Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004162

Physical Location & Seq

Genomic Coordinates Reverse (-)

17215813 .. 17219411

Gene Structure 3599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G46740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGGCCGCCTTCTCCGTCAACGGGCAGCTTATCCCGACGGCAACAAGCTCCACTGCTTCCACCTCTCTCTCTTCCCGTCGGAAATTTCTCTCTCCTTCCTCGTCTCGTCTCCCTCGCATCTCCACTCAATCTCCTCGTGTCCCATCGATAAAATGCAGCAAAAGCTTACCTAACCGAGATACAGAGACTTCCTCAAAGGATTCTCTCCTTAAAAACCTAGCTAAACCTCTAGCCGTAGCCTCAGTCTCCTCCGCTGCTTCATTCTTTCTGTTCCGAATCTCGAATCTTCCGTCGGTTCTGACCGGTGGTGGAGGAGGAGGAGATGGGAATTTCGGTGGATTTGGTGGTGGAGGTGGTGGTGGAGATGGAAATGATGGTGGATTTTGGGGGAAATTGTTTTCTCCTTCACCAGCGGTTGCTGATGAAGAACAATCACCGGATTGGGATTCTCATGGTTTACCGGCGAATATCGTTGTGCAATTGAACAAGCTTAGTGGTTTCAAGAAGTATAAGGTATCTGATATTATGTTCTTTGATCGACGGAGACAAACCACTATTGGTACTGAAGATTCCTTCTTCGAGATGGTCTCGATTCGTCCTGGTGGAGTTTACACTAAAGCTCAATTGCAGAAGGAGCTTGAAACCCTAGCTACTTGTGGAATGTTTGAGAAAGTTGATTTGGAAGGGAAAACGAAACCTGATGGAACCCTAGGTGTTACAATCTCGTTTGCTGAGAGTACATGGCAATCTGCTGATAGGTTTAGATGTATTAACGTTGGGTTAATGGTACAGTCGAAACCTATTGAGATGGATTCAGATATGACTGATAAAGAGAAGCTTGAGTATTACAGGAGTTTGGAGAAGGATTACAAGAGGAGAATTGATAGGGCACGGCCTTGTTTGTTGCCTGCACCTGTGTATGGTGAGGTTATGCAGATGTTGAGGGATCAAGGGAAAGTGAGTGCTAGGCTGTTGCAGAGGATTAGGGACCGTGTTCAGAAATGGTATCATGATGAAGGGTATGCTTGTGCTCAAGTTGTGAATTTTGGGAATTTGAATACTAAGGAGGTTGTTTGTGAAGTTGTGGAAGGTGATATAACTCAGCTAGTTATTCAGTTTCAAGATAAGCTTGGTAATGTGGTTGAAGGAAATACTCAAGTTCCTGTGGTGCGCAGGGAATTGCCTAAGCAGCTTCGCCAAGGCTATGTTTTCAACATTGAAGCTGGGAAAAAAGCTCTCAGTAACATCAATTCATTGGGGCTGTTCTCTAACATTGAAGTCAATCCACGCCCAGATGAGAAAAATGAAGGGGGCATTATTGTTGAGATCAAGCTTAAGGAGCTAGAACAGAAGTCAGCTGAAGTCAGTACAGAATGGAGTATTGTTCCTGGGCGTGGAGGAGCTCCCACATTGGCTTCATTCCAGCCAGGTGGTTCTGTTACTTTCGAGCATCGAAACCTCCAGGGTCTTAATAGGTCTCTCATGGGTTCAGTGACCACTAGCAACTTCTTGAATCCTCAGGATGATCTTTCGTTTAAGCTTGAGTATGTGCACCCGTATCTGGATGGTGTTTACAATCCTCGGAACCGAACATTCAAAACAAGCTGCTTCAACAGCCGCAAACTTAGCCCAGTATTCACTGGAGGACCTGGTGTTGAGGAAGTGCCACCAATTTGGGTTGACCGAGCTGGTGTGAAAGCTAATATAACTGAGAACTTCACCCGTCAGAGTAAGTTTACATATGGACTTGTGATGGAGGAGATAACAACCCGAGATGAAAGCAGTCACATTGCTGCAAATGGTCAGAGACTACTACCTAGCGGTGGAATCAGTGCTGATGGACCTCCAACAACTCTCAGTGGTACCGGTGTCGATCGAATGGCTTTTCTACAAGCCAACATCACCCGTGACAATACCAAATTTGTTAATGGGGCAGTTGTTGGACAGAGGACTGTCTTTCAGGTTGATCAGGGATTGGGTATTGGGAGCAAATTCCCGTTCTTCAACCGCCACCAGTTAACCATGACAAAATTCATTCAGTTGCGGGAAGTAGAACAAGGGGCTGGTAAGTCACCACCACCAGTTCTAGTCCTCCATGGGCATTACGGAGGCTGCGTTGGCGACCTTCCAAGCTACGATGCTTTTGTCCTCGGTGGTCCGTACTCTGTCCGTGGCTACAACATGGGAGAGCTCGGTGCTGCTAGAAACATTGCCGAGGTCGGTGCTGAGATCAGAATACCCGTGAAGAACACACATGTCTACGCTTTTGTTGAGCATGGAAATGATTTAGGAAGCTCAAAGGATGTGAAGGGAAACCCTACAGCAGTGTACAGGAGAACGGGTCAGGGTTCATCCTATGGTGCAGGTGTGAAACTCGGTTTGGTCCGAGCTGAGTATGCTGTAGATCACAACAATGGAACCGGTGCTCTGTTCTTCCGATTTGGAGAGAGGTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

818

Amino Acids

89.19

Weight (kDa)

8.93

Isoelectric Point (pI)

41.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POTRA1_3_Toc75	PF25282	154 - 245	4.9e-46	Toc75-like, POTRA domain
POTRA2_Toc75	PF25280	254 - 365	3.1e-58	Toc75-like, second POTRA domain
POTRA1_3_Toc75	PF25282	366 - 447	6.5e-35	Toc75-like, POTRA domain
Omp85	PF01103	486 - 805	1.8e-21	Omp85 superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46740 AT4G09080 AT4G09080 AT4G09080
fragaria_vesca	FvH4_3g28760 FvH4_3g28760 FvH4_3g28760 FvH4_5g29410
malus_domestica	MD03G1086500.v1.1 MD11G1095600.v1.1
prunus_persica	Prupe.6G071100_v2.0.a1
pyrus_communis	pycom03g06860 pycom11g08100 pycom11g08110
rosa_chinensis	RchiOBHm_Chr5g0052291 RchiOBHm_Chr7g0222311
rosa_laevigata	RLG00000002071 RLG00000034828
rosa_multiflora	Rmu_sc0007069.1_g000009 Rmu_sc0028377.1_g000001 Rmu_sc0032875.1_g000001 Rmu_sc0032876.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028120 Rroxscaffold_3G00237120
rosa_rugosa	Rorug05G0273100 Rorug07G0207600
rosa_samantha	Rh5CG382000 Rh5DG371900 Rh7AG349900 Rh7DG346100
rosa_wichuraiana	Rw5G032630 Rw5G032670 Rw7G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2354
Acc16I	TGCGCA	1 cut(s)	1172
Acc36I	ACCTGC	1 cut(s)	2354
Acc65I	GGTACC	1 cut(s)	1862
AccB1I	GGYRCC	1 cut(s)	1862
AccI	GTMKAC	1 cut(s)	2259
AciI	CCGC	7 cut(s)	6, 252, 413, 1618, 1821, 2008, 2044
AclI	AACGTT	1 cut(s)	774
AclWI	GGATC	1 cut(s)	954
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	7 cut(s)	83, 328, 1042, 1051, 1919, 1991, 2030
AcuI	CTGAAG	2 cut(s)	585, 1380
AfaI	GTAC	7 cut(s)	562, 739, 789, 1369, 1864, 2162, 2330
AfiI	CCNNNNNNNGG	5 cut(s)	21, 920, 1394, 1561, 1823
AflII	CTTAAG	1 cut(s)	1334
AflIII	ACRYGT	1 cut(s)	2254
AgeI	ACCGGT	3 cut(s)	302, 1865, 2420
AjnI	CCWGG	5 cut(s)	598, 1387, 1426, 1461, 1648
AjuI	GAANNNNNNNTTGG	4 cut(s)	662, 694, 2363, 2395
Alw21I	GWGCWC	5 cut(s)	1033, 1405, 1554, 2193, 2428
Alw26I	GTCTC	8 cut(s)	108, 113, 179, 250, 538, 592, 1482, 1801
Alw44I	GTGCAC	1 cut(s)	1550
AlwI	GGATC	1 cut(s)	954
Ama87I	CYCGRG	1 cut(s)	1770
AoxI	GGCC	2 cut(s)	3, 893
ApaLI	GTGCAC	1 cut(s)	1550
ApeKI	GCWGC	8 cut(s)	25, 156, 254, 1189, 1605, 1793, 2112, 2198
ApoI	RAATTY	7 cut(s)	83, 328, 1042, 1051, 1919, 1991, 2030
ArsI	GACNNNNNNTTYG	2 cut(s)	275, 307
AsiGI	ACCGGT	3 cut(s)	302, 1865, 2420
Asp718I	GGTACC	1 cut(s)	1862
AspA2I	CCTAGG	1 cut(s)	709
AspLEI	GCGC	1 cut(s)	1173
AspS9I	GGNCC	5 cut(s)	988, 1646, 1841, 2156, 2383
AsuHPI	GGTGA	7 cut(s)	399, 426, 935, 1103, 1711, 1894, 2064
AvaI	CYCGRG	1 cut(s)	1770
AvaII	GGWCC	5 cut(s)	988, 1646, 1841, 2156, 2383
AvrII	CCTAGG	1 cut(s)	709
AxyI	CCTNAGG	1 cut(s)	1518
BaeGI	GKGCMC	2 cut(s)	892, 1554
BaeI	ACNNNNGTAYC	2 cut(s)	1854, 1887
BanI	GGYRCC	1 cut(s)	1862
BanII	GRGCYC	2 cut(s)	1405, 2193
BauI	CACGAG	1 cut(s)	135
Bbv12I	GWGCWC	5 cut(s)	1033, 1405, 1554, 2193, 2428
BbvI	GCAGC	8 cut(s)	37, 168, 241, 1201, 1592, 1780, 2099, 2185
BceAI	ACGGC	3 cut(s)	54, 218, 908
BcgI	CGANNNNNNTGC	2 cut(s)	2204, 2238
BciT130I	CCWGG	5 cut(s)	600, 1389, 1428, 1463, 1650
BclI	TGATCA	1 cut(s)	1966
BcoDI	GTCTC	8 cut(s)	108, 113, 179, 250, 538, 592, 1482, 1801
BfmI	CTRYAG	2 cut(s)	2319, 2400
BfrI	CTTAAG	1 cut(s)	1334
BfuAI	ACCTGC	1 cut(s)	2354
BlnI	CCTAGG	1 cut(s)	709
Bme1390I	CCNGG	5 cut(s)	600, 1389, 1428, 1463, 1650
Bme18I	GGWCC	5 cut(s)	988, 1646, 1841, 2156, 2383
BmeT110I	CYCGRG	1 cut(s)	1770
BmgT120I	GGNCC	5 cut(s)	988, 1646, 1841, 2156, 2383
BmiI	GGNNCC	5 cut(s)	706, 989, 1586, 1864, 2419
BmrFI	CCNGG	5 cut(s)	600, 1389, 1428, 1463, 1650
BmrI	ACTGGG	1 cut(s)	1625
BmsI	GCATC	3 cut(s)	126, 1459, 2128
BmuI	ACTGGG	1 cut(s)	1625
BplI	GAGNNNNNCTC	4 cut(s)	176, 208, 572, 604
BpmI	CTGGAG	2 cut(s)	1445, 1662
Bpu10I	CCTNAGC	1 cut(s)	1185
BpuEI	CTTGAG	4 cut(s)	860, 1017, 1140, 1562
Bsa29I	ATCGAT	1 cut(s)	146
BsaI	GGTCTC	2 cut(s)	592, 1482
BsaJI	CCNNGG	9 cut(s)	709, 1198, 1388, 1462, 1580, 2095, 2149, 2170, 2214
BsaWI	WCCGGW	4 cut(s)	302, 436, 1865, 2420
BsaXI	ACNNNNNCTCC	6 cut(s)	115, 145, 2100, 2130, 2326, 2356
Bsc4I	CCNNNNNNNGG	5 cut(s)	21, 920, 1394, 1561, 1823
Bse118I	RCCGGY	4 cut(s)	302, 460, 1865, 2420
Bse1I	ACTGG	4 cut(s)	1631, 1645, 2014, 2081
Bse21I	CCTNAGG	1 cut(s)	1518
Bse3DI	GCAATG	2 cut(s)	1788, 2208
BseBI	CCWGG	5 cut(s)	600, 1389, 1428, 1463, 1650
BseCI	ATCGAT	1 cut(s)	146
BseDI	CCNNGG	9 cut(s)	709, 1198, 1388, 1462, 1580, 2095, 2149, 2170, 2214
BseGI	GGATG	4 cut(s)	1528, 1570, 2308, 2351
BseLI	CCNNNNNNNGG	5 cut(s)	21, 920, 1394, 1561, 1823
BseMI	GCAATG	2 cut(s)	1788, 2208
BseMII	CTCAG	9 cut(s)	255, 723, 1115, 1252, 1532, 1701, 1870, 2217, 2382
BseNI	ACTGG	4 cut(s)	1631, 1645, 2014, 2081
BseRI	GAGGAG	8 cut(s)	123, 238, 327, 330, 333, 889, 1413, 1772
BseSI	GKGCMC	2 cut(s)	892, 1554
BseXI	GCAGC	8 cut(s)	37, 168, 241, 1201, 1592, 1780, 2099, 2185
BseYI	CCCAGC	1 cut(s)	1223
BsgI	GTGCAG	2 cut(s)	894, 2382
Bsh1285I	CGRYCG	1 cut(s)	1876
BshFI	GGCC	2 cut(s)	5, 895
BshNI	GGYRCC	1 cut(s)	1862
BshTI	ACCGGT	3 cut(s)	302, 1865, 2420
BshVI	ATCGAT	1 cut(s)	146
BsiEI	CGRYCG	1 cut(s)	1876
BsiHKAI	GWGCWC	5 cut(s)	1033, 1405, 1554, 2193, 2428
BsiHKCI	CYCGRG	1 cut(s)	1770
BsiSI	CCGG	5 cut(s)	303, 437, 461, 1866, 2421
BslFI	GGGAC	2 cut(s)	125, 1001
BslI	CCNNNNNNNGG	5 cut(s)	21, 920, 1394, 1561, 1823
BsmAI	GTCTC	8 cut(s)	108, 113, 179, 250, 538, 592, 1482, 1801
BsmBI	CGTCTC	2 cut(s)	108, 113
BsmFI	GGGAC	2 cut(s)	125, 1001
BsnI	GGCC	2 cut(s)	5, 895
Bso31I	GGTCTC	2 cut(s)	592, 1482
BsoBI	CYCGRG	1 cut(s)	1770
Bsp1286I	GDGCHC	6 cut(s)	892, 1033, 1405, 1554, 2193, 2428
Bsp1407I	TGTACA	1 cut(s)	2328
Bsp143I	GATC	8 cut(s)	535, 946, 1326, 1525, 1873, 1966, 2229, 2404
Bsp19I	CCATGG	1 cut(s)	2095
BspACI	CCGC	7 cut(s)	6, 252, 413, 1618, 1821, 2008, 2044
BspANI	GGCC	2 cut(s)	5, 895
BspCNI	CTCAG	9 cut(s)	254, 724, 1114, 1251, 1531, 1702, 1869, 2218, 2383
BspDI	ATCGAT	1 cut(s)	146
BspHI	TCATGA	1 cut(s)	1009
BspLI	GGNNCC	5 cut(s)	706, 989, 1586, 1864, 2419
BspMI	ACCTGC	1 cut(s)	2354
BspPI	GGATC	1 cut(s)	954
BspT107I	GGYRCC	1 cut(s)	1862
BspTI	CTTAAG	1 cut(s)	1334
BspTNI	GGTCTC	2 cut(s)	592, 1482
BsrDI	GCAATG	2 cut(s)	1788, 2208
BsrFI	RCCGGY	4 cut(s)	302, 460, 1865, 2420
BsrGI	TGTACA	1 cut(s)	2328
BsrI	ACTGG	4 cut(s)	1631, 1645, 2014, 2081
BssAI	RCCGGY	4 cut(s)	302, 460, 1865, 2420
BssECI	CCNNGG	9 cut(s)	709, 1198, 1388, 1462, 1580, 2095, 2149, 2170, 2214
BssMI	GATC	8 cut(s)	535, 946, 1326, 1525, 1873, 1966, 2229, 2404
BssSI	CACGAG	1 cut(s)	135
BssT1I	CCWWGG	3 cut(s)	709, 1198, 2095
Bst2BI	CACGAG	1 cut(s)	135
Bst2UI	CCWGG	5 cut(s)	600, 1389, 1428, 1463, 1650
Bst4CI	ACNGT	3 cut(s)	792, 992, 1954
Bst6I	CTCTTC	1 cut(s)	76
BstAFI	CTTAAG	1 cut(s)	1334
BstAUI	TGTACA	1 cut(s)	2328
BstC8I	GCNNGC	1 cut(s)	909
BstDSI	CCRYGG	2 cut(s)	2095, 2170
BstF5I	GGATG	4 cut(s)	1528, 1570, 2308, 2351
BstHHI	GCGC	1 cut(s)	1173
BstKTI	GATC	8 cut(s)	538, 949, 1329, 1528, 1876, 1969, 2232, 2407
BstMAI	GTCTC	8 cut(s)	108, 113, 179, 250, 538, 592, 1482, 1801
BstMBI	GATC	8 cut(s)	535, 946, 1326, 1525, 1873, 1966, 2229, 2404
BstMCI	CGRYCG	1 cut(s)	1876
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 634, 1189, 1339, 1614, 1626, 2118, 2396
BstNI	CCWGG	5 cut(s)	600, 1389, 1428, 1463, 1650
BstNSI	RCATGY	1 cut(s)	2258
BstSCI	CCNGG	5 cut(s)	598, 1387, 1426, 1461, 1648
BstSFI	CTRYAG	2 cut(s)	2319, 2400
BstSLI	GKGCMC	2 cut(s)	892, 1554
BstV1I	GCAGC	8 cut(s)	37, 168, 241, 1201, 1592, 1780, 2099, 2185
BstXI	CCANNNNNNTGG	2 cut(s)	1430, 1674
Bsu15I	ATCGAT	1 cut(s)	146
Bsu36I	CCTNAGG	1 cut(s)	1518
BsuRI	GGCC	2 cut(s)	5, 895
BsuTUI	ATCGAT	1 cut(s)	146
BtgI	CCRYGG	2 cut(s)	2095, 2170
BtsCI	GGATG	4 cut(s)	1528, 1570, 2308, 2351
BtsI	GCAGTG	2 cut(s)	51, 2331
BtsIMutI	CAGTG	6 cut(s)	51, 1497, 1638, 1837, 1864, 2331
BveI	ACCTGC	1 cut(s)	2354
Cac8I	GCNNGC	1 cut(s)	909
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	1 cut(s)	1173
Cfr10I	RCCGGY	4 cut(s)	302, 460, 1865, 2420
Cfr13I	GGNCC	5 cut(s)	988, 1646, 1841, 2156, 2383
ClaI	ATCGAT	1 cut(s)	146
CsiI	ACCWGGT	1 cut(s)	1648
Csp6I	GTAC	7 cut(s)	561, 738, 788, 1368, 1863, 2161, 2329
CspAI	ACCGGT	3 cut(s)	302, 1865, 2420
CspCI	CAANNNNNGTGG	2 cut(s)	475, 510
CviAII	CATG	9 cut(s)	452, 741, 1010, 1483, 2023, 2096, 2182, 2255, 2276
CviQI	GTAC	7 cut(s)	561, 738, 788, 1368, 1863, 2161, 2329
DpnI	GATC	8 cut(s)	537, 948, 1328, 1527, 1875, 1968, 2231, 2406
DpnII	GATC	8 cut(s)	535, 946, 1326, 1525, 1873, 1966, 2229, 2404
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	76
EarI	CTCTTC	1 cut(s)	76
Ecl136II	GAGCTC	2 cut(s)	1403, 2191
Eco130I	CCWWGG	3 cut(s)	709, 1198, 2095
Eco24I	GRGCYC	2 cut(s)	1405, 2193
Eco31I	GGTCTC	2 cut(s)	592, 1482
Eco47I	GGWCC	5 cut(s)	988, 1646, 1841, 2156, 2383
Eco53kI	GAGCTC	2 cut(s)	1403, 2191
Eco57I	CTGAAG	2 cut(s)	585, 1380
Eco81I	CCTNAGG	1 cut(s)	1518
Eco88I	CYCGRG	1 cut(s)	1770
EcoICRI	GAGCTC	2 cut(s)	1403, 2191
EcoO109I	RGGNCCY	1 cut(s)	1646
EcoRII	CCWGG	5 cut(s)	598, 1387, 1426, 1461, 1648
EcoT14I	CCWWGG	3 cut(s)	709, 1198, 2095
EcoT38I	GRGCYC	2 cut(s)	1405, 2193
ErhI	CCWWGG	3 cut(s)	709, 1198, 2095
Esp3I	CGTCTC	2 cut(s)	108, 113
FaeI	CATG	9 cut(s)	455, 744, 1013, 1486, 2026, 2099, 2185, 2258, 2279
FalI	AAGNNNNNCTT	4 cut(s)	822, 854, 1113, 1145
FaqI	GGGAC	2 cut(s)	125, 1001
FatI	CATG	9 cut(s)	451, 740, 1009, 1482, 2022, 2095, 2181, 2254, 2275
FauI	CCCGC	1 cut(s)	2037
FauNDI	CATATG	1 cut(s)	1741
FbaI	TGATCA	1 cut(s)	1966
FblI	GTMKAC	1 cut(s)	2259
FokI	GGATG	4 cut(s)	1535, 1577, 2315, 2338
FriOI	GRGCYC	2 cut(s)	1405, 2193
FspI	TGCGCA	1 cut(s)	1172
GlaI	GCGC	1 cut(s)	1172
GsaI	CCCAGC	1 cut(s)	1227
GsuI	CTGGAG	2 cut(s)	1445, 1662
HaeIII	GGCC	2 cut(s)	5, 895
HapII	CCGG	5 cut(s)	303, 437, 461, 1866, 2421
HhaI	GCGC	1 cut(s)	1173
Hin1II	CATG	9 cut(s)	455, 744, 1013, 1486, 2026, 2099, 2185, 2258, 2279
Hin6I	GCGC	1 cut(s)	1171
HinP1I	GCGC	1 cut(s)	1171
HincII	GTYRAC	3 cut(s)	19, 1681, 2019
HindII	GTYRAC	3 cut(s)	19, 1681, 2019
HindIII	AAGCTT	6 cut(s)	163, 488, 836, 1127, 1331, 1538
HinfI	GANTC	9 cut(s)	200, 276, 283, 446, 569, 592, 812, 1513, 1827
HpaI	GTTAAC	1 cut(s)	2019
HpaII	CCGG	5 cut(s)	303, 437, 461, 1866, 2421
HphI	GGTGA	7 cut(s)	399, 426, 935, 1103, 1711, 1894, 2064
Hpy99I	CGWCG	4 cut(s)	40, 81, 295, 543
HpyCH4III	ACNGT	3 cut(s)	792, 992, 1954
HpyCH4IV	ACGT	1 cut(s)	774
HpyCH4V	TGCA	9 cut(s)	156, 478, 628, 911, 934, 976, 1552, 1796, 2363
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 634, 1189, 1339, 1614, 1626, 2118, 2396
HpySE526I	ACGT	1 cut(s)	774
Hsp92II	CATG	9 cut(s)	455, 744, 1013, 1486, 2026, 2099, 2185, 2258, 2279
HspAI	GCGC	1 cut(s)	1171
KpnI	GGTACC	1 cut(s)	1866
Ksp22I	TGATCA	1 cut(s)	1966
KspAI	GTTAAC	1 cut(s)	2019
Kzo9I	GATC	8 cut(s)	535, 946, 1326, 1525, 1873, 1966, 2229, 2404
LmnI	GCTCC	6 cut(s)	53, 634, 1339, 1400, 1408, 1986
Lsp1109I	GCAGC	8 cut(s)	37, 168, 241, 1201, 1592, 1780, 2099, 2185
LweI	GCATC	3 cut(s)	126, 1459, 2128
MabI	ACCWGGT	1 cut(s)	1648
MaeII	ACGT	1 cut(s)	774
MaeIII	GTNAC	7 cut(s)	715, 1241, 1438, 1492, 1784, 1907, 2070
MalI	GATC	8 cut(s)	537, 948, 1328, 1527, 1875, 1968, 2231, 2406
MboI	GATC	8 cut(s)	535, 946, 1326, 1525, 1873, 1966, 2229, 2404
MboII	GAAGA	8 cut(s)	63, 278, 437, 568, 578, 1993, 2257, 2425
MfeI	CAATTG	2 cut(s)	479, 623
MhlI	GDGCHC	6 cut(s)	892, 1033, 1405, 1554, 2193, 2428
MmeI	TCCRAC	3 cut(s)	59, 1871, 1921
MseI	TTAA	9 cut(s)	210, 771, 782, 1335, 1470, 1536, 1926, 2018, 2455
MslI	CAYNNNNRTG	2 cut(s)	2280, 2412
MspA1I	CMGCKG	3 cut(s)	254, 413, 1358
MspCI	CTTAAG	1 cut(s)	1334
MspI	CCGG	5 cut(s)	303, 437, 461, 1866, 2421
MspR9I	CCNGG	5 cut(s)	600, 1389, 1428, 1463, 1650
MunI	CAATTG	2 cut(s)	479, 623
MvaI	CCWGG	5 cut(s)	600, 1389, 1428, 1463, 1650
MwoI	GCNNNNNNNGC	8 cut(s)	162, 634, 1189, 1339, 1614, 1626, 2118, 2396
NcoI	CCATGG	1 cut(s)	2095
NdeI	CATATG	1 cut(s)	1741
NdeII	GATC	8 cut(s)	535, 946, 1326, 1525, 1873, 1966, 2229, 2404
NlaIII	CATG	9 cut(s)	455, 744, 1013, 1486, 2026, 2099, 2185, 2258, 2279
NlaIV	GGNNCC	5 cut(s)	706, 989, 1586, 1864, 2419
NmeAIII	GCCGAG	1 cut(s)	2239
NmuCI	GTSAC	4 cut(s)	1492, 1784, 1907, 2070
NsbI	TGCGCA	1 cut(s)	1172
NspI	RCATGY	1 cut(s)	2258
PagI	TCATGA	1 cut(s)	1009
PaqCI	CACCTGC	1 cut(s)	2354
PciI	ACATGT	1 cut(s)	2254
PcsI	WCGNNNNNNNCGW	2 cut(s)	287, 2112
PfeI	GAWTC	9 cut(s)	200, 276, 283, 446, 569, 592, 812, 1513, 1827
PinAI	ACCGGT	3 cut(s)	302, 1865, 2420
Ple19I	CGATCG	1 cut(s)	1876
PpuMI	RGGWCCY	1 cut(s)	1646
PscI	ACATGT	1 cut(s)	2254
Psp124BI	GAGCTC	2 cut(s)	1405, 2193
Psp1406I	AACGTT	1 cut(s)	774
Psp5II	RGGWCCY	1 cut(s)	1646
Psp6I	CCWGG	5 cut(s)	598, 1387, 1426, 1461, 1648
PspFI	CCCAGC	1 cut(s)	1223
PspGI	CCWGG	5 cut(s)	598, 1387, 1426, 1461, 1648
PspN4I	GGNNCC	5 cut(s)	706, 989, 1586, 1864, 2419
PspPI	GGNCC	5 cut(s)	988, 1646, 1841, 2156, 2383
PspPPI	RGGWCCY	1 cut(s)	1646
PvuI	CGATCG	1 cut(s)	1876
PvuII	CAGCTG	1 cut(s)	1358
RsaI	GTAC	7 cut(s)	562, 739, 789, 1369, 1864, 2162, 2330
RsaNI	GTAC	7 cut(s)	561, 738, 788, 1368, 1863, 2161, 2329
RseI	CAYNNNNRTG	2 cut(s)	2280, 2412
SacI	GAGCTC	2 cut(s)	1405, 2193
SaqAI	TTAA	9 cut(s)	210, 771, 782, 1335, 1470, 1536, 1926, 2018, 2455
Sau3AI	GATC	8 cut(s)	535, 946, 1326, 1525, 1873, 1966, 2229, 2404
Sau96I	GGNCC	5 cut(s)	988, 1646, 1841, 2156, 2383
ScrFI	CCNGG	5 cut(s)	600, 1389, 1428, 1463, 1650
SduI	GDGCHC	6 cut(s)	892, 1033, 1405, 1554, 2193, 2428
SexAI	ACCWGGT	1 cut(s)	1648
SfaNI	GCATC	3 cut(s)	126, 1459, 2128
SfcI	CTRYAG	2 cut(s)	2319, 2400
SinI	GGWCC	5 cut(s)	988, 1646, 1841, 2156, 2383
SmiMI	CAYNNNNRTG	2 cut(s)	2280, 2412
SmlI	CTYRAG	5 cut(s)	839, 1032, 1155, 1334, 1541
SmoI	CTYRAG	5 cut(s)	839, 1032, 1155, 1334, 1541
SsiI	CCGC	7 cut(s)	6, 252, 413, 1618, 1821, 2008, 2044
SstI	GAGCTC	2 cut(s)	1405, 2193
StyD4I	CCNGG	5 cut(s)	598, 1387, 1426, 1461, 1648
StyI	CCWWGG	3 cut(s)	709, 1198, 2095
TaaI	ACNGT	3 cut(s)	792, 992, 1954
TaiI	ACGT	1 cut(s)	777
TaqII	GACCGA	1 cut(s)	1698
TatI	WGTACW	3 cut(s)	737, 1367, 2328
TauI	GCSGC	2 cut(s)	8, 1620
TfiI	GAWTC	9 cut(s)	200, 276, 283, 446, 569, 592, 812, 1513, 1827
Tru1I	TTAA	9 cut(s)	210, 771, 782, 1335, 1470, 1536, 1926, 2018, 2455
Tru9I	TTAA	9 cut(s)	210, 771, 782, 1335, 1470, 1536, 1926, 2018, 2455
TscAI	CASTG	6 cut(s)	58, 1497, 1645, 1837, 1864, 2331
TseFI	GTSAC	4 cut(s)	1492, 1784, 1907, 2070
TseI	GCWGC	8 cut(s)	25, 156, 254, 1189, 1605, 1793, 2112, 2198
Tsp45I	GTSAC	4 cut(s)	1492, 1784, 1907, 2070
TspDTI	ATGAA	9 cut(s)	249, 438, 1029, 1242, 1320, 1407, 1791, 2023, 2340
TspGWI	ACGGA	6 cut(s)	4, 279, 556, 2121, 2148, 2159
TspRI	CASTG	6 cut(s)	58, 1497, 1645, 1837, 1864, 2331
Vha464I	CTTAAG	1 cut(s)	1334
VneI	GTGCAC	1 cut(s)	1550
VpaK11BI	GGWCC	5 cut(s)	988, 1646, 1841, 2156, 2383
XapI	RAATTY	7 cut(s)	83, 328, 1042, 1051, 1919, 1991, 2030
XceI	RCATGY	1 cut(s)	2258
XmaJI	CCTAGG	1 cut(s)	709
XmiI	GTMKAC	1 cut(s)	2259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.