Encoded by
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27670 |
| fragaria_vesca | FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51330 FvH4_6g51542 FvH4_6g51551 |
| malus_domestica | MD09G1028200.v1.1 MD17G1029800.v1.1 |
| prunus_persica | Prupe.3G290300_v2.0.a1 Prupe.3G290500_v2.0.a1 |
| pyrus_communis | pycom111g02210 pycom111g02220 pycom17g02680 pycom17g02700 pycom17g02710 pycom17g02720 |
| rosa_chinensis | RchiOBHm_Chr2g0173001 |
| rosa_laevigata | RLG00000022148 |
| rosa_multiflora | Rmu_co8290889.1_g000001 Rmu_sc0012743.1_g000007 Rmu_sc0026490.1_g000001 Rmu_sc0032348.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00079360 |
| rosa_rugosa | Rorug02G0248700 Rorug02G0366500 Rorug02G0564400 Rorug02G0564500 Rorug02G0564800 Rorug05G0265600.1 |
| rosa_samantha | Rh2AG641000 Rh2AG641100 Rh2AG641600 Rh2AG643600 Rh2AG643800 Rh2BG654700 Rh2CG620000 Rh2DG668000 Rh2DG668100 |
| rosa_wichuraiana | Rw2G052910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 3 cut(s) | 1777, 3974, 4244 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 386 |
| AatII | GACGTC | 2 cut(s) | 14, 2154 |
| Acc36I | ACCTGC | 6 cut(s) | 517, 1777, 3974, 4244, 4984, 5592 |
| AccB1I | GGYRCC | 1 cut(s) | 4389 |
| AccI | GTMKAC | 4 cut(s) | 267, 378, 668, 3892 |
| AccII | CGCG | 4 cut(s) | 121, 282, 327, 461 |
| AcoI | YGGCCR | 3 cut(s) | 916, 1460, 1980 |
| AcsI | RAATTY | 8 cut(s) | 371, 775, 829, 894, 1402, 3011, 4141, 5408 |
| AcyI | GRCGYC | 2 cut(s) | 11, 2151 |
| AdeI | CACNNNGTG | 2 cut(s) | 970, 2963 |
| AfeI | AGCGCT | 1 cut(s) | 28 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 43, 301, 1661, 1882, 2021, 2314, 4425, 4519, 5263 |
| AflII | CTTAAG | 2 cut(s) | 586, 3548 |
| AflIII | ACRYGT | 2 cut(s) | 3100, 3880 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 732 |
| AjnI | CCWGG | 8 cut(s) | 1330, 1371, 2144, 2308, 2623, 3230, 3324, 5001 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 542, 574 |
| AleI | CACNNNNGTG | 2 cut(s) | 2112, 4373 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1132, 1164 |
| Alw21I | GWGCWC | 7 cut(s) | 342, 1669, 2420, 2959, 3750, 4872, 5163 |
| Alw44I | GTGCAC | 1 cut(s) | 2955 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1769, 3989, 4446 |
| Ama87I | CYCGRG | 2 cut(s) | 3621, 5591 |
| Aor51HI | AGCGCT | 1 cut(s) | 28 |
| AoxI | GGCC | 7 cut(s) | 639, 672, 916, 1460, 1980, 2209, 2355 |
| ApaLI | GTGCAC | 1 cut(s) | 2955 |
| ApoI | RAATTY | 8 cut(s) | 371, 775, 829, 894, 1402, 3011, 4141, 5408 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1886, 1918 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1131, 1510, 2472 |
| AspA2I | CCTAGG | 1 cut(s) | 4406 |
| AspLEI | GCGC | 3 cut(s) | 29, 56, 5269 |
| AspS9I | GGNCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| AsuC2I | CCSGG | 1 cut(s) | 216 |
| AsuHPI | GGTGA | 5 cut(s) | 2297, 2593, 3340, 5353, 5489 |
| AsuII | TTCGAA | 1 cut(s) | 4195 |
| AvaI | CYCGRG | 2 cut(s) | 3621, 5591 |
| AvaII | GGWCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| AvrII | CCTAGG | 1 cut(s) | 4406 |
| AxyI | CCTNAGG | 1 cut(s) | 4514 |
| BaeGI | GKGCMC | 2 cut(s) | 2959, 3535 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 4476, 4509, 5550, 5583 |
| BalI | TGGCCA | 2 cut(s) | 918, 1462 |
| BamHI | GGATCC | 4 cut(s) | 1375, 1651, 3993, 4508 |
| BanI | GGYRCC | 1 cut(s) | 4389 |
| BanII | GRGCYC | 4 cut(s) | 342, 945, 1669, 3750 |
| BbsI | GAAGAC | 1 cut(s) | 1503 |
| Bbv12I | GWGCWC | 7 cut(s) | 342, 1669, 2420, 2959, 3750, 4872, 5163 |
| BbvCI | CCTCAGC | 1 cut(s) | 858 |
| BceAI | ACGGC | 6 cut(s) | 137, 245, 687, 5280, 5324, 5544 |
| BciT130I | CCWGG | 8 cut(s) | 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| BciVI | GTATCC | 1 cut(s) | 612 |
| BclI | TGATCA | 1 cut(s) | 3109 |
| BcnI | CCSGG | 1 cut(s) | 216 |
| BfmI | CTRYAG | 3 cut(s) | 4711, 4991, 5270 |
| BfoI | RGCGCY | 2 cut(s) | 30, 5270 |
| BfrI | CTTAAG | 2 cut(s) | 586, 3548 |
| BfuAI | ACCTGC | 6 cut(s) | 517, 1777, 3974, 4244, 4984, 5592 |
| BfuI | GTATCC | 1 cut(s) | 612 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 5618 |
| BglII | AGATCT | 4 cut(s) | 1454, 2924, 3220, 4657 |
| BlnI | CCTAGG | 1 cut(s) | 4406 |
| BlpI | GCTNAGC | 2 cut(s) | 5067, 5345 |
| BmcAI | AGTACT | 3 cut(s) | 194, 1615, 3505 |
| Bme1390I | CCNGG | 9 cut(s) | 216, 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| Bme18I | GGWCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 732 |
| BmeT110I | CYCGRG | 2 cut(s) | 3621, 5591 |
| BmgT120I | GGNCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| BmrFI | CCNGG | 9 cut(s) | 216, 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| BmrI | ACTGGG | 2 cut(s) | 1522, 3537 |
| BmuI | ACTGGG | 2 cut(s) | 1522, 3537 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1507 |
| BpiI | GAAGAC | 1 cut(s) | 1503 |
| BpmI | CTGGAG | 6 cut(s) | 125, 131, 326, 356, 2336, 5320 |
| Bpu10I | CCTNAGC | 3 cut(s) | 858, 2359, 4464 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 5067, 5345 |
| Bpu14I | TTCGAA | 1 cut(s) | 4195 |
| BpuEI | CTTGAG | 5 cut(s) | 1082, 1518, 3073, 4637, 4709 |
| BpuMI | CCSGG | 1 cut(s) | 216 |
| BsaBI | GATNNNNATC | 3 cut(s) | 161, 1315, 5287 |
| BsaHI | GRCGYC | 2 cut(s) | 11, 2151 |
| BsaI | GGTCTC | 3 cut(s) | 1880, 2347, 3769 |
| BsaWI | WCCGGW | 1 cut(s) | 2672 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 43, 301, 1661, 1882, 2021, 2314, 4425, 4519, 5263 |
| Bse21I | CCTNAGG | 1 cut(s) | 4514 |
| Bse3DI | GCAATG | 3 cut(s) | 439, 1638, 4357 |
| Bse8I | GATNNNNATC | 3 cut(s) | 161, 1315, 5287 |
| BseBI | CCWGG | 8 cut(s) | 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| BseJI | GATNNNNATC | 3 cut(s) | 161, 1315, 5287 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 43, 301, 1661, 1882, 2021, 2314, 4425, 4519, 5263 |
| BseMI | GCAATG | 3 cut(s) | 439, 1638, 4357 |
| BseRI | GAGGAG | 6 cut(s) | 442, 1175, 2830, 3198, 4943, 5412 |
| BseSI | GKGCMC | 2 cut(s) | 2959, 3535 |
| BseYI | CCCAGC | 4 cut(s) | 1580, 2803, 3989, 5104 |
| BsgI | GTGCAG | 4 cut(s) | 542, 2202, 2649, 4046 |
| Bsh1236I | CGCG | 4 cut(s) | 121, 282, 327, 461 |
| Bsh1285I | CGRYCG | 1 cut(s) | 500 |
| BshFI | GGCC | 7 cut(s) | 641, 674, 918, 1462, 1982, 2211, 2357 |
| BshNI | GGYRCC | 1 cut(s) | 4389 |
| BsiEI | CGRYCG | 1 cut(s) | 500 |
| BsiHKAI | GWGCWC | 7 cut(s) | 342, 1669, 2420, 2959, 3750, 4872, 5163 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3621, 5591 |
| BsiSI | CCGG | 3 cut(s) | 216, 2673, 3825 |
| BslFI | GGGAC | 4 cut(s) | 2162, 3796, 4357, 5471 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 43, 301, 1661, 1882, 2021, 2314, 4425, 4519, 5263 |
| BsmBI | CGTCTC | 2 cut(s) | 66, 72 |
| BsmFI | GGGAC | 4 cut(s) | 2162, 3796, 4357, 5471 |
| BsmI | GAATGC | 1 cut(s) | 1560 |
| BsnI | GGCC | 7 cut(s) | 641, 674, 918, 1462, 1982, 2211, 2357 |
| Bso31I | GGTCTC | 3 cut(s) | 1880, 2347, 3769 |
| BsoBI | CYCGRG | 2 cut(s) | 3621, 5591 |
| Bsp119I | TTCGAA | 1 cut(s) | 4195 |
| Bsp1286I | GDGCHC | 9 cut(s) | 342, 945, 1669, 2420, 2959, 3535, 3750, 4872, 5163 |
| Bsp1407I | TGTACA | 2 cut(s) | 3519, 3842 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 5067, 5345 |
| Bsp68I | TCGCGA | 1 cut(s) | 282 |
| BspANI | GGCC | 7 cut(s) | 641, 674, 918, 1462, 1982, 2211, 2357 |
| BspFNI | CGCG | 4 cut(s) | 121, 282, 327, 461 |
| BspHI | TCATGA | 2 cut(s) | 865, 1441 |
| BspMAI | CTGCAG | 1 cut(s) | 4995 |
| BspMI | ACCTGC | 6 cut(s) | 517, 1777, 3974, 4244, 4984, 5592 |
| BspT104I | TTCGAA | 1 cut(s) | 4195 |
| BspT107I | GGYRCC | 1 cut(s) | 4389 |
| BspTI | CTTAAG | 2 cut(s) | 586, 3548 |
| BspTNI | GGTCTC | 3 cut(s) | 1880, 2347, 3769 |
| BsrDI | GCAATG | 3 cut(s) | 439, 1638, 4357 |
| BsrGI | TGTACA | 2 cut(s) | 3519, 3842 |
| BssNI | GRCGYC | 2 cut(s) | 11, 2151 |
| BssT1I | CCWWGG | 4 cut(s) | 3201, 4212, 4406, 4419 |
| Bst2UI | CCWGG | 8 cut(s) | 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| Bst6I | CTCTTC | 7 cut(s) | 214, 2350, 2882, 2904, 4729, 5322, 5379 |
| BstACI | GRCGYC | 2 cut(s) | 11, 2151 |
| BstAFI | CTTAAG | 2 cut(s) | 586, 3548 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 532, 2963, 3539, 5584 |
| BstAUI | TGTACA | 2 cut(s) | 3519, 3842 |
| BstBI | TTCGAA | 1 cut(s) | 4195 |
| BstC8I | GCNNGC | 5 cut(s) | 284, 916, 1680, 2053, 5610 |
| BstDSI | CCRYGG | 4 cut(s) | 325, 459, 5262, 5526 |
| BstEII | GGTNACC | 1 cut(s) | 4996 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1659, 4517 |
| BstFNI | CGCG | 4 cut(s) | 121, 282, 327, 461 |
| BstH2I | RGCGCY | 2 cut(s) | 30, 5270 |
| BstHHI | GCGC | 3 cut(s) | 29, 56, 5269 |
| BstMCI | CGRYCG | 1 cut(s) | 500 |
| BstNI | CCWGG | 8 cut(s) | 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1507 |
| BstPI | GGTNACC | 1 cut(s) | 4996 |
| BstSCI | CCNGG | 9 cut(s) | 214, 1330, 1371, 2144, 2308, 2623, 3230, 3324, 5001 |
| BstSFI | CTRYAG | 3 cut(s) | 4711, 4991, 5270 |
| BstSLI | GKGCMC | 2 cut(s) | 2959, 3535 |
| BstUI | CGCG | 4 cut(s) | 121, 282, 327, 461 |
| BstV2I | GAAGAC | 1 cut(s) | 1503 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3950 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4514 |
| BsuI | GTATCC | 1 cut(s) | 612 |
| BsuRI | GGCC | 7 cut(s) | 641, 674, 918, 1462, 1982, 2211, 2357 |
| BtgI | CCRYGG | 4 cut(s) | 325, 459, 5262, 5526 |
| BtsI | GCAGTG | 2 cut(s) | 104, 704 |
| BtuMI | TCGCGA | 1 cut(s) | 282 |
| BveI | ACCTGC | 6 cut(s) | 517, 1777, 3974, 4244, 4984, 5592 |
| Cac8I | GCNNGC | 5 cut(s) | 284, 916, 1680, 2053, 5610 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1769, 3989, 4446 |
| CciI | TCATGA | 2 cut(s) | 865, 1441 |
| CfoI | GCGC | 3 cut(s) | 29, 56, 5269 |
| Cfr13I | GGNCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| Cfr42I | CCGCGG | 2 cut(s) | 328, 462 |
| CseI | GACGC | 4 cut(s) | 48, 1349, 4452, 4900 |
| CsiI | ACCWGGT | 1 cut(s) | 2623 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2264, 2299, 3657, 3692 |
| DraIII | CACNNNGTG | 2 cut(s) | 970, 2963 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 386 |
| DriI | GACNNNNNGTC | 1 cut(s) | 732 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 386 |
| EaeI | YGGCCR | 3 cut(s) | 916, 1460, 1980 |
| Eam1104I | CTCTTC | 7 cut(s) | 214, 2350, 2882, 2904, 4729, 5322, 5379 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 732 |
| EarI | CTCTTC | 7 cut(s) | 214, 2350, 2882, 2904, 4729, 5322, 5379 |
| EciI | GGCGGA | 4 cut(s) | 172, 352, 445, 2825 |
| Ecl136II | GAGCTC | 3 cut(s) | 340, 1667, 3748 |
| Eco130I | CCWWGG | 4 cut(s) | 3201, 4212, 4406, 4419 |
| Eco147I | AGGCCT | 1 cut(s) | 2357 |
| Eco24I | GRGCYC | 4 cut(s) | 342, 945, 1669, 3750 |
| Eco31I | GGTCTC | 3 cut(s) | 1880, 2347, 3769 |
| Eco32I | GATATC | 5 cut(s) | 319, 1313, 2376, 2815, 3466 |
| Eco47I | GGWCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| Eco47III | AGCGCT | 1 cut(s) | 28 |
| Eco53kI | GAGCTC | 3 cut(s) | 340, 1667, 3748 |
| Eco81I | CCTNAGG | 1 cut(s) | 4514 |
| Eco88I | CYCGRG | 2 cut(s) | 3621, 5591 |
| Eco91I | GGTNACC | 1 cut(s) | 4996 |
| EcoICRI | GAGCTC | 3 cut(s) | 340, 1667, 3748 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1659, 4517 |
| EcoO109I | RGGNCCY | 3 cut(s) | 3651, 3783, 4067 |
| EcoO65I | GGTNACC | 1 cut(s) | 4996 |
| EcoRI | GAATTC | 2 cut(s) | 4141, 5408 |
| EcoRII | CCWGG | 8 cut(s) | 1330, 1371, 2144, 2308, 2623, 3230, 3324, 5001 |
| EcoRV | GATATC | 5 cut(s) | 319, 1313, 2376, 2815, 3466 |
| EcoT14I | CCWWGG | 4 cut(s) | 3201, 4212, 4406, 4419 |
| EcoT22I | ATGCAT | 6 cut(s) | 811, 1599, 1973, 4329, 4887, 5556 |
| EcoT38I | GRGCYC | 4 cut(s) | 342, 945, 1669, 3750 |
| ErhI | CCWWGG | 4 cut(s) | 3201, 4212, 4406, 4419 |
| Esp3I | CGTCTC | 2 cut(s) | 66, 72 |
| FaqI | GGGAC | 4 cut(s) | 2162, 3796, 4357, 5471 |
| FauI | CCCGC | 7 cut(s) | 114, 265, 320, 332, 4334, 5466, 5496 |
| FauNDI | CATATG | 3 cut(s) | 1967, 3585, 4747 |
| FbaI | TGATCA | 1 cut(s) | 3109 |
| FblI | GTMKAC | 4 cut(s) | 267, 378, 668, 3892 |
| FriOI | GRGCYC | 4 cut(s) | 342, 945, 1669, 3750 |
| GlaI | GCGC | 3 cut(s) | 28, 55, 5268 |
| GsaI | CCCAGC | 4 cut(s) | 1584, 2807, 3993, 5108 |
| GsuI | CTGGAG | 6 cut(s) | 125, 131, 326, 356, 2336, 5320 |
| HaeII | RGCGCY | 2 cut(s) | 30, 5270 |
| HaeIII | GGCC | 7 cut(s) | 641, 674, 918, 1462, 1982, 2211, 2357 |
| HapII | CCGG | 3 cut(s) | 216, 2673, 3825 |
| HgaI | GACGC | 4 cut(s) | 48, 1349, 4452, 4900 |
| HhaI | GCGC | 3 cut(s) | 29, 56, 5269 |
| Hin1I | GRCGYC | 2 cut(s) | 11, 2151 |
| Hin6I | GCGC | 3 cut(s) | 27, 54, 5267 |
| HinP1I | GCGC | 3 cut(s) | 27, 54, 5267 |
| HincII | GTYRAC | 6 cut(s) | 268, 379, 669, 726, 1498, 4231 |
| HindII | GTYRAC | 6 cut(s) | 268, 379, 669, 726, 1498, 4231 |
| HindIII | AAGCTT | 4 cut(s) | 4307, 4765, 4815, 5051 |
| HpaII | CCGG | 3 cut(s) | 216, 2673, 3825 |
| HphI | GGTGA | 5 cut(s) | 2297, 2593, 3340, 5353, 5489 |
| Hpy99I | CGWCG | 8 cut(s) | 13, 16, 139, 266, 269, 670, 673, 2799 |
| HpyCH4IV | ACGT | 7 cut(s) | 11, 1031, 1864, 2124, 2151, 2797, 4491 |
| HpySE526I | ACGT | 7 cut(s) | 11, 1031, 1864, 2124, 2151, 2797, 4491 |
| Hsp92I | GRCGYC | 2 cut(s) | 11, 2151 |
| HspAI | GCGC | 3 cut(s) | 27, 54, 5267 |
| Ksp22I | TGATCA | 1 cut(s) | 3109 |
| KspI | CCGCGG | 2 cut(s) | 328, 462 |
| MabI | ACCWGGT | 1 cut(s) | 2623 |
| MaeII | ACGT | 7 cut(s) | 11, 1031, 1864, 2124, 2151, 2797, 4491 |
| MfeI | CAATTG | 4 cut(s) | 1299, 1575, 4157, 5452 |
| MhlI | GDGCHC | 9 cut(s) | 342, 945, 1669, 2420, 2959, 3535, 3750, 4872, 5163 |
| MlsI | TGGCCA | 2 cut(s) | 918, 1462 |
| MluNI | TGGCCA | 2 cut(s) | 918, 1462 |
| MlyI | GAGTC | 8 cut(s) | 194, 200, 299, 460, 518, 2327, 4820, 5378 |
| MmeI | TCCRAC | 5 cut(s) | 228, 492, 3264, 4040, 4508 |
| Mox20I | TGGCCA | 2 cut(s) | 918, 1462 |
| Mph1103I | ATGCAT | 6 cut(s) | 811, 1599, 1973, 4329, 4887, 5556 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1131, 1510, 2472 |
| MscI | TGGCCA | 2 cut(s) | 918, 1462 |
| MslI | CAYNNNNRTG | 6 cut(s) | 870, 1976, 2112, 3948, 4373, 5193 |
| Msp20I | TGGCCA | 2 cut(s) | 918, 1462 |
| MspA1I | CMGCKG | 5 cut(s) | 327, 461, 914, 3002, 5241 |
| MspCI | CTTAAG | 2 cut(s) | 586, 3548 |
| MspI | CCGG | 3 cut(s) | 216, 2673, 3825 |
| MspR9I | CCNGG | 9 cut(s) | 216, 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| MunI | CAATTG | 4 cut(s) | 1299, 1575, 4157, 5452 |
| Mva1269I | GAATGC | 1 cut(s) | 1560 |
| MvaI | CCWGG | 8 cut(s) | 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| MvnI | CGCG | 4 cut(s) | 121, 282, 327, 461 |
| NciI | CCSGG | 1 cut(s) | 216 |
| NdeI | CATATG | 3 cut(s) | 1967, 3585, 4747 |
| NmuCI | GTSAC | 7 cut(s) | 578, 2319, 2876, 3432, 4375, 4888, 5359 |
| NruI | TCGCGA | 1 cut(s) | 282 |
| NsiI | ATGCAT | 6 cut(s) | 811, 1599, 1973, 4329, 4887, 5556 |
| NspV | TTCGAA | 1 cut(s) | 4195 |
| OliI | CACNNNNGTG | 2 cut(s) | 2112, 4373 |
| PaeR7I | CTCGAG | 1 cut(s) | 5591 |
| PagI | TCATGA | 2 cut(s) | 865, 1441 |
| PaqCI | CACCTGC | 3 cut(s) | 1777, 3974, 4244 |
| PceI | AGGCCT | 1 cut(s) | 2357 |
| PciI | ACATGT | 2 cut(s) | 3100, 3880 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 384 |
| PctI | GAATGC | 1 cut(s) | 1560 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1131, 1510, 2472 |
| PfoI | TCCNGGA | 1 cut(s) | 1371 |
| Ple19I | CGATCG | 1 cut(s) | 500 |
| PleI | GAGTC | 8 cut(s) | 194, 200, 299, 460, 517, 2326, 4820, 5378 |
| PpsI | GAGTC | 8 cut(s) | 194, 200, 299, 460, 517, 2326, 4820, 5378 |
| PpuMI | RGGWCCY | 3 cut(s) | 3651, 3783, 4067 |
| PscI | ACATGT | 2 cut(s) | 3100, 3880 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1507 |
| Psp124BI | GAGCTC | 3 cut(s) | 342, 1669, 3750 |
| Psp5II | RGGWCCY | 3 cut(s) | 3651, 3783, 4067 |
| Psp6I | CCWGG | 8 cut(s) | 1330, 1371, 2144, 2308, 2623, 3230, 3324, 5001 |
| PspEI | GGTNACC | 1 cut(s) | 4996 |
| PspFI | CCCAGC | 4 cut(s) | 1580, 2803, 3989, 5104 |
| PspGI | CCWGG | 8 cut(s) | 1330, 1371, 2144, 2308, 2623, 3230, 3324, 5001 |
| PspPI | GGNCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| PspPPI | RGGWCCY | 3 cut(s) | 3651, 3783, 4067 |
| PstI | CTGCAG | 1 cut(s) | 4995 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1769, 3989, 4446 |
| PvuI | CGATCG | 1 cut(s) | 500 |
| PvuII | CAGCTG | 3 cut(s) | 914, 3002, 5241 |
| RruI | TCGCGA | 1 cut(s) | 282 |
| RseI | CAYNNNNRTG | 6 cut(s) | 870, 1976, 2112, 3948, 4373, 5193 |
| SacI | GAGCTC | 3 cut(s) | 342, 1669, 3750 |
| SacII | CCGCGG | 2 cut(s) | 328, 462 |
| SalI | GTCGAC | 3 cut(s) | 266, 377, 667 |
| Sau96I | GGNCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| SbfI | CCTGCAGG | 1 cut(s) | 4995 |
| ScaI | AGTACT | 3 cut(s) | 194, 1615, 3505 |
| SchI | GAGTC | 8 cut(s) | 194, 200, 299, 460, 518, 2327, 4820, 5378 |
| ScrFI | CCNGG | 9 cut(s) | 216, 1332, 1373, 2146, 2310, 2625, 3232, 3326, 5003 |
| SdaI | CCTGCAGG | 1 cut(s) | 4995 |
| SduI | GDGCHC | 9 cut(s) | 342, 945, 1669, 2420, 2959, 3535, 3750, 4872, 5163 |
| SexAI | ACCWGGT | 1 cut(s) | 2623 |
| SfcI | CTRYAG | 3 cut(s) | 4711, 4991, 5270 |
| Sfr274I | CTCGAG | 1 cut(s) | 5591 |
| Sfr303I | CCGCGG | 2 cut(s) | 328, 462 |
| SfuI | TTCGAA | 1 cut(s) | 4195 |
| SgrBI | CCGCGG | 2 cut(s) | 328, 462 |
| SgrDI | CGTCGACG | 1 cut(s) | 667 |
| SinI | GGWCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| SlaI | CTCGAG | 1 cut(s) | 5591 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 870, 1976, 2112, 3948, 4373, 5193 |
| SmlI | CTYRAG | 8 cut(s) | 586, 1061, 1533, 3088, 3548, 4616, 4688, 5591 |
| SmoI | CTYRAG | 8 cut(s) | 586, 1061, 1533, 3088, 3548, 4616, 4688, 5591 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 4995 |
| SseBI | AGGCCT | 1 cut(s) | 2357 |
| SspI | AATATT | 3 cut(s) | 2446, 2749, 2938 |
| SstI | GAGCTC | 3 cut(s) | 342, 1669, 3750 |
| StuI | AGGCCT | 1 cut(s) | 2357 |
| StyD4I | CCNGG | 9 cut(s) | 214, 1330, 1371, 2144, 2308, 2623, 3230, 3324, 5001 |
| StyI | CCWWGG | 4 cut(s) | 3201, 4212, 4406, 4419 |
| TaiI | ACGT | 7 cut(s) | 14, 1034, 1867, 2127, 2154, 2800, 4494 |
| TatI | WGTACW | 9 cut(s) | 192, 1479, 1613, 2452, 3503, 3519, 3718, 3842, 4836 |
| TauI | GCSGC | 3 cut(s) | 461, 1985, 2906 |
| TseFI | GTSAC | 7 cut(s) | 578, 2319, 2876, 3432, 4375, 4888, 5359 |
| Tsp45I | GTSAC | 7 cut(s) | 578, 2319, 2876, 3432, 4375, 4888, 5359 |
| TspGWI | ACGGA | 4 cut(s) | 54, 462, 3867, 4789 |
| Vha464I | CTTAAG | 2 cut(s) | 586, 3548 |
| VneI | GTGCAC | 1 cut(s) | 2955 |
| VpaK11BI | GGWCC | 8 cut(s) | 91, 360, 3031, 3651, 3783, 4067, 5329, 5457 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1659, 4517 |
| XapI | RAATTY | 8 cut(s) | 371, 775, 829, 894, 1402, 3011, 4141, 5408 |
| XbaI | TCTAGA | 1 cut(s) | 4831 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 926, 986, 1645, 4422 |
| XhoI | CTCGAG | 1 cut(s) | 5591 |
| XmaJI | CCTAGG | 1 cut(s) | 4406 |
| XmiI | GTMKAC | 4 cut(s) | 267, 378, 668, 3892 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1131, 1510, 2472 |
| ZraI | GACGTC | 2 cut(s) | 12, 2152 |
| ZrmI | AGTACT | 3 cut(s) | 194, 1615, 3505 |
| Zsp2I | ATGCAT | 6 cut(s) | 811, 1599, 1973, 4329, 4887, 5556 |