Rh2CG620000

Encoded by

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
79484288 .. 79496339
12052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG620000.1

Sequence Viewer

Length: 5382 bp
ATGGACTCCTACACTCCCCTACTGGAGAAAACCCGGGTTCCCCAACCTTCCCTCCAAAAATACGCCGTGATTTCAATCTTCTCGAAGCTCCGATCCGCCCCGAACTACCTAGACTCCGACTCCGAACCCGGAAGAGACGCCATTTCCCAGTGCCTCCACTCCACTTCCCCCGCCGTCGTCGATCAATCGGTTCGCGAGCTCTGCGGCATCGTCGCCAACGACGGCTCCAAAATTGATGTCCACCGCGGCTTGCTGGAGCTCCAGTCCGCGCTCGAAGGATCCGATTCGAAGTTCGTCGACCTGTTTGTGAAAGGTTTGGGGTTTTTGGTCCGGTTAGGGTTTCAGAAGAGCAATGGCAAGTGGTCTTTCAGCAACACAGAGTCTCACCCCTTGATTAAGGTTCTTTCGTGCCGGAGCGATGTGGAGGCTGAACTTGTGCAGCAAATTTTACTGTTTATGGCACAGAATAGGCGGTTGGGAATGGTGGAAGTATGTGAGTTCTTGAGACCGTTTATAAACTATTCGATTTTGAGAATACCGTTTTCGGAAATGTCATTTATGTTTGCGAGGCGTTTAGTATCATCAATGGCGTCTCTTTGTTGCTCAATTCCTGTTGATGCAATGCCGGTGCTTAAATTGTTGACAGAATGTCTTCAGTATGTTCCGCACAAGAGTTCAGAAGATTTCCGGAATTTCATATATTTAGCGGAATGTATGGTGGATGCATATACAGTGGTTTTGAGGCATTTAGCTGGAACTAGATTGCTGATTGCTGAGGCTCAACTCTGTGGTTTGGAACTGTTTGAGAAAATTATATCGATTTGCACAACTGGTCATAAGCACTCCGGTTCAATTGAGCCTCTAGTTGAACTGTCCAAGAACTTATTGTTGTCCCAGAAAGATAATGGGTTCCCTTATGCACCTAAGTTATCATCAGCTATGCTTTCGTTATTTATTGTCCTTGTCCAATCAGAGCTCGAGCATGAACAACTTTCCACGTTGAAACTTCTGCACCTTCTCTTGAAGTGGAAGTATGGAAATGAAAATGGTGTAGACAGAAGTGGAGGTGCTATGAGCGAGGAGCTTTTGTTCATATTTCCTGTCGTTGGTCTACTGTCATCTCCTTCTAAACATGTCAAAGGAGCGGCAACAGATCTGCTTGTCATGCTAGAAAGACTTTTAGTAAGAGTTTTGGTAGCACCAAAGGATAAACCAGCAAAAGAAGCAGGGCATCCTTCTCTAAGCACACCTGGATCTATTGTGTTTAGAATCTTACAGCATCTTTGGTTTCAGGATTCTTCTTCATTGTCCAGTTTGTTTTTAAATTTTTCTTCTATCGGTAAAACTAATGGCGAGGAGATTTATGATGTACCAAAATCGTGGGCTTCTCATTTACAAGAGTATACTCTATCGATTGTTGACAAACGAAAGTCCTCCCTACCTCTCTCACAGACTCAAGAAATATACATAACTGAGATGCCCTCGTTACTCTCTGCCATTGCTGGTCTTTTAGTGATGAATGAGGTACAGGGAGGCACTGCTCTAGATTCTTTGGCTGCTATTGCCACGATGGATCCTAAACTGGGAGCTCAAATGTTGCTGGCTATCCTATTTTACAATAACATGTTCACTAGAAAAGATATAAGTCGCTTTACCATGTTGCCAAAACTTTTGACAATGCTTCCAGCACTTGCCTCACAGTCTGTGATGATTCCTCTTGTAGTTCAGACTATCTTACCAATGCTTCATAAGGATGTGAAACCAACTTTACATGCGACAGCCATTCGCTTGCTTTGTCAGACCTGGGAGACCAATGACCGTGCCTTCGGGAGTTTGCAGGGAGTGTTGGTTCCAAAAAGGTTCACTGACTTAAAGGCTGAGAGAAATATATGCATCAGTATGGCTGCATCAGTTCGGGATGTTTGCAGAAAAAATCCTGATAGGGGAGTGGACCTCATCTTATCTGTCTCGGCTTGCATTGAGAACAATGATCCGATTATTCAAGCTGTTGGTTTTCAAAGTCTTGCCCACCTTTGTGAAGCTGACGTAATTGATTTTTACACAGCCTGGGATGTCATCAGGAAGCATGTTCTGAATTACACTGTAGACCCAAATCTTGCTCAGAGCCTTTGCCTTCTTCTGAGGTGGGGTGCAATGGACGCTGAAGCACATCCTGAAGCCTCAAAAAACATCTTGCAGATCTTATGGAGTGTTAGCATCTCTACTCATCCTGGTCTGGAGACACAGTGGGCAAAGGCAAGGGCCTCTTCCTTTAAGGCCTTGGCTCAATTTGAGGTATCACATATTGAACAAAAAATTCAAGATTTCAAGAAAAGGAACCTGGAGTTGCTTTCTTGTGAAGCAAACATTACTGTACTGAATGCCATGGAAGAACTTCTGGTCAAGATAATAACATATGAGCACCTCACAAGGCGGAGATTGGTTAAGGAGAAAAGAGTTGCAGGAAGTAAGATCGAGAAGCTGCTGGATGTGTTTCCCCAGGTGATCTTTTCTTCAGGGAAACGAAGTGATGCCAGGGAGTTACCTGGTGCAGCCTTGCTGTGTCTTTCCTTTACTCCTAAAGATGTGAACACCCAAGGGCTATCAAGGGGATTCCGGGATATTCATGGTGGATATGAGAATGCTCTGGTGGAACTAGCTTCATCCCTTCAGCTCTCAAGAAATATTTTTGTTGCCCTTATTTCACTGGAATCATGGAAATCCTTCATGCGGCGTTGGCTGAGGGCTGATATCTTGTCCTTTGATGCTAAAGTGTCATCTATCGTCTTGGATAAAACCACTAAAGCTGCTAGTGACATTCTAAAGAGTATGATAAAAACAGCAGAAGAGGCTCTTCCTAGATCTGCTGAAAACATTGCACTAGCTGTTGGTGCCCTTTGTGCGGTGATGTGTAATAGCAAAAGCACCCTTGTGAAAGGAGCCTGTGGGGTTGGCTTGGGGTTTTCTTGCCAAGATCTTCTTACCAGGGTTGATGCCGCTGATTATTCTAGCACGGAGAAAGACTCAGACAATATGTCAGAAAGGGACTTGCTTGGTGTCATAGTTAAGGCGTTATTACGTATGATAAGTGATATCACTCAAGTGGCTCCTGATATTTTGGAAAGTCTCTCTGCTTATTTCCCACCTAGCAGAGATGATATAGATACAAATATAACTGCCGAGTTGTCAAATGAGAACTGTGATAACTCTGTAGAAGATATCTGGGGTATTGCTGGACTTGTTCTTGGTTTGGCGAGTTCTGTTGGTGCAATGTACAGAGCTGGGGCGCATGATGCTATTTTCAAGATAAAAGATGTAATGGTATCATGGGTTCCACATATTAATAGACTGGTTCAAGGTTCTGGTTCTTACTCTGGGGGTTCTGAGATAGTTTTGTCAGTAGGATCTTGTCTTGCAATTCCCATTTTAGTAGCATTCTGCCAAAGAGTAGAATTGATGGATGAGATTGAAGTCAACCATTTAGTAAATGGTTACAGGGAGCTCATTTCTGAATTACTGTCTGTCAAAAAATCTGGCACTTTCTATCACAGCTTATTGATGGCATCATGCATAGGGGCAGGCAGTCTTCTAGCCTGCATACTGAATGAAGGGGTGCATGCTATTGAAGTTGAGCGTGTAAAGGATCTACTAGAATTGTTCAAAAAATGCTATTCTAGTCCTTACCCTCCCTTAGTCCATTTCGGAGGGATGCTTGGAGTTGTTAACGCTATGGGAGCAGGTGCTGGGATCCTGCTTGACAGGCCTCCGCTAACCTCAGTGCAGGCACCTTTTGAACAGAAGGAATCTGGCTATGTCATGGGTCCTCTACTCTCAAATCCTGCTTGTGAGCGGCATTTGACATCATTGATGCAGGATATATTTCTTGTTGCACAGAAATCTGATGATCATCAATTGCAACAGTATGCTGCATGGGCGGCTTCATTTCTTCGAAATCATTTGTTGTCCAAGGATGCTGTCAATGTTGACAATAGTCTTAATACTGATTCAGGTGGTTCAAAATCTGTTTCCCAAAGTTTTGCAGATGACAGTTTAGTTATGAAGCTTTCTTCATGGCTAATGCATCTCAACTTTACTAGGACAGGTAATATCGCTCATGTTGGCACAGTAATAACTGTAGTAAGGTGTCTTTCACAAGCTCCTAGATTGCCAACGTTGGACTGGGGATCAATCATTAGACGTGGCATGAGATATGAGGCACAGGTTGCGGAGATGTTACCAACAGAATCATCATTCCAAAAAGGAATTCTTAGGGAGGAGTGTCTAAAGTTCTCATTAGCTCATGCAAATAAATTTGACCAACTCCTAAGTTTCATAGATGAGCTATCTGACTTGTCCAGATTCAGTACACTAGAGTGGAATCTGCAATCTTGTGTTCTCAACCATCTTGCCGACCTCATAAAAGTATTCTCCAGTTCCAGGCTTGAAAAGTTATTTGATGATCTCTGCAACTACTATACTTCACGTCAATCATATGACACTGATGAGACAAGTTTGTTACGGATTTCATGCTGGAAGGGTCTCTACAAGTGTTTAGACGAGGCTTCTCTTGATTCTCTCGAGTACATATCCGACATAGAAAAATGCATGGAGGTGCTGTTTTCCTTGTTACCTGCAAGGCAATTGGCTGCTGTGGTAGGAGTAGGTCGGTTGAATTCTATAAAGGAGTGGTCTGAGGCAGTTAAATGCTTAGGAAAGGCTCGGAAAAGTTGGTTGGCGGATTTCCTACAGGTTTCACAGGAGGGCCTGCAACAAAGAGATGGCCAGCGTCTAGAAGTCCTGAAAAAAATTCAAGCCAAATCTAAGCTAGTTAGAATTGGTTCCATCCCTTTGACTGAGCTGGGAAGACTAAAAGCTCTGATATTGAATATTGAATCCGATGGCATATGGGACGTGCTTGTAGAAGTTGTAGCAGCTTTGCAACATGCAGAGGGAAGTATCAAAAGACAGTGGCTCATTGATGCGGCTGAAATTAGCTGTGTATCAAGTTATCCGTCCACGGCGTTGAAGTTTCTTGGATTGCTTTCTGGTAGCTGGAGCAAATATATGCCCCTTCTGATTTTGGACCAACAAACTCTGCTGAGTGATTTACCAGTCACCCTTTCTTCGCTTCTCTCAAACTCTAGTTGGGGAGGAGTCGTGGAATCTGTCGTTTCCTCTCTTTTTGCATCAATGGAGCGCATTTACAATTGGACCACACACGAGGCACGGGTTAAGGATATGCTGCCCGGCATGCAACCTATTGATGAAAGTGAAAATCCCATGGCTGGTTTCCTATTGCACGTGATGCATTCTACCTGTGTAACGTTGAAGGATTACTTGTCTCTTGAGAAGCAGCTTAAGCTTGCCAATATGGACATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1793

Amino Acids

198.34

Weight (kDa)

6.09

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3730 PF12530 84 - 362 6.4e-43 Focadhesin/RST1, DUF3730
DUF3730 PF12530 552 - 761 7.5e-63 Focadhesin/RST1, DUF3730
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 515
AarI CACCTGC 1 cut(s) 3728
Acc36I ACCTGC 2 cut(s) 3728, 4639
AccB1I GGYRCC 2 cut(s) 2891, 3784
AccBSI CCGCTC 2 cut(s) 1145, 3850
AccI GTMKAC 5 cut(s) 297, 1053, 1111, 1403, 2106
AccII CGCG 3 cut(s) 195, 246, 269
AccIII TCCGGA 1 cut(s) 687
AclI AACGTT 2 cut(s) 4172, 5324
AcoI YGGCCR 1 cut(s) 4780
AcsI RAATTY 8 cut(s) 444, 691, 1324, 2316, 4263, 4310, 4672, 4806
AcuI CTGAAG 5 cut(s) 638, 2184, 2196, 2499, 2654
AcvI CACGTG 1 cut(s) 5302
AcyI GRCGYC 2 cut(s) 138, 590
AfaI GTAC 6 cut(s) 1371, 1527, 2376, 3275, 4366, 4583
AfiI CCNNNNNNNGG 7 cut(s) 1106, 1583, 1943, 2730, 2902, 4437, 5285
AflII CTTAAG 1 cut(s) 5357
AflIII ACRYGT 2 cut(s) 1132, 1623
AhdI GACNNNNNGTC 2 cut(s) 648, 3034
AjiI CACGTC 3 cut(s) 4199, 4484, 4912
AjuI GAANNNNNNNTTGG 6 cut(s) 458, 490, 4248, 4280, 4715, 4747
AleI CACNNNNGTG 4 cut(s) 2034, 2930, 3101, 4372
AloI GAACNNNNNNTCC 4 cut(s) 1073, 1105, 1833, 1865
Alw21I GWGCWC 6 cut(s) 201, 261, 978, 1591, 2424, 3504
AlwNI CAGNNNCTG 1 cut(s) 3743
Ama87I CYCGRG 3 cut(s) 33, 977, 4577
Aor13HI TCCGGA 1 cut(s) 687
AoxI GGCC 5 cut(s) 2262, 2277, 3761, 4762, 4780
ApoI RAATTY 8 cut(s) 444, 691, 1324, 2316, 4263, 4310, 4672, 4806
ArsI GACNNNNNNTTYG 4 cut(s) 222, 254, 1808, 1840
AseI ATTAAT 1 cut(s) 3342
Asp700I GAANNNNTTC 4 cut(s) 651, 2394, 2723, 4837
AspLEI GCGC 3 cut(s) 271, 3289, 5199
AspS9I GGNCC 7 cut(s) 328, 1951, 2262, 3821, 4762, 5083, 5211
AsuC2I CCSGG 5 cut(s) 34, 35, 129, 2618, 5247
AsuHPI GGTGA 4 cut(s) 377, 2515, 2917, 5107
AsuII TTCGAA 2 cut(s) 287, 3949
AvaI CYCGRG 3 cut(s) 33, 977, 4577
AvaII GGWCC 5 cut(s) 328, 1951, 3821, 5083, 5211
BaeGI GKGCMC 1 cut(s) 2896
BalI TGGCCA 1 cut(s) 4782
BamHI GGATCC 3 cut(s) 278, 1573, 3747
BanI GGYRCC 2 cut(s) 2891, 3784
BanII GRGCYC 5 cut(s) 201, 261, 978, 1591, 3504
BarI GAAGNNNNNNTAC 2 cut(s) 4526, 4558
BauI CACGAG 1 cut(s) 5219
BbrPI CACGTG 1 cut(s) 5302
BbsI GAAGAC 3 cut(s) 644, 3578, 4870
Bbv12I GWGCWC 6 cut(s) 201, 261, 978, 1591, 2424, 3504
BbvCI CCTCAGC 2 cut(s) 774, 2741
BccI CCATC 7 cut(s) 1564, 3451, 3553, 4410, 4772, 4850, 4892
BceAI ACGGC 4 cut(s) 50, 158, 238, 5034
BclI TGATCA 1 cut(s) 3904
BcnI CCSGG 5 cut(s) 34, 35, 129, 2618, 5247
BfmI CTRYAG 4 cut(s) 2103, 3210, 4134, 4745
BfrI CTTAAG 1 cut(s) 5357
BfuAI ACCTGC 2 cut(s) 3728, 4639
BglII AGATCT 4 cut(s) 1153, 2199, 2861, 2974
Bme18I GGWCC 5 cut(s) 328, 1951, 3821, 5083, 5211
BmeRI GACNNNNNGTC 2 cut(s) 648, 3034
BmeT110I CYCGRG 3 cut(s) 33, 977, 4577
BmgBI CACGTC 3 cut(s) 4199, 4484, 4912
BmgT120I GGNCC 7 cut(s) 328, 1951, 2262, 3821, 4762, 5083, 5211
BmrI ACTGGG 3 cut(s) 142, 1592, 4189
BmuI ACTGGG 3 cut(s) 142, 1592, 4189
BoxI GACNNNNGTC 1 cut(s) 3990
BpiI GAAGAC 3 cut(s) 644, 3578, 4870
BplI GAGNNNNNCTC 6 cut(s) 1466, 1498, 1938, 1970, 3008, 3040
BpmI CTGGAG 7 cut(s) 44, 245, 275, 2258, 2363, 4414, 5074
Bpu10I CCTNAGC 3 cut(s) 774, 2741, 4708
Bpu14I TTCGAA 2 cut(s) 287, 3949
BpuEI CTTGAG 5 cut(s) 523, 1440, 2662, 3084, 5366
BpuMI CCSGG 5 cut(s) 34, 35, 129, 2618, 5247
Bsa29I ATCGAT 2 cut(s) 818, 1412
BsaAI YACGTR 2 cut(s) 3080, 5302
BsaBI GATNNNNATC 2 cut(s) 74, 3906
BsaHI GRCGYC 2 cut(s) 138, 590
BsaI GGTCTC 3 cut(s) 499, 1802, 4544
BsaWI WCCGGW 3 cut(s) 330, 687, 845
Bsc4I CCNNNNNNNGG 7 cut(s) 1106, 1583, 1943, 2730, 2902, 4437, 5285
Bse118I RCCGGY 1 cut(s) 625
Bse3DI GCAATG 6 cut(s) 358, 627, 1497, 2160, 2874, 3276
Bse8I GATNNNNATC 2 cut(s) 74, 3906
BseAI TCCGGA 1 cut(s) 687
BseCI ATCGAT 2 cut(s) 818, 1412
BseJI GATNNNNATC 2 cut(s) 74, 3906
BseLI CCNNNNNNNGG 7 cut(s) 1106, 1583, 1943, 2730, 2902, 4437, 5285
BseMI GCAATG 6 cut(s) 358, 627, 1497, 2160, 2874, 3276
BseRI GAGGAG 4 cut(s) 1094, 1370, 4289, 5166
BseSI GKGCMC 1 cut(s) 2896
BseYI CCCAGC 3 cut(s) 3281, 3743, 4858
BsgI GTGCAG 4 cut(s) 458, 995, 2571, 3800
Bsh1236I CGCG 3 cut(s) 195, 246, 269
BshFI GGCC 5 cut(s) 2264, 2279, 3763, 4764, 4782
BshNI GGYRCC 2 cut(s) 2891, 3784
BshVI ATCGAT 2 cut(s) 818, 1412
BsiHKAI GWGCWC 6 cut(s) 201, 261, 978, 1591, 2424, 3504
BsiHKCI CYCGRG 3 cut(s) 33, 977, 4577
BsiSI CCGG 9 cut(s) 34, 129, 331, 412, 626, 688, 846, 2617, 5247
BslFI GGGAC 3 cut(s) 877, 3059, 4922
BslI CCNNNNNNNGG 7 cut(s) 1106, 1583, 1943, 2730, 2902, 4437, 5285
BsmBI CGTCTC 2 cut(s) 129, 597
BsmFI GGGAC 3 cut(s) 877, 3059, 4922
BsmI GAATGC 4 cut(s) 2386, 2647, 3434, 5308
BsnI GGCC 5 cut(s) 2264, 2279, 3763, 4764, 4782
Bso31I GGTCTC 3 cut(s) 499, 1802, 4544
BsoBI CYCGRG 3 cut(s) 33, 977, 4577
Bsp119I TTCGAA 2 cut(s) 287, 3949
Bsp1286I GDGCHC 7 cut(s) 201, 261, 978, 1591, 2424, 2896, 3504
Bsp13I TCCGGA 1 cut(s) 687
Bsp1407I TGTACA 1 cut(s) 3273
Bsp19I CCATGG 2 cut(s) 2385, 5280
Bsp68I TCGCGA 1 cut(s) 195
BspANI GGCC 5 cut(s) 2264, 2279, 3763, 4764, 4782
BspDI ATCGAT 2 cut(s) 818, 1412
BspEI TCCGGA 1 cut(s) 687
BspFNI CGCG 3 cut(s) 195, 246, 269
BspMI ACCTGC 2 cut(s) 3728, 4639
BspQI GCTCTTC 2 cut(s) 341, 2859
BspT104I TTCGAA 2 cut(s) 287, 3949
BspT107I GGYRCC 2 cut(s) 2891, 3784
BspTI CTTAAG 1 cut(s) 5357
BspTNI GGTCTC 3 cut(s) 499, 1802, 4544
BsrBI CCGCTC 2 cut(s) 1145, 3850
BsrDI GCAATG 6 cut(s) 358, 627, 1497, 2160, 2874, 3276
BsrFI RCCGGY 1 cut(s) 625
BsrGI TGTACA 1 cut(s) 3273
BssAI RCCGGY 1 cut(s) 625
BssNAI GTATAC 1 cut(s) 1404
BssNI GRCGYC 2 cut(s) 138, 590
BssSI CACGAG 1 cut(s) 5219
BssT1I CCWWGG 5 cut(s) 2280, 2385, 2596, 3966, 5280
Bst1107I GTATAC 1 cut(s) 1404
Bst2BI CACGAG 1 cut(s) 5219
Bst6I CTCTTC 5 cut(s) 127, 341, 2272, 2841, 2859
BstACI GRCGYC 2 cut(s) 138, 590
BstAFI CTTAAG 1 cut(s) 5357
BstAPI GCANNNNNTGC 2 cut(s) 4223, 5305
BstAUI TGTACA 1 cut(s) 3273
BstBAI YACGTR 2 cut(s) 3080, 5302
BstBI TTCGAA 2 cut(s) 287, 3949
BstDSI CCRYGG 4 cut(s) 244, 2385, 5016, 5280
BstFNI CGCG 3 cut(s) 195, 246, 269
BstHHI GCGC 3 cut(s) 271, 3289, 5199
BstNSI RCATGY 7 cut(s) 1136, 1627, 1775, 2090, 3620, 4946, 5254
BstPAI GACNNNNGTC 1 cut(s) 3990
BstSFI CTRYAG 4 cut(s) 2103, 3210, 4134, 4745
BstSLI GKGCMC 1 cut(s) 2896
BstSNI TACGTA 1 cut(s) 3080
BstUI CGCG 3 cut(s) 195, 246, 269
BstV2I GAAGAC 3 cut(s) 644, 3578, 4870
BstXI CCANNNNNNTGG 1 cut(s) 1380
BstZ17I GTATAC 1 cut(s) 1404
Bsu15I ATCGAT 2 cut(s) 818, 1412
BsuRI GGCC 5 cut(s) 2264, 2279, 3763, 4764, 4782
BsuTUI ATCGAT 2 cut(s) 818, 1412
BtgI CCRYGG 4 cut(s) 244, 2385, 5016, 5280
BtgZI GCGATG 1 cut(s) 432
BtrI CACGTC 3 cut(s) 4199, 4484, 4912
BtsI GCAGTG 1 cut(s) 1536
BtuMI TCGCGA 1 cut(s) 195
BveI ACCTGC 2 cut(s) 3728, 4639
CaiI CAGNNNCTG 1 cut(s) 3743
CfoI GCGC 3 cut(s) 271, 3289, 5199
Cfr10I RCCGGY 1 cut(s) 625
Cfr13I GGNCC 7 cut(s) 328, 1951, 2262, 3821, 4762, 5083, 5211
Cfr42I CCGCGG 1 cut(s) 247
Cfr9I CCCGGG 1 cut(s) 33
ClaI ATCGAT 2 cut(s) 818, 1412
CseI GACGC 4 cut(s) 146, 579, 2168, 4775
CsiI ACCWGGT 1 cut(s) 2545
Csp6I GTAC 6 cut(s) 1370, 1526, 2375, 3274, 4365, 4582
CviQI GTAC 6 cut(s) 1370, 1526, 2375, 3274, 4365, 4582
DraI TTTAAA 1 cut(s) 1323
DriI GACNNNNNGTC 2 cut(s) 648, 3034
EaeI YGGCCR 1 cut(s) 4780
Eam1104I CTCTTC 5 cut(s) 127, 341, 2272, 2841, 2859
Eam1105I GACNNNNNGTC 2 cut(s) 648, 3034
EarI CTCTTC 5 cut(s) 127, 341, 2272, 2841, 2859
EciI GGCGGA 3 cut(s) 85, 2449, 4751
Ecl136II GAGCTC 5 cut(s) 199, 259, 976, 1589, 3502
Eco105I TACGTA 1 cut(s) 3080
Eco130I CCWWGG 5 cut(s) 2280, 2385, 2596, 3966, 5280
Eco147I AGGCCT 2 cut(s) 2279, 3763
Eco24I GRGCYC 5 cut(s) 201, 261, 978, 1591, 3504
Eco31I GGTCTC 3 cut(s) 499, 1802, 4544
Eco32I GATATC 3 cut(s) 2752, 3094, 3220
Eco47I GGWCC 5 cut(s) 328, 1951, 3821, 5083, 5211
Eco53kI GAGCTC 5 cut(s) 199, 259, 976, 1589, 3502
Eco57I CTGAAG 5 cut(s) 638, 2184, 2196, 2499, 2654
Eco72I CACGTG 1 cut(s) 5302
Eco88I CYCGRG 3 cut(s) 33, 977, 4577
EcoICRI GAGCTC 5 cut(s) 199, 259, 976, 1589, 3502
EcoO109I RGGNCCY 3 cut(s) 2262, 3821, 4762
EcoRI GAATTC 2 cut(s) 4263, 4672
EcoRV GATATC 3 cut(s) 2752, 3094, 3220
EcoT14I CCWWGG 5 cut(s) 2280, 2385, 2596, 3966, 5280
EcoT22I ATGCAT 6 cut(s) 727, 1895, 3572, 4083, 4607, 5310
EcoT38I GRGCYC 5 cut(s) 201, 261, 978, 1591, 3504
ErhI CCWWGG 5 cut(s) 2280, 2385, 2596, 3966, 5280
Esp3I CGTCTC 2 cut(s) 129, 597
FaqI GGGAC 3 cut(s) 877, 3059, 4922
FauI CCCGC 1 cut(s) 178
FauNDI CATATG 3 cut(s) 2416, 4492, 4904
FbaI TGATCA 1 cut(s) 3904
FblI GTMKAC 5 cut(s) 297, 1053, 1111, 1403, 2106
FriOI GRGCYC 5 cut(s) 201, 261, 978, 1591, 3504
GlaI GCGC 3 cut(s) 270, 3288, 5198
GsaI CCCAGC 3 cut(s) 3285, 3747, 4862
GsuI CTGGAG 7 cut(s) 44, 245, 275, 2258, 2363, 4414, 5074
HaeIII GGCC 5 cut(s) 2264, 2279, 3763, 4764, 4782
HapII CCGG 9 cut(s) 34, 129, 331, 412, 626, 688, 846, 2617, 5247
HgaI GACGC 4 cut(s) 146, 579, 2168, 4775
HhaI GCGC 3 cut(s) 271, 3289, 5199
Hin1I GRCGYC 2 cut(s) 138, 590
Hin6I GCGC 3 cut(s) 269, 3287, 5197
HinP1I GCGC 3 cut(s) 269, 3287, 5197
HincII GTYRAC 6 cut(s) 298, 642, 1420, 3475, 3724, 3985
HindII GTYRAC 6 cut(s) 298, 642, 1420, 3475, 3724, 3985
HindIII AAGCTT 2 cut(s) 4061, 5360
HpaI GTTAAC 1 cut(s) 3724
HpaII CCGG 9 cut(s) 34, 129, 331, 412, 626, 688, 846, 2617, 5247
HphI GGTGA 4 cut(s) 377, 2515, 2917, 5107
Hpy99I CGWCG 5 cut(s) 179, 182, 215, 224, 299
HpyCH4IV ACGT 9 cut(s) 998, 2046, 3079, 4172, 4198, 4483, 4911, 5301, 5324
HpySE526I ACGT 9 cut(s) 998, 2046, 3079, 4172, 4198, 4483, 4911, 5301, 5324
Hsp92I GRCGYC 2 cut(s) 138, 590
HspAI GCGC 3 cut(s) 269, 3287, 5197
Kpn2I TCCGGA 1 cut(s) 687
Ksp22I TGATCA 1 cut(s) 3904
KspAI GTTAAC 1 cut(s) 3724
KspI CCGCGG 1 cut(s) 247
LguI GCTCTTC 2 cut(s) 341, 2859
MabI ACCWGGT 1 cut(s) 2545
MaeII ACGT 9 cut(s) 998, 2046, 3079, 4172, 4198, 4483, 4911, 5301, 5324
MaeIII GTNAC 9 cut(s) 1485, 2541, 2813, 3491, 4233, 4515, 4626, 5113, 5320
MbiI CCGCTC 2 cut(s) 1145, 3850
MfeI CAATTG 4 cut(s) 852, 3911, 4640, 5206
MhlI GDGCHC 7 cut(s) 201, 261, 978, 1591, 2424, 2896, 3504
MlsI TGGCCA 1 cut(s) 4782
MluNI TGGCCA 1 cut(s) 4782
MlyI GAGTC 6 cut(s) 107, 113, 389, 1447, 3017, 5163
MmeI TCCRAC 3 cut(s) 141, 4155, 4614
Mox20I TGGCCA 1 cut(s) 4782
Mph1103I ATGCAT 6 cut(s) 727, 1895, 3572, 4083, 4607, 5310
MroI TCCGGA 1 cut(s) 687
MroXI GAANNNNTTC 4 cut(s) 651, 2394, 2723, 4837
MscI TGGCCA 1 cut(s) 4782
MslI CAYNNNNRTG 7 cut(s) 1752, 1898, 2034, 2930, 3101, 4372, 4610
Msp20I TGGCCA 1 cut(s) 4782
MspA1I CMGCKG 2 cut(s) 246, 2999
MspCI CTTAAG 1 cut(s) 5357
MspI CCGG 9 cut(s) 34, 129, 331, 412, 626, 688, 846, 2617, 5247
MunI CAATTG 4 cut(s) 852, 3911, 4640, 5206
Mva1269I GAATGC 4 cut(s) 2386, 2647, 3434, 5308
MvnI CGCG 3 cut(s) 195, 246, 269
NciI CCSGG 5 cut(s) 34, 35, 129, 2618, 5247
NcoI CCATGG 2 cut(s) 2385, 5280
NdeI CATATG 3 cut(s) 2416, 4492, 4904
NmeAIII GCCGAG 2 cut(s) 1949, 3205
NmuCI GTSAC 2 cut(s) 2813, 5113
NruI TCGCGA 1 cut(s) 195
NsiI ATGCAT 6 cut(s) 727, 1895, 3572, 4083, 4607, 5310
NspI RCATGY 7 cut(s) 1136, 1627, 1775, 2090, 3620, 4946, 5254
NspV TTCGAA 2 cut(s) 287, 3949
OliI CACNNNNGTG 4 cut(s) 2034, 2930, 3101, 4372
PaeI GCATGC 2 cut(s) 3620, 5254
PaeR7I CTCGAG 2 cut(s) 977, 4577
PaqCI CACCTGC 1 cut(s) 3728
PceI AGGCCT 2 cut(s) 2279, 3763
PciI ACATGT 2 cut(s) 1132, 1623
PciSI GCTCTTC 2 cut(s) 341, 2859
PcsI WCGNNNNNNNCGW 2 cut(s) 216, 279
PctI GAATGC 4 cut(s) 2386, 2647, 3434, 5308
PdmI GAANNNNTTC 4 cut(s) 651, 2394, 2723, 4837
PfoI TCCNGGA 1 cut(s) 2616
PleI GAGTC 6 cut(s) 107, 113, 388, 1447, 3017, 5162
PmaCI CACGTG 1 cut(s) 5302
PmlI CACGTG 1 cut(s) 5302
PpsI GAGTC 6 cut(s) 107, 113, 388, 1447, 3017, 5162
Ppu21I YACGTR 2 cut(s) 3080, 5302
PpuMI RGGWCCY 1 cut(s) 3821
PscI ACATGT 2 cut(s) 1132, 1623
PshAI GACNNNNGTC 1 cut(s) 3990
PshBI ATTAAT 1 cut(s) 3342
PsiI TTATAA 1 cut(s) 515
Psp124BI GAGCTC 5 cut(s) 201, 261, 978, 1591, 3504
Psp1406I AACGTT 2 cut(s) 4172, 5324
Psp5II RGGWCCY 1 cut(s) 3821
PspCI CACGTG 1 cut(s) 5302
PspFI CCCAGC 3 cut(s) 3281, 3743, 4858
PspPI GGNCC 7 cut(s) 328, 1951, 2262, 3821, 4762, 5083, 5211
PspPPI RGGWCCY 1 cut(s) 3821
PspXI VCTCGAGB 1 cut(s) 977
PsrI GAACNNNNNNTAC 2 cut(s) 3315, 3347
PstNI CAGNNNCTG 1 cut(s) 3743
RruI TCGCGA 1 cut(s) 195
RsaI GTAC 6 cut(s) 1371, 1527, 2376, 3275, 4366, 4583
RsaNI GTAC 6 cut(s) 1370, 1526, 2375, 3274, 4365, 4582
RseI CAYNNNNRTG 7 cut(s) 1752, 1898, 2034, 2930, 3101, 4372, 4610
SacI GAGCTC 5 cut(s) 201, 261, 978, 1591, 3504
SacII CCGCGG 1 cut(s) 247
SalI GTCGAC 1 cut(s) 296
SapI GCTCTTC 2 cut(s) 341, 2859
Sau96I GGNCC 7 cut(s) 328, 1951, 2262, 3821, 4762, 5083, 5211
SchI GAGTC 6 cut(s) 107, 113, 389, 1447, 3017, 5163
SduI GDGCHC 7 cut(s) 201, 261, 978, 1591, 2424, 2896, 3504
SexAI ACCWGGT 1 cut(s) 2545
SfcI CTRYAG 4 cut(s) 2103, 3210, 4134, 4745
Sfr274I CTCGAG 2 cut(s) 977, 4577
Sfr303I CCGCGG 1 cut(s) 247
SfuI TTCGAA 2 cut(s) 287, 3949
SgrBI CCGCGG 1 cut(s) 247
SinI GGWCC 5 cut(s) 328, 1951, 3821, 5083, 5211
SlaI CTCGAG 2 cut(s) 977, 4577
SmaI CCCGGG 1 cut(s) 35
SmiMI CAYNNNNRTG 7 cut(s) 1752, 1898, 2034, 2930, 3101, 4372, 4610
SmlI CTYRAG 8 cut(s) 502, 977, 1455, 2677, 3099, 4577, 5345, 5357
SmoI CTYRAG 8 cut(s) 502, 977, 1455, 2677, 3099, 4577, 5345, 5357
SnaBI TACGTA 1 cut(s) 3080
SphI GCATGC 2 cut(s) 3620, 5254
SseBI AGGCCT 2 cut(s) 2279, 3763
SspI AATATT 2 cut(s) 2686, 4888
SstI GAGCTC 5 cut(s) 201, 261, 978, 1591, 3504
StuI AGGCCT 2 cut(s) 2279, 3763
StyI CCWWGG 5 cut(s) 2280, 2385, 2596, 3966, 5280
TaiI ACGT 9 cut(s) 1001, 2049, 3082, 4175, 4201, 4486, 4914, 5304, 5327
TatI WGTACW 4 cut(s) 2374, 3273, 4364, 4581
TauI GCSGC 8 cut(s) 207, 249, 1148, 2734, 2999, 3853, 3938, 4985
TseFI GTSAC 2 cut(s) 2813, 5113
Tsp45I GTSAC 2 cut(s) 2813, 5113
TspGWI ACGGA 3 cut(s) 3029, 4534, 5001
TspMI CCCGGG 1 cut(s) 33
Vha464I CTTAAG 1 cut(s) 5357
VpaK11BI GGWCC 5 cut(s) 328, 1951, 3821, 5083, 5211
VspI ATTAAT 1 cut(s) 3342
XapI RAATTY 8 cut(s) 444, 691, 1324, 2316, 4263, 4310, 4672, 4806
XbaI TCTAGA 2 cut(s) 1543, 4789
XceI RCATGY 7 cut(s) 1136, 1627, 1775, 2090, 3620, 4946, 5254
XcmI CCANNNNNNNNNTGG 3 cut(s) 902, 3485, 4176
XhoI CTCGAG 2 cut(s) 977, 4577
XmaI CCCGGG 1 cut(s) 33
XmiI GTMKAC 5 cut(s) 297, 1053, 1111, 1403, 2106
XmnI GAANNNNTTC 4 cut(s) 651, 2394, 2723, 4837
Zsp2I ATGCAT 6 cut(s) 727, 1895, 3572, 4083, 4607, 5310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.