut(s) | 557, 602 |
| BslFI | GGGAC | 2 cut(s) | 725, 1034 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 159, 556, 909, 949 |
| BsmAI | GTCTC | 1 cut(s) | 698 |
| BsmFI | GGGAC | 2 cut(s) | 725, 1034 |
| BsmI | GAATGC | 1 cut(s) | 655 |
| BsnI | GGCC | 1 cut(s) | 956 |
| Bsp1286I | GDGCHC | 2 cut(s) | 288, 859 |
| Bsp143I | GATC | 8 cut(s) | 340, 399, 480, 781, 793, 841, 969, 1006 |
| BspACI | CCGC | 3 cut(s) | 719, 946, 950 |
| BspANI | GGCC | 1 cut(s) | 956 |
| BspCNI | CTCAG | 1 cut(s) | 940 |
| BspHI | TCATGA | 2 cut(s) | 343, 802 |
| BspLI | GGNNCC | 1 cut(s) | 564 |
| BspPI | GGATC | 1 cut(s) | 789 |
| BsrFI | RCCGGY | 1 cut(s) | 601 |
| BsrI | ACTGG | 1 cut(s) | 736 |
| BssAI | RCCGGY | 1 cut(s) | 601 |
| BssECI | CCNNGG | 5 cut(s) | 573, 609, 722, 762, 1033 |
| BssMI | GATC | 8 cut(s) | 340, 399, 480, 781, 793, 841, 969, 1006 |
| Bst2UI | CCWGG | 1 cut(s) | 763 |
| Bst4CI | ACNGT | 3 cut(s) | 356, 447, 1034 |
| Bst6I | CTCTTC | 2 cut(s) | 153, 609 |
| BstC8I | GCNNGC | 3 cut(s) | 488, 686, 948 |
| BstDEI | CTNAG | 1 cut(s) | 927 |
| BstDSI | CCRYGG | 1 cut(s) | 1033 |
| BstEII | GGTNACC | 1 cut(s) | 604 |
| BstF5I | GGATG | 2 cut(s) | 16, 495 |
| BstKTI | GATC | 8 cut(s) | 343, 402, 483, 784, 796, 844, 972, 1009 |
| BstMAI | GTCTC | 1 cut(s) | 698 |
| BstMBI | GATC | 8 cut(s) | 340, 399, 480, 781, 793, 841, 969, 1006 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 47, 64, 994 |
| BstNI | CCWGG | 1 cut(s) | 763 |
| BstPI | GGTNACC | 1 cut(s) | 604 |
| BstSCI | CCNGG | 1 cut(s) | 761 |
| BstSLI | GKGCMC | 1 cut(s) | 288 |
| BstV1I | GCAGC | 1 cut(s) | 223 |
| BstV2I | GAAGAC | 1 cut(s) | 630 |
| BsuRI | GGCC | 1 cut(s) | 956 |
| BtgI | CCRYGG | 1 cut(s) | 1033 |
| BtgZI | GCGATG | 1 cut(s) | 217 |
| BtsCI | GGATG | 2 cut(s) | 16, 495 |
| Cac8I | GCNNGC | 3 cut(s) | 488, 686, 948 |
| CciI | TCATGA | 2 cut(s) | 343, 802 |
| Cfr10I | RCCGGY | 1 cut(s) | 601 |
| Cfr13I | GGNCC | 1 cut(s) | 162 |
| Csp6I | GTAC | 6 cut(s) | 336, 360, 375, 385, 506, 543 |
| CviAII | CATG | 8 cut(s) | 344, 491, 645, 803, 852, 904, 922, 1024 |
| CviQI | GTAC | 6 cut(s) | 336, 360, 375, 385, 506, 543 |
| DdeI | CTNAG | 1 cut(s) | 927 |
| DpnI | GATC | 8 cut(s) | 342, 401, 482, 783, 795, 843, 971, 1008 |
| DpnII | GATC | 8 cut(s) | 340, 399, 480, 781, 793, 841, 969, 1006 |
| DriI | GACNNNNNGTC | 1 cut(s) | 898 |
| Eam1104I | CTCTTC | 2 cut(s) | 153, 609 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 898 |
| EarI | CTCTTC | 2 cut(s) | 153, 609 |
| EciI | GGCGGA | 1 cut(s) | 965 |
| Eco147I | AGGCCT | 1 cut(s) | 956 |
| Eco24I | GRGCYC | 1 cut(s) | 859 |
| Eco47I | GGWCC | 1 cut(s) | 162 |
| Eco57I | CTGAAG | 1 cut(s) | 974 |
| Eco91I | GGTNACC | 1 cut(s) | 604 |
| EcoO65I | GGTNACC | 1 cut(s) | 604 |
| EcoRII | CCWGG | 1 cut(s) | 761 |
| EcoT38I | GRGCYC | 1 cut(s) | 859 |
| FaeI | CATG | 8 cut(s) | 347, 494, 648, 806, 855, 907, 925, 1027 |
| FaqI | GGGAC | 2 cut(s) | 725, 1034 |
| FatI | CATG | 8 cut(s) | 343, 490, 644, 802, 851, 903, 921, 1023 |
| FauI | CCCGC | 1 cut(s) | 939 |
| FbaI | TGATCA | 4 cut(s) | 340, 480, 793, 1006 |
| Fnu4HI | GCNGC | 2 cut(s) | 237, 719 |
| FokI | GGATG | 2 cut(s) | 23, 482 |
| FriOI | GRGCYC | 1 cut(s) | 859 |
| Fsp4HI | GCNGC | 2 cut(s) | 237, 719 |
| FspBI | CTAG | 4 cut(s) | 333, 770, 998, 1042 |
| GluI | GCNGC | 2 cut(s) | 237, 719 |
| HaeIII | GGCC | 1 cut(s) | 956 |
| HapII | CCGG | 2 cut(s) | 557, 602 |
| Hin1II | CATG | 8 cut(s) | 347, 494, 648, 806, 855, 907, 925, 1027 |
| HincII | GTYRAC | 1 cut(s) | 1030 |
| HindII | GTYRAC | 1 cut(s) | 1030 |
| HindIII | AAGCTT | 1 cut(s) | 513 |
| HinfI | GANTC | 4 cut(s) | 533, 581, 925, 1001 |
| HpaI | GTTAAC | 1 cut(s) | 1030 |
| HpaII | CCGG | 2 cut(s) | 557, 602 |
| HphI | GGTGA | 3 cut(s) | 546, 598, 751 |
| Hpy166II | GTNNAC | 2 cut(s) | 87, 1030 |
| Hpy188I | TCNGA | 9 cut(s) | 173, 421, 577, 726, 861, 880, 981, 993, 1006 |
| Hpy188III | TCNNGA | 4 cut(s) | 160, 344, 803, 929 |
| Hpy8I | GTNNAC | 2 cut(s) | 87, 1030 |
| HpyAV | CCTTC | 2 cut(s) | 561, 967 |
| HpyCH4III | ACNGT | 3 cut(s) | 356, 447, 1034 |
| HpyCH4IV | ACGT | 1 cut(s) | 1012 |
| HpyCH4V | TGCA | 2 cut(s) | 428, 684 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 47, 64, 994 |
| HpyF3I | CTNAG | 1 cut(s) | 927 |
| HpySE526I | ACGT | 1 cut(s) | 1012 |
| Hsp92II | CATG | 8 cut(s) | 347, 494, 648, 806, 855, 907, 925, 1027 |
| Ksp22I | TGATCA | 4 cut(s) | 340, 480, 793, 1006 |
| KspAI | GTTAAC | 1 cut(s) | 1030 |
| Kzo9I | GATC | 8 cut(s) | 340, 399, 480, 781, 793, 841, 969, 1006 |
| LmnI | GCTCC | 1 cut(s) | 766 |
| Lsp1109I | GCAGC | 1 cut(s) | 223 |
| LweI | GCATC | 1 cut(s) | 697 |
| MaeI | CTAG | 4 cut(s) | 333, 770, 998, 1042 |
| MaeII | ACGT | 1 cut(s) | 1012 |
| MaeIII | GTNAC | 2 cut(s) | 60, 604 |
| MalI | GATC | 8 cut(s) | 342, 401, 482, 783, 795, 843, 971, 1008 |
| MboI | GATC | 8 cut(s) | 340, 399, 480, 781, 793, 841, 969, 1006 |
| MboII | GAAGA | 8 cut(s) | 140, 359, 536, 539, 542, 626, 635, 883 |
| MhlI | GDGCHC | 2 cut(s) | 288, 859 |
| MluCI | AATT | 3 cut(s) | 214, 464, 935 |
| MlyI | GAGTC | 2 cut(s) | 575, 919 |
| MmeI | TCCRAC | 1 cut(s) | 858 |
| MroXI | GAANNNNTTC | 1 cut(s) | 537 |
| MseI | TTAA | 4 cut(s) | 129, 306, 888, 1029 |
| MslI | CAYNNNNRTG | 2 cut(s) | 348, 801 |
| MspA1I | CMGCKG | 2 cut(s) | 486, 946 |
| MspI | CCGG | 2 cut(s) | 557, 602 |
| MspR9I | CCNGG | 1 cut(s) | 763 |
| Mva1269I | GAATGC | 1 cut(s) | 655 |
| MvaI | CCWGG | 1 cut(s) | 763 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 47, 64, 994 |
| NdeII | GATC | 8 cut(s) | 340, 399, 480, 781, 793, 841, 969, 1006 |
| NlaIII | CATG | 8 cut(s) | 347, 494, 648, 806, 855, 907, 925, 1027 |
| NlaIV | GGNNCC | 1 cut(s) | 564 |
| NmuCI | GTSAC | 1 cut(s) | 604 |
| PagI | TCATGA | 2 cut(s) | 343, 802 |
| PceI | AGGCCT | 1 cut(s) | 956 |
| PctI | GAATGC | 1 cut(s) | 655 |
| PdmI | GAANNNNTTC | 1 cut(s) | 537 |
| PfeI | GAWTC | 2 cut(s) | 533, 1001 |
| PkrI | GCNGC | 2 cut(s) | 238, 720 |
| PleI | GAGTC | 2 cut(s) | 575, 919 |
| PpsI | GAGTC | 2 cut(s) | 575, 919 |
| PshBI | ATTAAT | 1 cut(s) | 306 |
| Psp1406I | AACGTT | 1 cut(s) | 1012 |
| Psp6I | CCWGG | 1 cut(s) | 761 |
| PspEI | GGTNACC | 1 cut(s) | 604 |
| PspGI | CCWGG | 1 cut(s) | 761 |
| PspN4I | GGNNCC | 1 cut(s) | 564 |
| PspPI | GGNCC | 1 cut(s) | 162 |
| PvuII | CAGCTG | 1 cut(s) | 486 |
| RsaI | GTAC | 6 cut(s) | 337, 361, 376, 386, 507, 544 |
| RsaNI | GTAC | 6 cut(s) | 336, 360, 375, 385, 506, 543 |
| RseI | CAYNNNNRTG | 2 cut(s) | 348, 801 |
| SaqAI | TTAA | 4 cut(s) | 129, 306, 888, 1029 |
| SatI | GCNGC | 2 cut(s) | 237, 719 |
| Sau3AI | GATC | 8 cut(s) | 340, 399, 480, 781, 793, 841, 969, 1006 |
| Sau96I | GGNCC | 1 cut(s) | 162 |
| ScaI | AGTACT | 1 cut(s) | 337 |
| SchI | GAGTC | 2 cut(s) | 575, 919 |
| ScrFI | CCNGG | 1 cut(s) | 763 |
| SduI | GDGCHC | 2 cut(s) | 288, 859 |
| SfaNI | GCATC | 1 cut(s) | 697 |
| SinI | GGWCC | 1 cut(s) | 162 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 348, 801 |
| SpeI | ACTAGT | 1 cut(s) | 332 |
| Sse9I | AATT | 3 cut(s) | 214, 464, 935 |
| SseBI | AGGCCT | 1 cut(s) | 956 |
| SsiI | CCGC | 3 cut(s) | 719, 946, 950 |
| SspMI | CTAG | 4 cut(s) | 333, 770, 998, 1042 |
| StuI | AGGCCT | 1 cut(s) | 956 |
| StyD4I | CCNGG | 1 cut(s) | 761 |
| TaaI | ACNGT | 3 cut(s) | 356, 447, 1034 |
| TaiI | ACGT | 1 cut(s) | 1015 |
| TaqI | TCGA | 2 cut(s) | 402, 844 |
| TasI | AATT | 3 cut(s) | 214, 464, 935 |
| TatI | WGTACW | 4 cut(s) | 335, 359, 384, 505 |
| TauI | GCSGC | 1 cut(s) | 721 |
| TfiI | GAWTC | 2 cut(s) | 533, 1001 |
| Tru1I | TTAA | 4 cut(s) | 129, 306, 888, 1029 |
| Tru9I | TTAA | 4 cut(s) | 129, 306, 888, 1029 |
| TseFI | GTSAC | 1 cut(s) | 604 |
| TseI | GCWGC | 1 cut(s) | 236 |
| Tsp45I | GTSAC | 1 cut(s) | 604 |
| TspDTI | ATGAA | 3 cut(s) | 360, 489, 949 |
| TspGWI | ACGGA | 1 cut(s) | 608 |
| VpaK11BI | GGWCC | 1 cut(s) | 162 |
| VspI | ATTAAT | 1 cut(s) | 306 |
| XmnI | GAANNNNTTC | 1 cut(s) | 537 |
| XspI | CTAG | 4 cut(s) | 333, 770, 998, 1042 |
| ZrmI | AGTACT | 1 cut(s) | 337 |