Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001894

Physical Location & Seq

Genomic Coordinates Forward (+)

89214142 .. 89217414

Gene Structure 3273 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG668100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGGATGAGATTGAAGTCAACCATTTAGTAAATGGTTACAGGGAGCTCATTTCTGAATTACTGTCTGTCAAAAAATCTGGCACTTTCTATCACAGCTTATTGATGGCATCATGCATAGGGGCAGGCAGTCTTCTAGCCTGCATACTGAATGAAGGGGTGCATGCTATTGAAGTTGAGCGTGTAAAGGATCTACTAGAATTGTTCAAAAAATGCTATTCTAGTCCTTACCCTCCCTTAGTCCATTTCGGAGGGATGCTTGGAGTTGTTAACGCTATGGGAGCAGGTGCTGGGATCCTGCTTGACAGGCCTCCGCTAACCTCAGTGCAGGCACCTTTTGAACAGAAGGAATCTGGCTATGTCATGGGTCCTCTACTCTCAAATCCTGCTTGTGAGCGGCATTTGACATCATTGATGCAGGATATATTTCTTGTTGCACAGAAATCTGATGATCATCAATTGCAACAGTATGCTGCATGGGCGGCTTCATTTCTTCGAAATCATTTGTTGTCCAAGGATGCTGTCAATGTTGACAATAGTCTTAATACTGATTCAGGTGGTTCAAAATCTGTTTCCCAAAGTTTTGCAGATGACAGTTTAGTTATGAAGCTTTCTTCATGGCTAATGCATCTCAACTTTACTAGGACAGGTAATATCGCTCATGTTGGCACAGTAATAACTGTAGTAAGGTGTCTTTCACAAGCTCCTAGATTGCCAACGTTGGACTGGGGATCAATCATTAGACGTGGCATGAGATATGAGGCACAGGTTGCGGAGATGTTACCAACAGAATCATCATTCCAAAAAGGAATTCTTAGGGAGGAGTGTCTAAAGTTCTCATTAGCTCATGCAAATAAATTTGACCAACTCCTAAGTTTCATAGATGAGCTATCTGACTTGTCCAGATTCAGTACACTAGAGTGGAATCTGCAATCTTGTGTTCTCAACCATCTTGCCGACCTCATAAAAGTATTCTCCAGTTCCAGGCTTGAAAAGTTATTTGATGATCTCTGCAACTACTATACTTCACGTCAATCATATGACACTGATGAGACAAGTTTGTTACGGATTTCATGCTGGAAGGGTCTCTACAAGTGTTTAGACGAGGCTTCTCTTGATTCTCTCGAGTACATATCCGACATAGAAAAATGCATGGAGGTGCTGTTTTCCTTGTTACCTGCAAGGCAATTGGCTGCTGTGGTAGGAGTAGGTCGGTTGAATTCTATAAAGGAGTGGTCTGAGGCAGTTAAATGCTTAGGAAAGGCTCGGAAAAGTTGGTTGGCGGATTTCCTACAGGTTTCACAGGAGGGCCTGCAACAAAGAGATGGCCAGCGTCTAGAAGTCCTGAAAAAAATTCAAGCCAAATCTAAGCTAGTTAGAATTGGTTCCATCCCTTTGACTGAGCTGGGAAGACTAAAAGCTCTGATATTGAATATTGAATCCGATGGCATATGGGACGTGCTTGTAGAAGTTGTAGCAGCTTTGCAACATGCAGAGGGAAGTATCAAAAGACAGTGGCTCATTGATGCGGCTGAAATTAGCTGTGTATCAAGTTATCCGTCCACGGCGTTGAAGTTTCTTGGATTGCTTTCTGGTAGCTGGAGCAAATATATGCCCCTTCTGATTTTGGACCAACAAACTCTGCTGAGTGATTTACCAGTCACCCTTTCTTCGCTTCTCTCAAACTCTAGTTGGGGAGGAGTCGTGGAATCTGTCGTTTCCTCTCTTTTTGCATCAATGGAGCGCATTTACAATTGGACCACACACGAGGCACGGGTTAAGGATATGCTGCCCGGCATGCAACCTATTGATGAAAGTGAAAATCCCATGGCTGGTTTCCTATTGCACGTGATGCATTCTACCTGTGTAACGTTGAAGGATTACTTGTCTCTTGAGAAGCAGCTTAAGCTTGCCAATATGGACATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3730

Protein Analysis

641

Amino Acids

71.32

Weight (kDa)

5.67

Isoelectric Point (pI)

44.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27670
fragaria_vesca	FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51542 FvH4_6g51551
malus_domestica	MD09G1028200.v1.1 MD17G1029800.v1.1
prunus_persica	Prupe.3G290300_v2.0.a1 Prupe.3G290500_v2.0.a1
pyrus_communis	pycom111g02210 pycom111g02220 pycom17g02680 pycom17g02700 pycom17g02710 pycom17g02720
rosa_chinensis	RchiOBHm_Chr2g0173001
rosa_laevigata	RLG00000022148
rosa_multiflora	Rmu_co8290889.1_g000001 Rmu_sc0012743.1_g000007 Rmu_sc0026490.1_g000001 Rmu_sc0032348.1_g000003
rosa_roxburghii	Rroxscaffold_2G00079360
rosa_rugosa	Rorug02G0248700 Rorug02G0366500 Rorug02G0564400 Rorug02G0564500 Rorug02G0564800 Rorug05G0265600.1
rosa_samantha	Rh2AG641000 Rh2AG641100 Rh2AG641600 Rh2AG643600 Rh2AG643800 Rh2BG654700 Rh2CG620000 Rh2DG668000 Rh2DG668100
rosa_wichuraiana	Rw2G052910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	272
Acc36I	ACCTGC	2 cut(s)	272, 1183
AccB1I	GGYRCC	1 cut(s)	328
AccBSI	CCGCTC	1 cut(s)	394
AciI	CCGC	6 cut(s)	311, 394, 479, 770, 1280, 1526
AclI	AACGTT	2 cut(s)	716, 1868
AclWI	GGATC	4 cut(s)	195, 286, 299, 736
AcoI	YGGCCR	1 cut(s)	1324
AcsI	RAATTY	4 cut(s)	807, 854, 1216, 1350
AcvI	CACGTG	1 cut(s)	1846
AfaI	GTAC	2 cut(s)	910, 1127
AfiI	CCNNNNNNNGG	2 cut(s)	981, 1829
AflII	CTTAAG	1 cut(s)	1901
AjiI	CACGTC	3 cut(s)	743, 1028, 1456
AjnI	CCWGG	1 cut(s)	980
AjuI	GAANNNNNNNTTGG	4 cut(s)	792, 824, 1259, 1291
AleI	CACNNNNGTG	1 cut(s)	916
Alw21I	GWGCWC	1 cut(s)	48
Alw26I	GTCTC	3 cut(s)	1043, 1088, 1890
AlwI	GGATC	4 cut(s)	195, 286, 299, 736
AlwNI	CAGNNNCTG	1 cut(s)	287
Ama87I	CYCGRG	1 cut(s)	1121
AoxI	GGCC	3 cut(s)	305, 1306, 1324
ApeKI	GCWGC	5 cut(s)	470, 1190, 1475, 1786, 1897
ApoI	RAATTY	4 cut(s)	807, 854, 1216, 1350
Asp700I	GAANNNNTTC	1 cut(s)	1381
AspLEI	GCGC	1 cut(s)	1743
AspS9I	GGNCC	4 cut(s)	365, 1306, 1627, 1755
AsuC2I	CCSGG	1 cut(s)	1791
AsuHPI	GGTGA	1 cut(s)	1651
AsuII	TTCGAA	1 cut(s)	493
AvaI	CYCGRG	1 cut(s)	1121
AvaII	GGWCC	3 cut(s)	365, 1627, 1755
BalI	TGGCCA	1 cut(s)	1326
BamHI	GGATCC	1 cut(s)	291
BanI	GGYRCC	1 cut(s)	328
BanII	GRGCYC	1 cut(s)	48
BarI	GAAGNNNNNNTAC	2 cut(s)	1070, 1102
BauI	CACGAG	1 cut(s)	1763
BbrPI	CACGTG	1 cut(s)	1846
BbsI	GAAGAC	2 cut(s)	122, 1414
Bbv12I	GWGCWC	1 cut(s)	48
BbvI	GCAGC	5 cut(s)	457, 1177, 1487, 1773, 1909
BccI	CCATC	5 cut(s)	97, 954, 1316, 1394, 1436
BceAI	ACGGC	1 cut(s)	1578
BciT130I	CCWGG	1 cut(s)	982
BclI	TGATCA	1 cut(s)	448
BcnI	CCSGG	1 cut(s)	1791
BcoDI	GTCTC	3 cut(s)	1043, 1088, 1890
BfaI	CTAG	9 cut(s)	134, 194, 219, 639, 705, 914, 1334, 1370, 1686
BfmI	CTRYAG	2 cut(s)	678, 1289
BfrI	CTTAAG	1 cut(s)	1901
BfuAI	ACCTGC	2 cut(s)	272, 1183
BisI	GCNGC	8 cut(s)	395, 471, 480, 1191, 1476, 1527, 1787, 1898
BlsI	GCNGC	8 cut(s)	396, 472, 481, 1192, 1477, 1528, 1788, 1899
Bme1390I	CCNGG	2 cut(s)	982, 1791
Bme18I	GGWCC	3 cut(s)	365, 1627, 1755
BmeT110I	CYCGRG	1 cut(s)	1121
BmgBI	CACGTC	3 cut(s)	743, 1028, 1456
BmgT120I	GGNCC	4 cut(s)	365, 1306, 1627, 1755
BmiI	GGNNCC	4 cut(s)	293, 330, 366, 1384
BmrFI	CCNGG	2 cut(s)	982, 1791
BmrI	ACTGGG	1 cut(s)	733
BmsI	GCATC	8 cut(s)	116, 243, 402, 505, 634, 1513, 1739, 1839
BmuI	ACTGGG	1 cut(s)	733
BoxI	GACNNNNGTC	1 cut(s)	534
BpiI	GAAGAC	2 cut(s)	122, 1414
BpmI	CTGGAG	2 cut(s)	958, 1618
Bpu10I	CCTNAGC	1 cut(s)	1252
Bpu14I	TTCGAA	1 cut(s)	493
BpuEI	CTTGAG	1 cut(s)	1910
BpuMI	CCSGG	1 cut(s)	1791
BsaAI	YACGTR	1 cut(s)	1846
BsaBI	GATNNNNATC	1 cut(s)	450
BsaI	GGTCTC	1 cut(s)	1088
BsaJI	CCNNGG	3 cut(s)	510, 1560, 1824
BsaXI	ACNNNNNCTCC	4 cut(s)	1145, 1175, 1686, 1716
Bsc4I	CCNNNNNNNGG	2 cut(s)	981, 1829
Bse1I	ACTGG	3 cut(s)	728, 975, 1655
Bse8I	GATNNNNATC	1 cut(s)	450
BseBI	CCWGG	1 cut(s)	982
BseDI	CCNNGG	3 cut(s)	510, 1560, 1824
BseGI	GGATG	4 cut(s)	10, 258, 520, 1386
BseJI	GATNNNNATC	1 cut(s)	450
BseLI	CCNNNNNNNGG	2 cut(s)	981, 1829
BseMII	CTCAG	4 cut(s)	333, 1227, 1389, 1634
BseNI	ACTGG	3 cut(s)	728, 975, 1655
BseRI	GAGGAG	2 cut(s)	833, 1710
BseXI	GCAGC	5 cut(s)	457, 1177, 1487, 1773, 1909
BseYI	CCCAGC	2 cut(s)	287, 1402
BsgI	GTGCAG	1 cut(s)	344
BshFI	GGCC	3 cut(s)	307, 1308, 1326
BshNI	GGYRCC	1 cut(s)	328
BsiHKAI	GWGCWC	1 cut(s)	48
BsiHKCI	CYCGRG	1 cut(s)	1121
BsiSI	CCGG	1 cut(s)	1791
BslFI	GGGAC	1 cut(s)	1466
BslI	CCNNNNNNNGG	2 cut(s)	981, 1829
BsmAI	GTCTC	3 cut(s)	1043, 1088, 1890
BsmFI	GGGAC	1 cut(s)	1466
BsmI	GAATGC	1 cut(s)	1852
BsnI	GGCC	3 cut(s)	307, 1308, 1326
Bso31I	GGTCTC	1 cut(s)	1088
BsoBI	CYCGRG	1 cut(s)	1121
Bsp119I	TTCGAA	1 cut(s)	493
Bsp1286I	GDGCHC	1 cut(s)	48
Bsp143I	GATC	5 cut(s)	187, 291, 448, 728, 1003
Bsp19I	CCATGG	1 cut(s)	1824
BspACI	CCGC	6 cut(s)	311, 394, 479, 770, 1280, 1526
BspANI	GGCC	3 cut(s)	307, 1308, 1326
BspCNI	CTCAG	4 cut(s)	332, 1228, 1390, 1635
BspLI	GGNNCC	4 cut(s)	293, 330, 366, 1384
BspMI	ACCTGC	2 cut(s)	272, 1183
BspPI	GGATC	4 cut(s)	195, 286, 299, 736
BspT104I	TTCGAA	1 cut(s)	493
BspT107I	GGYRCC	1 cut(s)	328
BspTI	CTTAAG	1 cut(s)	1901
BspTNI	GGTCTC	1 cut(s)	1088
BsrBI	CCGCTC	1 cut(s)	394
BsrI	ACTGG	3 cut(s)	728, 975, 1655
BssECI	CCNNGG	3 cut(s)	510, 1560, 1824
BssMI	GATC	5 cut(s)	187, 291, 448, 728, 1003
BssSI	CACGAG	1 cut(s)	1763
BssT1I	CCWWGG	2 cut(s)	510, 1824
Bst2BI	CACGAG	1 cut(s)	1763
Bst2UI	CCWGG	1 cut(s)	982
Bst4CI	ACNGT	6 cut(s)	63, 465, 593, 670, 679, 1512
BstAFI	CTTAAG	1 cut(s)	1901
BstAPI	GCANNNNNTGC	2 cut(s)	767, 1849
BstBAI	YACGTR	1 cut(s)	1846
BstBI	TTCGAA	1 cut(s)	493
BstC8I	GCNNGC	8 cut(s)	124, 139, 162, 327, 1310, 1328, 1796, 1908
BstDEI	CTNAG	9 cut(s)	235, 319, 812, 869, 1236, 1252, 1365, 1398, 1643
BstDSI	CCRYGG	2 cut(s)	1560, 1824
BstF5I	GGATG	4 cut(s)	10, 258, 520, 1386
BstHHI	GCGC	1 cut(s)	1743
BstKTI	GATC	5 cut(s)	190, 294, 451, 731, 1006
BstMAI	GTCTC	3 cut(s)	1043, 1088, 1890
BstMBI	GATC	5 cut(s)	187, 291, 448, 728, 1003
BstMWI	GCNNNNNNNGC	8 cut(s)	278, 304, 476, 479, 767, 1795, 1849, 1903
BstNI	CCWGG	1 cut(s)	982
BstNSI	RCATGY	3 cut(s)	164, 1490, 1798
BstPAI	GACNNNNGTC	1 cut(s)	534
BstSCI	CCNGG	2 cut(s)	980, 1789
BstSFI	CTRYAG	2 cut(s)	678, 1289
BstV1I	GCAGC	5 cut(s)	457, 1177, 1487, 1773, 1909
BstV2I	GAAGAC	2 cut(s)	122, 1414
BstX2I	RGATCY	2 cut(s)	187, 291
BstYI	RGATCY	2 cut(s)	187, 291
BsuRI	GGCC	3 cut(s)	307, 1308, 1326
BtgI	CCRYGG	2 cut(s)	1560, 1824
BtrI	CACGTC	3 cut(s)	743, 1028, 1456
BtsCI	GGATG	4 cut(s)	10, 258, 520, 1386
BtsIMutI	CAGTG	3 cut(s)	327, 1041, 1517
BveI	ACCTGC	2 cut(s)	272, 1183
Cac8I	GCNNGC	8 cut(s)	124, 139, 162, 327, 1310, 1328, 1796, 1908
CaiI	CAGNNNCTG	1 cut(s)	287
CfoI	GCGC	1 cut(s)	1743
Cfr13I	GGNCC	4 cut(s)	365, 1306, 1627, 1755
CseI	GACGC	1 cut(s)	1319
Csp6I	GTAC	2 cut(s)	909, 1126
CviQI	GTAC	2 cut(s)	909, 1126
DdeI	CTNAG	9 cut(s)	235, 319, 812, 869, 1236, 1252, 1365, 1398, 1643
DpnI	GATC	5 cut(s)	189, 293, 450, 730, 1005
DpnII	GATC	5 cut(s)	187, 291, 448, 728, 1003
EaeI	YGGCCR	1 cut(s)	1324
EciI	GGCGGA	1 cut(s)	1295
Ecl136II	GAGCTC	1 cut(s)	46
Eco130I	CCWWGG	2 cut(s)	510, 1824
Eco147I	AGGCCT	1 cut(s)	307
Eco24I	GRGCYC	1 cut(s)	48
Eco31I	GGTCTC	1 cut(s)	1088
Eco47I	GGWCC	3 cut(s)	365, 1627, 1755
Eco53kI	GAGCTC	1 cut(s)	46
Eco72I	CACGTG	1 cut(s)	1846
Eco88I	CYCGRG	1 cut(s)	1121
EcoICRI	GAGCTC	1 cut(s)	46
EcoO109I	RGGNCCY	2 cut(s)	365, 1306
EcoRI	GAATTC	2 cut(s)	807, 1216
EcoRII	CCWGG	1 cut(s)	980
EcoT14I	CCWWGG	2 cut(s)	510, 1824
EcoT22I	ATGCAT	4 cut(s)	116, 627, 1151, 1854
EcoT38I	GRGCYC	1 cut(s)	48
ErhI	CCWWGG	2 cut(s)	510, 1824
FalI	AAGNNNNNCTT	4 cut(s)	795, 827, 1865, 1897
FaqI	GGGAC	1 cut(s)	1466
FauNDI	CATATG	2 cut(s)	1036, 1448
FbaI	TGATCA	1 cut(s)	448
Fnu4HI	GCNGC	8 cut(s)	395, 471, 480, 1191, 1476, 1527, 1787, 1898
FokI	GGATG	4 cut(s)	17, 265, 527, 1373
FriOI	GRGCYC	1 cut(s)	48
Fsp4HI	GCNGC	8 cut(s)	395, 471, 480, 1191, 1476, 1527, 1787, 1898
FspBI	CTAG	9 cut(s)	134, 194, 219, 639, 705, 914, 1334, 1370, 1686
GlaI	GCGC	1 cut(s)	1742
GluI	GCNGC	8 cut(s)	395, 471, 480, 1191, 1476, 1527, 1787, 1898
GsaI	CCCAGC	2 cut(s)	291, 1406
GsuI	CTGGAG	2 cut(s)	958, 1618
HaeIII	GGCC	3 cut(s)	307, 1308, 1326
HapII	CCGG	1 cut(s)	1791
HgaI	GACGC	1 cut(s)	1319
HhaI	GCGC	1 cut(s)	1743
Hin6I	GCGC	1 cut(s)	1741
HinP1I	GCGC	1 cut(s)	1741
HincII	GTYRAC	3 cut(s)	19, 268, 529
HindII	GTYRAC	3 cut(s)	19, 268, 529
HindIII	AAGCTT	2 cut(s)	605, 1904
HinfI	GANTC	9 cut(s)	347, 548, 788, 903, 922, 1115, 1436, 1698, 1706
HpaI	GTTAAC	1 cut(s)	268
HpaII	CCGG	1 cut(s)	1791
HphI	GGTGA	1 cut(s)	1651
Hpy166II	GTNNAC	5 cut(s)	19, 268, 529, 911, 1560
Hpy188III	TCNNGA	6 cut(s)	900, 1112, 1121, 1334, 1342, 1889
Hpy8I	GTNNAC	5 cut(s)	19, 268, 529, 911, 1560
HpyAV	CCTTC	5 cut(s)	146, 337, 1072, 1625, 1867
HpyCH4III	ACNGT	6 cut(s)	63, 465, 593, 670, 679, 1512
HpyCH4IV	ACGT	6 cut(s)	716, 742, 1027, 1455, 1845, 1868
HpyF10VI	GCNNNNNNNGC	8 cut(s)	278, 304, 476, 479, 767, 1795, 1849, 1903
HpyF3I	CTNAG	9 cut(s)	235, 319, 812, 869, 1236, 1252, 1365, 1398, 1643
HpySE526I	ACGT	6 cut(s)	716, 742, 1027, 1455, 1845, 1868
HspAI	GCGC	1 cut(s)	1741
Ksp22I	TGATCA	1 cut(s)	448
KspAI	GTTAAC	1 cut(s)	268
Kzo9I	GATC	5 cut(s)	187, 291, 448, 728, 1003
LmnI	GCTCC	5 cut(s)	43, 278, 706, 1599, 1738
Lsp1109I	GCAGC	5 cut(s)	457, 1177, 1487, 1773, 1909
LweI	GCATC	8 cut(s)	116, 243, 402, 505, 634, 1513, 1739, 1839
MaeI	CTAG	9 cut(s)	134, 194, 219, 639, 705, 914, 1334, 1370, 1686
MaeII	ACGT	6 cut(s)	716, 742, 1027, 1455, 1845, 1868
MaeIII	GTNAC	6 cut(s)	35, 777, 1059, 1170, 1657, 1864
MalI	GATC	5 cut(s)	189, 293, 450, 730, 1005
MbiI	CCGCTC	1 cut(s)	394
MboI	GATC	5 cut(s)	187, 291, 448, 728, 1003
MboII	GAAGA	5 cut(s)	122, 482, 603, 1419, 1659
MfeI	CAATTG	3 cut(s)	455, 1184, 1750
MflI	RGATCY	2 cut(s)	187, 291
MhlI	GDGCHC	1 cut(s)	48
MlsI	TGGCCA	1 cut(s)	1326
MluNI	TGGCCA	1 cut(s)	1326
MlyI	GAGTC	1 cut(s)	1707
MmeI	TCCRAC	2 cut(s)	699, 1158
Mox20I	TGGCCA	1 cut(s)	1326
Mph1103I	ATGCAT	4 cut(s)	116, 627, 1151, 1854
MroXI	GAANNNNTTC	1 cut(s)	1381
MscI	TGGCCA	1 cut(s)	1326
MseI	TTAA	5 cut(s)	267, 540, 1245, 1776, 1902
MslI	CAYNNNNRTG	2 cut(s)	916, 1154
Msp20I	TGGCCA	1 cut(s)	1326
MspCI	CTTAAG	1 cut(s)	1901
MspI	CCGG	1 cut(s)	1791
MspR9I	CCNGG	2 cut(s)	982, 1791
MunI	CAATTG	3 cut(s)	455, 1184, 1750
Mva1269I	GAATGC	1 cut(s)	1852
MvaI	CCWGG	1 cut(s)	982
MwoI	GCNNNNNNNGC	8 cut(s)	278, 304, 476, 479, 767, 1795, 1849, 1903
NciI	CCSGG	1 cut(s)	1791
NcoI	CCATGG	1 cut(s)	1824
NdeI	CATATG	2 cut(s)	1036, 1448
NdeII	GATC	5 cut(s)	187, 291, 448, 728, 1003
NlaIV	GGNNCC	4 cut(s)	293, 330, 366, 1384
NmuCI	GTSAC	1 cut(s)	1657
NsiI	ATGCAT	4 cut(s)	116, 627, 1151, 1854
NspI	RCATGY	3 cut(s)	164, 1490, 1798
NspV	TTCGAA	1 cut(s)	493
OliI	CACNNNNGTG	1 cut(s)	916
PaeI	GCATGC	2 cut(s)	164, 1798
PaeR7I	CTCGAG	1 cut(s)	1121
PaqCI	CACCTGC	1 cut(s)	272
PceI	AGGCCT	1 cut(s)	307
PctI	GAATGC	1 cut(s)	1852
PdmI	GAANNNNTTC	1 cut(s)	1381
PfeI	GAWTC	8 cut(s)	347, 548, 788, 903, 922, 1115, 1436, 1706
PkrI	GCNGC	8 cut(s)	396, 472, 481, 1192, 1477, 1528, 1788, 1899
PleI	GAGTC	1 cut(s)	1706
PmaCI	CACGTG	1 cut(s)	1846
PmlI	CACGTG	1 cut(s)	1846
PpsI	GAGTC	1 cut(s)	1706
Ppu21I	YACGTR	1 cut(s)	1846
PpuMI	RGGWCCY	1 cut(s)	365
PshAI	GACNNNNGTC	1 cut(s)	534
Psp124BI	GAGCTC	1 cut(s)	48
Psp1406I	AACGTT	2 cut(s)	716, 1868
Psp5II	RGGWCCY	1 cut(s)	365
Psp6I	CCWGG	1 cut(s)	980
PspCI	CACGTG	1 cut(s)	1846
PspFI	CCCAGC	2 cut(s)	287, 1402
PspGI	CCWGG	1 cut(s)	980
PspN4I	GGNNCC	4 cut(s)	293, 330, 366, 1384
PspPI	GGNCC	4 cut(s)	365, 1306, 1627, 1755
PspPPI	RGGWCCY	1 cut(s)	365
PstNI	CAGNNNCTG	1 cut(s)	287
PsuI	RGATCY	2 cut(s)	187, 291
RsaI	GTAC	2 cut(s)	910, 1127
RsaNI	GTAC	2 cut(s)	909, 1126
RseI	CAYNNNNRTG	2 cut(s)	916, 1154
SacI	GAGCTC	1 cut(s)	48
SaqAI	TTAA	5 cut(s)	267, 540, 1245, 1776, 1902
SatI	GCNGC	8 cut(s)	395, 471, 480, 1191, 1476, 1527, 1787, 1898
Sau3AI	GATC	5 cut(s)	187, 291, 448, 728, 1003
Sau96I	GGNCC	4 cut(s)	365, 1306, 1627, 1755
SchI	GAGTC	1 cut(s)	1707
ScrFI	CCNGG	2 cut(s)	982, 1791
SduI	GDGCHC	1 cut(s)	48
SfaNI	GCATC	8 cut(s)	116, 243, 402, 505, 634, 1513, 1739, 1839
SfcI	CTRYAG	2 cut(s)	678, 1289
Sfr274I	CTCGAG	1 cut(s)	1121
SfuI	TTCGAA	1 cut(s)	493
SinI	GGWCC	3 cut(s)	365, 1627, 1755
SlaI	CTCGAG	1 cut(s)	1121
SmiMI	CAYNNNNRTG	2 cut(s)	916, 1154
SmlI	CTYRAG	3 cut(s)	1121, 1889, 1901
SmoI	CTYRAG	3 cut(s)	1121, 1889, 1901
SphI	GCATGC	2 cut(s)	164, 1798
SseBI	AGGCCT	1 cut(s)	307
SsiI	CCGC	6 cut(s)	311, 394, 479, 770, 1280, 1526
SspI	AATATT	1 cut(s)	1432
SspMI	CTAG	9 cut(s)	134, 194, 219, 639, 705, 914, 1334, 1370, 1686
SstI	GAGCTC	1 cut(s)	48
StuI	AGGCCT	1 cut(s)	307
StyD4I	CCNGG	2 cut(s)	980, 1789
StyI	CCWWGG	2 cut(s)	510, 1824
TaaI	ACNGT	6 cut(s)	63, 465, 593, 670, 679, 1512
TaiI	ACGT	6 cut(s)	719, 745, 1030, 1458, 1848, 1871
TaqI	TCGA	2 cut(s)	493, 1122
TatI	WGTACW	2 cut(s)	908, 1125
TauI	GCSGC	3 cut(s)	397, 482, 1529
TfiI	GAWTC	8 cut(s)	347, 548, 788, 903, 922, 1115, 1436, 1706
Tru1I	TTAA	5 cut(s)	267, 540, 1245, 1776, 1902
Tru9I	TTAA	5 cut(s)	267, 540, 1245, 1776, 1902
TscAI	CASTG	3 cut(s)	327, 1048, 1517
TseFI	GTSAC	1 cut(s)	1657
TseI	GCWGC	5 cut(s)	470, 1190, 1475, 1786, 1897
Tsp45I	GTSAC	1 cut(s)	1657
TspDTI	ATGAA	7 cut(s)	165, 474, 603, 617, 865, 1059, 1824
TspGWI	ACGGA	2 cut(s)	1078, 1545
TspRI	CASTG	3 cut(s)	327, 1048, 1517
Vha464I	CTTAAG	1 cut(s)	1901
VpaK11BI	GGWCC	3 cut(s)	365, 1627, 1755
XapI	RAATTY	4 cut(s)	807, 854, 1216, 1350
XbaI	TCTAGA	1 cut(s)	1333
XceI	RCATGY	3 cut(s)	164, 1490, 1798
XcmI	CCANNNNNNNNNTGG	2 cut(s)	29, 720
XhoI	CTCGAG	1 cut(s)	1121
XmnI	GAANNNNTTC	1 cut(s)	1381
XspI	CTAG	9 cut(s)	134, 194, 219, 639, 705, 914, 1334, 1370, 1686
Zsp2I	ATGCAT	4 cut(s)	116, 627, 1151, 1854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.