Encoded by
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27670 |
| fragaria_vesca | FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51542 FvH4_6g51551 |
| malus_domestica | MD09G1028200.v1.1 MD17G1029800.v1.1 |
| prunus_persica | Prupe.3G290300_v2.0.a1 Prupe.3G290500_v2.0.a1 |
| pyrus_communis | pycom111g02210 pycom111g02220 pycom17g02680 pycom17g02700 pycom17g02710 pycom17g02720 |
| rosa_chinensis | RchiOBHm_Chr2g0173001 |
| rosa_laevigata | RLG00000022148 |
| rosa_multiflora | Rmu_co8290889.1_g000001 Rmu_sc0012743.1_g000007 Rmu_sc0026490.1_g000001 Rmu_sc0032348.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00079360 |
| rosa_rugosa | Rorug02G0248700 Rorug02G0366500 Rorug02G0564400 Rorug02G0564500 Rorug02G0564800 Rorug05G0265600.1 |
| rosa_samantha | Rh2AG641000 Rh2AG641100 Rh2AG641600 Rh2AG643600 Rh2AG643800 Rh2BG654700 Rh2CG620000 Rh2DG668000 Rh2DG668100 |
| rosa_wichuraiana | Rw2G052910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 515 |
| AarI | CACCTGC | 1 cut(s) | 3911 |
| AatII | GACGTC | 1 cut(s) | 2076 |
| Acc16I | TGCGCA | 1 cut(s) | 4727 |
| Acc36I | ACCTGC | 2 cut(s) | 3911, 4822 |
| AccB1I | GGYRCC | 2 cut(s) | 2891, 3967 |
| AccBSI | CCGCTC | 2 cut(s) | 1145, 4033 |
| AccI | GTMKAC | 5 cut(s) | 297, 1053, 1111, 1403, 2106 |
| AccII | CGCG | 5 cut(s) | 195, 246, 269, 3074, 5484 |
| AccIII | TCCGGA | 1 cut(s) | 687 |
| AcoI | YGGCCR | 1 cut(s) | 4963 |
| AcsI | RAATTY | 8 cut(s) | 691, 1325, 2316, 2948, 4446, 4493, 4855, 4989 |
| AcuI | CTGAAG | 6 cut(s) | 638, 2184, 2196, 2499, 2654, 3672 |
| AcyI | GRCGYC | 3 cut(s) | 138, 590, 2073 |
| AfaI | GTAC | 8 cut(s) | 659, 1371, 1527, 2376, 3349, 3458, 4549, 4766 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1106, 1583, 1943, 2730, 2902, 4591, 5468 |
| AflII | CTTAAG | 2 cut(s) | 632, 5540 |
| AflIII | ACRYGT | 2 cut(s) | 1132, 3037 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 648, 3217, 3700 |
| AjiI | CACGTC | 3 cut(s) | 4382, 4667, 5095 |
| AjnI | CCWGG | 9 cut(s) | 1249, 1802, 2066, 2230, 2340, 2499, 2545, 3167, 4619 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 458, 490, 4431, 4463, 4898, 4930 |
| AleI | CACNNNNGTG | 4 cut(s) | 2034, 3113, 3284, 4555 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1073, 1105, 1833, 1865 |
| Alw21I | GWGCWC | 5 cut(s) | 201, 261, 1591, 2424, 3687 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3926 |
| Ama87I | CYCGRG | 2 cut(s) | 33, 4760 |
| Aor13HI | TCCGGA | 1 cut(s) | 687 |
| AoxI | GGCC | 5 cut(s) | 2262, 2277, 3944, 4945, 4963 |
| ApoI | RAATTY | 8 cut(s) | 691, 1325, 2316, 2948, 4446, 4493, 4855, 4989 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 222, 254, 1808, 1840 |
| AseI | ATTAAT | 1 cut(s) | 3020 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 651, 2394, 2723, 5020 |
| AspLEI | GCGC | 5 cut(s) | 271, 3472, 4728, 5382, 5484 |
| AspS9I | GGNCC | 9 cut(s) | 328, 1951, 2262, 2968, 4004, 4594, 4945, 5266, 5394 |
| AsuC2I | CCSGG | 3 cut(s) | 34, 35, 129 |
| AsuHPI | GGTGA | 4 cut(s) | 377, 2515, 3100, 5290 |
| AsuII | TTCGAA | 2 cut(s) | 287, 4132 |
| AvaI | CYCGRG | 2 cut(s) | 33, 4760 |
| AvaII | GGWCC | 7 cut(s) | 328, 1951, 2968, 4004, 4594, 5266, 5394 |
| BaeGI | GKGCMC | 1 cut(s) | 2896 |
| BalI | TGGCCA | 1 cut(s) | 4965 |
| BamHI | GGATCC | 3 cut(s) | 278, 1573, 3930 |
| BanI | GGYRCC | 2 cut(s) | 2891, 3967 |
| BanII | GRGCYC | 5 cut(s) | 201, 261, 1591, 2854, 3687 |
| BauI | CACGAG | 1 cut(s) | 5402 |
| BbsI | GAAGAC | 3 cut(s) | 644, 3761, 5053 |
| Bbv12I | GWGCWC | 5 cut(s) | 201, 261, 1591, 2424, 3687 |
| BbvCI | CCTCAGC | 2 cut(s) | 774, 2741 |
| BccI | CCATC | 6 cut(s) | 3634, 3736, 4593, 4955, 5033, 5075 |
| BceAI | ACGGC | 4 cut(s) | 50, 158, 238, 5217 |
| BciT130I | CCWGG | 9 cut(s) | 1251, 1804, 2068, 2232, 2342, 2501, 2547, 3169, 4621 |
| BclI | TGATCA | 2 cut(s) | 3046, 4087 |
| BcnI | CCSGG | 3 cut(s) | 34, 35, 129 |
| BfmI | CTRYAG | 2 cut(s) | 2103, 4317 |
| BfrI | CTTAAG | 2 cut(s) | 632, 5540 |
| BfuAI | ACCTGC | 2 cut(s) | 3911, 4822 |
| BglII | AGATCT | 4 cut(s) | 1153, 2199, 2861, 3157 |
| Bme18I | GGWCC | 7 cut(s) | 328, 1951, 2968, 4004, 4594, 5266, 5394 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 648, 3217, 3700 |
| BmeT110I | CYCGRG | 2 cut(s) | 33, 4760 |
| BmgBI | CACGTC | 3 cut(s) | 4382, 4667, 5095 |
| BmgT120I | GGNCC | 9 cut(s) | 328, 1951, 2262, 2968, 4004, 4594, 4945, 5266, 5394 |
| BmrI | ACTGGG | 3 cut(s) | 142, 1592, 4372 |
| BmuI | ACTGGG | 3 cut(s) | 142, 1592, 4372 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4173 |
| BpiI | GAAGAC | 3 cut(s) | 644, 3761, 5053 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1466, 1498, 1938, 1970, 3191, 3223 |
| BpmI | CTGGAG | 7 cut(s) | 44, 245, 275, 1083, 2258, 2363, 5257 |
| Bpu10I | CCTNAGC | 4 cut(s) | 774, 2741, 2976, 4891 |
| Bpu14I | TTCGAA | 2 cut(s) | 287, 4132 |
| BpuEI | CTTGAG | 7 cut(s) | 523, 998, 1440, 2662, 3010, 3267, 5549 |
| BpuMI | CCSGG | 3 cut(s) | 34, 35, 129 |
| Bsa29I | ATCGAT | 3 cut(s) | 818, 1412, 5445 |
| BsaAI | YACGTR | 1 cut(s) | 3263 |
| BsaBI | GATNNNNATC | 2 cut(s) | 74, 4089 |
| BsaHI | GRCGYC | 3 cut(s) | 138, 590, 2073 |
| BsaI | GGTCTC | 2 cut(s) | 499, 1802 |
| BsaWI | WCCGGW | 3 cut(s) | 330, 687, 845 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1106, 1583, 1943, 2730, 2902, 4591, 5468 |
| Bse3DI | GCAATG | 6 cut(s) | 358, 591, 627, 1497, 2160, 3459 |
| Bse8I | GATNNNNATC | 2 cut(s) | 74, 4089 |
| BseAI | TCCGGA | 1 cut(s) | 687 |
| BseBI | CCWGG | 9 cut(s) | 1251, 1804, 2068, 2232, 2342, 2501, 2547, 3169, 4621 |
| BseCI | ATCGAT | 3 cut(s) | 818, 1412, 5445 |
| BseJI | GATNNNNATC | 2 cut(s) | 74, 4089 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1106, 1583, 1943, 2730, 2902, 4591, 5468 |
| BseMI | GCAATG | 6 cut(s) | 358, 591, 627, 1497, 2160, 3459 |
| BseRI | GAGGAG | 4 cut(s) | 1094, 1370, 4472, 5349 |
| BseSI | GKGCMC | 1 cut(s) | 2896 |
| BseYI | CCCAGC | 4 cut(s) | 3405, 3464, 3926, 5041 |
| BsgI | GTGCAG | 4 cut(s) | 458, 995, 2571, 3983 |
| Bsh1236I | CGCG | 5 cut(s) | 195, 246, 269, 3074, 5484 |
| BshFI | GGCC | 5 cut(s) | 2264, 2279, 3946, 4947, 4965 |
| BshNI | GGYRCC | 2 cut(s) | 2891, 3967 |
| BshVI | ATCGAT | 3 cut(s) | 818, 1412, 5445 |
| BsiHKAI | GWGCWC | 5 cut(s) | 201, 261, 1591, 2424, 3687 |
| BsiHKCI | CYCGRG | 2 cut(s) | 33, 4760 |
| BsiSI | CCGG | 6 cut(s) | 34, 129, 331, 412, 688, 846 |
| BslFI | GGGAC | 4 cut(s) | 877, 2084, 3242, 5105 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1106, 1583, 1943, 2730, 2902, 4591, 5468 |
| BsmBI | CGTCTC | 4 cut(s) | 129, 562, 597, 4682 |
| BsmFI | GGGAC | 4 cut(s) | 877, 2084, 3242, 5105 |
| BsmI | GAATGC | 4 cut(s) | 2386, 2647, 3617, 5491 |
| BsnI | GGCC | 5 cut(s) | 2264, 2279, 3946, 4947, 4965 |
| Bso31I | GGTCTC | 2 cut(s) | 499, 1802 |
| BsoBI | CYCGRG | 2 cut(s) | 33, 4760 |
| Bsp119I | TTCGAA | 2 cut(s) | 287, 4132 |
| Bsp1286I | GDGCHC | 7 cut(s) | 201, 261, 1591, 2424, 2854, 2896, 3687 |
| Bsp13I | TCCGGA | 1 cut(s) | 687 |
| Bsp1407I | TGTACA | 1 cut(s) | 3456 |
| Bsp19I | CCATGG | 2 cut(s) | 2385, 5463 |
| Bsp68I | TCGCGA | 2 cut(s) | 195, 3074 |
| BspANI | GGCC | 5 cut(s) | 2264, 2279, 3946, 4947, 4965 |
| BspDI | ATCGAT | 3 cut(s) | 818, 1412, 5445 |
| BspEI | TCCGGA | 1 cut(s) | 687 |
| BspFNI | CGCG | 5 cut(s) | 195, 246, 269, 3074, 5484 |
| BspMI | ACCTGC | 2 cut(s) | 3911, 4822 |
| BspQI | GCTCTTC | 2 cut(s) | 341, 2859 |
| BspT104I | TTCGAA | 2 cut(s) | 287, 4132 |
| BspT107I | GGYRCC | 2 cut(s) | 2891, 3967 |
| BspTI | CTTAAG | 2 cut(s) | 632, 5540 |
| BspTNI | GGTCTC | 2 cut(s) | 499, 1802 |
| BsrBI | CCGCTC | 2 cut(s) | 1145, 4033 |
| BsrDI | GCAATG | 6 cut(s) | 358, 591, 627, 1497, 2160, 3459 |
| BsrGI | TGTACA | 1 cut(s) | 3456 |
| BssNAI | GTATAC | 1 cut(s) | 1404 |
| BssNI | GRCGYC | 3 cut(s) | 138, 590, 2073 |
| BssSI | CACGAG | 1 cut(s) | 5402 |
| BssT1I | CCWWGG | 5 cut(s) | 2280, 2385, 2596, 4149, 5463 |
| Bst1107I | GTATAC | 1 cut(s) | 1404 |
| Bst2BI | CACGAG | 1 cut(s) | 5402 |
| Bst2UI | CCWGG | 9 cut(s) | 1251, 1804, 2068, 2232, 2342, 2501, 2547, 3169, 4621 |
| Bst6I | CTCTTC | 4 cut(s) | 127, 341, 2272, 2859 |
| BstACI | GRCGYC | 3 cut(s) | 138, 590, 2073 |
| BstAFI | CTTAAG | 2 cut(s) | 632, 5540 |
| BstAUI | TGTACA | 1 cut(s) | 3456 |
| BstBAI | YACGTR | 1 cut(s) | 3263 |
| BstBI | TTCGAA | 2 cut(s) | 287, 4132 |
| BstDSI | CCRYGG | 4 cut(s) | 244, 2385, 5199, 5463 |
| BstEII | GGTNACC | 1 cut(s) | 909 |
| BstFNI | CGCG | 5 cut(s) | 195, 246, 269, 3074, 5484 |
| BstHHI | GCGC | 5 cut(s) | 271, 3472, 4728, 5382, 5484 |
| BstNI | CCWGG | 9 cut(s) | 1251, 1804, 2068, 2232, 2342, 2501, 2547, 3169, 4621 |
| BstNSI | RCATGY | 7 cut(s) | 1136, 1775, 2090, 3041, 3803, 5129, 5437 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4173 |
| BstPI | GGTNACC | 1 cut(s) | 909 |
| BstSFI | CTRYAG | 2 cut(s) | 2103, 4317 |
| BstSLI | GKGCMC | 1 cut(s) | 2896 |
| BstSNI | TACGTA | 1 cut(s) | 3263 |
| BstUI | CGCG | 5 cut(s) | 195, 246, 269, 3074, 5484 |
| BstV2I | GAAGAC | 3 cut(s) | 644, 3761, 5053 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1380 |
| BstZ17I | GTATAC | 1 cut(s) | 1404 |
| Bsu15I | ATCGAT | 3 cut(s) | 818, 1412, 5445 |
| BsuRI | GGCC | 5 cut(s) | 2264, 2279, 3946, 4947, 4965 |
| BsuTUI | ATCGAT | 3 cut(s) | 818, 1412, 5445 |
| BtgI | CCRYGG | 4 cut(s) | 244, 2385, 5199, 5463 |
| BtgZI | GCGATG | 2 cut(s) | 432, 2860 |
| BtrI | CACGTC | 3 cut(s) | 4382, 4667, 5095 |
| BtsI | GCAGTG | 1 cut(s) | 1536 |
| BtuMI | TCGCGA | 2 cut(s) | 195, 3074 |
| BveI | ACCTGC | 2 cut(s) | 3911, 4822 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3926 |
| CfoI | GCGC | 5 cut(s) | 271, 3472, 4728, 5382, 5484 |
| Cfr13I | GGNCC | 9 cut(s) | 328, 1951, 2262, 2968, 4004, 4594, 4945, 5266, 5394 |
| Cfr42I | CCGCGG | 1 cut(s) | 247 |
| Cfr9I | CCCGGG | 1 cut(s) | 33 |
| ClaI | ATCGAT | 3 cut(s) | 818, 1412, 5445 |
| CseI | GACGC | 4 cut(s) | 146, 579, 579, 2168 |
| CsiI | ACCWGGT | 1 cut(s) | 2545 |
| Csp6I | GTAC | 8 cut(s) | 658, 1370, 1526, 2375, 3348, 3457, 4548, 4765 |
| CviQI | GTAC | 8 cut(s) | 658, 1370, 1526, 2375, 3348, 3457, 4548, 4765 |
| DraI | TTTAAA | 1 cut(s) | 1323 |
| DriI | GACNNNNNGTC | 3 cut(s) | 648, 3217, 3700 |
| EaeI | YGGCCR | 1 cut(s) | 4963 |
| Eam1104I | CTCTTC | 4 cut(s) | 127, 341, 2272, 2859 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 648, 3217, 3700 |
| EarI | CTCTTC | 4 cut(s) | 127, 341, 2272, 2859 |
| EciI | GGCGGA | 2 cut(s) | 85, 4934 |
| Ecl136II | GAGCTC | 4 cut(s) | 199, 259, 1589, 3685 |
| Eco105I | TACGTA | 1 cut(s) | 3263 |
| Eco130I | CCWWGG | 5 cut(s) | 2280, 2385, 2596, 4149, 5463 |
| Eco147I | AGGCCT | 2 cut(s) | 2279, 3946 |
| Eco24I | GRGCYC | 5 cut(s) | 201, 261, 1591, 2854, 3687 |
| Eco31I | GGTCTC | 2 cut(s) | 499, 1802 |
| Eco32I | GATATC | 2 cut(s) | 2752, 3277 |
| Eco47I | GGWCC | 7 cut(s) | 328, 1951, 2968, 4004, 4594, 5266, 5394 |
| Eco53kI | GAGCTC | 4 cut(s) | 199, 259, 1589, 3685 |
| Eco57I | CTGAAG | 6 cut(s) | 638, 2184, 2196, 2499, 2654, 3672 |
| Eco88I | CYCGRG | 2 cut(s) | 33, 4760 |
| Eco91I | GGTNACC | 1 cut(s) | 909 |
| EcoICRI | GAGCTC | 4 cut(s) | 199, 259, 1589, 3685 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2262, 4004, 4945 |
| EcoO65I | GGTNACC | 1 cut(s) | 909 |
| EcoRI | GAATTC | 2 cut(s) | 4446, 4855 |
| EcoRII | CCWGG | 9 cut(s) | 1249, 1802, 2066, 2230, 2340, 2499, 2545, 3167, 4619 |
| EcoRV | GATATC | 2 cut(s) | 2752, 3277 |
| EcoT14I | CCWWGG | 5 cut(s) | 2280, 2385, 2596, 4149, 5463 |
| EcoT22I | ATGCAT | 6 cut(s) | 727, 1895, 3755, 4266, 4790, 5493 |
| EcoT38I | GRGCYC | 5 cut(s) | 201, 261, 1591, 2854, 3687 |
| ErhI | CCWWGG | 5 cut(s) | 2280, 2385, 2596, 4149, 5463 |
| Esp3I | CGTCTC | 4 cut(s) | 129, 562, 597, 4682 |
| FaqI | GGGAC | 4 cut(s) | 877, 2084, 3242, 5105 |
| FauI | CCCGC | 1 cut(s) | 178 |
| FauNDI | CATATG | 4 cut(s) | 2416, 3522, 4675, 5087 |
| FbaI | TGATCA | 2 cut(s) | 3046, 4087 |
| FblI | GTMKAC | 5 cut(s) | 297, 1053, 1111, 1403, 2106 |
| FriOI | GRGCYC | 5 cut(s) | 201, 261, 1591, 2854, 3687 |
| FspI | TGCGCA | 1 cut(s) | 4727 |
| GlaI | GCGC | 5 cut(s) | 270, 3471, 4727, 5381, 5483 |
| GsaI | CCCAGC | 4 cut(s) | 3409, 3468, 3930, 5045 |
| GsuI | CTGGAG | 7 cut(s) | 44, 245, 275, 1083, 2258, 2363, 5257 |
| HaeIII | GGCC | 5 cut(s) | 2264, 2279, 3946, 4947, 4965 |
| HapII | CCGG | 6 cut(s) | 34, 129, 331, 412, 688, 846 |
| HgaI | GACGC | 4 cut(s) | 146, 579, 579, 2168 |
| HhaI | GCGC | 5 cut(s) | 271, 3472, 4728, 5382, 5484 |
| Hin1I | GRCGYC | 3 cut(s) | 138, 590, 2073 |
| Hin6I | GCGC | 5 cut(s) | 269, 3470, 4726, 5380, 5482 |
| HinP1I | GCGC | 5 cut(s) | 269, 3470, 4726, 5380, 5482 |
| HincII | GTYRAC | 5 cut(s) | 298, 642, 1420, 3907, 4168 |
| HindII | GTYRAC | 5 cut(s) | 298, 642, 1420, 3907, 4168 |
| HindIII | AAGCTT | 2 cut(s) | 4244, 5543 |
| HpaI | GTTAAC | 1 cut(s) | 3907 |
| HpaII | CCGG | 6 cut(s) | 34, 129, 331, 412, 688, 846 |
| HphI | GGTGA | 4 cut(s) | 377, 2515, 3100, 5290 |
| Hpy99I | CGWCG | 6 cut(s) | 179, 182, 215, 221, 224, 299 |
| HpyCH4IV | ACGT | 7 cut(s) | 660, 2046, 2073, 3262, 4381, 4666, 5094 |
| HpySE526I | ACGT | 7 cut(s) | 660, 2046, 2073, 3262, 4381, 4666, 5094 |
| Hsp92I | GRCGYC | 3 cut(s) | 138, 590, 2073 |
| HspAI | GCGC | 5 cut(s) | 269, 3470, 4726, 5380, 5482 |
| Kpn2I | TCCGGA | 1 cut(s) | 687 |
| Ksp22I | TGATCA | 2 cut(s) | 3046, 4087 |
| KspAI | GTTAAC | 1 cut(s) | 3907 |
| KspI | CCGCGG | 1 cut(s) | 247 |
| LguI | GCTCTTC | 2 cut(s) | 341, 2859 |
| MabI | ACCWGGT | 1 cut(s) | 2545 |
| MaeII | ACGT | 7 cut(s) | 660, 2046, 2073, 3262, 4381, 4666, 5094 |
| MbiI | CCGCTC | 2 cut(s) | 1145, 4033 |
| MfeI | CAATTG | 4 cut(s) | 852, 4094, 4823, 5389 |
| MhlI | GDGCHC | 7 cut(s) | 201, 261, 1591, 2424, 2854, 2896, 3687 |
| MlsI | TGGCCA | 1 cut(s) | 4965 |
| MluNI | TGGCCA | 1 cut(s) | 4965 |
| MlyI | GAGTC | 6 cut(s) | 107, 113, 389, 1447, 3200, 5346 |
| MmeI | TCCRAC | 4 cut(s) | 141, 3717, 4338, 4797 |
| Mox20I | TGGCCA | 1 cut(s) | 4965 |
| Mph1103I | ATGCAT | 6 cut(s) | 727, 1895, 3755, 4266, 4790, 5493 |
| MroI | TCCGGA | 1 cut(s) | 687 |
| MroXI | GAANNNNTTC | 4 cut(s) | 651, 2394, 2723, 5020 |
| MscI | TGGCCA | 1 cut(s) | 4965 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1752, 1898, 2034, 3113, 3284, 4555, 4793 |
| Msp20I | TGGCCA | 1 cut(s) | 4965 |
| MspA1I | CMGCKG | 4 cut(s) | 246, 2939, 3182, 5168 |
| MspCI | CTTAAG | 2 cut(s) | 632, 5540 |
| MspI | CCGG | 6 cut(s) | 34, 129, 331, 412, 688, 846 |
| MunI | CAATTG | 4 cut(s) | 852, 4094, 4823, 5389 |
| Mva1269I | GAATGC | 4 cut(s) | 2386, 2647, 3617, 5491 |
| MvaI | CCWGG | 9 cut(s) | 1251, 1804, 2068, 2232, 2342, 2501, 2547, 3169, 4621 |
| MvnI | CGCG | 5 cut(s) | 195, 246, 269, 3074, 5484 |
| NciI | CCSGG | 3 cut(s) | 34, 35, 129 |
| NcoI | CCATGG | 2 cut(s) | 2385, 5463 |
| NdeI | CATATG | 4 cut(s) | 2416, 3522, 4675, 5087 |
| NmeAIII | GCCGAG | 1 cut(s) | 1949 |
| NmuCI | GTSAC | 2 cut(s) | 2813, 5296 |
| NruI | TCGCGA | 2 cut(s) | 195, 3074 |
| NsbI | TGCGCA | 1 cut(s) | 4727 |
| NsiI | ATGCAT | 6 cut(s) | 727, 1895, 3755, 4266, 4790, 5493 |
| NspI | RCATGY | 7 cut(s) | 1136, 1775, 2090, 3041, 3803, 5129, 5437 |
| NspV | TTCGAA | 2 cut(s) | 287, 4132 |
| OliI | CACNNNNGTG | 4 cut(s) | 2034, 3113, 3284, 4555 |
| PaeI | GCATGC | 1 cut(s) | 3803 |
| PaeR7I | CTCGAG | 1 cut(s) | 4760 |
| PaqCI | CACCTGC | 1 cut(s) | 3911 |
| PceI | AGGCCT | 2 cut(s) | 2279, 3946 |
| PciI | ACATGT | 2 cut(s) | 1132, 3037 |
| PciSI | GCTCTTC | 2 cut(s) | 341, 2859 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 216, 279, 5451 |
| PctI | GAATGC | 4 cut(s) | 2386, 2647, 3617, 5491 |
| PdmI | GAANNNNTTC | 4 cut(s) | 651, 2394, 2723, 5020 |
| PleI | GAGTC | 6 cut(s) | 107, 113, 388, 1447, 3200, 5345 |
| PpsI | GAGTC | 6 cut(s) | 107, 113, 388, 1447, 3200, 5345 |
| Ppu21I | YACGTR | 1 cut(s) | 3263 |
| PpuMI | RGGWCCY | 1 cut(s) | 4004 |
| PscI | ACATGT | 2 cut(s) | 1132, 3037 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4173 |
| PshBI | ATTAAT | 1 cut(s) | 3020 |
| PsiI | TTATAA | 1 cut(s) | 515 |
| Psp124BI | GAGCTC | 4 cut(s) | 201, 261, 1591, 3687 |
| Psp5II | RGGWCCY | 1 cut(s) | 4004 |
| Psp6I | CCWGG | 9 cut(s) | 1249, 1802, 2066, 2230, 2340, 2499, 2545, 3167, 4619 |
| PspEI | GGTNACC | 1 cut(s) | 909 |
| PspFI | CCCAGC | 4 cut(s) | 3405, 3464, 3926, 5041 |
| PspGI | CCWGG | 9 cut(s) | 1249, 1802, 2066, 2230, 2340, 2499, 2545, 3167, 4619 |
| PspPI | GGNCC | 9 cut(s) | 328, 1951, 2262, 2968, 4004, 4594, 4945, 5266, 5394 |
| PspPPI | RGGWCCY | 1 cut(s) | 4004 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3498, 3530 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3926 |
| PvuII | CAGCTG | 2 cut(s) | 2939, 5168 |
| RruI | TCGCGA | 2 cut(s) | 195, 3074 |
| RsaI | GTAC | 8 cut(s) | 659, 1371, 1527, 2376, 3349, 3458, 4549, 4766 |
| RsaNI | GTAC | 8 cut(s) | 658, 1370, 1526, 2375, 3348, 3457, 4548, 4765 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1752, 1898, 2034, 3113, 3284, 4555, 4793 |
| SacI | GAGCTC | 4 cut(s) | 201, 261, 1591, 3687 |
| SacII | CCGCGG | 1 cut(s) | 247 |
| SalI | GTCGAC | 1 cut(s) | 296 |
| SapI | GCTCTTC | 2 cut(s) | 341, 2859 |
| Sau96I | GGNCC | 9 cut(s) | 328, 1951, 2262, 2968, 4004, 4594, 4945, 5266, 5394 |
| SchI | GAGTC | 6 cut(s) | 107, 113, 389, 1447, 3200, 5346 |
| SduI | GDGCHC | 7 cut(s) | 201, 261, 1591, 2424, 2854, 2896, 3687 |
| SexAI | ACCWGGT | 1 cut(s) | 2545 |
| SfcI | CTRYAG | 2 cut(s) | 2103, 4317 |
| Sfr274I | CTCGAG | 1 cut(s) | 4760 |
| Sfr303I | CCGCGG | 1 cut(s) | 247 |
| SfuI | TTCGAA | 2 cut(s) | 287, 4132 |
| SgrBI | CCGCGG | 1 cut(s) | 247 |
| SinI | GGWCC | 7 cut(s) | 328, 1951, 2968, 4004, 4594, 5266, 5394 |
| SlaI | CTCGAG | 1 cut(s) | 4760 |
| SmaI | CCCGGG | 1 cut(s) | 35 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1752, 1898, 2034, 3113, 3284, 4555, 4793 |
| SnaBI | TACGTA | 1 cut(s) | 3263 |
| SphI | GCATGC | 1 cut(s) | 3803 |
| SseBI | AGGCCT | 2 cut(s) | 2279, 3946 |
| SspI | AATATT | 2 cut(s) | 2686, 5071 |
| SstI | GAGCTC | 4 cut(s) | 201, 261, 1591, 3687 |
| StuI | AGGCCT | 2 cut(s) | 2279, 3946 |
| StyI | CCWWGG | 5 cut(s) | 2280, 2385, 2596, 4149, 5463 |
| TaiI | ACGT | 7 cut(s) | 663, 2049, 2076, 3265, 4384, 4669, 5097 |
| TatI | WGTACW | 4 cut(s) | 2374, 3456, 4547, 4764 |
| TauI | GCSGC | 8 cut(s) | 207, 249, 1148, 2734, 3182, 4036, 4121, 5428 |
| TseFI | GTSAC | 2 cut(s) | 2813, 5296 |
| Tsp45I | GTSAC | 2 cut(s) | 2813, 5296 |
| TspGWI | ACGGA | 3 cut(s) | 2904, 3212, 5184 |
| TspMI | CCCGGG | 1 cut(s) | 33 |
| Vha464I | CTTAAG | 2 cut(s) | 632, 5540 |
| VpaK11BI | GGWCC | 7 cut(s) | 328, 1951, 2968, 4004, 4594, 5266, 5394 |
| VspI | ATTAAT | 1 cut(s) | 3020 |
| XapI | RAATTY | 8 cut(s) | 691, 1325, 2316, 2948, 4446, 4493, 4855, 4989 |
| XbaI | TCTAGA | 2 cut(s) | 1543, 3394 |
| XceI | RCATGY | 7 cut(s) | 1136, 1775, 2090, 3041, 3803, 5129, 5437 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 902, 3668, 4359 |
| XhoI | CTCGAG | 1 cut(s) | 4760 |
| XmaI | CCCGGG | 1 cut(s) | 33 |
| XmiI | GTMKAC | 5 cut(s) | 297, 1053, 1111, 1403, 2106 |
| XmnI | GAANNNNTTC | 4 cut(s) | 651, 2394, 2723, 5020 |
| ZraI | GACGTC | 1 cut(s) | 2074 |
| Zsp2I | ATGCAT | 6 cut(s) | 727, 1895, 3755, 4266, 4790, 5493 |