Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004162

Physical Location & Seq

Genomic Coordinates Reverse (-)

41025228 .. 41030494

Gene Structure 5267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G029530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGTTCGAGAAGGTCGATTTGGAAGGGAAGACCAACCCCGACGGCACCCTCGGCGTCACCATTTCCTTCACTGAGAGCACGTGGCAGTCGGCGGACAAGTTCCGGTGTATCAACGTGGGCCTGATGGCGCAGTCCAAGCCCATCGAAATGGACCCGGACATGACTGATAAGGAGAAGATGGAGTATTTCAGGAACCAGGAGAAGGATTACAAGAGGAGGATTGAGAGGGCCAGGCCGTGCTTGTTGCCGGCTCCGGTGCAGAGGGAGGTGTTGCTCATGTTGAGAGAGCAAGGGAAGGTGAGTGCTAGGCTGTTGCAGAAGATTCGGGACCGGGTTCAGAAATGGTACCAAGATGAGGGATACGCGTGTGCTCAAGTTGTCAATTTCGGGAATTTGAACACCAAAGAGGTTGTGTGTGAAGTGGTGGAAGGTGATATCACACAGCTGGTTATTCAGTTTCAGGATAAGCTTGGCAATTTTGTGGAAGGGAACACTCAGATTCCTGTGGTGAAGAGAGAATTGCCCAAACAGCTCCGACCAGGTTATGTCTTTAATATTGAAGCAGGGAAACAAGCTCTGAGGAACATAAACTCCCTGGCATTGTTTTCAAACATTGAAGTGAATCCACGACCGGATGAGAAGAATGAAGGAGGGATAATTGTTGAAATAAAGCTTAAAGAACTAGAACAAAAGACCGCCGAAGTCAGCACGGAATGGAGCATTGTTCCTGGACGTGGTGGTTATCCCACTTTGGCTTCACTGCAGCCTGGTGGGACAGTTACATTTGAACATCGAAATCTCAGTGGGTTGAATAGGTCTATTCTCGGTTCAGTAACCACCAGCAACTTCTACAACCCTCAGGATGATCTTGCTTTTAAGCTTGAGTATGTGCATCCATATCTGGATGGTGTGTACAATCCCCGCAATCGCTCTCTCCGCGTAAGCTGCTTCAACAGTCGAAAATTGAGTCCAGTCTTTACTGGTGGGCCAGGGGCTGATGAAGTCCCCCCTATATGGGTTGACCGAGCGGGCATGAAGGCTAATATAACAGAGAATTTCAACCGTCAGAGCAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACACGTGATGAACGCAGCCATATCTGTTCAAATGGCCAAAGAGTGTTACCCAGTGGTGGAGTCAGTGAAGATGGACCTCCAACAACTCTGAGTGGTACGGGCATTGATCGTGTGGCATTTTTACAGTCAAATATCACACGTGATAACACCAAGTTCGTGAATGGAACTATAGTTGGTGAGAGGAATGTGTTTCAGGTTGACCAGGGCCTTGGCGTCGGCAGCAAGTTTCCATTCTTCAACCGCCACCAGCTAACGTTAACAAGATTTTTCCAGCTGAAGGAAGTGGAGGAAGGTGCCGGCAAACCACCACCACCTGTCCTTGTACTTCATGGTCACTATGGTGGCTGTGTTGGAGACCTTCCAAGTTATGATGCATTTACTCTTGGAGGTCCATATTCGGTGAGAGGTTACAACATGGGTGAAATAGGCGCTGCCAGGCAAATCCTTGAGCTTGCAGCTGAGCTACGGATACCAGTAAAGGGGACACATGTATATGCATTTGCAGAGCATGGCAATGATCTCGGAAGTTCAAAGGATGTCAAGGGTAACCCGACAGAGGTATACAGGCGAGTGGGTCATGGGTCATCATATGGTGTTGGTGTCAAGTTAGGTCTAGTAAGAGCAGAATATGCTGTGGATCACAACTCAGGCTCAGGTTCAGTATTCTTCCGATTTGGTGAGAGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

598

Amino Acids

66.51

Weight (kDa)

7.6

Isoelectric Point (pI)

38.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POTRA2_Toc75	PF25280	34 - 145	2.2e-59	Toc75-like, second POTRA domain
POTRA1_3_Toc75	PF25282	146 - 227	4.5e-31	Toc75-like, POTRA domain
Omp85	PF01103	266 - 595	4.4e-20	Omp85 superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46740 AT4G09080 AT4G09080 AT4G09080
fragaria_vesca	FvH4_3g28760 FvH4_3g28760 FvH4_3g28760 FvH4_5g29410
malus_domestica	MD03G1086500.v1.1 MD11G1095600.v1.1
prunus_persica	Prupe.6G071100_v2.0.a1
pyrus_communis	pycom03g06860 pycom11g08100 pycom11g08110
rosa_chinensis	RchiOBHm_Chr5g0052291 RchiOBHm_Chr7g0222311
rosa_laevigata	RLG00000002071 RLG00000034828
rosa_multiflora	Rmu_sc0007069.1_g000009 Rmu_sc0028377.1_g000001 Rmu_sc0032875.1_g000001 Rmu_sc0032876.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028120 Rroxscaffold_3G00237120
rosa_rugosa	Rorug05G0273100 Rorug07G0207600
rosa_samantha	Rh5CG382000 Rh5DG371900 Rh7AG349900 Rh7DG346100
rosa_wichuraiana	Rw5G032630 Rw5G032670 Rw7G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	345
AccB1I	GGYRCC	3 cut(s)	44, 345, 1400
AccBSI	CCGCTC	1 cut(s)	1028
AccI	GTMKAC	1 cut(s)	1668
AccII	CGCG	2 cut(s)	365, 939
AciI	CCGC	6 cut(s)	92, 696, 922, 937, 1028, 1348
AclI	AACGTT	1 cut(s)	1361
AclWI	GGATC	1 cut(s)	1752
AcoI	YGGCCR	1 cut(s)	1141
AcsI	RAATTY	3 cut(s)	391, 1054, 1073
AcuI	CTGAAG	1 cut(s)	1403
AcvI	CACGTG	3 cut(s)	81, 1112, 1247
AcyI	GRCGYC	2 cut(s)	54, 1320
AfaI	GTAC	4 cut(s)	347, 914, 1204, 1431
AfiI	CCNNNNNNNGG	9 cut(s)	202, 355, 734, 1014, 1015, 1163, 1384, 1586, 1663
AflIII	ACRYGT	4 cut(s)	363, 1109, 1244, 1594
AjiI	CACGTC	1 cut(s)	734
AjnI	CCWGG	9 cut(s)	195, 230, 538, 594, 727, 766, 988, 1308, 1541
AjuI	GAANNNNNNNTTGG	1 cut(s)	34
AleI	CACNNNNGTG	1 cut(s)	1446
AloI	GAACNNNNNNTCC	2 cut(s)	575, 607
Alw21I	GWGCWC	2 cut(s)	80, 373
Alw26I	GTCTC	1 cut(s)	1455
AlwI	GGATC	1 cut(s)	1752
AlwNI	CAGNNNCTG	1 cut(s)	995
AoxI	GGCC	6 cut(s)	118, 228, 233, 986, 1141, 1312
ApeKI	GCWGC	6 cut(s)	763, 945, 1122, 1326, 1538, 1562
ApoI	RAATTY	3 cut(s)	391, 1054, 1073
ArsI	GACNNNNNNTTYG	2 cut(s)	952, 984
Asp718I	GGTACC	1 cut(s)	345
AspLEI	GCGC	2 cut(s)	130, 1538
AspS9I	GGNCC	8 cut(s)	118, 151, 228, 328, 986, 1181, 1312, 1496
AsuC2I	CCSGG	2 cut(s)	155, 332
AsuHPI	GGTGA	8 cut(s)	49, 310, 443, 520, 1295, 1519, 1538, 1796
AvaII	GGWCC	4 cut(s)	151, 328, 1181, 1496
AxyI	CCTNAGG	1 cut(s)	858
BaeI	ACNNNNGTAYC	2 cut(s)	352, 385
BalI	TGGCCA	1 cut(s)	1143
BanI	GGYRCC	3 cut(s)	44, 345, 1400
BbrPI	CACGTG	3 cut(s)	81, 1112, 1247
BbsI	GAAGAC	1 cut(s)	35
Bbv12I	GWGCWC	2 cut(s)	80, 373
BbvI	GCAGC	6 cut(s)	775, 932, 1134, 1338, 1525, 1574
BccI	CCATC	5 cut(s)	118, 149, 172, 899, 1172
BceAI	ACGGC	2 cut(s)	58, 220
BcgI	CGANNNNNNTGC	4 cut(s)	305, 339, 1609, 1643
BciT130I	CCWGG	9 cut(s)	197, 232, 540, 596, 729, 768, 990, 1310, 1543
BciVI	GTATCC	2 cut(s)	353, 1569
BcnI	CCSGG	2 cut(s)	155, 332
BcoDI	GTCTC	1 cut(s)	1455
BfaI	CTAG	3 cut(s)	306, 683, 1721
BfmI	CTRYAG	2 cut(s)	761, 1275
BfoI	RGCGCY	1 cut(s)	1539
BfuI	GTATCC	2 cut(s)	353, 1569
BisI	GCNGC	6 cut(s)	764, 946, 1123, 1327, 1539, 1563
BlpI	GCTNAGC	1 cut(s)	1566
BlsI	GCNGC	6 cut(s)	765, 947, 1124, 1328, 1540, 1564
Bme18I	GGWCC	4 cut(s)	151, 328, 1181, 1496
BmgBI	CACGTC	1 cut(s)	734
BmgT120I	GGNCC	8 cut(s)	118, 151, 228, 328, 986, 1181, 1312, 1496
BmiI	GGNNCC	7 cut(s)	46, 153, 194, 252, 329, 347, 1402
BmrI	ACTGGG	1 cut(s)	1152
BmsI	GCATC	2 cut(s)	901, 1468
BmuI	ACTGGG	1 cut(s)	1152
BpiI	GAAGAC	1 cut(s)	35
Bpu10I	CCTNAGC	1 cut(s)	1759
Bpu1102I	GCTNAGC	1 cut(s)	1566
BpuEI	CTTGAG	3 cut(s)	357, 902, 1574
BpuMI	CCSGG	2 cut(s)	155, 332
BsaAI	YACGTR	3 cut(s)	81, 1112, 1247
BsaHI	GRCGYC	2 cut(s)	54, 1320
BsaI	GGTCTC	1 cut(s)	1455
BsaJI	CCNNGG	5 cut(s)	49, 594, 989, 1309, 1315
BsaWI	WCCGGW	3 cut(s)	102, 253, 631
BsaXI	ACNNNNNCTCC	2 cut(s)	575, 605
Bsc4I	CCNNNNNNNGG	9 cut(s)	202, 355, 734, 1014, 1015, 1163, 1384, 1586, 1663
Bse118I	RCCGGY	2 cut(s)	247, 1403
Bse1I	ACTGG	4 cut(s)	971, 985, 1158, 1580
Bse21I	CCTNAGG	1 cut(s)	858
Bse3DI	GCAATG	1 cut(s)	1627
BseBI	CCWGG	9 cut(s)	197, 232, 540, 596, 729, 768, 990, 1310, 1543
BseDI	CCNNGG	5 cut(s)	49, 594, 989, 1309, 1315
BseGI	GGATG	5 cut(s)	640, 868, 892, 910, 1648
BseLI	CCNNNNNNNGG	9 cut(s)	202, 355, 734, 1014, 1015, 1163, 1384, 1586, 1663
BseMI	GCAATG	1 cut(s)	1627
BseMII	CTCAG	9 cut(s)	63, 509, 569, 814, 872, 1187, 1557, 1767, 1773
BseNI	ACTGG	4 cut(s)	971, 985, 1158, 1580
BseRI	GAGGAG	1 cut(s)	229
BseXI	GCAGC	6 cut(s)	775, 932, 1134, 1338, 1525, 1574
BsgI	GTGCAG	1 cut(s)	278
Bsh1236I	CGCG	2 cut(s)	365, 939
Bsh1285I	CGRYCG	1 cut(s)	632
BshFI	GGCC	6 cut(s)	120, 230, 235, 988, 1143, 1314
BshNI	GGYRCC	3 cut(s)	44, 345, 1400
BsiEI	CGRYCG	1 cut(s)	632
BsiHKAI	GWGCWC	2 cut(s)	80, 373
BsiSI	CCGG	7 cut(s)	103, 155, 248, 254, 331, 632, 1404
BslFI	GGGAC	4 cut(s)	341, 787, 989, 1603
BslI	CCNNNNNNNGG	9 cut(s)	202, 355, 734, 1014, 1015, 1163, 1384, 1586, 1663
BsmAI	GTCTC	1 cut(s)	1455
BsmFI	GGGAC	4 cut(s)	341, 787, 989, 1603
BsnI	GGCC	6 cut(s)	120, 230, 235, 988, 1143, 1314
Bso31I	GGTCTC	1 cut(s)	1455
Bsp1286I	GDGCHC	2 cut(s)	80, 373
Bsp1407I	TGTACA	1 cut(s)	912
Bsp143I	GATC	4 cut(s)	865, 1213, 1624, 1744
Bsp1720I	GCTNAGC	1 cut(s)	1566
BspACI	CCGC	6 cut(s)	92, 696, 922, 937, 1028, 1348
BspANI	GGCC	6 cut(s)	120, 230, 235, 988, 1143, 1314
BspCNI	CTCAG	9 cut(s)	64, 508, 570, 813, 871, 1188, 1558, 1766, 1772
BspFNI	CGCG	2 cut(s)	365, 939
BspLI	GGNNCC	7 cut(s)	46, 153, 194, 252, 329, 347, 1402
BspMAI	CTGCAG	1 cut(s)	765
BspPI	GGATC	1 cut(s)	1752
BspT107I	GGYRCC	3 cut(s)	44, 345, 1400
BspTNI	GGTCTC	1 cut(s)	1455
BsrBI	CCGCTC	1 cut(s)	1028
BsrDI	GCAATG	1 cut(s)	1627
BsrFI	RCCGGY	2 cut(s)	247, 1403
BsrGI	TGTACA	1 cut(s)	912
BsrI	ACTGG	4 cut(s)	971, 985, 1158, 1580
BssAI	RCCGGY	2 cut(s)	247, 1403
BssECI	CCNNGG	5 cut(s)	49, 594, 989, 1309, 1315
BssMI	GATC	4 cut(s)	865, 1213, 1624, 1744
BssNAI	GTATAC	1 cut(s)	1669
BssNI	GRCGYC	2 cut(s)	54, 1320
BssT1I	CCWWGG	1 cut(s)	1315
Bst1107I	GTATAC	1 cut(s)	1669
Bst2UI	CCWGG	9 cut(s)	197, 232, 540, 596, 729, 768, 990, 1310, 1543
Bst4CI	ACNGT	4 cut(s)	778, 956, 1064, 1233
Bst6I	CTCTTC	2 cut(s)	506, 1092
BstACI	GRCGYC	2 cut(s)	54, 1320
BstAPI	GCANNNNNTGC	1 cut(s)	1736
BstAUI	TGTACA	1 cut(s)	912
BstBAI	YACGTR	3 cut(s)	81, 1112, 1247
BstC8I	GCNNGC	4 cut(s)	249, 1030, 1405, 1560
BstDEI	CTNAG	9 cut(s)	72, 495, 578, 800, 858, 1196, 1566, 1753, 1759
BstEII	GGTNACC	1 cut(s)	1652
BstF5I	GGATG	5 cut(s)	640, 868, 892, 910, 1648
BstFNI	CGCG	2 cut(s)	365, 939
BstH2I	RGCGCY	1 cut(s)	1539
BstHHI	GCGC	2 cut(s)	130, 1538
BstKTI	GATC	4 cut(s)	868, 1216, 1627, 1747
BstMAI	GTCTC	1 cut(s)	1455
BstMBI	GATC	4 cut(s)	865, 1213, 1624, 1744
BstMCI	CGRYCG	1 cut(s)	632
BstMWI	GCNNNNNNNGC	7 cut(s)	51, 136, 529, 936, 945, 1326, 1736
BstNI	CCWGG	9 cut(s)	197, 232, 540, 596, 729, 768, 990, 1310, 1543
BstNSI	RCATGY	1 cut(s)	1598
BstPI	GGTNACC	1 cut(s)	1652
BstSFI	CTRYAG	2 cut(s)	761, 1275
BstUI	CGCG	2 cut(s)	365, 939
BstV1I	GCAGC	6 cut(s)	775, 932, 1134, 1338, 1525, 1574
BstV2I	GAAGAC	1 cut(s)	35
BstXI	CCANNNNNNTGG	2 cut(s)	148, 1316
BstZ17I	GTATAC	1 cut(s)	1669
Bsu36I	CCTNAGG	1 cut(s)	858
BsuI	GTATCC	2 cut(s)	353, 1569
BsuRI	GGCC	6 cut(s)	120, 230, 235, 988, 1143, 1314
BtrI	CACGTC	1 cut(s)	734
BtsCI	GGATG	5 cut(s)	640, 868, 892, 910, 1648
BtsI	GCAGTG	1 cut(s)	758
BtsIMutI	CAGTG	5 cut(s)	69, 758, 808, 1165, 1177
Cac8I	GCNNGC	4 cut(s)	249, 1030, 1405, 1560
CaiI	CAGNNNCTG	1 cut(s)	995
CfoI	GCGC	2 cut(s)	130, 1538
Cfr10I	RCCGGY	2 cut(s)	247, 1403
Cfr13I	GGNCC	8 cut(s)	118, 151, 228, 328, 986, 1181, 1312, 1496
CseI	GACGC	2 cut(s)	43, 1309
CsiI	ACCWGGT	1 cut(s)	538
Csp6I	GTAC	4 cut(s)	346, 913, 1203, 1430
CviAII	CATG	8 cut(s)	160, 277, 1033, 1436, 1522, 1595, 1616, 1685
CviQI	GTAC	4 cut(s)	346, 913, 1203, 1430
DdeI	CTNAG	9 cut(s)	72, 495, 578, 800, 858, 1196, 1566, 1753, 1759
DpnI	GATC	4 cut(s)	867, 1215, 1626, 1746
DpnII	GATC	4 cut(s)	865, 1213, 1624, 1744
EaeI	YGGCCR	1 cut(s)	1141
Eam1104I	CTCTTC	2 cut(s)	506, 1092
EarI	CTCTTC	2 cut(s)	506, 1092
EciI	GGCGGA	1 cut(s)	107
Eco130I	CCWWGG	1 cut(s)	1315
Eco31I	GGTCTC	1 cut(s)	1455
Eco32I	GATATC	1 cut(s)	436
Eco47I	GGWCC	4 cut(s)	151, 328, 1181, 1496
Eco57I	CTGAAG	1 cut(s)	1403
Eco72I	CACGTG	3 cut(s)	81, 1112, 1247
Eco81I	CCTNAGG	1 cut(s)	858
Eco91I	GGTNACC	1 cut(s)	1652
EcoO109I	RGGNCCY	1 cut(s)	1312
EcoO65I	GGTNACC	1 cut(s)	1652
EcoRII	CCWGG	9 cut(s)	195, 230, 538, 594, 727, 766, 988, 1308, 1541
EcoRV	GATATC	1 cut(s)	436
EcoT14I	CCWWGG	1 cut(s)	1315
EcoT22I	ATGCAT	2 cut(s)	1483, 1606
ErhI	CCWWGG	1 cut(s)	1315
FaeI	CATG	8 cut(s)	163, 280, 1036, 1439, 1525, 1598, 1619, 1688
FaqI	GGGAC	4 cut(s)	341, 787, 989, 1603
FatI	CATG	8 cut(s)	159, 276, 1032, 1435, 1521, 1594, 1615, 1684
FauI	CCCGC	2 cut(s)	929, 1021
FauNDI	CATATG	1 cut(s)	1696
FblI	GTMKAC	1 cut(s)	1668
Fnu4HI	GCNGC	6 cut(s)	764, 946, 1123, 1327, 1539, 1563
FokI	GGATG	5 cut(s)	647, 875, 879, 917, 1655
Fsp4HI	GCNGC	6 cut(s)	764, 946, 1123, 1327, 1539, 1563
FspBI	CTAG	3 cut(s)	306, 683, 1721
GlaI	GCGC	2 cut(s)	129, 1537
GluI	GCNGC	6 cut(s)	764, 946, 1123, 1327, 1539, 1563
HaeII	RGCGCY	1 cut(s)	1539
HaeIII	GGCC	6 cut(s)	120, 230, 235, 988, 1143, 1314
HapII	CCGG	7 cut(s)	103, 155, 248, 254, 331, 632, 1404
HgaI	GACGC	2 cut(s)	43, 1309
HhaI	GCGC	2 cut(s)	130, 1538
Hin1I	GRCGYC	2 cut(s)	54, 1320
Hin1II	CATG	8 cut(s)	163, 280, 1036, 1439, 1525, 1598, 1619, 1688
Hin6I	GCGC	2 cut(s)	128, 1536
HinP1I	GCGC	2 cut(s)	128, 1536
HincII	GTYRAC	3 cut(s)	1021, 1306, 1365
HindII	GTYRAC	3 cut(s)	1021, 1306, 1365
HindIII	AAGCTT	3 cut(s)	467, 671, 878
HinfI	GANTC	5 cut(s)	322, 499, 622, 967, 1167
HpaI	GTTAAC	1 cut(s)	1365
HpaII	CCGG	7 cut(s)	103, 155, 248, 254, 331, 632, 1404
HphI	GGTGA	8 cut(s)	49, 310, 443, 520, 1295, 1519, 1538, 1796
Hpy166II	GTNNAC	5 cut(s)	913, 1021, 1306, 1365, 1669
Hpy188I	TCNGA	8 cut(s)	339, 498, 536, 579, 1068, 1197, 1631, 1778
Hpy188III	TCNNGA	8 cut(s)	7, 190, 326, 388, 461, 860, 902, 1264
Hpy8I	GTNNAC	5 cut(s)	913, 1021, 1306, 1365, 1669
Hpy99I	CGWCG	2 cut(s)	44, 1325
HpyCH4III	ACNGT	4 cut(s)	778, 956, 1064, 1233
HpyCH4IV	ACGT	6 cut(s)	80, 114, 733, 1111, 1246, 1361
HpyCH4V	TGCA	8 cut(s)	259, 316, 763, 892, 1481, 1562, 1604, 1610
HpyF10VI	GCNNNNNNNGC	7 cut(s)	51, 136, 529, 936, 945, 1326, 1736
HpyF3I	CTNAG	9 cut(s)	72, 495, 578, 800, 858, 1196, 1566, 1753, 1759
HpySE526I	ACGT	6 cut(s)	80, 114, 733, 1111, 1246, 1361
Hsp92I	GRCGYC	2 cut(s)	54, 1320
Hsp92II	CATG	8 cut(s)	163, 280, 1036, 1439, 1525, 1598, 1619, 1688
HspAI	GCGC	2 cut(s)	128, 1536
KpnI	GGTACC	1 cut(s)	349
KroI	GCCGGC	2 cut(s)	247, 1403
KroNI	GCCGGC	2 cut(s)	249, 1405
KspAI	GTTAAC	1 cut(s)	1365
Kzo9I	GATC	4 cut(s)	865, 1213, 1624, 1744
LmnI	GCTCC	3 cut(s)	256, 537, 717
Lsp1109I	GCAGC	6 cut(s)	775, 932, 1134, 1338, 1525, 1574
LweI	GCATC	2 cut(s)	901, 1468
MabI	ACCWGGT	1 cut(s)	538
MaeI	CTAG	3 cut(s)	306, 683, 1721
MaeII	ACGT	6 cut(s)	80, 114, 733, 1111, 1246, 1361
MaeIII	GTNAC	7 cut(s)	55, 778, 832, 1152, 1439, 1514, 1652
MalI	GATC	4 cut(s)	867, 1215, 1626, 1746
MbiI	CCGCTC	1 cut(s)	1028
MboI	GATC	4 cut(s)	865, 1213, 1624, 1744
MboII	GAAGA	9 cut(s)	40, 187, 331, 523, 652, 1109, 1187, 1333, 1765
MhlI	GDGCHC	2 cut(s)	80, 373
MlsI	TGGCCA	1 cut(s)	1143
MluCI	AATT	8 cut(s)	382, 391, 475, 518, 657, 962, 1054, 1073
MluI	ACGCGT	1 cut(s)	363
MluNI	TGGCCA	1 cut(s)	1143
MlyI	GAGTC	2 cut(s)	976, 1176
MmeI	TCCRAC	3 cut(s)	559, 1211, 1438
Mox20I	TGGCCA	1 cut(s)	1143
Mph1103I	ATGCAT	2 cut(s)	1483, 1606
MroNI	GCCGGC	2 cut(s)	247, 1403
MscI	TGGCCA	1 cut(s)	1143
MseI	TTAA	4 cut(s)	552, 675, 876, 1364
MslI	CAYNNNNRTG	5 cut(s)	146, 617, 1446, 1599, 1620
Msp20I	TGGCCA	1 cut(s)	1143
MspA1I	CMGCKG	3 cut(s)	445, 1381, 1565
MspI	CCGG	7 cut(s)	103, 155, 248, 254, 331, 632, 1404
MvaI	CCWGG	9 cut(s)	197, 232, 540, 596, 729, 768, 990, 1310, 1543
MvnI	CGCG	2 cut(s)	365, 939
MwoI	GCNNNNNNNGC	7 cut(s)	51, 136, 529, 936, 945, 1326, 1736
NaeI	GCCGGC	2 cut(s)	249, 1405
NciI	CCSGG	2 cut(s)	155, 332
NdeI	CATATG	1 cut(s)	1696
NdeII	GATC	4 cut(s)	865, 1213, 1624, 1744
NgoMIV	GCCGGC	2 cut(s)	247, 1403
NlaIII	CATG	8 cut(s)	163, 280, 1036, 1439, 1525, 1598, 1619, 1688
NlaIV	GGNNCC	7 cut(s)	46, 153, 194, 252, 329, 347, 1402
NmeAIII	GCCGAG	1 cut(s)	30
NmuCI	GTSAC	2 cut(s)	55, 1439
NsiI	ATGCAT	2 cut(s)	1483, 1606
NspI	RCATGY	1 cut(s)	1598
OliI	CACNNNNGTG	1 cut(s)	1446
PciI	ACATGT	1 cut(s)	1594
PcsI	WCGNNNNNNNCGW	1 cut(s)	12
PdiI	GCCGGC	2 cut(s)	249, 1405
PfeI	GAWTC	3 cut(s)	322, 499, 622
PfoI	TCCNGGA	1 cut(s)	727
PkrI	GCNGC	6 cut(s)	765, 947, 1124, 1328, 1540, 1564
PleI	GAGTC	2 cut(s)	975, 1175
PmaCI	CACGTG	3 cut(s)	81, 1112, 1247
PmlI	CACGTG	3 cut(s)	81, 1112, 1247
PpsI	GAGTC	2 cut(s)	975, 1175
Ppu21I	YACGTR	3 cut(s)	81, 1112, 1247
PscI	ACATGT	1 cut(s)	1594
Psp1406I	AACGTT	1 cut(s)	1361
Psp6I	CCWGG	9 cut(s)	195, 230, 538, 594, 727, 766, 988, 1308, 1541
PspCI	CACGTG	3 cut(s)	81, 1112, 1247
PspEI	GGTNACC	1 cut(s)	1652
PspGI	CCWGG	9 cut(s)	195, 230, 538, 594, 727, 766, 988, 1308, 1541
PspN4I	GGNNCC	7 cut(s)	46, 153, 194, 252, 329, 347, 1402
PspPI	GGNCC	8 cut(s)	118, 151, 228, 328, 986, 1181, 1312, 1496
PstI	CTGCAG	1 cut(s)	765
PstNI	CAGNNNCTG	1 cut(s)	995
PvuII	CAGCTG	3 cut(s)	445, 1381, 1565
RsaI	GTAC	4 cut(s)	347, 914, 1204, 1431
RsaNI	GTAC	4 cut(s)	346, 913, 1203, 1430
RseI	CAYNNNNRTG	5 cut(s)	146, 617, 1446, 1599, 1620
SaqAI	TTAA	4 cut(s)	552, 675, 876, 1364
SatI	GCNGC	6 cut(s)	764, 946, 1123, 1327, 1539, 1563
Sau3AI	GATC	4 cut(s)	865, 1213, 1624, 1744
Sau96I	GGNCC	8 cut(s)	118, 151, 228, 328, 986, 1181, 1312, 1496
SchI	GAGTC	2 cut(s)	976, 1176
SduI	GDGCHC	2 cut(s)	80, 373
SexAI	ACCWGGT	1 cut(s)	538
SfaNI	GCATC	2 cut(s)	901, 1468
SfcI	CTRYAG	2 cut(s)	761, 1275
SinI	GGWCC	4 cut(s)	151, 328, 1181, 1496
SmiMI	CAYNNNNRTG	5 cut(s)	146, 617, 1446, 1599, 1620
SmlI	CTYRAG	3 cut(s)	372, 881, 1553
SmoI	CTYRAG	3 cut(s)	372, 881, 1553
Sse9I	AATT	8 cut(s)	382, 391, 475, 518, 657, 962, 1054, 1073
SsiI	CCGC	6 cut(s)	92, 696, 922, 937, 1028, 1348
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	3 cut(s)	306, 683, 1721
StyI	CCWWGG	1 cut(s)	1315
TaaI	ACNGT	4 cut(s)	778, 956, 1064, 1233
TaiI	ACGT	6 cut(s)	83, 117, 736, 1114, 1249, 1364
TaqI	TCGA	5 cut(s)	6, 15, 144, 793, 958
TaqII	GACCGA	1 cut(s)	1038
TasI	AATT	8 cut(s)	382, 391, 475, 518, 657, 962, 1054, 1073
TatI	WGTACW	2 cut(s)	912, 1429
TfiI	GAWTC	3 cut(s)	322, 499, 622
Tru1I	TTAA	4 cut(s)	552, 675, 876, 1364
Tru9I	TTAA	4 cut(s)	552, 675, 876, 1364
TscAI	CASTG	5 cut(s)	76, 765, 808, 1165, 1177
TseFI	GTSAC	2 cut(s)	55, 1439
TseI	GCWGC	6 cut(s)	763, 945, 1122, 1326, 1538, 1562
Tsp45I	GTSAC	2 cut(s)	55, 1439
TspDTI	ATGAA	5 cut(s)	660, 1014, 1049, 1131, 1424
TspGWI	ACGGA	2 cut(s)	725, 1588
TspRI	CASTG	5 cut(s)	76, 765, 808, 1165, 1177
VpaK11BI	GGWCC	4 cut(s)	151, 328, 1181, 1496
XapI	RAATTY	3 cut(s)	391, 1054, 1073
XceI	RCATGY	1 cut(s)	1598
XmiI	GTMKAC	1 cut(s)	1668
XspI	CTAG	3 cut(s)	306, 683, 1721
Zsp2I	ATGCAT	2 cut(s)	1483, 1606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.