Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004162

Physical Location & Seq

Genomic Coordinates Forward (+)

21741199 .. 21746852

Gene Structure 5654 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g28760.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGCTCGCCGTAGCGCCAACCACCACTTACCTCACCGTCCCCACCACCCTCCGCCGTCCCTCCTCCGCTCCCAAGCTACCCTATCTACCCTCCGTCGCCAACACCCGCGCCCGCCGCCGTCAACTCGCCCAATGCCGCGTGTCTTGCTCTTCCTCCTCCTCCTCCTCTTCGCCTCTTTCTCTAAACCCTAACCCTTCCTCTTCCCACAACCTCCTCCAAAACCTCGCCAAAATCCTCGCCGGCGCCACCACCGTCACCCTCGTCCTCAACCTAAGCAAATCCCCCGCCTTTAACGGCAGAGGCGGAAGTTCGGGCGGCGGAGGAGGAGGAGGAGGTCATGGCTCCAACGGCGGCGGCGGAGGGTTTTGGAGGAGGCTGTTAGGGCTGCATGCGGCAATAGCGGACGAGCCGAACGACGAGTCGTGGGATTCTCACGGCTTGCCGGCCAACATTGTCGTCCAGCTCAGCCGGCTCAGCGGCTTCAAGAAGTACAAGGCCTCGGAGATTGTGCTCTTCGACCGGAGGCAGCGGAGCGCCGTCGGCGCCGACGACCCGTTCTACATGTATCTAACCCTCCGGCCCGGCGGCGTCTACACCAAGGCGGAGCTCCAGAGCGAGCTTGAATCCCTAGCCAATTCCCGAATGTTCGACAAGGTTGAGTTGGAAGGCAAGACCAACCGGGACGGCACCCTCGCCGTCAGCGTCTCCTTCACCGAGAGCATATGGCTGGCGGCGGACAGGTTCCGGTGCATCAACGTGGGCCTGATGGGCCAGGTCAAGCCCATTGAGATGGACCCGGATATGACAGATAGGGAGAAGCTGCAGCAGTTGAGGAACCAAGATAGGGAGTACAAGAGGAGGATGGAGAAGGCCAGGCCGTGTATGATGCCGGCTTCGGTGCAGAGGGAGGTGGTGCAGATGGTGAGGGAACATGGGAAGGTGACTAGTAGATTGTTGCAGAAGGTTCGAGACCGGGTTCAGAAATGGTACCAAGATGAGGGGTATGTGTGGGCTAGTGTTGTTAACTTTGGGAATTTGAATACAAAGGAGATTGTGTGTGAGGTGATGGAAGGTGATATTACAAAGCTGGTTGTTCAGTTCAAGGATAAGCTTGGCAATGTTGTTGAAGGGAAGACTCAGGGTCTTGTGGTCAAGAGAGAATTGCCCAAACAGCTTCGACCAGGTAATGTGTTTAACATAGAAGCAGGGAAGCAAGCTCTGAGGAACTTAAACTCCTTGGGATTGTTTTCAAACATTGAAGTGAATCCAGTAGCGGATGAGAAGAATGAAGGAGGGGTAATTGTTGAAATAAATCTTAAAGAACATGAACACAAGACTGCAGATGTAAGCACAGAGTGGAACATTGTTTGTGGACATGGAGGCTATCCCACTTTGGCTTCACTACTACCTGGTGGAACTGTTACATTTCAACATCAGAATCTTAACGGGTTGAATAGGTCTCTTATTGGTTCAGTTAAAACTAATAACCTCTTTAACCCTCAGGATAATCTTGAGTTTAAGCTTGAGTATGTGCATCCATATCTGGATGGTGTGGACAATCCCCGCGATCGAACTCTCCGCGTAAGCTGCTTCAATGATCAAAAACCGAGTCCAGTCTTTACTGGTGGGCCAGGGGACGATGAAGTTCCCCCTGTAATGGTTGATCGAGCTGGCATCAAGGCTAATATAACAGAGAATTTGAGCCGTCAGAGCAAATTCACTTATGGCCTTGTGATGGAAGAGATAACCACACGTGATGAACAAAACCATATACTTTCAAATGGTCAAAGAGTGTTGCCCAGTGGAGGTGTTAGTGAAGATGGACCTCCAACAACTCTCAGTGGTACCGGCATTGACCATGTGGCATTTTTACAGTCAAATATCACACGTGATAACACCAAGTTTGTGAATGGAACCTTAGTTGGTCAGAGGAATGTGTTTCAGGTTGACCAAGGCCTTGGTATTGGCAGCAAGTTTCCATTCTTCAACCGCCACCAGTTATCATTAACAAGATTTTTCCAGCTGAAGGAAGTGGAGGAAGGTGCTGGAAAACCACCACCACCTGTGCTTGTACTTCATGGTCACTATGGTGTCTGTGTTGGAGACCTTCCAAGTTATGATGCATTTACCCTTGGGGGTCCATATTCTGTGCGAGGTTACAACATGGGTGAGATTGGCGCCGCTAGACAGATCCTCGAGCTTGCAGCTGAGCTGCGCATACCAGTTAAAGGTAAAAATGTATATGCATTTGTAGAACATGGCAATGATCTCGGAAGTTCAAAGGATGTCAAGGGTAACCCAACCGAGGTATACAGGCGAGTGGGTCACGGGTCATCATATGGTGTTGGTGTCAAGTTAGGTCAAGTAAGAGTGGAGTATGCTGTGGATCACAACTCTGGCACAGGCTCAACATTCATCCGATTTGGTGAGCGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

813

Amino Acids

88.92

Weight (kDa)

8.96

Isoelectric Point (pI)

45.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POTRA1_3_Toc75	PF25282	148 - 239	8.9e-25	Toc75-like, POTRA domain
POTRA2_Toc75	PF25280	248 - 359	1.3e-53	Toc75-like, second POTRA domain
POTRA1_3_Toc75	PF25282	360 - 441	1.4e-25	Toc75-like, POTRA domain
Omp85	PF01103	480 - 795	8.1e-21	Omp85 superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46740 AT4G09080 AT4G09080 AT4G09080
fragaria_vesca	FvH4_3g28760 FvH4_3g28760 FvH4_3g28760 FvH4_5g29410
malus_domestica	MD03G1086500.v1.1 MD11G1095600.v1.1
prunus_persica	Prupe.6G071100_v2.0.a1
pyrus_communis	pycom03g06860 pycom11g08100 pycom11g08110
rosa_chinensis	RchiOBHm_Chr5g0052291 RchiOBHm_Chr7g0222311
rosa_laevigata	RLG00000002071 RLG00000034828
rosa_multiflora	Rmu_sc0007069.1_g000009 Rmu_sc0028377.1_g000001 Rmu_sc0032875.1_g000001 Rmu_sc0032876.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028120 Rroxscaffold_3G00237120
rosa_rugosa	Rorug05G0273100 Rorug07G0207600
rosa_samantha	Rh5CG382000 Rh5DG371900 Rh7AG349900 Rh7DG346100
rosa_wichuraiana	Rw5G032630 Rw5G032670 Rw7G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2216
Acc65I	GGTACC	2 cut(s)	987, 1844
AccB1I	GGYRCC	6 cut(s)	242, 542, 686, 987, 1844, 2177
AccBSI	CCGCTC	1 cut(s)	68
AccI	GTMKAC	2 cut(s)	591, 2310
AccII	CGCG	4 cut(s)	108, 138, 1566, 1581
AclWI	GGATC	2 cut(s)	2185, 2394
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	3 cut(s)	1033, 1696, 1715
AcuI	CTGAAG	1 cut(s)	2045
AcvI	CACGTG	2 cut(s)	1754, 1889
AcyI	GRCGYC	4 cut(s)	243, 543, 588, 2178
AdeI	CACNNNGTG	1 cut(s)	1356
AfaI	GTAC	5 cut(s)	491, 851, 989, 1846, 2073
AfiI	CCNNNNNNNGG	8 cut(s)	844, 997, 1657, 1735, 1805, 2026, 2228, 2305
AflIII	ACRYGT	3 cut(s)	561, 1751, 1886
AhdI	GACNNNNNGTC	1 cut(s)	1140
AhlI	ACTAGT	1 cut(s)	944
AjnI	CCWGG	5 cut(s)	771, 872, 1180, 1408, 1630
AleI	CACNNNNGTG	1 cut(s)	2088
AloI	GAACNNNNNNTCC	2 cut(s)	1217, 1249
Alw21I	GWGCWC	2 cut(s)	513, 609
Alw26I	GTCTC	4 cut(s)	709, 963, 1464, 2097
AlwI	GGATC	2 cut(s)	2185, 2394
Ama87I	CYCGRG	1 cut(s)	2195
ApeKI	GCWGC	8 cut(s)	385, 526, 820, 823, 1587, 1968, 2204, 2212
ApoI	RAATTY	3 cut(s)	1033, 1696, 1715
ArsI	GACNNNNNNTTYG	4 cut(s)	404, 436, 1594, 1626
Asp718I	GGTACC	2 cut(s)	987, 1844
AspLEI	GCGC	7 cut(s)	16, 110, 245, 536, 545, 2180, 2217
AspS9I	GGNCC	7 cut(s)	579, 760, 769, 793, 1628, 1823, 2138
AsuC2I	CCSGG	4 cut(s)	582, 680, 797, 974
AsuHPI	GGTGA	9 cut(s)	25, 247, 703, 934, 952, 1075, 1085, 2180, 2438
AvaI	CYCGRG	1 cut(s)	2195
AvaII	GGWCC	3 cut(s)	793, 1823, 2138
AxyI	CCTNAGG	1 cut(s)	1500
BanI	GGYRCC	6 cut(s)	242, 542, 686, 987, 1844, 2177
BanII	GRGCYC	1 cut(s)	609
BbrPI	CACGTG	2 cut(s)	1754, 1889
BbsI	GAAGAC	1 cut(s)	1139
Bbv12I	GWGCWC	2 cut(s)	513, 609
BbvI	GCAGC	8 cut(s)	372, 538, 807, 835, 1574, 1980, 2199, 2216
BccI	CCATC	8 cut(s)	760, 784, 856, 913, 1060, 1541, 1729, 1814
BcgI	CGANNNNNNTGC	4 cut(s)	947, 981, 2251, 2285
BciT130I	CCWGG	5 cut(s)	773, 874, 1182, 1410, 1632
BclI	TGATCA	1 cut(s)	1597
BcnI	CCSGG	4 cut(s)	582, 680, 797, 974
BcoDI	GTCTC	4 cut(s)	709, 963, 1464, 2097
BcuI	ACTAGT	1 cut(s)	944
BfaI	CTAG	4 cut(s)	629, 945, 1014, 2184
BfmI	CTRYAG	2 cut(s)	821, 1338
BfoI	RGCGCY	5 cut(s)	17, 246, 537, 546, 2181
BglI	GCCNNNNNGGC	1 cut(s)	768
BlpI	GCTNAGC	3 cut(s)	464, 473, 2208
Bme1390I	CCNGG	9 cut(s)	582, 680, 773, 797, 874, 974, 1182, 1410, 1632
Bme18I	GGWCC	3 cut(s)	793, 1823, 2138
BmeRI	GACNNNNNGTC	1 cut(s)	1140
BmeT110I	CYCGRG	1 cut(s)	2195
BmgT120I	GGNCC	7 cut(s)	579, 760, 769, 793, 1628, 1823, 2138
BmrFI	CCNGG	9 cut(s)	582, 680, 773, 797, 874, 974, 1182, 1410, 1632
BmrI	ACTGGG	1 cut(s)	1794
BmsI	GCATC	5 cut(s)	759, 876, 1543, 1683, 2110
BmuI	ACTGGG	1 cut(s)	1794
BpiI	GAAGAC	1 cut(s)	1139
BpmI	CTGGAG	1 cut(s)	593
Bpu10I	CCTNAGC	1 cut(s)	272
Bpu1102I	GCTNAGC	3 cut(s)	464, 473, 2208
BpuEI	CTTGAG	2 cut(s)	1532, 1544
BpuMI	CCSGG	4 cut(s)	582, 680, 797, 974
BsaAI	YACGTR	2 cut(s)	1754, 1889
BsaHI	GRCGYC	4 cut(s)	243, 543, 588, 2178
BsaI	GGTCTC	3 cut(s)	963, 1464, 2097
BsaJI	CCNNGG	8 cut(s)	498, 597, 1236, 1631, 1951, 1957, 2131, 2304
BsaWI	WCCGGW	2 cut(s)	519, 744
BsaXI	ACNNNNNCTCC	4 cut(s)	1040, 1070, 1217, 1247
Bsc4I	CCNNNNNNNGG	8 cut(s)	844, 997, 1657, 1735, 1805, 2026, 2228, 2305
Bse118I	RCCGGY	5 cut(s)	239, 442, 468, 889, 1847
Bse1I	ACTGG	6 cut(s)	1268, 1613, 1627, 1800, 1996, 2222
Bse21I	CCTNAGG	1 cut(s)	1500
Bse3DI	GCAATG	2 cut(s)	1123, 2269
BseBI	CCWGG	5 cut(s)	773, 874, 1182, 1410, 1632
BseDI	CCNNGG	8 cut(s)	498, 597, 1236, 1631, 1951, 1957, 2131, 2304
BseGI	GGATG	6 cut(s)	867, 1282, 1534, 1552, 2290, 2415
BseLI	CCNNNNNNNGG	8 cut(s)	844, 997, 1657, 1735, 1805, 2026, 2228, 2305
BseMI	GCAATG	2 cut(s)	1123, 2269
BseMII	CTCAG	7 cut(s)	478, 487, 1151, 1211, 1514, 1852, 2199
BseNI	ACTGG	6 cut(s)	1268, 1613, 1627, 1800, 1996, 2222
BseXI	GCAGC	8 cut(s)	372, 538, 807, 835, 1574, 1980, 2199, 2216
BsgI	GTGCAG	2 cut(s)	920, 935
Bsh1236I	CGCG	4 cut(s)	108, 138, 1566, 1581
Bsh1285I	CGRYCG	2 cut(s)	520, 1570
BshNI	GGYRCC	6 cut(s)	242, 542, 686, 987, 1844, 2177
BsiEI	CGRYCG	2 cut(s)	520, 1570
BsiHKAI	GWGCWC	2 cut(s)	513, 609
BsiHKCI	CYCGRG	1 cut(s)	2195
BslFI	GGGAC	4 cut(s)	23, 42, 695, 1649
BslI	CCNNNNNNNGG	8 cut(s)	844, 997, 1657, 1735, 1805, 2026, 2228, 2305
BsmAI	GTCTC	4 cut(s)	709, 963, 1464, 2097
BsmBI	CGTCTC	1 cut(s)	709
BsmFI	GGGAC	4 cut(s)	23, 42, 695, 1649
Bso31I	GGTCTC	3 cut(s)	963, 1464, 2097
BsoBI	CYCGRG	1 cut(s)	2195
Bsp1286I	GDGCHC	2 cut(s)	513, 609
Bsp143I	GATC	6 cut(s)	1567, 1597, 1663, 2190, 2266, 2386
Bsp1720I	GCTNAGC	3 cut(s)	464, 473, 2208
BspCNI	CTCAG	7 cut(s)	477, 486, 1150, 1212, 1513, 1851, 2200
BspFNI	CGCG	4 cut(s)	108, 138, 1566, 1581
BspMAI	CTGCAG	2 cut(s)	825, 1342
BspPI	GGATC	2 cut(s)	2185, 2394
BspQI	GCTCTTC	2 cut(s)	154, 518
BspT107I	GGYRCC	6 cut(s)	242, 542, 686, 987, 1844, 2177
BspTNI	GGTCTC	3 cut(s)	963, 1464, 2097
BsrBI	CCGCTC	1 cut(s)	68
BsrDI	GCAATG	2 cut(s)	1123, 2269
BsrFI	RCCGGY	5 cut(s)	239, 442, 468, 889, 1847
BsrI	ACTGG	6 cut(s)	1268, 1613, 1627, 1800, 1996, 2222
BssAI	RCCGGY	5 cut(s)	239, 442, 468, 889, 1847
BssECI	CCNNGG	8 cut(s)	498, 597, 1236, 1631, 1951, 1957, 2131, 2304
BssMI	GATC	6 cut(s)	1567, 1597, 1663, 2190, 2266, 2386
BssNAI	GTATAC	1 cut(s)	2311
BssNI	GRCGYC	4 cut(s)	243, 543, 588, 2178
BssT1I	CCWWGG	5 cut(s)	597, 1236, 1951, 1957, 2131
Bst1107I	GTATAC	1 cut(s)	2311
Bst2UI	CCWGG	5 cut(s)	773, 874, 1182, 1410, 1632
Bst4CI	ACNGT	4 cut(s)	37, 253, 1420, 1875
Bst6I	CTCTTC	5 cut(s)	154, 172, 205, 518, 1734
BstACI	GRCGYC	4 cut(s)	243, 543, 588, 2178
BstBAI	YACGTR	2 cut(s)	1754, 1889
BstDEI	CTNAG	9 cut(s)	272, 464, 473, 1137, 1220, 1500, 1838, 1918, 2208
BstEII	GGTNACC	1 cut(s)	2294
BstF5I	GGATG	6 cut(s)	867, 1282, 1534, 1552, 2290, 2415
BstFNI	CGCG	4 cut(s)	108, 138, 1566, 1581
BstH2I	RGCGCY	5 cut(s)	17, 246, 537, 546, 2181
BstHHI	GCGC	7 cut(s)	16, 110, 245, 536, 545, 2180, 2217
BstKTI	GATC	6 cut(s)	1570, 1600, 1666, 2193, 2269, 2389
BstMAI	GTCTC	4 cut(s)	709, 963, 1464, 2097
BstMBI	GATC	6 cut(s)	1567, 1597, 1663, 2190, 2266, 2386
BstMCI	CGRYCG	2 cut(s)	520, 1570
BstNI	CCWGG	5 cut(s)	773, 874, 1182, 1410, 1632
BstNSI	RCATGY	2 cut(s)	392, 565
BstPI	GGTNACC	1 cut(s)	2294
BstSCI	CCNGG	9 cut(s)	580, 678, 771, 795, 872, 972, 1180, 1408, 1630
BstSFI	CTRYAG	2 cut(s)	821, 1338
BstUI	CGCG	4 cut(s)	108, 138, 1566, 1581
BstV1I	GCAGC	8 cut(s)	372, 538, 807, 835, 1574, 1980, 2199, 2216
BstV2I	GAAGAC	1 cut(s)	1139
BstX2I	RGATCY	1 cut(s)	2190
BstXI	CCANNNNNNTGG	2 cut(s)	790, 1958
BstYI	RGATCY	1 cut(s)	2190
BstZ17I	GTATAC	1 cut(s)	2311
Bsu36I	CCTNAGG	1 cut(s)	1500
BtsCI	GGATG	6 cut(s)	867, 1282, 1534, 1552, 2290, 2415
BtsIMutI	CAGTG	2 cut(s)	1807, 1846
CfoI	GCGC	7 cut(s)	16, 110, 245, 536, 545, 2180, 2217
Cfr10I	RCCGGY	5 cut(s)	239, 442, 468, 889, 1847
Cfr13I	GGNCC	7 cut(s)	579, 760, 769, 793, 1628, 1823, 2138
CseI	GACGC	2 cut(s)	577, 691
CsiI	ACCWGGT	2 cut(s)	1180, 1408
Csp6I	GTAC	5 cut(s)	490, 850, 988, 1845, 2072
CviQI	GTAC	5 cut(s)	490, 850, 988, 1845, 2072
DdeI	CTNAG	9 cut(s)	272, 464, 473, 1137, 1220, 1500, 1838, 1918, 2208
DinI	GGCGCC	3 cut(s)	244, 544, 2179
DpnI	GATC	6 cut(s)	1569, 1599, 1665, 2192, 2268, 2388
DpnII	GATC	6 cut(s)	1567, 1597, 1663, 2190, 2266, 2386
DraIII	CACNNNGTG	1 cut(s)	1356
DriI	GACNNNNNGTC	1 cut(s)	1140
EaeI	YGGCCR	1 cut(s)	444
Eam1104I	CTCTTC	5 cut(s)	154, 172, 205, 518, 1734
Eam1105I	GACNNNNNGTC	1 cut(s)	1140
EarI	CTCTTC	5 cut(s)	154, 172, 205, 518, 1734
EciI	GGCGGA	6 cut(s)	41, 318, 333, 372, 617, 749
Ecl136II	GAGCTC	1 cut(s)	607
Eco130I	CCWWGG	5 cut(s)	597, 1236, 1951, 1957, 2131
Eco147I	AGGCCT	2 cut(s)	497, 1956
Eco24I	GRGCYC	1 cut(s)	609
Eco31I	GGTCTC	3 cut(s)	963, 1464, 2097
Eco47I	GGWCC	3 cut(s)	793, 1823, 2138
Eco53kI	GAGCTC	1 cut(s)	607
Eco57I	CTGAAG	1 cut(s)	2045
Eco72I	CACGTG	2 cut(s)	1754, 1889
Eco81I	CCTNAGG	1 cut(s)	1500
Eco88I	CYCGRG	1 cut(s)	2195
Eco91I	GGTNACC	1 cut(s)	2294
EcoICRI	GAGCTC	1 cut(s)	607
EcoO65I	GGTNACC	1 cut(s)	2294
EcoRII	CCWGG	5 cut(s)	771, 872, 1180, 1408, 1630
EcoT14I	CCWWGG	5 cut(s)	597, 1236, 1951, 1957, 2131
EcoT22I	ATGCAT	2 cut(s)	2125, 2248
EcoT38I	GRGCYC	1 cut(s)	609
EgeI	GGCGCC	3 cut(s)	244, 544, 2179
EheI	GGCGCC	3 cut(s)	244, 544, 2179
ErhI	CCWWGG	5 cut(s)	597, 1236, 1951, 1957, 2131
Esp3I	CGTCTC	1 cut(s)	709
FaqI	GGGAC	4 cut(s)	23, 42, 695, 1649
FauI	CCCGC	4 cut(s)	113, 119, 292, 1571
FauNDI	CATATG	2 cut(s)	722, 2338
FbaI	TGATCA	1 cut(s)	1597
FblI	GTMKAC	2 cut(s)	591, 2310
FokI	GGATG	6 cut(s)	874, 1289, 1521, 1559, 2297, 2402
FriOI	GRGCYC	1 cut(s)	609
FspBI	CTAG	4 cut(s)	629, 945, 1014, 2184
FspI	TGCGCA	1 cut(s)	2216
GlaI	GCGC	7 cut(s)	15, 109, 244, 535, 544, 2179, 2216
GsuI	CTGGAG	1 cut(s)	593
HaeII	RGCGCY	5 cut(s)	17, 246, 537, 546, 2181
HgaI	GACGC	2 cut(s)	577, 691
HhaI	GCGC	7 cut(s)	16, 110, 245, 536, 545, 2180, 2217
Hin1I	GRCGYC	4 cut(s)	243, 543, 588, 2178
Hin6I	GCGC	7 cut(s)	14, 108, 243, 534, 543, 2178, 2215
HinP1I	GCGC	7 cut(s)	14, 108, 243, 534, 543, 2178, 2215
HincII	GTYRAC	3 cut(s)	122, 1024, 1948
HindII	GTYRAC	3 cut(s)	122, 1024, 1948
HindIII	AAGCTT	2 cut(s)	1109, 1520
HinfI	GANTC	7 cut(s)	419, 428, 623, 1135, 1264, 1438, 1609
HpaI	GTTAAC	1 cut(s)	1024
HphI	GGTGA	9 cut(s)	25, 247, 703, 934, 952, 1075, 1085, 2180, 2438
Hpy166II	GTNNAC	7 cut(s)	122, 592, 1024, 1373, 1555, 1948, 2311
Hpy188I	TCNGA	8 cut(s)	502, 981, 1221, 1437, 1710, 1929, 2273, 2420
Hpy188III	TCNNGA	8 cut(s)	484, 610, 639, 968, 1153, 1502, 1511, 1544
Hpy8I	GTNNAC	7 cut(s)	122, 592, 1024, 1373, 1555, 1948, 2311
Hpy99I	CGWCG	4 cut(s)	98, 419, 542, 551
HpyCH4III	ACNGT	4 cut(s)	37, 253, 1420, 1875
HpyCH4IV	ACGT	3 cut(s)	756, 1753, 1888
HpyF3I	CTNAG	9 cut(s)	272, 464, 473, 1137, 1220, 1500, 1838, 1918, 2208
HpySE526I	ACGT	3 cut(s)	756, 1753, 1888
Hsp92I	GRCGYC	4 cut(s)	243, 543, 588, 2178
HspAI	GCGC	7 cut(s)	14, 108, 243, 534, 543, 2178, 2215
KasI	GGCGCC	3 cut(s)	242, 542, 2177
KpnI	GGTACC	2 cut(s)	991, 1848
KroI	GCCGGC	4 cut(s)	239, 442, 468, 889
KroNI	GCCGGC	4 cut(s)	241, 444, 470, 891
Ksp22I	TGATCA	1 cut(s)	1597
KspAI	GTTAAC	1 cut(s)	1024
Kzo9I	GATC	6 cut(s)	1567, 1597, 1663, 2190, 2266, 2386
LguI	GCTCTTC	2 cut(s)	154, 518
LmnI	GCTCC	5 cut(s)	73, 347, 531, 604, 612
Lsp1109I	GCAGC	8 cut(s)	372, 538, 807, 835, 1574, 1980, 2199, 2216
LweI	GCATC	5 cut(s)	759, 876, 1543, 1683, 2110
MabI	ACCWGGT	2 cut(s)	1180, 1408
MaeI	CTAG	4 cut(s)	629, 945, 1014, 2184
MaeII	ACGT	3 cut(s)	756, 1753, 1888
MaeIII	GTNAC	7 cut(s)	253, 940, 1420, 2081, 2156, 2294, 2324
MalI	GATC	6 cut(s)	1569, 1599, 1665, 2192, 2268, 2388
MbiI	CCGCTC	1 cut(s)	68
MboI	GATC	6 cut(s)	1567, 1597, 1663, 2190, 2266, 2386
MboII	GAAGA	9 cut(s)	141, 159, 192, 505, 1144, 1294, 1751, 1829, 1975
MflI	RGATCY	1 cut(s)	2190
MhlI	GDGCHC	2 cut(s)	513, 609
MluCI	AATT	6 cut(s)	634, 1033, 1160, 1299, 1696, 1715
Mly113I	GGCGCC	3 cut(s)	243, 543, 2178
MlyI	GAGTC	3 cut(s)	428, 1129, 1618
MmeI	TCCRAC	4 cut(s)	369, 642, 1853, 2080
Mph1103I	ATGCAT	2 cut(s)	2125, 2248
MreI	CGCCGGCG	1 cut(s)	239
MroNI	GCCGGC	4 cut(s)	239, 442, 468, 889
MslI	CAYNNNNRTG	5 cut(s)	755, 788, 1259, 2088, 2262
MspA1I	CMGCKG	4 cut(s)	477, 529, 2023, 2207
MspR9I	CCNGG	9 cut(s)	582, 680, 773, 797, 874, 974, 1182, 1410, 1632
MvaI	CCWGG	5 cut(s)	773, 874, 1182, 1410, 1632
MvnI	CGCG	4 cut(s)	108, 138, 1566, 1581
NaeI	GCCGGC	4 cut(s)	241, 444, 470, 891
NarI	GGCGCC	3 cut(s)	243, 543, 2178
NciI	CCSGG	4 cut(s)	582, 680, 797, 974
NdeI	CATATG	2 cut(s)	722, 2338
NdeII	GATC	6 cut(s)	1567, 1597, 1663, 2190, 2266, 2386
NgoMIV	GCCGGC	4 cut(s)	239, 442, 468, 889
NmuCI	GTSAC	4 cut(s)	253, 940, 2081, 2324
NsbI	TGCGCA	1 cut(s)	2216
NsiI	ATGCAT	2 cut(s)	2125, 2248
NspI	RCATGY	2 cut(s)	392, 565
OliI	CACNNNNGTG	1 cut(s)	2088
PaeI	GCATGC	1 cut(s)	392
PaeR7I	CTCGAG	1 cut(s)	2195
PceI	AGGCCT	2 cut(s)	497, 1956
PciI	ACATGT	1 cut(s)	561
PciSI	GCTCTTC	2 cut(s)	154, 518
PcsI	WCGNNNNNNNCGW	3 cut(s)	411, 546, 699
PdiI	GCCGGC	4 cut(s)	241, 444, 470, 891
PfeI	GAWTC	4 cut(s)	428, 623, 1264, 1438
Ple19I	CGATCG	1 cut(s)	1570
PleI	GAGTC	3 cut(s)	427, 1129, 1617
PluTI	GGCGCC	3 cut(s)	246, 546, 2181
PmaCI	CACGTG	2 cut(s)	1754, 1889
PmlI	CACGTG	2 cut(s)	1754, 1889
PpsI	GAGTC	3 cut(s)	427, 1129, 1617
Ppu21I	YACGTR	2 cut(s)	1754, 1889
PscI	ACATGT	1 cut(s)	561
Psp124BI	GAGCTC	1 cut(s)	609
Psp6I	CCWGG	5 cut(s)	771, 872, 1180, 1408, 1630
PspCI	CACGTG	2 cut(s)	1754, 1889
PspEI	GGTNACC	1 cut(s)	2294
PspGI	CCWGG	5 cut(s)	771, 872, 1180, 1408, 1630
PspPI	GGNCC	7 cut(s)	579, 760, 769, 793, 1628, 1823, 2138
PspXI	VCTCGAGB	1 cut(s)	2195
PstI	CTGCAG	2 cut(s)	825, 1342
PsuI	RGATCY	1 cut(s)	2190
PvuI	CGATCG	1 cut(s)	1570
PvuII	CAGCTG	2 cut(s)	2023, 2207
RsaI	GTAC	5 cut(s)	491, 851, 989, 1846, 2073
RsaNI	GTAC	5 cut(s)	490, 850, 988, 1845, 2072
RseI	CAYNNNNRTG	5 cut(s)	755, 788, 1259, 2088, 2262
SacI	GAGCTC	1 cut(s)	609
SapI	GCTCTTC	2 cut(s)	154, 518
Sau3AI	GATC	6 cut(s)	1567, 1597, 1663, 2190, 2266, 2386
Sau96I	GGNCC	7 cut(s)	579, 760, 769, 793, 1628, 1823, 2138
SchI	GAGTC	3 cut(s)	428, 1129, 1618
ScrFI	CCNGG	9 cut(s)	582, 680, 773, 797, 874, 974, 1182, 1410, 1632
SduI	GDGCHC	2 cut(s)	513, 609
SexAI	ACCWGGT	2 cut(s)	1180, 1408
SfaNI	GCATC	5 cut(s)	759, 876, 1543, 1683, 2110
SfcI	CTRYAG	2 cut(s)	821, 1338
SfiI	GGCCNNNNNGGCC	1 cut(s)	768
SfoI	GGCGCC	3 cut(s)	244, 544, 2179
Sfr274I	CTCGAG	1 cut(s)	2195
SgrAI	CRCCGGYG	1 cut(s)	239
SinI	GGWCC	3 cut(s)	793, 1823, 2138
SlaI	CTCGAG	1 cut(s)	2195
SmiMI	CAYNNNNRTG	5 cut(s)	755, 788, 1259, 2088, 2262
SmlI	CTYRAG	3 cut(s)	1511, 1523, 2195
SmoI	CTYRAG	3 cut(s)	1511, 1523, 2195
SpeI	ACTAGT	1 cut(s)	944
SphI	GCATGC	1 cut(s)	392
Sse9I	AATT	6 cut(s)	634, 1033, 1160, 1299, 1696, 1715
SseBI	AGGCCT	2 cut(s)	497, 1956
SspDI	GGCGCC	3 cut(s)	242, 542, 2177
SspMI	CTAG	4 cut(s)	629, 945, 1014, 2184
SstI	GAGCTC	1 cut(s)	609
StuI	AGGCCT	2 cut(s)	497, 1956
StyD4I	CCNGG	9 cut(s)	580, 678, 771, 795, 872, 972, 1180, 1408, 1630
StyI	CCWWGG	5 cut(s)	597, 1236, 1951, 1957, 2131
TaaI	ACNGT	4 cut(s)	37, 253, 1420, 1875
TaiI	ACGT	3 cut(s)	759, 1756, 1891
TaqI	TCGA	7 cut(s)	516, 648, 967, 1177, 1570, 1666, 2196
TasI	AATT	6 cut(s)	634, 1033, 1160, 1299, 1696, 1715
TatI	WGTACW	3 cut(s)	489, 849, 2071
TfiI	GAWTC	4 cut(s)	428, 623, 1264, 1438
TscAI	CASTG	2 cut(s)	1807, 1846
TseFI	GTSAC	4 cut(s)	253, 940, 2081, 2324
TseI	GCWGC	8 cut(s)	385, 526, 820, 823, 1587, 1968, 2204, 2212
Tsp45I	GTSAC	4 cut(s)	253, 940, 2081, 2324
TspDTI	ATGAA	6 cut(s)	1302, 1341, 1656, 1773, 2066, 2404
TspGWI	ACGGA	1 cut(s)	82
TspRI	CASTG	2 cut(s)	1807, 1846
VpaK11BI	GGWCC	3 cut(s)	793, 1823, 2138
XapI	RAATTY	3 cut(s)	1033, 1696, 1715
XceI	RCATGY	2 cut(s)	392, 565
XhoI	CTCGAG	1 cut(s)	2195
XmiI	GTMKAC	2 cut(s)	591, 2310
XspI	CTAG	4 cut(s)	629, 945, 1014, 2184
Zsp2I	ATGCAT	2 cut(s)	2125, 2248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.