AT3G27670

Protein of unknown function (DUF3730)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
10245112 .. 10253308
8197 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G27670.1

Sequence Viewer

Length: 5526 bp
ATGGCCTCATACGCTACGTTACTGGAGAAAACTCGCGTACCTCAACCTTCTATACAAAGATTCGCAGTAATCTCCGTCTTCTCCAAGTTACGATCTGCTCCAGAACAATTTGGATCAGAAGCCGAAGCCGGAAGAGAAGCTATCTCCTTCTGCCTCACTTCTGAATCTATCACTGTCGTTGATCAATCCGTTCATGAGCTATGTCGATTAGTATCAGACTCAGTTTTAGACCTCTCTCGTGGTTTGCTAGAACTTCAATCAGCTCTCGAAGGATGCGATTCGAAATTGGTTTCGCTGTTCGTGAAAGGGTTAGGGTTTTTGATTCGTATTGGTTATGAACGGAATAATGGGAACTGGAAGTTTAATTCGACGGAGAATCATCCGTTTGTTAGGATTCAATCTAGCCGAGTGGAGACACAGACGGAGCTTCTTCATCAAGTATCACTCTTTGTGATGCATAATCGAAGATTAGGAATGGTGGGAGTATGTGAATTCTTGGAGCCGTTCTTGAATTTCACTATACTGCGGATTCCGCTTTCAGATTCGTCTTCATCGTTGTTTGCGAGGGAGTTGATTTCATCAATGGCTTCCCTTTGTTGCTCATCCCGCCACGAAGCACTACCGATATTCAGATTGCTTATGCGATGTCTAAAATATATCCCGGGAAATAATCTGGAAGTAATTGTCAAGATCCTAGTGGATGCCTACACTGTGGTTGTGAGAGACTTGGTTGGAACCGGATTGGAAGTAACAGAAGTTCATTTGCTCGGTGTGCAACTGGTGGATGGCGTACTTTTTCTTTGCGCTTCTCCTCATGTACAAACAACCGAACAAGAGTCTGTTATCGAATCTTTGAAGCACTTGTTGGCTGTTCAGAAAGACCTTGGATTAGCATATTCACATGATTTATCCTTGGTGGTTCTCTCGCTAGTTTTCATGCTTGCCAAATCTACTGTCGAGCATGAACAACTCTGTATTCTAAAGTTTCTGCTTTTTCTGCTCAAATGGAAAACTGAAAGTGAAAACTTGTCGGTTAAGGATGCGGCTGGTTCAAGTGTGGAGTCTCTATTATTGTTCCCTATCACCGCACTGATGTCTTCTCCTTCTAAATCAATCAAAGTAGCAGCAAGTAAGGTTCTTTCCATCGTAGAAAATTTCTTGGTAACAGTGTCAAATGCACCAAAGATTGAGGTCCACACAAGTAAGGGAGATTCACCACTCAGCAGGGTGGGCTCTGTCGTATTTAGGTTCATGCAGCAACTCTGGCATCAGAATGATTACACACCTTCCACGTCTTCCTTCCTCAGAGTGGCTTACACCAATGGAAGTGAAAAACAGGAAACTTATCTAGGACCAGTGACTTGGAATTCACTACTTAGGGAACACGCTGAACGGTTTTGGGATAAAAAAAAGTTGTCTGCGTCGTTTTGTCTTTCACAAGAGATACCTATTTTACTTGGTGCTGTTGCTGGTGTCATGGTGATGCACCCGTCACTAGGAGCTGATGCTATTGGTTCTTTGACTATTATTGGTGGCATTGATTCTAAGATGAGTGTCCCGCTGTTGCTAGCTGTTCTATATTTCAGCAACTTGTTATCTCGAACTAACGTCCCTTGTCAGAGTCTATTGTCAAAACTTCTGGGGTTGCTCCCATCACTAGCTGCACAACAGGTGATGATTCCACTTGTAGTTCAGACTATTACTCCAATGCTACGCAAGGATGCCAAAGGTCTGTTGTATGCTACAGCTATTAGATTACTTTGCCAGACCTGGGTAGTCAATGACCGTGCCTTTTCGAGTTTGCAAGAGGTGTTACGCCCGCAAGGATTTATAGAATATATTTCAGAGAGACATATCTGCATTAGTATGGCTGCTTCCATCCATGATGTATGCAAGAGACACCCTGATAGAGGAGTAGACCTAATCTTGTCCGTTCAGGCCTGTATAGAAAGCCAAAACTGTCCAGTTAGAGCCCTTGGTTTTCAGAGTCTTTCGCATCTGTGTGAAGCCGATGTCATTGATTTCTATACTGCATGGGATGTCATTAAGAAACATGCTCAACATATCAAACTGGATCCTCTCCTTGCTTATAGTGTATGCCATCTTCTAAAGTGGGGTGCCATGGATGCCGAAGCATATCCTGAAGATGCAGAAAACGTTTTGAACATTTTGTGGGAAATTGGGAGCTCTATGCAGAAGCCTCATGATTCCCAATGGACAAAGGCAAGAGTCTCTGCCATAGTGGCCCTGGGTCAATATGAGGTATCATTTATGGAAAACAAGTTTTCTGACTTCAACAAGAATTGTACATATTTACTCTTCTCGGAGACAAATGCGGAAATTCTGAATGCTTTAGAAGACCTTTCAATCAAAATCATGATTCACGAGCACAGCGTCCGGCGTAGATATGTAAGAGAGAAGAAAGTTCCTGGTAGTAAGATTGAAAAGCTGCTTGATGTGATACCTCAGGTCATCTTCCCTGCAGGGAAAGAAATAAAGACTGGAGAACTACCTGGTGCGGCATTACTATGTCTATCTTATAACCCCAGAGATGTGAAGTTTGGGTCATCAAGAAGCTTTCATGATGTTCATTTTCAATACGAGGAGGCATTTAGAGTAGTAGTCAAATCTCTCCAGCTCTCAAGAAATATTTCCCTTGCTCTTATTTCCTTGCAATCACTGAAAGCTTTTATGCGGCGTTGGATGAGAGCGAATATATTGTCCATTGATGCAACGACTAAAGAATTATCATCGGATAAGACCTCTAAAGCTACAAACAACATCATGAAGAGTTTGGTACATATGGCTGAAGAAGCTCTTCCCAGGTGTGCAGAAAACATAGCACTGGCGCTGGGTGCACTATGTGCAGCTTTGCCAGCTGCTTCTCATAATATTAAAGCGTCTGCATCAAAATTTCTGTTGAGTTGGTTGTTGGAGCATGAGCATGAACACCGTCAGTGGACGGCTGGTATTTCTCTTGGATTGATTTCGTCGTCCCTACACGTAACTGACCACAAGCAGAAATTTCAGAATATATCTGGGCTTCTTGAGGTTTTGTGTAGCAGTAAAAGCACTCTTGTAAAAGGAGCCTGTGGGGTTGGATTGGGTTTTTCATGCCAAGATCTGCTCACTCGGACTGAAGCCTCTGCGAGCTCTGATATAGACAGTGACTCCTACAGGAACCAAGAAGAACGGCTCTTGGGAAGGATAGTGAGGTTGCTATCTTCTATATTACATGGTTTCCTGCACACTCCGTGTGATATCCTAGAAAGCTTGTCTGCACTGTTCCCCCCTGGAGAGGAAGACAACGTTATAGGTTTACCTCAGCTGTTGGATGAGAGTTCTGATGATTTTGATGATGATACATGGGGTATTGCTGGACTCATTATAGGTTTGGGGATGTCAGTTGGTGCAATATACAGAGCTGGGAAGAAAGACGCTGTTGTAAAGATTAAAAATCTGATTGTATCATGGATCCCATATGCAGATTCTCTGAAGCAAACCTCGGGTTCTAATAGTAAGGTATCAGTGAGACTGTTTTCAGTCGGTTCCTGCCTTGCACTCCCAATTGTGATAACTTTCTGCCAAAAAGTAGAACTGTTTGATGCACATGAGGTAGATGATATAATCGGTTGTTTCAAGGACCTTATTTCCGAGTTGCTAATCGTTAGAAAGTCTGGTGCTTTACGTAAGAGGTTGTTGATGGCTTCCTGTATTGGGGCGGGAGACCTCCTTGGTTCTGTATTGAATGAAGGTATCCACCCTGTTAAGATTGAGTCTGTAAAAGAGTTACTAGAACTGTTCAAGAAATGTTACTCTGGACTTTACCCACCGGTTGCTCACTTTGGAGGCATGCTCGGAGTTGTTAATGTTTTAGGAGCAGGTGCTGGGAATTTGGTGTATTCTCATCCTCGACCCCGTGCTCCTCCAGCCAGTTCTGAGGAGAACGAAATCTCTTATGTATCAGGTCCTTTGCTTTCAAACGCATATTTTACTCAGCAGTTGACGCCAGTTGTGCAAGAAATATTTCTTATCGCACAAAATACCAAGGATCGCCAGCTCCAACATTATGCTGCATGGGCAATCTCAATTCTTAGAACTTACATGCGGTCAGGGGAATCGTCAAGTCTCAGCAATGAAAACCAATCTGATGACTCTGACCGTAATTCCATCTCTCACAATGTTCCTGAACATACCATGGTCATGAAACTTGCTCAAGGCCTGACAAATCCAAGTTTTCCTTTGGCGGGTAGCCCTTTGAATATTGGCACAATGGCAAGTGCTTTGCGGTGTTTGTCTCATGCTCCGAGATTGCCAAACTTGGACTGGGGAGCAACAATAAGGCGTTTAATGAAACAAGAGACTCAGACTGATGTAACGCAATCAGGCGATGTTCCTAAGGAAATAACTCTTAGGGAAGAGTGCTTCAAATTTTCATTAGCCCACGCAAGCGAATTTGATGAACTTCTAGCTTTTCTGGACGAACTGTCGGAACTATCGAGATTCAAGGCACTAGAGGAGAGTCTTCAGTCGTGCCTGCTCTGTCATCTAGGGGGTTTAATGAGAATATTCTCAGGTTCAAGAATGAATAAATTGTTTGACGATGTCTCTTGCTTTGTAGTCTCGCTATCATCAGACCAAACATATAGCTGTGATCAGAAGAGCTCACTGAGGGTCTCTTGTTGGAAGGGTCTGAGTCAGTGTCTTGAAGAAACTTCACTTGAATCTTCAGAATACGTCACAAAGATTGAAAAATGCATAGAGTTGCTTTTTGCTGTCTTACCAGTAGCATCACAATCTCCTAGAGCAGATCAGATGGGTTCGGTGAAAGAGTGGTCAGAGGCAGTTACATGTTTGCAGAAGTCGCATCGGGATTGGTTATACAAATTCCTACAGGTTTCAAATCTTGAACCTGGAAACGAAAAGACTAACTTCCAAGGTGATCTAAAGAAGATCCAGGCAAAAGCCAAGCTAGCAAAACTTGGCTCAGTTCCATTTTCCGAGTTAGGAAAATTGAAAGCTATTATATTAAATTGTGAAGAGTCAGATATCTGGGACGTGTTGATTGAGATAGTAGCGGCTCTGCATCACGCTGAAGGAGGAATCAAGAGACAGTGGCTCATTGATGCAGTTGAAATCAGCTGCGTTTCTAGCCATCCTTCCACTGCTATTATCTTCGTCGGCCTTCTTTCTAGTATCTGCTGCGAATACATGCCGTTTCTCAATTTAGACCGCTCCACGGTGTTGAGCGATATGTCTGTTACCGTAACTTCTCTCCTTTCTGATCCAAGCTATGAAGTGGTCACAGAGCCTTTCATCTCGTTTCTATGGACTTCATTGGAACGTGTTTACAGTTTTGCAACTGAATCTGACGCTAATGCAAGGCTAAGCTCACAGCAAATTGCGCAAAGCGAGAGAGATAAAGCACCAATGCTTGTGAAAGTGATGCATTACATTTGTGTAGCCTTCAGAGATCATTTGCCTCTTGAGAAACAGCTTAGACTTGCTTCTATGGACATGTCTTAA

Protein Analysis

1841

Amino Acids

203.75

Weight (kDa)

6.16

Isoelectric Point (pI)

47.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3730 PF12530 82 - 353 4.1e-53 Focadhesin/RST1, DUF3730
DUF3730 PF12530 532 - 750 8.2e-68 Focadhesin/RST1, DUF3730
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2541
AarI CACCTGC 1 cut(s) 3872
Acc16I TGCGCA 1 cut(s) 5406
Acc36I ACCTGC 1 cut(s) 3872
AccB1I GGYRCC 1 cut(s) 2117
AccBSI CCGCTC 1 cut(s) 5235
AccI GTMKAC 1 cut(s) 1917
AccII CGCG 1 cut(s) 36
AclI AACGTT 2 cut(s) 2157, 3309
AclWI GGATC 9 cut(s) 121, 685, 2069, 2082, 3469, 3482, 4059, 4948, 5279
AcuI CTGAAG 8 cut(s) 2163, 2829, 3159, 3515, 4511, 4713, 5115, 5452
AcyI GRCGYC 1 cut(s) 4007
AdeI CACNNNGTG 2 cut(s) 2864, 3255
AfaI GTAC 5 cut(s) 39, 792, 819, 2308, 2799
AfiI CCNNNNNNNGG 8 cut(s) 1309, 1496, 1771, 1910, 3298, 3717, 4247, 5239
AflIII ACRYGT 5 cut(s) 3001, 4850, 5058, 5344, 5517
AgeI ACCGGT 1 cut(s) 3832
AhdI GACNNNNNGTC 1 cut(s) 4486
AjiI CACGTC 2 cut(s) 1293, 5059
AjnI CCWGG 8 cut(s) 1769, 2247, 2428, 2512, 2822, 3292, 4912, 4956
AjuI GAANNNNNNNTTGG 2 cut(s) 848, 880
Alw21I GWGCWC 6 cut(s) 2189, 2391, 2860, 3155, 3925, 4667
Alw44I GTGCAC 1 cut(s) 2856
AlwI GGATC 9 cut(s) 121, 685, 2069, 2082, 3469, 3482, 4059, 4948, 5279
AlwNI CAGNNNCTG 1 cut(s) 3887
Ama87I CYCGRG 2 cut(s) 661, 3505
AoxI GGCC 5 cut(s) 3, 1938, 2244, 4219, 5182
ApaLI GTGCAC 1 cut(s) 2856
ArsI GACNNNNNNTTYG 4 cut(s) 939, 971, 2705, 2737
AsiGI ACCGGT 1 cut(s) 3832
Asp700I GAANNNNTTC 3 cut(s) 2650, 2817, 4026
AspLEI GCGC 3 cut(s) 806, 2851, 5407
AspS9I GGNCC 5 cut(s) 1192, 1352, 2245, 3643, 3968
AsuC2I CCSGG 2 cut(s) 662, 663
AsuHPI GGTGA 6 cut(s) 1075, 1206, 1492, 1684, 4837, 4952
AsuII TTCGAA 1 cut(s) 281
AsuNHI GCTAGC 2 cut(s) 1567, 4972
AvaI CYCGRG 2 cut(s) 661, 3505
AvaII GGWCC 4 cut(s) 1192, 1352, 3643, 3968
AxyI CCTNAGG 2 cut(s) 2466, 4398
BaeGI GKGCMC 1 cut(s) 2860
BaeI ACNNNNGTAYC 2 cut(s) 21, 54
BamHI GGATCC 2 cut(s) 2074, 3474
BanI GGYRCC 1 cut(s) 2117
BanII GRGCYC 5 cut(s) 1235, 1975, 2189, 3155, 4667
BarI GAAGNNNNNNTAC 4 cut(s) 1858, 1890, 2088, 2120
BauI CACGAG 2 cut(s) 237, 2384
BbsI GAAGAC 7 cut(s) 70, 540, 1089, 1287, 2364, 3309, 4517
Bbv12I GWGCWC 6 cut(s) 2189, 2391, 2860, 3155, 3925, 4667
BbvCI CCTCAGC 1 cut(s) 3324
BccI CCATC 9 cut(s) 779, 1151, 1660, 1886, 2109, 3697, 4178, 4810, 5163
BceAI ACGGC 4 cut(s) 487, 2979, 3209, 5200
BciT130I CCWGG 8 cut(s) 1771, 2249, 2430, 2514, 2824, 3294, 4914, 4958
BciVI GTATCC 1 cut(s) 3767
BclI TGATCA 2 cut(s) 181, 4654
BcnI CCSGG 2 cut(s) 662, 663
BfmI CTRYAG 4 cut(s) 1743, 2481, 3175, 4892
BfoI RGCGCY 1 cut(s) 2852
BfuAI ACCTGC 1 cut(s) 3872
BfuI GTATCC 1 cut(s) 3767
BglI GCCNNNNNGGC 1 cut(s) 2243
BglII AGATCT 1 cut(s) 3121
BlpI GCTNAGC 1 cut(s) 5387
Bme18I GGWCC 4 cut(s) 1192, 1352, 3643, 3968
BmeRI GACNNNNNGTC 1 cut(s) 4486
BmeT110I CYCGRG 2 cut(s) 661, 3505
BmgBI CACGTC 2 cut(s) 1293, 5059
BmgT120I GGNCC 5 cut(s) 1192, 1352, 2245, 3643, 3968
BmiI GGNNCC 8 cut(s) 501, 736, 2076, 2119, 3088, 3182, 3476, 3550
BmrI ACTGGG 1 cut(s) 4336
BmtI GCTAGC 2 cut(s) 1571, 4976
BmuI ACTGGG 1 cut(s) 4336
BpiI GAAGAC 7 cut(s) 70, 540, 1089, 1287, 2364, 3309, 4517
BplI GAGNNNNNCTC 2 cut(s) 3840, 3872
BpmI CTGGAG 6 cut(s) 44, 84, 2523, 2618, 3315, 3912
Bpu10I CCTNAGC 1 cut(s) 3324
Bpu1102I GCTNAGC 1 cut(s) 5387
Bpu14I TTCGAA 1 cut(s) 281
BpuEI CTTGAG 4 cut(s) 2626, 3068, 4200, 5507
BpuMI CCSGG 2 cut(s) 662, 663
BsaAI YACGTR 2 cut(s) 3004, 3689
BsaBI GATNNNNATC 1 cut(s) 211
BsaHI GRCGYC 1 cut(s) 4007
BsaI GGTCTC 2 cut(s) 3720, 4681
BsaWI WCCGGW 2 cut(s) 737, 3832
BsaXI ACNNNNNCTCC 4 cut(s) 1687, 1717, 3155, 3185
Bsc4I CCNNNNNNNGG 8 cut(s) 1309, 1496, 1771, 1910, 3298, 3717, 4247, 5239
Bse118I RCCGGY 1 cut(s) 3832
Bse21I CCTNAGG 2 cut(s) 2466, 4398
Bse3DI GCAATG 1 cut(s) 4141
Bse8I GATNNNNATC 1 cut(s) 211
BseBI CCWGG 8 cut(s) 1771, 2249, 2430, 2514, 2824, 3294, 4914, 4958
BseJI GATNNNNATC 1 cut(s) 211
BseLI CCNNNNNNNGG 8 cut(s) 1309, 1496, 1771, 1910, 3298, 3717, 4247, 5239
BseMI GCAATG 1 cut(s) 4141
BseRI GAGGAG 6 cut(s) 801, 1926, 2618, 3915, 3956, 4532
BseSI GKGCMC 1 cut(s) 2860
BseYI CCCAGC 3 cut(s) 2851, 3425, 3887
BsgI GTGCAG 5 cut(s) 1647, 2850, 2886, 3230, 3264
Bsh1236I CGCG 1 cut(s) 36
BshFI GGCC 5 cut(s) 5, 1940, 2246, 4221, 5184
BshNI GGYRCC 1 cut(s) 2117
BshTI ACCGGT 1 cut(s) 3832
BsiHKAI GWGCWC 6 cut(s) 2189, 2391, 2860, 3155, 3925, 4667
BsiHKCI CYCGRG 2 cut(s) 661, 3505
BsiSI CCGG 5 cut(s) 129, 662, 738, 2398, 3833
BslFI GGGAC 4 cut(s) 1541, 1595, 2980, 5069
BslI CCNNNNNNNGG 8 cut(s) 1309, 1496, 1771, 1910, 3298, 3717, 4247, 5239
BsmFI GGGAC 4 cut(s) 1541, 1595, 2980, 5069
BsmI GAATGC 1 cut(s) 2353
BsnI GGCC 5 cut(s) 5, 1940, 2246, 4221, 5184
Bso31I GGTCTC 2 cut(s) 3720, 4681
BsoBI CYCGRG 2 cut(s) 661, 3505
Bsp119I TTCGAA 1 cut(s) 281
Bsp1286I GDGCHC 8 cut(s) 1235, 1975, 2189, 2391, 2860, 3155, 3925, 4667
Bsp1407I TGTACA 2 cut(s) 817, 2306
Bsp1720I GCTNAGC 1 cut(s) 5387
Bsp19I CCATGG 2 cut(s) 2121, 4197
BspANI GGCC 5 cut(s) 5, 1940, 2246, 4221, 5184
BspFNI CGCG 1 cut(s) 36
BspHI TCATGA 6 cut(s) 193, 2203, 2376, 2581, 2784, 4203
BspLI GGNNCC 8 cut(s) 501, 736, 2076, 2119, 3088, 3182, 3476, 3550
BspMAI CTGCAG 1 cut(s) 2485
BspMI ACCTGC 1 cut(s) 3872
BspOI GCTAGC 2 cut(s) 1571, 4976
BspPI GGATC 9 cut(s) 121, 685, 2069, 2082, 3469, 3482, 4059, 4948, 5279
BspQI GCTCTTC 2 cut(s) 2823, 4655
BspT104I TTCGAA 1 cut(s) 281
BspT107I GGYRCC 1 cut(s) 2117
BspTNI GGTCTC 2 cut(s) 3720, 4681
BsrBI CCGCTC 1 cut(s) 5235
BsrDI GCAATG 1 cut(s) 4141
BsrFI RCCGGY 1 cut(s) 3832
BsrGI TGTACA 2 cut(s) 817, 2306
BssAI RCCGGY 1 cut(s) 3832
BssNI GRCGYC 1 cut(s) 4007
BssSI CACGAG 2 cut(s) 237, 2384
BssT1I CCWWGG 8 cut(s) 883, 912, 1975, 2121, 3733, 4047, 4197, 4936
Bst2BI CACGAG 2 cut(s) 237, 2384
Bst2UI CCWGG 8 cut(s) 1771, 2249, 2430, 2514, 2824, 3294, 4914, 4958
Bst6I CTCTTC 7 cut(s) 127, 2324, 2783, 2823, 4413, 4655, 5034
BstACI GRCGYC 1 cut(s) 4007
BstAPI GCANNNNNTGC 1 cut(s) 2864
BstAUI TGTACA 2 cut(s) 817, 2306
BstBAI YACGTR 2 cut(s) 3004, 3689
BstBI TTCGAA 1 cut(s) 281
BstDSI CCRYGG 3 cut(s) 2121, 4197, 5238
BstENI CCTNNNNNAGG 1 cut(s) 1908
BstFNI CGCG 1 cut(s) 36
BstH2I RGCGCY 1 cut(s) 2852
BstHHI GCGC 3 cut(s) 806, 2851, 5407
BstNI CCWGG 8 cut(s) 1771, 2249, 2430, 2514, 2824, 3294, 4914, 4958
BstNSI RCATGY 6 cut(s) 2057, 3856, 4108, 4854, 5215, 5521
BstSFI CTRYAG 4 cut(s) 1743, 2481, 3175, 4892
BstSLI GKGCMC 1 cut(s) 2860
BstSNI TACGTA 1 cut(s) 3689
BstUI CGCG 1 cut(s) 36
BstV2I GAAGAC 7 cut(s) 70, 540, 1089, 1287, 2364, 3309, 4517
BstX2I RGATCY 5 cut(s) 690, 2074, 3121, 3474, 4953
BstXI CCANNNNNNTGG 1 cut(s) 1362
BstYI RGATCY 5 cut(s) 690, 2074, 3121, 3474, 4953
Bsu36I CCTNAGG 2 cut(s) 2466, 4398
BsuI GTATCC 1 cut(s) 3767
BsuRI GGCC 5 cut(s) 5, 1940, 2246, 4221, 5184
BtgI CCRYGG 3 cut(s) 2121, 4197, 5238
BtgZI GCGATG 2 cut(s) 658, 4404
BtrI CACGTC 2 cut(s) 1293, 5059
BtsI GCAGTG 1 cut(s) 5163
BveI ACCTGC 1 cut(s) 3872
CaiI CAGNNNCTG 1 cut(s) 3887
CciI TCATGA 6 cut(s) 193, 2203, 2376, 2581, 2784, 4203
CfoI GCGC 3 cut(s) 806, 2851, 5407
Cfr10I RCCGGY 1 cut(s) 3832
Cfr13I GGNCC 5 cut(s) 1192, 1352, 2245, 3643, 3968
Cfr9I CCCGGG 1 cut(s) 661
CseI GACGC 6 cut(s) 1410, 2383, 2889, 3446, 4015, 5381
CsiI ACCWGGT 1 cut(s) 2512
Csp6I GTAC 5 cut(s) 38, 791, 818, 2307, 2798
CspAI ACCGGT 1 cut(s) 3832
CviQI GTAC 5 cut(s) 38, 791, 818, 2307, 2798
DraIII CACNNNGTG 2 cut(s) 2864, 3255
DriI GACNNNNNGTC 1 cut(s) 4486
Eam1104I CTCTTC 7 cut(s) 127, 2324, 2783, 2823, 4413, 4655, 5034
Eam1105I GACNNNNNGTC 1 cut(s) 4486
EarI CTCTTC 7 cut(s) 127, 2324, 2783, 2823, 4413, 4655, 5034
Ecl136II GAGCTC 3 cut(s) 2187, 3153, 4665
Eco105I TACGTA 1 cut(s) 3689
Eco130I CCWWGG 8 cut(s) 883, 912, 1975, 2121, 3733, 4047, 4197, 4936
Eco147I AGGCCT 2 cut(s) 1940, 4221
Eco24I GRGCYC 5 cut(s) 1235, 1975, 2189, 3155, 4667
Eco31I GGTCTC 2 cut(s) 3720, 4681
Eco32I GATATC 2 cut(s) 3262, 5050
Eco47I GGWCC 4 cut(s) 1192, 1352, 3643, 3968
Eco53kI GAGCTC 3 cut(s) 2187, 3153, 4665
Eco57I CTGAAG 8 cut(s) 2163, 2829, 3159, 3515, 4511, 4713, 5115, 5452
Eco81I CCTNAGG 2 cut(s) 2466, 4398
Eco88I CYCGRG 2 cut(s) 661, 3505
EcoICRI GAGCTC 3 cut(s) 2187, 3153, 4665
EcoNI CCTNNNNNAGG 1 cut(s) 1908
EcoO109I RGGNCCY 2 cut(s) 3643, 3968
EcoRI GAATTC 2 cut(s) 491, 1366
EcoRII CCWGG 8 cut(s) 1769, 2247, 2428, 2512, 2822, 3292, 4912, 4956
EcoRV GATATC 2 cut(s) 3262, 5050
EcoT14I CCWWGG 8 cut(s) 883, 912, 1975, 2121, 3733, 4047, 4197, 4936
EcoT22I ATGCAT 3 cut(s) 459, 4760, 5451
EcoT38I GRGCYC 5 cut(s) 1235, 1975, 2189, 3155, 4667
ErhI CCWWGG 8 cut(s) 883, 912, 1975, 2121, 3733, 4047, 4197, 4936
FalI AAGNNNNNCTT 6 cut(s) 2802, 2834, 4225, 4257, 4916, 4948
FaqI GGGAC 4 cut(s) 1541, 1595, 2980, 5069
FauI CCCGC 5 cut(s) 614, 1566, 1827, 3715, 4240
FauNDI CATATG 2 cut(s) 2802, 3481
FbaI TGATCA 2 cut(s) 181, 4654
FblI GTMKAC 1 cut(s) 1917
FriOI GRGCYC 5 cut(s) 1235, 1975, 2189, 3155, 4667
FspI TGCGCA 1 cut(s) 5406
GlaI GCGC 3 cut(s) 805, 2850, 5406
GsaI CCCAGC 3 cut(s) 2855, 3429, 3891
GsuI CTGGAG 6 cut(s) 44, 84, 2523, 2618, 3315, 3912
HaeII RGCGCY 1 cut(s) 2852
HaeIII GGCC 5 cut(s) 5, 1940, 2246, 4221, 5184
HapII CCGG 5 cut(s) 129, 662, 738, 2398, 3833
HgaI GACGC 6 cut(s) 1410, 2383, 2889, 3446, 4015, 5381
HhaI GCGC 3 cut(s) 806, 2851, 5407
Hin1I GRCGYC 1 cut(s) 4007
Hin6I GCGC 3 cut(s) 804, 2849, 5405
HinP1I GCGC 3 cut(s) 804, 2849, 5405
HincII GTYRAC 1 cut(s) 4005
HindII GTYRAC 1 cut(s) 4005
HindIII AAGCTT 3 cut(s) 2575, 2685, 3271
HpaII CCGG 5 cut(s) 129, 662, 738, 2398, 3833
HphI GGTGA 6 cut(s) 1075, 1206, 1492, 1684, 4837, 4952
Hpy166II GTNNAC 7 cut(s) 1195, 1918, 2858, 2961, 3320, 4005, 5350
Hpy8I GTNNAC 7 cut(s) 1195, 1918, 2858, 2961, 3320, 4005, 5350
Hpy99I CGWCG 4 cut(s) 373, 1426, 2995, 5183
Hsp92I GRCGYC 1 cut(s) 4007
HspAI GCGC 3 cut(s) 804, 2849, 5405
Ksp22I TGATCA 2 cut(s) 181, 4654
LguI GCTCTTC 2 cut(s) 2823, 4655
MabI ACCWGGT 1 cut(s) 2512
MbiI CCGCTC 1 cut(s) 5235
MfeI CAATTG 1 cut(s) 3567
MflI RGATCY 5 cut(s) 690, 2074, 3121, 3474, 4953
MhlI GDGCHC 8 cut(s) 1235, 1975, 2189, 2391, 2860, 3155, 3925, 4667
MmeI TCCRAC 8 cut(s) 712, 2681, 2913, 3079, 3312, 4087, 4470, 4664
Mph1103I ATGCAT 3 cut(s) 459, 4760, 5451
MroXI GAANNNNTTC 3 cut(s) 2650, 2817, 4026
MslI CAYNNNNRTG 7 cut(s) 1272, 1481, 1865, 2001, 2527, 2943, 4202
MspA1I CMGCKG 4 cut(s) 1561, 2879, 3328, 5142
MspI CCGG 5 cut(s) 129, 662, 738, 2398, 3833
MunI CAATTG 1 cut(s) 3567
Mva1269I GAATGC 1 cut(s) 2353
MvaI CCWGG 8 cut(s) 1771, 2249, 2430, 2514, 2824, 3294, 4914, 4958
MvnI CGCG 1 cut(s) 36
NciI CCSGG 2 cut(s) 662, 663
NcoI CCATGG 2 cut(s) 2121, 4197
NdeI CATATG 2 cut(s) 2802, 3481
NheI GCTAGC 2 cut(s) 1567, 4972
NlaIV GGNNCC 8 cut(s) 501, 736, 2076, 2119, 3088, 3182, 3476, 3550
NmeAIII GCCGAG 1 cut(s) 431
NmuCI GTSAC 5 cut(s) 1357, 1491, 3167, 4738, 5302
NsbI TGCGCA 1 cut(s) 5406
NsiI ATGCAT 3 cut(s) 459, 4760, 5451
NspI RCATGY 6 cut(s) 2057, 3856, 4108, 4854, 5215, 5521
NspV TTCGAA 1 cut(s) 281
PaeI GCATGC 1 cut(s) 3856
PagI TCATGA 6 cut(s) 193, 2203, 2376, 2581, 2784, 4203
PaqCI CACCTGC 1 cut(s) 3872
PasI CCCWGGG 1 cut(s) 2248
PceI AGGCCT 2 cut(s) 1940, 4221
PciI ACATGT 2 cut(s) 4850, 5517
PciSI GCTCTTC 2 cut(s) 2823, 4655
PcsI WCGNNNNNNNCGW 5 cut(s) 273, 551, 560, 2391, 4496
PctI GAATGC 1 cut(s) 2353
PdmI GAANNNNTTC 3 cut(s) 2650, 2817, 4026
PflFI GACNNNGTC 1 cut(s) 4604
PinAI ACCGGT 1 cut(s) 3832
Ppu21I YACGTR 2 cut(s) 3004, 3689
PpuMI RGGWCCY 2 cut(s) 3643, 3968
PscI ACATGT 2 cut(s) 4850, 5517
PsiI TTATAA 1 cut(s) 2541
Psp124BI GAGCTC 3 cut(s) 2189, 3155, 4667
Psp1406I AACGTT 2 cut(s) 2157, 3309
Psp5II RGGWCCY 2 cut(s) 3643, 3968
Psp6I CCWGG 8 cut(s) 1769, 2247, 2428, 2512, 2822, 3292, 4912, 4956
PspFI CCCAGC 3 cut(s) 2851, 3425, 3887
PspGI CCWGG 8 cut(s) 1769, 2247, 2428, 2512, 2822, 3292, 4912, 4956
PspN4I GGNNCC 8 cut(s) 501, 736, 2076, 2119, 3088, 3182, 3476, 3550
PspPI GGNCC 5 cut(s) 1192, 1352, 2245, 3643, 3968
PspPPI RGGWCCY 2 cut(s) 3643, 3968
PsrI GAACNNNNNNTAC 2 cut(s) 741, 773
PstI CTGCAG 1 cut(s) 2485
PstNI CAGNNNCTG 1 cut(s) 3887
PsuI RGATCY 5 cut(s) 690, 2074, 3121, 3474, 4953
PsyI GACNNNGTC 1 cut(s) 4604
PvuII CAGCTG 3 cut(s) 2879, 3328, 5142
RsaI GTAC 5 cut(s) 39, 792, 819, 2308, 2799
RsaNI GTAC 5 cut(s) 38, 791, 818, 2307, 2798
RseI CAYNNNNRTG 7 cut(s) 1272, 1481, 1865, 2001, 2527, 2943, 4202
SacI GAGCTC 3 cut(s) 2189, 3155, 4667
SapI GCTCTTC 2 cut(s) 2823, 4655
Sau96I GGNCC 5 cut(s) 1192, 1352, 2245, 3643, 3968
SbfI CCTGCAGG 1 cut(s) 2485
SdaI CCTGCAGG 1 cut(s) 2485
SduI GDGCHC 8 cut(s) 1235, 1975, 2189, 2391, 2860, 3155, 3925, 4667
SexAI ACCWGGT 1 cut(s) 2512
SfcI CTRYAG 4 cut(s) 1743, 2481, 3175, 4892
SfuI TTCGAA 1 cut(s) 281
SinI GGWCC 4 cut(s) 1192, 1352, 3643, 3968
SmaI CCCGGG 1 cut(s) 663
SmiMI CAYNNNNRTG 7 cut(s) 1272, 1481, 1865, 2001, 2527, 2943, 4202
SmlI CTYRAG 4 cut(s) 2641, 3047, 4215, 5486
SmoI CTYRAG 4 cut(s) 2641, 3047, 4215, 5486
SnaBI TACGTA 1 cut(s) 3689
SphI GCATGC 1 cut(s) 3856
Sse8387I CCTGCAGG 1 cut(s) 2485
SseBI AGGCCT 2 cut(s) 1940, 4221
SspI AATATT 5 cut(s) 2650, 2893, 4026, 4264, 4569
SstI GAGCTC 3 cut(s) 2189, 3155, 4667
StuI AGGCCT 2 cut(s) 1940, 4221
StyI CCWWGG 8 cut(s) 883, 912, 1975, 2121, 3733, 4047, 4197, 4936
TatI WGTACW 2 cut(s) 817, 2306
TauI GCSGC 4 cut(s) 1046, 2522, 2698, 5081
TseFI GTSAC 5 cut(s) 1357, 1491, 3167, 4738, 5302
Tsp45I GTSAC 5 cut(s) 1357, 1491, 3167, 4738, 5302
TspGWI ACGGA 8 cut(s) 64, 178, 355, 372, 386, 437, 1921, 3243
TspMI CCCGGG 1 cut(s) 661
Tth111I GACNNNGTC 1 cut(s) 4604
VneI GTGCAC 1 cut(s) 2856
VpaK11BI GGWCC 4 cut(s) 1192, 1352, 3643, 3968
XagI CCTNNNNNAGG 1 cut(s) 1908
XceI RCATGY 6 cut(s) 2057, 3856, 4108, 4854, 5215, 5521
XcmI CCANNNNNNNNNTGG 2 cut(s) 2245, 4323
XmaI CCCGGG 1 cut(s) 661
XmiI GTMKAC 1 cut(s) 1917
XmnI GAANNNNTTC 3 cut(s) 2650, 2817, 4026
Zsp2I ATGCAT 3 cut(s) 459, 4760, 5451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.