Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0032875.1

Orthogroup ID

OG0004162

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 2770

Gene Structure 2770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0032875.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ggcggcggcggcggcggaggaggagggttttggaggaggctgtttcgcctgcatgcggcgaaagccgacgagccgaacgagtcgtgggactctcacggcttgccgggcgacattgtggtccagctcagcaggctcagtggcttcaagaagtacaaggtctcggaggtcttgttcttcgaccggaggcggtggagcaccgtcggcgccgacgacaccatctccgacatggtgtccctcaggcccggcggcgtctacaccaaggccgagctccagaacgagctccaatccctggccaattgcggaatgttcgagaaggtcgacttcgaaggcaagaccaagccggacggcaccctcgccgtcaccgtctcgttcacggagagcacgtggcaggcggcggagaggttccggtgcattaacgtgggactgatggcgcaacccaagcccattgagatggacccggacatgaccgagagggagaagctccagtatttgaggaaccaggagagggattacaagaggaggatggagagggccaggccgtgtttgctgccggcttcggtgcagagggaggtgttgcagatggtgagagagcaggggaaggtgagtgctagggtgttgcagaagattcaggcccggattctcaagtggtaccaagatgaggggtatctgtgtgccaatgttgtcaactttgggaatttgaatacaaaggaggttgtgtgtgaggtggtggagggcgatattactcggctgcttattcagttccgggataagcttggcaatgttgtagaggggaagactcagagtcttgtggtcaagagagaattgcccaaacagcttcgaccaggtaatgcatttaacatagaagcagggaaacaagctctgaggaacttaacctccctgggattgttttcaaacattgaagtgaatccagtacctgatgagaagaatgaaggagggatagttgttgaaataaatcttaaagaacaagagcacaagactgctgaagtaagcacggaatggaacattgttcgcggacatggaggctatcccactttggcttcactgctacccggtggaactgttacatttcaacatcggaatatcaacggattgaataggtcccttattggttcagtaagcagtagcaacctctacaacctgcaggttcaggatgatcttgagtttaagcttgagtacgtgcatccatatctggatggtgtggacaatccccatgatcgcactctccgggtaggctgctttaacggtcgaaaattgagtccagtcttcactggtgggccaggggatgatgaagttccccctgtatgggttgatcgcgctggcatgaaggctaatataacagagaatttgagccgtcagagcaaattcacttatggtcttgtgatggaagagataaccacacgtgatgaacaaaatcatatatgttcaaatggccaaagagtgctgcccagtggaggtgtcagtgaagatggacctccaacaactctcagcggtactggcattgaccatgtggcatttttacagtcaaatatcacacatgacaacaccaagtttgtgaatggaaccttagttggtgagaggaatgtgtttcaggttgaccaaggccttggcattggcagcaagtttccattcttcaaccgccaccagttatcattaacaagatttttccagctgaaggaagtggaggaaggtgctggcaaaccaccaccacctgttcttgtacttcatggtcactatggtggctgtgttggagaccttccaagttatgatgcatttacccttgggggtccatattctgtgagaggttacaacatgggtgagataggcgccgctagacatatcctcgaggtaggagctactttagccacaatcctttgtttattcgctcattccctatttcattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

640

Amino Acids

70.93

Weight (kDa)

6.51

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46740 AT4G09080 AT4G09080 AT4G09080
fragaria_vesca	FvH4_3g28760 FvH4_3g28760 FvH4_3g28760 FvH4_5g29410
malus_domestica	MD03G1086500.v1.1 MD11G1095600.v1.1
prunus_persica	Prupe.6G071100_v2.0.a1
pyrus_communis	pycom03g06860 pycom11g08100 pycom11g08110
rosa_chinensis	RchiOBHm_Chr5g0052291 RchiOBHm_Chr7g0222311
rosa_laevigata	RLG00000002071 RLG00000034828
rosa_multiflora	Rmu_sc0007069.1_g000009 Rmu_sc0028377.1_g000001 Rmu_sc0032875.1_g000001 Rmu_sc0032876.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028120 Rroxscaffold_3G00237120
rosa_rugosa	Rorug05G0273100 Rorug07G0207600
rosa_samantha	Rh5CG382000 Rh5DG371900 Rh7AG349900 Rh7DG346100
rosa_wichuraiana	Rw5G032630 Rw5G032670 Rw7G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
AbsI	CCTCGAGG	1 cut(s)	1862
Acc36I	ACCTGC	2 cut(s)	1153, 1167
Acc65I	GGTACC	1 cut(s)	648
AccB1I	GGYRCC	4 cut(s)	203, 347, 648, 1844
AccB7I	CCANNNNNTGG	1 cut(s)	289
AccI	GTMKAC	2 cut(s)	252, 318
AccII	CGCG	2 cut(s)	1032, 1335
AcoI	YGGCCR	2 cut(s)	291, 1450
AcsI	RAATTY	3 cut(s)	694, 1363, 1382
AcuI	CTGAAG	2 cut(s)	1023, 1712
AcvI	CACGTG	2 cut(s)	384, 1421
AcyI	GRCGYC	3 cut(s)	204, 249, 1845
AfaI	GTAC	6 cut(s)	152, 650, 933, 1196, 1513, 1740
AfiI	CCNNNNNNNGG	8 cut(s)	55, 289, 505, 658, 1323, 1324, 1472, 1693
AflIII	ACRYGT	1 cut(s)	1418
AgsI	TTSAA	9 cut(s)	145, 700, 912, 920, 968, 1091, 1114, 1446, 1654
AhdI	GACNNNNNGTC	2 cut(s)	229, 801
AjnI	CCWGG	6 cut(s)	288, 498, 533, 841, 897, 1297
AleI	CACNNNNGTG	1 cut(s)	1755
AloI	GAACNNNNNNTCC	4 cut(s)	155, 187, 878, 910
Alw21I	GWGCWC	5 cut(s)	197, 270, 282, 383, 993
Alw26I	GTCTC	3 cut(s)	163, 370, 1764
AlwNI	CAGNNNCTG	1 cut(s)	935
Ama87I	CYCGRG	1 cut(s)	1862
AoxI	GGCC	9 cut(s)	239, 261, 291, 531, 536, 630, 1295, 1450, 1621
ApeKI	GCWGC	5 cut(s)	547, 748, 1254, 1462, 1635
ApoI	RAATTY	3 cut(s)	694, 1363, 1382
ArsI	GACNNNNNNTTYG	2 cut(s)	1261, 1293
Asp718I	GGTACC	1 cut(s)	648
AspLEI	GCGC	4 cut(s)	206, 433, 1337, 1847
AspS9I	GGNCC	9 cut(s)	118, 240, 454, 531, 631, 1119, 1295, 1490, 1805
AsuC2I	CCSGG	7 cut(s)	105, 243, 458, 634, 764, 1071, 1247
AsuHPI	GGTGA	5 cut(s)	352, 595, 613, 1604, 1847
AsuII	TTCGAA	1 cut(s)	324
AvaI	CYCGRG	1 cut(s)	1862
AvaII	GGWCC	5 cut(s)	118, 454, 1119, 1490, 1805
AxyI	CCTNAGG	1 cut(s)	236
BalI	TGGCCA	2 cut(s)	293, 1452
BanI	GGYRCC	4 cut(s)	203, 347, 648, 1844
BanII	GRGCYC	2 cut(s)	270, 282
BbrPI	CACGTG	2 cut(s)	384, 1421
BbsI	GAAGAC	2 cut(s)	800, 1276
Bbv12I	GWGCWC	5 cut(s)	197, 270, 282, 383, 993
BbvI	GCAGC	5 cut(s)	534, 735, 1241, 1449, 1647
BccI	CCATC	8 cut(s)	224, 421, 445, 517, 574, 1208, 1396, 1481
BceAI	ACGGC	5 cut(s)	112, 341, 361, 523, 1356
BciT130I	CCWGG	6 cut(s)	290, 500, 535, 843, 899, 1299
BcnI	CCSGG	7 cut(s)	105, 243, 458, 634, 764, 1071, 1247
BcoDI	GTCTC	3 cut(s)	163, 370, 1764
BfaI	CTAG	2 cut(s)	609, 1851
BfmI	CTRYAG	1 cut(s)	1160
BfoI	RGCGCY	2 cut(s)	207, 1848
BfuAI	ACCTGC	2 cut(s)	1153, 1167
BlpI	GCTNAGC	1 cut(s)	125
Bme18I	GGWCC	5 cut(s)	118, 454, 1119, 1490, 1805
BmeRI	GACNNNNNGTC	2 cut(s)	229, 801
BmeT110I	CYCGRG	1 cut(s)	1862
BmgT120I	GGNCC	9 cut(s)	118, 240, 454, 531, 631, 1119, 1295, 1490, 1805
BmrI	ACTGGG	1 cut(s)	1461
BmsI	GCATC	2 cut(s)	1210, 1777
BmuI	ACTGGG	1 cut(s)	1461
BpiI	GAAGAC	2 cut(s)	800, 1276
BpmI	CTGGAG	2 cut(s)	254, 467
Bpu1102I	GCTNAGC	1 cut(s)	125
Bpu14I	TTCGAA	1 cut(s)	324
BpuEI	CTTGAG	3 cut(s)	626, 1199, 1211
BpuMI	CCSGG	7 cut(s)	105, 243, 458, 634, 764, 1071, 1247
BsaAI	YACGTR	3 cut(s)	384, 1198, 1421
BsaHI	GRCGYC	3 cut(s)	204, 249, 1845
BsaI	GGTCTC	2 cut(s)	163, 1764
BsaJI	CCNNGG	8 cut(s)	258, 288, 897, 898, 1298, 1618, 1624, 1798
BsaWI	WCCGGW	2 cut(s)	180, 405
Bsc4I	CCNNNNNNNGG	8 cut(s)	55, 289, 505, 658, 1323, 1324, 1472, 1693
Bse118I	RCCGGY	1 cut(s)	550
Bse1I	ACTGG	7 cut(s)	484, 929, 1280, 1294, 1467, 1519, 1663
Bse21I	CCTNAGG	1 cut(s)	236
Bse3DI	GCAATG	1 cut(s)	784
BseBI	CCWGG	6 cut(s)	290, 500, 535, 843, 899, 1299
BseDI	CCNNGG	8 cut(s)	258, 288, 897, 898, 1298, 1618, 1624, 1798
BseGI	GGATG	5 cut(s)	528, 1177, 1201, 1219, 1309
BseLI	CCNNNNNNNGG	8 cut(s)	55, 289, 505, 658, 1323, 1324, 1472, 1693
BseMI	GCAATG	1 cut(s)	784
BseMII	CTCAG	6 cut(s)	139, 148, 250, 812, 872, 1519
BseNI	ACTGG	7 cut(s)	484, 929, 1280, 1294, 1467, 1519, 1663
BseRI	GAGGAG	4 cut(s)	33, 36, 49, 532
BseXI	GCAGC	5 cut(s)	534, 735, 1241, 1449, 1647
BsgI	GTGCAG	1 cut(s)	581
Bsh1236I	CGCG	2 cut(s)	1032, 1335
Bsh1285I	CGRYCG	2 cut(s)	181, 1267
BshFI	GGCC	9 cut(s)	241, 263, 293, 533, 538, 632, 1297, 1452, 1623
BshNI	GGYRCC	4 cut(s)	203, 347, 648, 1844
BsiEI	CGRYCG	2 cut(s)	181, 1267
BsiHKAI	GWGCWC	5 cut(s)	197, 270, 282, 383, 993
BsiHKCI	CYCGRG	1 cut(s)	1862
BslFI	GGGAC	4 cut(s)	101, 217, 435, 1105
BslI	CCNNNNNNNGG	8 cut(s)	55, 289, 505, 658, 1323, 1324, 1472, 1693
BsmAI	GTCTC	3 cut(s)	163, 370, 1764
BsmBI	CGTCTC	1 cut(s)	370
BsmFI	GGGAC	4 cut(s)	101, 217, 435, 1105
BsnI	GGCC	9 cut(s)	241, 263, 293, 533, 538, 632, 1297, 1452, 1623
Bso31I	GGTCTC	2 cut(s)	163, 1764
BsoBI	CYCGRG	1 cut(s)	1862
Bsp119I	TTCGAA	1 cut(s)	324
Bsp1286I	GDGCHC	5 cut(s)	197, 270, 282, 383, 993
Bsp143I	GATC	3 cut(s)	1174, 1234, 1330
Bsp1720I	GCTNAGC	1 cut(s)	125
BspANI	GGCC	9 cut(s)	241, 263, 293, 533, 538, 632, 1297, 1452, 1623
BspCNI	CTCAG	6 cut(s)	138, 147, 249, 811, 873, 1518
BspFNI	CGCG	2 cut(s)	1032, 1335
BspMAI	CTGCAG	1 cut(s)	1164
BspMI	ACCTGC	2 cut(s)	1153, 1167
BspT104I	TTCGAA	1 cut(s)	324
BspT107I	GGYRCC	4 cut(s)	203, 347, 648, 1844
BspTNI	GGTCTC	2 cut(s)	163, 1764
BsrDI	GCAATG	1 cut(s)	784
BsrFI	RCCGGY	1 cut(s)	550
BsrI	ACTGG	7 cut(s)	484, 929, 1280, 1294, 1467, 1519, 1663
BssAI	RCCGGY	1 cut(s)	550
BssECI	CCNNGG	8 cut(s)	258, 288, 897, 898, 1298, 1618, 1624, 1798
BssMI	GATC	3 cut(s)	1174, 1234, 1330
BssNI	GRCGYC	3 cut(s)	204, 249, 1845
BssT1I	CCWWGG	4 cut(s)	258, 1618, 1624, 1798
Bst2UI	CCWGG	6 cut(s)	290, 500, 535, 843, 899, 1299
Bst4CI	ACNGT	5 cut(s)	199, 364, 1081, 1265, 1542
Bst6I	CTCTTC	1 cut(s)	1401
BstACI	GRCGYC	3 cut(s)	204, 249, 1845
BstBAI	YACGTR	3 cut(s)	384, 1198, 1421
BstBI	TTCGAA	1 cut(s)	324
BstC8I	GCNNGC	8 cut(s)	50, 54, 101, 131, 390, 552, 1339, 1714
BstDEI	CTNAG	7 cut(s)	125, 134, 236, 798, 881, 1505, 1585
BstF5I	GGATG	5 cut(s)	528, 1177, 1201, 1219, 1309
BstFNI	CGCG	2 cut(s)	1032, 1335
BstH2I	RGCGCY	2 cut(s)	207, 1848
BstHHI	GCGC	4 cut(s)	206, 433, 1337, 1847
BstKTI	GATC	3 cut(s)	1177, 1237, 1333
BstMAI	GTCTC	3 cut(s)	163, 370, 1764
BstMBI	GATC	3 cut(s)	1174, 1234, 1330
BstMCI	CGRYCG	2 cut(s)	181, 1267
BstNI	CCWGG	6 cut(s)	290, 500, 535, 843, 899, 1299
BstNSI	RCATGY	1 cut(s)	56
BstSFI	CTRYAG	1 cut(s)	1160
BstUI	CGCG	2 cut(s)	1032, 1335
BstV1I	GCAGC	5 cut(s)	534, 735, 1241, 1449, 1647
BstV2I	GAAGAC	2 cut(s)	800, 1276
BstXI	CCANNNNNNTGG	2 cut(s)	451, 1625
Bsu36I	CCTNAGG	1 cut(s)	236
BsuRI	GGCC	9 cut(s)	241, 263, 293, 533, 538, 632, 1297, 1452, 1623
BtsCI	GGATG	5 cut(s)	528, 1177, 1201, 1219, 1309
BtsI	GCAGTG	1 cut(s)	1061
BtsIMutI	CAGTG	5 cut(s)	142, 1061, 1287, 1474, 1486
BveI	ACCTGC	2 cut(s)	1153, 1167
Cac8I	GCNNGC	8 cut(s)	50, 54, 101, 131, 390, 552, 1339, 1714
CaiI	CAGNNNCTG	1 cut(s)	935
CfoI	GCGC	4 cut(s)	206, 433, 1337, 1847
Cfr10I	RCCGGY	1 cut(s)	550
Cfr13I	GGNCC	9 cut(s)	118, 240, 454, 531, 631, 1119, 1295, 1490, 1805
CseI	GACGC	1 cut(s)	238
CsiI	ACCWGGT	1 cut(s)	841
Csp6I	GTAC	6 cut(s)	151, 649, 932, 1195, 1512, 1739
CviQI	GTAC	6 cut(s)	151, 649, 932, 1195, 1512, 1739
DdeI	CTNAG	7 cut(s)	125, 134, 236, 798, 881, 1505, 1585
DinI	GGCGCC	2 cut(s)	205, 1846
DpnI	GATC	3 cut(s)	1176, 1236, 1332
DpnII	GATC	3 cut(s)	1174, 1234, 1330
DrdI	GACNNNNNNGTC	1 cut(s)	116
DriI	GACNNNNNGTC	2 cut(s)	229, 801
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	2 cut(s)	291, 1450
Eam1104I	CTCTTC	1 cut(s)	1401
Eam1105I	GACNNNNNGTC	2 cut(s)	229, 801
EarI	CTCTTC	1 cut(s)	1401
EciI	GGCGGA	2 cut(s)	30, 410
Ecl136II	GAGCTC	2 cut(s)	268, 280
Eco130I	CCWWGG	4 cut(s)	258, 1618, 1624, 1798
Eco147I	AGGCCT	1 cut(s)	1623
Eco24I	GRGCYC	2 cut(s)	270, 282
Eco31I	GGTCTC	2 cut(s)	163, 1764
Eco47I	GGWCC	5 cut(s)	118, 454, 1119, 1490, 1805
Eco53kI	GAGCTC	2 cut(s)	268, 280
Eco57I	CTGAAG	2 cut(s)	1023, 1712
Eco72I	CACGTG	2 cut(s)	384, 1421
Eco81I	CCTNAGG	1 cut(s)	236
Eco88I	CYCGRG	1 cut(s)	1862
EcoICRI	GAGCTC	2 cut(s)	268, 280
EcoO109I	RGGNCCY	1 cut(s)	1119
EcoRII	CCWGG	6 cut(s)	288, 498, 533, 841, 897, 1297
EcoT14I	CCWWGG	4 cut(s)	258, 1618, 1624, 1798
EcoT22I	ATGCAT	2 cut(s)	853, 1792
EcoT38I	GRGCYC	2 cut(s)	270, 282
EgeI	GGCGCC	2 cut(s)	205, 1846
EheI	GGCGCC	2 cut(s)	205, 1846
ErhI	CCWWGG	4 cut(s)	258, 1618, 1624, 1798
Esp3I	CGTCTC	1 cut(s)	370
FalI	AAGNNNNNCTT	2 cut(s)	305, 337
FaqI	GGGAC	4 cut(s)	101, 217, 435, 1105
FblI	GTMKAC	2 cut(s)	252, 318
FokI	GGATG	5 cut(s)	535, 1184, 1188, 1226, 1316
FriOI	GRGCYC	2 cut(s)	270, 282
FspBI	CTAG	2 cut(s)	609, 1851
GlaI	GCGC	4 cut(s)	205, 432, 1336, 1846
GsuI	CTGGAG	2 cut(s)	254, 467
HaeII	RGCGCY	2 cut(s)	207, 1848
HaeIII	GGCC	9 cut(s)	241, 263, 293, 533, 538, 632, 1297, 1452, 1623
HgaI	GACGC	1 cut(s)	238
HhaI	GCGC	4 cut(s)	206, 433, 1337, 1847
Hin1I	GRCGYC	3 cut(s)	204, 249, 1845
Hin6I	GCGC	4 cut(s)	204, 431, 1335, 1845
HinP1I	GCGC	4 cut(s)	204, 431, 1335, 1845
HincII	GTYRAC	3 cut(s)	319, 685, 1615
HindII	GTYRAC	3 cut(s)	319, 685, 1615
HindIII	AAGCTT	2 cut(s)	770, 1187
HinfI	GANTC	8 cut(s)	80, 89, 625, 637, 796, 802, 925, 1276
HphI	GGTGA	5 cut(s)	352, 595, 613, 1604, 1847
Hpy166II	GTNNAC	6 cut(s)	253, 319, 372, 685, 1222, 1615
Hpy188I	TCNGA	6 cut(s)	163, 223, 801, 882, 1098, 1377
Hpy188III	TCNNGA	7 cut(s)	145, 271, 310, 814, 1169, 1178, 1211
Hpy8I	GTNNAC	6 cut(s)	253, 319, 372, 685, 1222, 1615
Hpy99I	CGWCG	3 cut(s)	71, 203, 212
HpyAV	CCTTC	8 cut(s)	307, 320, 592, 944, 1339, 1687, 1700, 1784
HpyCH4III	ACNGT	5 cut(s)	199, 364, 1081, 1265, 1542
HpyCH4IV	ACGT	4 cut(s)	383, 417, 1197, 1420
HpyCH4V	TGCA	9 cut(s)	52, 411, 562, 577, 619, 851, 1162, 1201, 1790
HpyF3I	CTNAG	7 cut(s)	125, 134, 236, 798, 881, 1505, 1585
HpySE526I	ACGT	4 cut(s)	383, 417, 1197, 1420
Hsp92I	GRCGYC	3 cut(s)	204, 249, 1845
HspAI	GCGC	4 cut(s)	204, 431, 1335, 1845
KasI	GGCGCC	2 cut(s)	203, 1844
KpnI	GGTACC	1 cut(s)	652
KroI	GCCGGC	1 cut(s)	550
KroNI	GCCGGC	1 cut(s)	552
Kzo9I	GATC	3 cut(s)	1174, 1234, 1330
LmnI	GCTCC	5 cut(s)	192, 273, 285, 486, 1871
Lsp1109I	GCAGC	5 cut(s)	534, 735, 1241, 1449, 1647
LweI	GCATC	2 cut(s)	1210, 1777
MabI	ACCWGGT	1 cut(s)	841
MaeI	CTAG	2 cut(s)	609, 1851
MaeII	ACGT	4 cut(s)	383, 417, 1197, 1420
MaeIII	GTNAC	4 cut(s)	358, 1081, 1748, 1823
MalI	GATC	3 cut(s)	1176, 1236, 1332
MboI	GATC	3 cut(s)	1174, 1234, 1330
MboII	GAAGA	8 cut(s)	166, 634, 805, 955, 1276, 1418, 1496, 1642
MfeI	CAATTG	1 cut(s)	295
MhlI	GDGCHC	5 cut(s)	197, 270, 282, 383, 993
MlsI	TGGCCA	2 cut(s)	293, 1452
MluCI	AATT	6 cut(s)	295, 694, 821, 1271, 1363, 1382
MluNI	TGGCCA	2 cut(s)	293, 1452
Mly113I	GGCGCC	2 cut(s)	204, 1845
MlyI	GAGTC	5 cut(s)	83, 89, 790, 811, 1285
MmeI	TCCRAC	3 cut(s)	246, 1520, 1747
Mox20I	TGGCCA	2 cut(s)	293, 1452
Mph1103I	ATGCAT	2 cut(s)	853, 1792
MroNI	GCCGGC	1 cut(s)	550
MscI	TGGCCA	2 cut(s)	293, 1452
MseI	TTAA	7 cut(s)	414, 855, 890, 978, 1185, 1260, 1673
MslI	CAYNNNNRTG	4 cut(s)	416, 449, 920, 1755
Msp20I	TGGCCA	2 cut(s)	293, 1452
MspA1I	CMGCKG	2 cut(s)	1509, 1690
MunI	CAATTG	1 cut(s)	295
MvaI	CCWGG	6 cut(s)	290, 500, 535, 843, 899, 1299
MvnI	CGCG	2 cut(s)	1032, 1335
NaeI	GCCGGC	1 cut(s)	552
NarI	GGCGCC	2 cut(s)	204, 1845
NciI	CCSGG	7 cut(s)	105, 243, 458, 634, 764, 1071, 1247
NdeII	GATC	3 cut(s)	1174, 1234, 1330
NgoMIV	GCCGGC	1 cut(s)	550
NmeAIII	GCCGAG	2 cut(s)	289, 724
NmuCI	GTSAC	2 cut(s)	358, 1748
NsiI	ATGCAT	2 cut(s)	853, 1792
NspI	RCATGY	1 cut(s)	56
NspV	TTCGAA	1 cut(s)	324
OliI	CACNNNNGTG	1 cut(s)	1755
PaeI	GCATGC	1 cut(s)	56
PaeR7I	CTCGAG	1 cut(s)	1862
PasI	CCCWGGG	1 cut(s)	898
PceI	AGGCCT	1 cut(s)	1623
PcsI	WCGNNNNNNNCGW	5 cut(s)	75, 207, 315, 360, 380
PdiI	GCCGGC	1 cut(s)	552
PfeI	GAWTC	3 cut(s)	625, 637, 925
PflMI	CCANNNNNTGG	1 cut(s)	289
PfoI	TCCNGGA	1 cut(s)	762
PleI	GAGTC	5 cut(s)	83, 88, 790, 810, 1284
PluTI	GGCGCC	2 cut(s)	207, 1848
PmaCI	CACGTG	2 cut(s)	384, 1421
PmlI	CACGTG	2 cut(s)	384, 1421
PpsI	GAGTC	5 cut(s)	83, 88, 790, 810, 1284
Ppu21I	YACGTR	3 cut(s)	384, 1198, 1421
PpuMI	RGGWCCY	1 cut(s)	1119
Psp124BI	GAGCTC	2 cut(s)	270, 282
Psp5II	RGGWCCY	1 cut(s)	1119
Psp6I	CCWGG	6 cut(s)	288, 498, 533, 841, 897, 1297
PspCI	CACGTG	2 cut(s)	384, 1421
PspGI	CCWGG	6 cut(s)	288, 498, 533, 841, 897, 1297
PspPI	GGNCC	9 cut(s)	118, 240, 454, 531, 631, 1119, 1295, 1490, 1805
PspPPI	RGGWCCY	1 cut(s)	1119
PspXI	VCTCGAGB	1 cut(s)	1862
PstI	CTGCAG	1 cut(s)	1164
PstNI	CAGNNNCTG	1 cut(s)	935
PvuII	CAGCTG	1 cut(s)	1690
RsaI	GTAC	6 cut(s)	152, 650, 933, 1196, 1513, 1740
RsaNI	GTAC	6 cut(s)	151, 649, 932, 1195, 1512, 1739
RseI	CAYNNNNRTG	4 cut(s)	416, 449, 920, 1755
SacI	GAGCTC	2 cut(s)	270, 282
SalI	GTCGAC	1 cut(s)	317
SaqAI	TTAA	7 cut(s)	414, 855, 890, 978, 1185, 1260, 1673
Sau3AI	GATC	3 cut(s)	1174, 1234, 1330
Sau96I	GGNCC	9 cut(s)	118, 240, 454, 531, 631, 1119, 1295, 1490, 1805
SbfI	CCTGCAGG	1 cut(s)	1164
SchI	GAGTC	5 cut(s)	83, 89, 790, 811, 1285
SdaI	CCTGCAGG	1 cut(s)	1164
SduI	GDGCHC	5 cut(s)	197, 270, 282, 383, 993
SexAI	ACCWGGT	1 cut(s)	841
SfaNI	GCATC	2 cut(s)	1210, 1777
SfcI	CTRYAG	1 cut(s)	1160
SfoI	GGCGCC	2 cut(s)	205, 1846
Sfr274I	CTCGAG	1 cut(s)	1862
SfuI	TTCGAA	1 cut(s)	324
SinI	GGWCC	5 cut(s)	118, 454, 1119, 1490, 1805
SlaI	CTCGAG	1 cut(s)	1862
SmiMI	CAYNNNNRTG	4 cut(s)	416, 449, 920, 1755
SmlI	CTYRAG	4 cut(s)	641, 1178, 1190, 1862
SmoI	CTYRAG	4 cut(s)	641, 1178, 1190, 1862
SphI	GCATGC	1 cut(s)	56
Sse8387I	CCTGCAGG	1 cut(s)	1164
Sse9I	AATT	6 cut(s)	295, 694, 821, 1271, 1363, 1382
SseBI	AGGCCT	1 cut(s)	1623
SspDI	GGCGCC	2 cut(s)	203, 1844
SspMI	CTAG	2 cut(s)	609, 1851
SstI	GAGCTC	2 cut(s)	270, 282
StuI	AGGCCT	1 cut(s)	1623
StyI	CCWWGG	4 cut(s)	258, 1618, 1624, 1798
TaaI	ACNGT	5 cut(s)	199, 364, 1081, 1265, 1542
TaiI	ACGT	4 cut(s)	386, 420, 1200, 1423
TaqI	TCGA	7 cut(s)	177, 309, 318, 324, 838, 1267, 1863
TaqII	GACCGA	1 cut(s)	482
TasI	AATT	6 cut(s)	295, 694, 821, 1271, 1363, 1382
TatI	WGTACW	2 cut(s)	150, 1738
TauI	GCSGC	8 cut(s)	6, 9, 12, 15, 59, 249, 395, 1850
TfiI	GAWTC	3 cut(s)	625, 637, 925
Tru1I	TTAA	7 cut(s)	414, 855, 890, 978, 1185, 1260, 1673
Tru9I	TTAA	7 cut(s)	414, 855, 890, 978, 1185, 1260, 1673
TscAI	CASTG	5 cut(s)	142, 1068, 1294, 1474, 1486
TseFI	GTSAC	2 cut(s)	358, 1748
TseI	GCWGC	5 cut(s)	547, 748, 1254, 1462, 1635
Tsp45I	GTSAC	2 cut(s)	358, 1748
TspDTI	ATGAA	6 cut(s)	963, 1323, 1358, 1440, 1733, 1907
TspGWI	ACGGA	3 cut(s)	389, 1028, 1122
TspRI	CASTG	5 cut(s)	142, 1068, 1294, 1474, 1486
Van91I	CCANNNNNTGG	1 cut(s)	289
VpaK11BI	GGWCC	5 cut(s)	118, 454, 1119, 1490, 1805
XapI	RAATTY	3 cut(s)	694, 1363, 1382
XceI	RCATGY	1 cut(s)	56
XcmI	CCANNNNNNNNNTGG	1 cut(s)	223
XhoI	CTCGAG	1 cut(s)	1862
XmiI	GTMKAC	2 cut(s)	252, 318
XspI	CTAG	2 cut(s)	609, 1851
Zsp2I	ATGCAT	2 cut(s)	853, 1792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.