Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0028377.1

Orthogroup ID

OG0004162

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 4972

Gene Structure 4972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0028377.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

atgagagcaaaagccgtcaaatgccgcgtgtcctcctcctcgtccctttctctaaaccctaaaccctcctcttccaaccacctcctcaaaagcctcgccaaaacattcgccggcgccaccgccgtcaccctcatcctaaacctaaccaatttccccgccttcatcggcggaggcggaggaggaggtcatggttccaatggaggaggaggcggcggcggcggcggaggaggagggttttggaggaggctgtttcgcctgcatgcggcgaaagccgacgagccgaacgagtcgtgggactctcacggcttgccgggcgacattgtggtccagctcagcaggctcagtggcttcaagaagtacaaggtctcggaggtcttgttcttcgaccggaggcggtggagcaccgtcggcgccgacgacaccatctccgacatggtgtccctcaggcccggcggcgtctacaccaaggccgagctccagaacgagctccaatccctggccaattgcggaatgttcgagaaggtcgacttcgaaggcaagaccaagccggacggcaccctcgccgtcaccgtctcgttcacggagagcacgtggcaggcggcggagaggttccggtgcattaacgtgggactgatggcgcaacccaagcccattgagatggacccggacatgaccgagagggagaagctccagtatttgaggaaccaggagagggattacaagaggaggatggagagggccaggccgtgtttgctgccggcttcggtgcagagggaggtgttgcagatggtgagagagcaggggaaggtgagtgctagggtgttgcagaagattcaggcccggattctcaagtggtaccaagatgaggggtatctgtgtgccaatgttgtcaactttgggaatttgaatacaaaggaggttgtgtgtgaggtggtggagggcgatattactcggctgcttattcagttccgggataagcttggcaatgttgtagaggggaagactcagagtcttgtggtcaagagagaattgcccaaacagcttcgaccaggtaatgcatttaacatagaagcagggaaacaagctctgaggaacttaacctccctgggattgttttcaaacattgaagtgaatccagtacctgatgagaagaatgaaggagggatagttgttgaaataaatcttaaagaacaagagcacaagactgctgaagtaagcacggaatggaacattgttcgcggacatggaggctatcccactttggcttcactgctacccggtggaactgttacatttcaacatcggaatatcaacggattgaataggtcccttattggttcagtaagcagtagcaacctctacaacctgcaggttcaggatgatcttgagtttaagcttgagtacgtgcatccatatctggatggtgtggacaatccccatgatcgcactctccgggtaggctgctttaacggtcgaaaattgagtccagtcttcactggtgggccaggggatgatgaagttccccctgtatgggttgatcgcgctggcatgaaggctaatataacagagaatttgagccgtcagagcaaattcacttatggtcttgtgatggaagagataaccacacgtgatgaacaaaatcatatatgttcaaatggccaaagagtgctgcccagtggaggtgtcagtgaagatggacctccaacaactctcagcggtactggcattgaccatgtggcatttttacagtcaaatatcacacatgacaacaccaagtttgtgaatggaaccttagttggtgagaggaatgtgtttcaggttgaccaaggccttggcattggcagcaagtttccattcttcaaccgccaccagttatcattaacaagatttttccagctgaaggaagtggaggaaggtgctggcaaaccaccaccacctgttcttgtacttcatggtcactatggtggctgtgttggagaccttccaagttatgatgcatttacccttgggggtccatattctgtgagaggttacaacatgggtgagataggcgccgctagacatatccttgag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

691

Amino Acids

75.77

Weight (kDa)

8.23

Isoelectric Point (pI)

44.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46740 AT4G09080 AT4G09080 AT4G09080
fragaria_vesca	FvH4_3g28760 FvH4_3g28760 FvH4_3g28760 FvH4_5g29410
malus_domestica	MD03G1086500.v1.1 MD11G1095600.v1.1
prunus_persica	Prupe.6G071100_v2.0.a1
pyrus_communis	pycom03g06860 pycom11g08100 pycom11g08110
rosa_chinensis	RchiOBHm_Chr5g0052291 RchiOBHm_Chr7g0222311
rosa_laevigata	RLG00000002071 RLG00000034828
rosa_multiflora	Rmu_sc0007069.1_g000009 Rmu_sc0028377.1_g000001 Rmu_sc0032875.1_g000001 Rmu_sc0032876.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028120 Rroxscaffold_3G00237120
rosa_rugosa	Rorug05G0273100 Rorug07G0207600
rosa_samantha	Rh5CG382000 Rh5DG371900 Rh7AG349900 Rh7DG346100
rosa_wichuraiana	Rw5G032630 Rw5G032670 Rw7G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	323
Acc36I	ACCTGC	2 cut(s)	1360, 1374
Acc65I	GGTACC	1 cut(s)	855
AccB1I	GGYRCC	5 cut(s)	113, 410, 554, 855, 2051
AccB7I	CCANNNNNTGG	1 cut(s)	496
AccI	GTMKAC	2 cut(s)	459, 525
AccII	CGCG	3 cut(s)	27, 1239, 1542
AcoI	YGGCCR	2 cut(s)	498, 1657
AcsI	RAATTY	3 cut(s)	901, 1570, 1589
AcuI	CTGAAG	2 cut(s)	1230, 1919
AcvI	CACGTG	2 cut(s)	591, 1628
AcyI	GRCGYC	4 cut(s)	114, 411, 456, 2052
AfaI	GTAC	6 cut(s)	359, 857, 1140, 1403, 1720, 1947
AfiI	CCNNNNNNNGG	8 cut(s)	262, 496, 712, 865, 1530, 1531, 1679, 1900
AflIII	ACRYGT	1 cut(s)	1625
AgsI	TTSAA	9 cut(s)	352, 907, 1119, 1127, 1175, 1298, 1321, 1653, 1861
AhdI	GACNNNNNGTC	2 cut(s)	436, 1008
AjnI	CCWGG	6 cut(s)	495, 705, 740, 1048, 1104, 1504
AleI	CACNNNNGTG	1 cut(s)	1962
AloI	GAACNNNNNNTCC	4 cut(s)	362, 394, 1085, 1117
AluBI	AGCT	9 cut(s)	331, 475, 487, 688, 979, 1042, 1085, 1396, 1897
AluI	AGCT	9 cut(s)	331, 475, 487, 688, 979, 1042, 1085, 1396, 1897
Alw21I	GWGCWC	5 cut(s)	404, 477, 489, 590, 1200
Alw26I	GTCTC	3 cut(s)	370, 577, 1971
AlwNI	CAGNNNCTG	1 cut(s)	1142
AoxI	GGCC	9 cut(s)	446, 468, 498, 738, 743, 837, 1502, 1657, 1828
ApeKI	GCWGC	5 cut(s)	754, 955, 1461, 1669, 1842
ApoI	RAATTY	3 cut(s)	901, 1570, 1589
ArsI	GACNNNNNNTTYG	2 cut(s)	1468, 1500
Asp718I	GGTACC	1 cut(s)	855
AspLEI	GCGC	5 cut(s)	116, 413, 640, 1544, 2054
AspS9I	GGNCC	9 cut(s)	325, 447, 661, 738, 838, 1326, 1502, 1697, 2012
AsuC2I	CCSGG	7 cut(s)	312, 450, 665, 841, 971, 1278, 1454
AsuHPI	GGTGA	6 cut(s)	118, 559, 802, 820, 1811, 2054
AsuII	TTCGAA	1 cut(s)	531
AvaII	GGWCC	5 cut(s)	325, 661, 1326, 1697, 2012
AxyI	CCTNAGG	1 cut(s)	443
BalI	TGGCCA	2 cut(s)	500, 1659
BanI	GGYRCC	5 cut(s)	113, 410, 554, 855, 2051
BanII	GRGCYC	2 cut(s)	477, 489
BbrPI	CACGTG	2 cut(s)	591, 1628
BbsI	GAAGAC	2 cut(s)	1007, 1483
Bbv12I	GWGCWC	5 cut(s)	404, 477, 489, 590, 1200
BbvI	GCAGC	5 cut(s)	741, 942, 1448, 1656, 1854
BccI	CCATC	8 cut(s)	431, 628, 652, 724, 781, 1415, 1603, 1688
BceAI	ACGGC	6 cut(s)	107, 319, 548, 568, 730, 1563
BciT130I	CCWGG	6 cut(s)	497, 707, 742, 1050, 1106, 1506
BcnI	CCSGG	7 cut(s)	312, 450, 665, 841, 971, 1278, 1454
BcoDI	GTCTC	3 cut(s)	370, 577, 1971
BfaI	CTAG	2 cut(s)	816, 2058
BfmI	CTRYAG	1 cut(s)	1367
BfoI	RGCGCY	3 cut(s)	117, 414, 2055
BfuAI	ACCTGC	2 cut(s)	1360, 1374
BlpI	GCTNAGC	1 cut(s)	332
Bme18I	GGWCC	5 cut(s)	325, 661, 1326, 1697, 2012
BmeRI	GACNNNNNGTC	2 cut(s)	436, 1008
BmgT120I	GGNCC	9 cut(s)	325, 447, 661, 738, 838, 1326, 1502, 1697, 2012
BmrI	ACTGGG	1 cut(s)	1668
BmsI	GCATC	2 cut(s)	1417, 1984
BmuI	ACTGGG	1 cut(s)	1668
BpiI	GAAGAC	2 cut(s)	1007, 1483
BpmI	CTGGAG	2 cut(s)	461, 674
Bpu1102I	GCTNAGC	1 cut(s)	332
Bpu14I	TTCGAA	1 cut(s)	531
BpuEI	CTTGAG	3 cut(s)	833, 1406, 1418
BpuMI	CCSGG	7 cut(s)	312, 450, 665, 841, 971, 1278, 1454
BsaAI	YACGTR	3 cut(s)	591, 1405, 1628
BsaHI	GRCGYC	4 cut(s)	114, 411, 456, 2052
BsaI	GGTCTC	2 cut(s)	370, 1971
BsaJI	CCNNGG	8 cut(s)	465, 495, 1104, 1105, 1505, 1825, 1831, 2005
BsaWI	WCCGGW	2 cut(s)	387, 612
Bsc4I	CCNNNNNNNGG	8 cut(s)	262, 496, 712, 865, 1530, 1531, 1679, 1900
Bse118I	RCCGGY	2 cut(s)	110, 757
Bse1I	ACTGG	7 cut(s)	691, 1136, 1487, 1501, 1674, 1726, 1870
Bse21I	CCTNAGG	1 cut(s)	443
Bse3DI	GCAATG	1 cut(s)	991
BseBI	CCWGG	6 cut(s)	497, 707, 742, 1050, 1106, 1506
BseDI	CCNNGG	8 cut(s)	465, 495, 1104, 1105, 1505, 1825, 1831, 2005
BseGI	GGATG	6 cut(s)	132, 735, 1384, 1408, 1426, 1516
BseLI	CCNNNNNNNGG	8 cut(s)	262, 496, 712, 865, 1530, 1531, 1679, 1900
BseMI	GCAATG	1 cut(s)	991
BseMII	CTCAG	6 cut(s)	346, 355, 457, 1019, 1079, 1726
BseNI	ACTGG	7 cut(s)	691, 1136, 1487, 1501, 1674, 1726, 1870
BseXI	GCAGC	5 cut(s)	741, 942, 1448, 1656, 1854
BsgI	GTGCAG	1 cut(s)	788
Bsh1236I	CGCG	3 cut(s)	27, 1239, 1542
Bsh1285I	CGRYCG	2 cut(s)	388, 1474
BshFI	GGCC	9 cut(s)	448, 470, 500, 740, 745, 839, 1504, 1659, 1830
BshNI	GGYRCC	5 cut(s)	113, 410, 554, 855, 2051
BsiEI	CGRYCG	2 cut(s)	388, 1474
BsiHKAI	GWGCWC	5 cut(s)	404, 477, 489, 590, 1200
BslFI	GGGAC	5 cut(s)	28, 308, 424, 642, 1312
BslI	CCNNNNNNNGG	8 cut(s)	262, 496, 712, 865, 1530, 1531, 1679, 1900
BsmAI	GTCTC	3 cut(s)	370, 577, 1971
BsmBI	CGTCTC	1 cut(s)	577
BsmFI	GGGAC	5 cut(s)	28, 308, 424, 642, 1312
BsnI	GGCC	9 cut(s)	448, 470, 500, 740, 745, 839, 1504, 1659, 1830
Bso31I	GGTCTC	2 cut(s)	370, 1971
Bsp119I	TTCGAA	1 cut(s)	531
Bsp1286I	GDGCHC	5 cut(s)	404, 477, 489, 590, 1200
Bsp143I	GATC	3 cut(s)	1381, 1441, 1537
Bsp1720I	GCTNAGC	1 cut(s)	332
BspANI	GGCC	9 cut(s)	448, 470, 500, 740, 745, 839, 1504, 1659, 1830
BspCNI	CTCAG	6 cut(s)	345, 354, 456, 1018, 1080, 1725
BspFNI	CGCG	3 cut(s)	27, 1239, 1542
BspMAI	CTGCAG	1 cut(s)	1371
BspMI	ACCTGC	2 cut(s)	1360, 1374
BspT104I	TTCGAA	1 cut(s)	531
BspT107I	GGYRCC	5 cut(s)	113, 410, 554, 855, 2051
BspTNI	GGTCTC	2 cut(s)	370, 1971
BsrDI	GCAATG	1 cut(s)	991
BsrFI	RCCGGY	2 cut(s)	110, 757
BsrI	ACTGG	7 cut(s)	691, 1136, 1487, 1501, 1674, 1726, 1870
BssAI	RCCGGY	2 cut(s)	110, 757
BssECI	CCNNGG	8 cut(s)	465, 495, 1104, 1105, 1505, 1825, 1831, 2005
BssMI	GATC	3 cut(s)	1381, 1441, 1537
BssNI	GRCGYC	4 cut(s)	114, 411, 456, 2052
BssT1I	CCWWGG	4 cut(s)	465, 1825, 1831, 2005
Bst2UI	CCWGG	6 cut(s)	497, 707, 742, 1050, 1106, 1506
Bst4CI	ACNGT	5 cut(s)	406, 571, 1288, 1472, 1749
Bst6I	CTCTTC	2 cut(s)	76, 1608
BstACI	GRCGYC	4 cut(s)	114, 411, 456, 2052
BstBAI	YACGTR	3 cut(s)	591, 1405, 1628
BstBI	TTCGAA	1 cut(s)	531
BstC8I	GCNNGC	9 cut(s)	112, 257, 261, 308, 338, 597, 759, 1546, 1921
BstDEI	CTNAG	7 cut(s)	332, 341, 443, 1005, 1088, 1712, 1792
BstF5I	GGATG	6 cut(s)	132, 735, 1384, 1408, 1426, 1516
BstFNI	CGCG	3 cut(s)	27, 1239, 1542
BstH2I	RGCGCY	3 cut(s)	117, 414, 2055
BstHHI	GCGC	5 cut(s)	116, 413, 640, 1544, 2054
BstKTI	GATC	3 cut(s)	1384, 1444, 1540
BstMAI	GTCTC	3 cut(s)	370, 577, 1971
BstMBI	GATC	3 cut(s)	1381, 1441, 1537
BstMCI	CGRYCG	2 cut(s)	388, 1474
BstNI	CCWGG	6 cut(s)	497, 707, 742, 1050, 1106, 1506
BstNSI	RCATGY	1 cut(s)	263
BstSFI	CTRYAG	1 cut(s)	1367
BstUI	CGCG	3 cut(s)	27, 1239, 1542
BstV1I	GCAGC	5 cut(s)	741, 942, 1448, 1656, 1854
BstV2I	GAAGAC	2 cut(s)	1007, 1483
BstXI	CCANNNNNNTGG	2 cut(s)	658, 1832
Bsu36I	CCTNAGG	1 cut(s)	443
BsuRI	GGCC	9 cut(s)	448, 470, 500, 740, 745, 839, 1504, 1659, 1830
BtsCI	GGATG	6 cut(s)	132, 735, 1384, 1408, 1426, 1516
BtsI	GCAGTG	1 cut(s)	1268
BtsIMutI	CAGTG	5 cut(s)	349, 1268, 1494, 1681, 1693
BveI	ACCTGC	2 cut(s)	1360, 1374
Cac8I	GCNNGC	9 cut(s)	112, 257, 261, 308, 338, 597, 759, 1546, 1921
CaiI	CAGNNNCTG	1 cut(s)	1142
CfoI	GCGC	5 cut(s)	116, 413, 640, 1544, 2054
Cfr10I	RCCGGY	2 cut(s)	110, 757
Cfr13I	GGNCC	9 cut(s)	325, 447, 661, 738, 838, 1326, 1502, 1697, 2012
CseI	GACGC	1 cut(s)	445
CsiI	ACCWGGT	1 cut(s)	1048
Csp6I	GTAC	6 cut(s)	358, 856, 1139, 1402, 1719, 1946
CviQI	GTAC	6 cut(s)	358, 856, 1139, 1402, 1719, 1946
DdeI	CTNAG	7 cut(s)	332, 341, 443, 1005, 1088, 1712, 1792
DinI	GGCGCC	3 cut(s)	115, 412, 2053
DpnI	GATC	3 cut(s)	1383, 1443, 1539
DpnII	GATC	3 cut(s)	1381, 1441, 1537
DrdI	GACNNNNNNGTC	1 cut(s)	323
DriI	GACNNNNNGTC	2 cut(s)	436, 1008
DseDI	GACNNNNNNGTC	1 cut(s)	323
EaeI	YGGCCR	2 cut(s)	498, 1657
Eam1104I	CTCTTC	2 cut(s)	76, 1608
Eam1105I	GACNNNNNGTC	2 cut(s)	436, 1008
EarI	CTCTTC	2 cut(s)	76, 1608
EciI	GGCGGA	4 cut(s)	183, 189, 237, 617
Ecl136II	GAGCTC	2 cut(s)	475, 487
Eco130I	CCWWGG	4 cut(s)	465, 1825, 1831, 2005
Eco147I	AGGCCT	1 cut(s)	1830
Eco24I	GRGCYC	2 cut(s)	477, 489
Eco31I	GGTCTC	2 cut(s)	370, 1971
Eco47I	GGWCC	5 cut(s)	325, 661, 1326, 1697, 2012
Eco53kI	GAGCTC	2 cut(s)	475, 487
Eco57I	CTGAAG	2 cut(s)	1230, 1919
Eco72I	CACGTG	2 cut(s)	591, 1628
Eco81I	CCTNAGG	1 cut(s)	443
EcoICRI	GAGCTC	2 cut(s)	475, 487
EcoO109I	RGGNCCY	1 cut(s)	1326
EcoRII	CCWGG	6 cut(s)	495, 705, 740, 1048, 1104, 1504
EcoT14I	CCWWGG	4 cut(s)	465, 1825, 1831, 2005
EcoT22I	ATGCAT	2 cut(s)	1060, 1999
EcoT38I	GRGCYC	2 cut(s)	477, 489
EgeI	GGCGCC	3 cut(s)	115, 412, 2053
EheI	GGCGCC	3 cut(s)	115, 412, 2053
ErhI	CCWWGG	4 cut(s)	465, 1825, 1831, 2005
Esp3I	CGTCTC	1 cut(s)	577
FalI	AAGNNNNNCTT	2 cut(s)	512, 544
FaqI	GGGAC	5 cut(s)	28, 308, 424, 642, 1312
FauI	CCCGC	1 cut(s)	163
FblI	GTMKAC	2 cut(s)	459, 525
FokI	GGATG	6 cut(s)	119, 742, 1391, 1395, 1433, 1523
FriOI	GRGCYC	2 cut(s)	477, 489
FspBI	CTAG	2 cut(s)	816, 2058
GlaI	GCGC	5 cut(s)	115, 412, 639, 1543, 2053
GsuI	CTGGAG	2 cut(s)	461, 674
HaeII	RGCGCY	3 cut(s)	117, 414, 2055
HaeIII	GGCC	9 cut(s)	448, 470, 500, 740, 745, 839, 1504, 1659, 1830
HgaI	GACGC	1 cut(s)	445
HhaI	GCGC	5 cut(s)	116, 413, 640, 1544, 2054
Hin1I	GRCGYC	4 cut(s)	114, 411, 456, 2052
Hin6I	GCGC	5 cut(s)	114, 411, 638, 1542, 2052
HinP1I	GCGC	5 cut(s)	114, 411, 638, 1542, 2052
HincII	GTYRAC	3 cut(s)	526, 892, 1822
HindII	GTYRAC	3 cut(s)	526, 892, 1822
HindIII	AAGCTT	2 cut(s)	977, 1394
HinfI	GANTC	8 cut(s)	287, 296, 832, 844, 1003, 1009, 1132, 1483
HphI	GGTGA	6 cut(s)	118, 559, 802, 820, 1811, 2054
Hpy166II	GTNNAC	6 cut(s)	460, 526, 579, 892, 1429, 1822
Hpy188I	TCNGA	6 cut(s)	370, 430, 1008, 1089, 1305, 1584
Hpy188III	TCNNGA	7 cut(s)	352, 478, 517, 1021, 1376, 1385, 1418
Hpy8I	GTNNAC	6 cut(s)	460, 526, 579, 892, 1429, 1822
Hpy99I	CGWCG	3 cut(s)	278, 410, 419
HpyAV	CCTTC	9 cut(s)	169, 514, 527, 799, 1151, 1546, 1894, 1907, 1991
HpyCH4III	ACNGT	5 cut(s)	406, 571, 1288, 1472, 1749
HpyCH4IV	ACGT	4 cut(s)	590, 624, 1404, 1627
HpyCH4V	TGCA	9 cut(s)	259, 618, 769, 784, 826, 1058, 1369, 1408, 1997
HpyF3I	CTNAG	7 cut(s)	332, 341, 443, 1005, 1088, 1712, 1792
HpySE526I	ACGT	4 cut(s)	590, 624, 1404, 1627
Hsp92I	GRCGYC	4 cut(s)	114, 411, 456, 2052
HspAI	GCGC	5 cut(s)	114, 411, 638, 1542, 2052
KasI	GGCGCC	3 cut(s)	113, 410, 2051
KpnI	GGTACC	1 cut(s)	859
KroI	GCCGGC	2 cut(s)	110, 757
KroNI	GCCGGC	2 cut(s)	112, 759
Kzo9I	GATC	3 cut(s)	1381, 1441, 1537
LmnI	GCTCC	4 cut(s)	399, 480, 492, 693
Lsp1109I	GCAGC	5 cut(s)	741, 942, 1448, 1656, 1854
LweI	GCATC	2 cut(s)	1417, 1984
MabI	ACCWGGT	1 cut(s)	1048
MaeI	CTAG	2 cut(s)	816, 2058
MaeII	ACGT	4 cut(s)	590, 624, 1404, 1627
MaeIII	GTNAC	5 cut(s)	124, 565, 1288, 1955, 2030
MalI	GATC	3 cut(s)	1383, 1443, 1539
MboI	GATC	3 cut(s)	1381, 1441, 1537
MboII	GAAGA	9 cut(s)	63, 373, 841, 1012, 1162, 1483, 1625, 1703, 1849
MfeI	CAATTG	1 cut(s)	502
MhlI	GDGCHC	5 cut(s)	404, 477, 489, 590, 1200
MlsI	TGGCCA	2 cut(s)	500, 1659
MluCI	AATT	7 cut(s)	148, 502, 901, 1028, 1478, 1570, 1589
MluNI	TGGCCA	2 cut(s)	500, 1659
Mly113I	GGCGCC	3 cut(s)	114, 411, 2052
MlyI	GAGTC	5 cut(s)	290, 296, 997, 1018, 1492
MmeI	TCCRAC	4 cut(s)	99, 453, 1727, 1954
Mox20I	TGGCCA	2 cut(s)	500, 1659
Mph1103I	ATGCAT	2 cut(s)	1060, 1999
MreI	CGCCGGCG	1 cut(s)	110
MroNI	GCCGGC	2 cut(s)	110, 757
MscI	TGGCCA	2 cut(s)	500, 1659
MseI	TTAA	7 cut(s)	621, 1062, 1097, 1185, 1392, 1467, 1880
MslI	CAYNNNNRTG	4 cut(s)	623, 656, 1127, 1962
Msp20I	TGGCCA	2 cut(s)	500, 1659
MspA1I	CMGCKG	2 cut(s)	1716, 1897
MunI	CAATTG	1 cut(s)	502
MvaI	CCWGG	6 cut(s)	497, 707, 742, 1050, 1106, 1506
MvnI	CGCG	3 cut(s)	27, 1239, 1542
NaeI	GCCGGC	2 cut(s)	112, 759
NarI	GGCGCC	3 cut(s)	114, 411, 2052
NciI	CCSGG	7 cut(s)	312, 450, 665, 841, 971, 1278, 1454
NdeII	GATC	3 cut(s)	1381, 1441, 1537
NgoMIV	GCCGGC	2 cut(s)	110, 757
NmeAIII	GCCGAG	2 cut(s)	496, 931
NmuCI	GTSAC	3 cut(s)	124, 565, 1955
NsiI	ATGCAT	2 cut(s)	1060, 1999
NspI	RCATGY	1 cut(s)	263
NspV	TTCGAA	1 cut(s)	531
OliI	CACNNNNGTG	1 cut(s)	1962
PaeI	GCATGC	1 cut(s)	263
PasI	CCCWGGG	1 cut(s)	1105
PceI	AGGCCT	1 cut(s)	1830
PcsI	WCGNNNNNNNCGW	5 cut(s)	282, 414, 522, 567, 587
PdiI	GCCGGC	2 cut(s)	112, 759
PfeI	GAWTC	3 cut(s)	832, 844, 1132
PflMI	CCANNNNNTGG	1 cut(s)	496
PfoI	TCCNGGA	1 cut(s)	969
PleI	GAGTC	5 cut(s)	290, 295, 997, 1017, 1491
PluTI	GGCGCC	3 cut(s)	117, 414, 2055
PmaCI	CACGTG	2 cut(s)	591, 1628
PmlI	CACGTG	2 cut(s)	591, 1628
PpsI	GAGTC	5 cut(s)	290, 295, 997, 1017, 1491
Ppu21I	YACGTR	3 cut(s)	591, 1405, 1628
PpuMI	RGGWCCY	1 cut(s)	1326
Psp124BI	GAGCTC	2 cut(s)	477, 489
Psp5II	RGGWCCY	1 cut(s)	1326
Psp6I	CCWGG	6 cut(s)	495, 705, 740, 1048, 1104, 1504
PspCI	CACGTG	2 cut(s)	591, 1628
PspGI	CCWGG	6 cut(s)	495, 705, 740, 1048, 1104, 1504
PspPI	GGNCC	9 cut(s)	325, 447, 661, 738, 838, 1326, 1502, 1697, 2012
PspPPI	RGGWCCY	1 cut(s)	1326
PstI	CTGCAG	1 cut(s)	1371
PstNI	CAGNNNCTG	1 cut(s)	1142
PvuII	CAGCTG	1 cut(s)	1897
RsaI	GTAC	6 cut(s)	359, 857, 1140, 1403, 1720, 1947
RsaNI	GTAC	6 cut(s)	358, 856, 1139, 1402, 1719, 1946
RseI	CAYNNNNRTG	4 cut(s)	623, 656, 1127, 1962
SacI	GAGCTC	2 cut(s)	477, 489
SalI	GTCGAC	1 cut(s)	524
SaqAI	TTAA	7 cut(s)	621, 1062, 1097, 1185, 1392, 1467, 1880
Sau3AI	GATC	3 cut(s)	1381, 1441, 1537
Sau96I	GGNCC	9 cut(s)	325, 447, 661, 738, 838, 1326, 1502, 1697, 2012
SbfI	CCTGCAGG	1 cut(s)	1371
SchI	GAGTC	5 cut(s)	290, 296, 997, 1018, 1492
SdaI	CCTGCAGG	1 cut(s)	1371
SduI	GDGCHC	5 cut(s)	404, 477, 489, 590, 1200
SexAI	ACCWGGT	1 cut(s)	1048
SfaNI	GCATC	2 cut(s)	1417, 1984
SfcI	CTRYAG	1 cut(s)	1367
SfoI	GGCGCC	3 cut(s)	115, 412, 2053
SfuI	TTCGAA	1 cut(s)	531
SgrAI	CRCCGGYG	1 cut(s)	110
SinI	GGWCC	5 cut(s)	325, 661, 1326, 1697, 2012
SmiMI	CAYNNNNRTG	4 cut(s)	623, 656, 1127, 1962
SmlI	CTYRAG	4 cut(s)	848, 1385, 1397, 2069
SmoI	CTYRAG	4 cut(s)	848, 1385, 1397, 2069
SphI	GCATGC	1 cut(s)	263
Sse8387I	CCTGCAGG	1 cut(s)	1371
Sse9I	AATT	7 cut(s)	148, 502, 901, 1028, 1478, 1570, 1589
SseBI	AGGCCT	1 cut(s)	1830
SspDI	GGCGCC	3 cut(s)	113, 410, 2051
SspMI	CTAG	2 cut(s)	816, 2058
SstI	GAGCTC	2 cut(s)	477, 489
StuI	AGGCCT	1 cut(s)	1830
StyI	CCWWGG	4 cut(s)	465, 1825, 1831, 2005
TaaI	ACNGT	5 cut(s)	406, 571, 1288, 1472, 1749
TaiI	ACGT	4 cut(s)	593, 627, 1407, 1630
TaqI	TCGA	6 cut(s)	384, 516, 525, 531, 1045, 1474
TaqII	GACCGA	1 cut(s)	689
TasI	AATT	7 cut(s)	148, 502, 901, 1028, 1478, 1570, 1589
TatI	WGTACW	2 cut(s)	357, 1945
TauI	GCSGC	9 cut(s)	27, 213, 216, 219, 222, 266, 456, 602, 2057
TfiI	GAWTC	3 cut(s)	832, 844, 1132
Tru1I	TTAA	7 cut(s)	621, 1062, 1097, 1185, 1392, 1467, 1880
Tru9I	TTAA	7 cut(s)	621, 1062, 1097, 1185, 1392, 1467, 1880
TscAI	CASTG	5 cut(s)	349, 1275, 1501, 1681, 1693
TseFI	GTSAC	3 cut(s)	124, 565, 1955
TseI	GCWGC	5 cut(s)	754, 955, 1461, 1669, 1842
Tsp45I	GTSAC	3 cut(s)	124, 565, 1955
TspDTI	ATGAA	6 cut(s)	151, 1170, 1530, 1565, 1647, 1940
TspGWI	ACGGA	3 cut(s)	596, 1235, 1329
TspRI	CASTG	5 cut(s)	349, 1275, 1501, 1681, 1693
Van91I	CCANNNNNTGG	1 cut(s)	496
VpaK11BI	GGWCC	5 cut(s)	325, 661, 1326, 1697, 2012
XapI	RAATTY	3 cut(s)	901, 1570, 1589
XceI	RCATGY	1 cut(s)	263
XcmI	CCANNNNNNNNNTGG	1 cut(s)	430
XmiI	GTMKAC	2 cut(s)	459, 525
XspI	CTAG	2 cut(s)	816, 2058
Zsp2I	ATGCAT	2 cut(s)	1060, 1999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.