Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007069.1

Orthogroup ID

OG0004162

Physical Location & Seq

Genomic Coordinates Forward (+)

58939 .. 66546

Gene Structure 7608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007069.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

atgttggccgctgcgccgcccaggacctaccgcacccccaccactctcacttcctcctcctcctcctcctccgctcgcaaattagcctcgccctcctccgccgctacagccaccaacaacacccgccccctaatcgtcaaatgctgcgccgtctctccctcctcctcctcctcctcgcccctttctcaaaaccctaaaccctctccgaatctcctccaaaacgtcgccaaaaccgtcgccggcgtcaccaccgtcaccctcgtcttgaacttgagcaatttccccgccttcctcggaggcggcggtggcaattccggcggcggaggcggaggcggtggaggaggaggtgatggttcgggcggcggcggtttttggaggaggctgttcgggccgcagctggtggcgaatgccgacgagccacagtcgcaggagtgggactctcacggattgccggccaacattgtggtccagctcaacaagctcagtggcttcaagaaatacaaggtgtccgagatcttgttcttcgatcggaggcggtggagcaccgtcgggaccgaggactccttctttgaaatggtctcccttagacccggcggagtctacaccaaggcccagctccagaaagagctcgagaccctggccaattgcggaatgttcgagaaggtcgatttggaagggaagaccaaccccgacggcaccctcggcgtcaccatttccttcactgagagcacgtggcagtcggcggacaagttccggtgtatcaacgtgggcctgatggcgcagtccaagcccatcgaaatggacccggacatgactgataaggagaagatggagtatttcaggaaccaggagaaggattacaagaggaggattgagagggccaggccgtgcttgttgccggctccggtgcagagggaggtgttgctcatgttgagagagcaagggaaggtgagtgctaggctgctgcagaagattcgggaccgggttcagaaatggtaccaagatgagggatacgcgtgtgctcaagttgtcaatttcgggaatttgaacaccaaagaggttgtgtgtgaagtggtggaaggtgatatcacacagctggttattcagtttcaggataagcttggcaattttgtggaagggaacactcagattcctgtggtgaagagagaattgcccaaacagctccgaccaggttatgtctttaatatagaagcagggaaacaagctctgaggaacataaactccctggcattgttttcaaacattgaagtgaatccacgaccggatgagaagaatgaaggagggataattgttgaaataaagcttaaagaactagaacaaaagaccgccgaagtcagcacggaatggagcattgttcctggacgtggtggttatcccactttggcttcactgcagcctggtgggacagttacatttgaacatcgaaatctcaatgggttgaataggtctattctcggttcagtaaccaccagcaacttctacaaccctcaggatgatcttgcttttaagcttgagtatgtgcatccatatctggatggtgtgtacaatccccgcaatcgctctcttcgcgtaagctgcttcaacagtcgaaaattgagtccagtctttactggtgggccaggggctgatgaagtcccccctatatgggttgaccgagcgggcatgaaggctaatataacagagaatttcaaccgtcagagcaaattcacttatggacttgtaatggaagagataacaacacgtgatgaacgcagccatatctgttcaaatggccaaagagtgttgcccagtggtggagtcagtgaagatggacctccaacaactctgagtggtacgggcattgatcgtgtggcatttttacagtcaaatatcacacgtgataacaccaagttcgtgaatggaactatagttggtgagaggaatgtgtttcaggttgaccaaggccttggcgtcggcagcaagtttccattcttcaaccgccaccagctaacgttaacaagatttttccagctgaaggaagtggaggaaggtgccggcaaaccaccaccacctgtccttgtacttcatggtcactatggtggctgtgttggagaccttccaagttatgatgcatttactcttggaggtccatattcggtgagaggttacaacatgggtgaaataggcgctgccaggcaaatccttgagcttgcagctgagctacggataccagtaaaggggacacatgtatatgcatttgcagagcatggcaatgatctcggaagttcaaaggatgtcaagggtaacccgacagaggtatacaggcgagtgggtcatgggtcatcatatggtgttggtgtcaagttaggtctagtaagagcagaatatgctgtggatcacaactcaggctcaggttcagtattcttccgatttggaagggccaatgttacatctgatgatgaggtggaagaagggtctttgggggcagaggaaatgggttatgctgaagagcctatttttgtggacttggatgagttaagtgatgtgctcaatgaagatagaggacatgcgccaactgttgatgatgttgaggcatccatgactcaggtagaagtggaaagagcaaacaaaagaagaaaggagaaaggcaaagatgtggttcaagaagaaaataatccacctgcaaagaagaataagggcagaaaaaggcctgaggtgcgaaggagatattcttcaaggtctggaggtgagagttcaagaggccactcggttcctgatgtggatgtctcctctgaaagcacaacagactcagaggacccggattttgatggcatagtcgattcagattatgaactggatagtgaagatgatggtgtgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

959

Amino Acids

104.73

Weight (kDa)

5.78

Isoelectric Point (pI)

49.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46740 AT4G09080 AT4G09080 AT4G09080
fragaria_vesca	FvH4_3g28760 FvH4_3g28760 FvH4_3g28760 FvH4_5g29410
malus_domestica	MD03G1086500.v1.1 MD11G1095600.v1.1
prunus_persica	Prupe.6G071100_v2.0.a1
pyrus_communis	pycom03g06860 pycom11g08100 pycom11g08110
rosa_chinensis	RchiOBHm_Chr5g0052291 RchiOBHm_Chr7g0222311
rosa_laevigata	RLG00000002071 RLG00000034828
rosa_multiflora	Rmu_sc0007069.1_g000009 Rmu_sc0028377.1_g000001 Rmu_sc0032875.1_g000001 Rmu_sc0032876.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028120 Rroxscaffold_3G00237120
rosa_rugosa	Rorug05G0273100 Rorug07G0207600
rosa_samantha	Rh5CG382000 Rh5DG371900 Rh7AG349900 Rh7DG346100
rosa_wichuraiana	Rw5G032630 Rw5G032670 Rw7G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2689
Acc36I	ACCTGC	1 cut(s)	2689
Acc65I	GGTACC	1 cut(s)	996
AccB1I	GGYRCC	3 cut(s)	695, 996, 2051
AccBSI	CCGCTC	2 cut(s)	74, 1679
AccI	GTMKAC	2 cut(s)	600, 2319
AccII	CGCG	2 cut(s)	1016, 1590
AclI	AACGTT	1 cut(s)	2012
AclWI	GGATC	1 cut(s)	2403
AcoI	YGGCCR	4 cut(s)	6, 453, 639, 1792
AcsI	RAATTY	3 cut(s)	1042, 1705, 1724
AcuI	CTGAAG	2 cut(s)	2054, 2526
AcvI	CACGTG	3 cut(s)	732, 1763, 1898
AcyI	GRCGYC	3 cut(s)	243, 705, 1971
AfaI	GTAC	4 cut(s)	998, 1565, 1855, 2082
AfiI	CCNNNNNNNGG	9 cut(s)	853, 1006, 1385, 1665, 1666, 1814, 2035, 2237, 2314
AflIII	ACRYGT	4 cut(s)	1014, 1760, 1895, 2245
AjiI	CACGTC	1 cut(s)	1385
AjuI	GAANNNNNNNTTGG	2 cut(s)	653, 685
AleI	CACNNNNGTG	1 cut(s)	2097
AloI	GAACNNNNNNTCC	2 cut(s)	1226, 1258
Alw21I	GWGCWC	5 cut(s)	545, 630, 731, 1024, 2550
Alw26I	GTCTC	5 cut(s)	157, 583, 626, 2106, 2791
AlwI	GGATC	1 cut(s)	2403
AlwNI	CAGNNNCTG	1 cut(s)	1646
Ama87I	CYCGRG	1 cut(s)	629
ApoI	RAATTY	3 cut(s)	1042, 1705, 1724
ArsI	GACNNNNNNTTYG	6 cut(s)	551, 583, 1603, 1635, 2807, 2839
Asp718I	GGTACC	1 cut(s)	996
AspLEI	GCGC	5 cut(s)	16, 149, 781, 2189, 2572
AsuC2I	CCSGG	4 cut(s)	591, 806, 983, 2819
AvaI	CYCGRG	1 cut(s)	629
AvaII	GGWCC	8 cut(s)	24, 466, 552, 802, 979, 1832, 2147, 2815
AxyI	CCTNAGG	2 cut(s)	1509, 2712
BaeI	ACNNNNGTAYC	2 cut(s)	1003, 1036
BalI	TGGCCA	2 cut(s)	641, 1794
BanI	GGYRCC	3 cut(s)	695, 996, 2051
BanII	GRGCYC	1 cut(s)	630
BbrPI	CACGTG	3 cut(s)	732, 1763, 1898
BbsI	GAAGAC	1 cut(s)	686
Bbv12I	GWGCWC	5 cut(s)	545, 630, 731, 1024, 2550
BccI	CCATC	8 cut(s)	344, 769, 800, 823, 1550, 1823, 2822, 2864
BceAI	ACGGC	3 cut(s)	134, 709, 871
BcgI	CGANNNNNNTGC	4 cut(s)	956, 990, 2260, 2294
BciVI	GTATCC	2 cut(s)	1004, 2220
BcnI	CCSGG	4 cut(s)	591, 806, 983, 2819
BcoDI	GTCTC	5 cut(s)	157, 583, 626, 2106, 2791
BfaI	CTAG	3 cut(s)	957, 1334, 2372
BfmI	CTRYAG	4 cut(s)	105, 965, 1412, 1926
BfoI	RGCGCY	1 cut(s)	2190
BfuAI	ACCTGC	1 cut(s)	2689
BfuI	GTATCC	2 cut(s)	1004, 2220
BglII	AGATCT	1 cut(s)	513
BlpI	GCTNAGC	1 cut(s)	2217
Bme18I	GGWCC	8 cut(s)	24, 466, 552, 802, 979, 1832, 2147, 2815
BmeT110I	CYCGRG	1 cut(s)	629
BmgBI	CACGTC	1 cut(s)	1385
BmrI	ACTGGG	1 cut(s)	1803
BmsI	GCATC	3 cut(s)	1552, 2119, 2603
BmuI	ACTGGG	1 cut(s)	1803
BpiI	GAAGAC	1 cut(s)	686
BplI	GAGNNNNNCTC	2 cut(s)	422, 454
BpmI	CTGGAG	2 cut(s)	602, 2763
Bpu10I	CCTNAGC	1 cut(s)	2410
Bpu1102I	GCTNAGC	1 cut(s)	2217
BpuEI	CTTGAG	4 cut(s)	292, 1008, 1553, 2225
BpuMI	CCSGG	4 cut(s)	591, 806, 983, 2819
BsaAI	YACGTR	3 cut(s)	732, 1763, 1898
BsaHI	GRCGYC	3 cut(s)	243, 705, 1971
BsaI	GGTCTC	3 cut(s)	583, 626, 2106
BsaWI	WCCGGW	3 cut(s)	753, 904, 1282
BsaXI	ACNNNNNCTCC	2 cut(s)	1226, 1256
Bsc4I	CCNNNNNNNGG	9 cut(s)	853, 1006, 1385, 1665, 1666, 1814, 2035, 2237, 2314
Bse118I	RCCGGY	4 cut(s)	239, 451, 898, 2054
Bse1I	ACTGG	5 cut(s)	1622, 1636, 1809, 2231, 2859
Bse21I	CCTNAGG	2 cut(s)	1509, 2712
Bse3DI	GCAATG	1 cut(s)	2278
BseGI	GGATG	8 cut(s)	1291, 1519, 1543, 1561, 2299, 2536, 2594, 2788
BseLI	CCNNNNNNNGG	9 cut(s)	853, 1006, 1385, 1665, 1666, 1814, 2035, 2237, 2314
BseMI	GCAATG	1 cut(s)	2278
BseNI	ACTGG	5 cut(s)	1622, 1636, 1809, 2231, 2859
BseYI	CCCAGC	1 cut(s)	612
BsgI	GTGCAG	1 cut(s)	929
Bsh1236I	CGCG	2 cut(s)	1016, 1590
Bsh1285I	CGRYCG	2 cut(s)	529, 1283
BshNI	GGYRCC	3 cut(s)	695, 996, 2051
BsiEI	CGRYCG	2 cut(s)	529, 1283
BsiHKAI	GWGCWC	5 cut(s)	545, 630, 731, 1024, 2550
BsiHKCI	CYCGRG	1 cut(s)	629
BslFI	GGGAC	6 cut(s)	449, 565, 992, 1438, 1640, 2254
BslI	CCNNNNNNNGG	9 cut(s)	853, 1006, 1385, 1665, 1666, 1814, 2035, 2237, 2314
BsmAI	GTCTC	5 cut(s)	157, 583, 626, 2106, 2791
BsmBI	CGTCTC	1 cut(s)	157
BsmFI	GGGAC	6 cut(s)	449, 565, 992, 1438, 1640, 2254
BsmI	GAATGC	1 cut(s)	412
Bso31I	GGTCTC	3 cut(s)	583, 626, 2106
BsoBI	CYCGRG	1 cut(s)	629
Bsp1286I	GDGCHC	5 cut(s)	545, 630, 731, 1024, 2550
Bsp1407I	TGTACA	1 cut(s)	1563
Bsp143I	GATC	6 cut(s)	513, 526, 1516, 1864, 2275, 2395
Bsp1720I	GCTNAGC	1 cut(s)	2217
BspFNI	CGCG	2 cut(s)	1016, 1590
BspMAI	CTGCAG	2 cut(s)	969, 1416
BspMI	ACCTGC	1 cut(s)	2689
BspPI	GGATC	1 cut(s)	2403
BspQI	GCTCTTC	1 cut(s)	2502
BspT107I	GGYRCC	3 cut(s)	695, 996, 2051
BspTNI	GGTCTC	3 cut(s)	583, 626, 2106
BsrBI	CCGCTC	2 cut(s)	74, 1679
BsrDI	GCAATG	1 cut(s)	2278
BsrFI	RCCGGY	4 cut(s)	239, 451, 898, 2054
BsrGI	TGTACA	1 cut(s)	1563
BsrI	ACTGG	5 cut(s)	1622, 1636, 1809, 2231, 2859
BssAI	RCCGGY	4 cut(s)	239, 451, 898, 2054
BssMI	GATC	6 cut(s)	513, 526, 1516, 1864, 2275, 2395
BssNAI	GTATAC	1 cut(s)	2320
BssNI	GRCGYC	3 cut(s)	243, 705, 1971
BssT1I	CCWWGG	3 cut(s)	606, 1960, 1966
Bst1107I	GTATAC	1 cut(s)	2320
Bst4CI	ACNGT	9 cut(s)	235, 253, 423, 547, 1429, 1607, 1715, 1884, 2578
Bst6I	CTCTTC	4 cut(s)	1157, 1590, 1743, 2502
BstACI	GRCGYC	3 cut(s)	243, 705, 1971
BstAPI	GCANNNNNTGC	1 cut(s)	2387
BstAUI	TGTACA	1 cut(s)	1563
BstBAI	YACGTR	3 cut(s)	732, 1763, 1898
BstC8I	GCNNGC	7 cut(s)	76, 241, 453, 900, 1681, 2056, 2211
BstEII	GGTNACC	1 cut(s)	2303
BstF5I	GGATG	8 cut(s)	1291, 1519, 1543, 1561, 2299, 2536, 2594, 2788
BstFNI	CGCG	2 cut(s)	1016, 1590
BstH2I	RGCGCY	1 cut(s)	2190
BstHHI	GCGC	5 cut(s)	16, 149, 781, 2189, 2572
BstKTI	GATC	6 cut(s)	516, 529, 1519, 1867, 2278, 2398
BstMAI	GTCTC	5 cut(s)	157, 583, 626, 2106, 2791
BstMBI	GATC	6 cut(s)	513, 526, 1516, 1864, 2275, 2395
BstMCI	CGRYCG	2 cut(s)	529, 1283
BstNSI	RCATGY	2 cut(s)	2249, 2570
BstPI	GGTNACC	1 cut(s)	2303
BstSFI	CTRYAG	4 cut(s)	105, 965, 1412, 1926
BstUI	CGCG	2 cut(s)	1016, 1590
BstV2I	GAAGAC	1 cut(s)	686
BstX2I	RGATCY	1 cut(s)	513
BstXI	CCANNNNNNTGG	3 cut(s)	463, 799, 1967
BstYI	RGATCY	1 cut(s)	513
BstZ17I	GTATAC	1 cut(s)	2320
Bsu36I	CCTNAGG	2 cut(s)	1509, 2712
BsuI	GTATCC	2 cut(s)	1004, 2220
BtrI	CACGTC	1 cut(s)	1385
BtsCI	GGATG	8 cut(s)	1291, 1519, 1543, 1561, 2299, 2536, 2594, 2788
BtsI	GCAGTG	1 cut(s)	1409
BtsIMutI	CAGTG	5 cut(s)	490, 720, 1409, 1816, 1828
BveI	ACCTGC	1 cut(s)	2689
Cac8I	GCNNGC	7 cut(s)	76, 241, 453, 900, 1681, 2056, 2211
CaiI	CAGNNNCTG	1 cut(s)	1646
CfoI	GCGC	5 cut(s)	16, 149, 781, 2189, 2572
Cfr10I	RCCGGY	4 cut(s)	239, 451, 898, 2054
CseI	GACGC	3 cut(s)	232, 694, 1960
CsiI	ACCWGGT	1 cut(s)	1189
Csp6I	GTAC	4 cut(s)	997, 1564, 1854, 2081
CspCI	CAANNNNNGTGG	2 cut(s)	466, 501
CviQI	GTAC	4 cut(s)	997, 1564, 1854, 2081
DpnI	GATC	6 cut(s)	515, 528, 1518, 1866, 2277, 2397
DpnII	GATC	6 cut(s)	513, 526, 1516, 1864, 2275, 2395
EaeI	YGGCCR	4 cut(s)	6, 453, 639, 1792
Eam1104I	CTCTTC	4 cut(s)	1157, 1590, 1743, 2502
EarI	CTCTTC	4 cut(s)	1157, 1590, 1743, 2502
EciI	GGCGGA	5 cut(s)	88, 336, 342, 609, 758
Ecl136II	GAGCTC	1 cut(s)	628
Eco130I	CCWWGG	3 cut(s)	606, 1960, 1966
Eco147I	AGGCCT	2 cut(s)	1965, 2710
Eco24I	GRGCYC	1 cut(s)	630
Eco31I	GGTCTC	3 cut(s)	583, 626, 2106
Eco32I	GATATC	1 cut(s)	1087
Eco47I	GGWCC	8 cut(s)	24, 466, 552, 802, 979, 1832, 2147, 2815
Eco53kI	GAGCTC	1 cut(s)	628
Eco57I	CTGAAG	2 cut(s)	2054, 2526
Eco72I	CACGTG	3 cut(s)	732, 1763, 1898
Eco81I	CCTNAGG	2 cut(s)	1509, 2712
Eco88I	CYCGRG	1 cut(s)	629
Eco91I	GGTNACC	1 cut(s)	2303
EcoICRI	GAGCTC	1 cut(s)	628
EcoO109I	RGGNCCY	2 cut(s)	24, 2815
EcoO65I	GGTNACC	1 cut(s)	2303
EcoRV	GATATC	1 cut(s)	1087
EcoT14I	CCWWGG	3 cut(s)	606, 1960, 1966
EcoT22I	ATGCAT	2 cut(s)	2134, 2257
EcoT38I	GRGCYC	1 cut(s)	630
ErhI	CCWWGG	3 cut(s)	606, 1960, 1966
Esp3I	CGTCTC	1 cut(s)	157
FaqI	GGGAC	6 cut(s)	449, 565, 992, 1438, 1640, 2254
FauI	CCCGC	4 cut(s)	131, 292, 1580, 1672
FauNDI	CATATG	1 cut(s)	2347
FblI	GTMKAC	2 cut(s)	600, 2319
FokI	GGATG	8 cut(s)	1298, 1526, 1530, 1568, 2306, 2543, 2581, 2795
FriOI	GRGCYC	1 cut(s)	630
FspBI	CTAG	3 cut(s)	957, 1334, 2372
GlaI	GCGC	5 cut(s)	15, 148, 780, 2188, 2571
GsaI	CCCAGC	1 cut(s)	616
GsuI	CTGGAG	2 cut(s)	602, 2763
HaeII	RGCGCY	1 cut(s)	2190
HgaI	GACGC	3 cut(s)	232, 694, 1960
HhaI	GCGC	5 cut(s)	16, 149, 781, 2189, 2572
Hin1I	GRCGYC	3 cut(s)	243, 705, 1971
Hin6I	GCGC	5 cut(s)	14, 147, 779, 2187, 2570
HinP1I	GCGC	5 cut(s)	14, 147, 779, 2187, 2570
HincII	GTYRAC	3 cut(s)	1672, 1957, 2016
HindII	GTYRAC	3 cut(s)	1672, 1957, 2016
HindIII	AAGCTT	3 cut(s)	1118, 1322, 1529
HpaI	GTTAAC	1 cut(s)	2016
Hpy166II	GTNNAC	7 cut(s)	601, 1564, 1672, 1957, 2016, 2320, 2524
Hpy8I	GTNNAC	7 cut(s)	601, 1564, 1672, 1957, 2016, 2320, 2524
Hpy99I	CGWCG	6 cut(s)	227, 239, 416, 551, 695, 1976
HpyCH4III	ACNGT	9 cut(s)	235, 253, 423, 547, 1429, 1607, 1715, 1884, 2578
HpyCH4IV	ACGT	7 cut(s)	222, 731, 765, 1384, 1762, 1897, 2012
HpyCH4V	TGCA	9 cut(s)	910, 967, 1414, 1543, 2132, 2213, 2255, 2261, 2684
HpySE526I	ACGT	7 cut(s)	222, 731, 765, 1384, 1762, 1897, 2012
Hsp92I	GRCGYC	3 cut(s)	243, 705, 1971
HspAI	GCGC	5 cut(s)	14, 147, 779, 2187, 2570
KpnI	GGTACC	1 cut(s)	1000
KroI	GCCGGC	4 cut(s)	239, 451, 898, 2054
KroNI	GCCGGC	4 cut(s)	241, 453, 900, 2056
KspAI	GTTAAC	1 cut(s)	2016
Kzo9I	GATC	6 cut(s)	513, 526, 1516, 1864, 2275, 2395
LguI	GCTCTTC	1 cut(s)	2502
LmnI	GCTCC	5 cut(s)	540, 621, 907, 1188, 1368
LweI	GCATC	3 cut(s)	1552, 2119, 2603
MabI	ACCWGGT	1 cut(s)	1189
MaeI	CTAG	3 cut(s)	957, 1334, 2372
MaeII	ACGT	7 cut(s)	222, 731, 765, 1384, 1762, 1897, 2012
MaeIII	GTNAC	9 cut(s)	244, 253, 706, 1429, 1483, 2090, 2165, 2303, 2446
MalI	GATC	6 cut(s)	515, 528, 1518, 1866, 2277, 2397
MbiI	CCGCTC	2 cut(s)	74, 1679
MboI	GATC	6 cut(s)	513, 526, 1516, 1864, 2275, 2395
MfeI	CAATTG	1 cut(s)	643
MflI	RGATCY	1 cut(s)	513
MhlI	GDGCHC	5 cut(s)	545, 630, 731, 1024, 2550
MlsI	TGGCCA	2 cut(s)	641, 1794
MluI	ACGCGT	1 cut(s)	1014
MluNI	TGGCCA	2 cut(s)	641, 1794
MlyI	GAGTC	7 cut(s)	431, 554, 606, 1627, 1827, 2596, 2801
MmeI	TCCRAC	3 cut(s)	1210, 1862, 2089
Mox20I	TGGCCA	2 cut(s)	641, 1794
Mph1103I	ATGCAT	2 cut(s)	2134, 2257
MreI	CGCCGGCG	1 cut(s)	239
MroNI	GCCGGC	4 cut(s)	239, 451, 898, 2054
MscI	TGGCCA	2 cut(s)	641, 1794
MseI	TTAA	5 cut(s)	1203, 1326, 1527, 2015, 2537
MslI	CAYNNNNRTG	5 cut(s)	797, 1268, 2097, 2250, 2271
Msp20I	TGGCCA	2 cut(s)	641, 1794
MspA1I	CMGCKG	5 cut(s)	11, 397, 1096, 2032, 2216
MunI	CAATTG	1 cut(s)	643
Mva1269I	GAATGC	1 cut(s)	412
MvnI	CGCG	2 cut(s)	1016, 1590
NaeI	GCCGGC	4 cut(s)	241, 453, 900, 2056
NciI	CCSGG	4 cut(s)	591, 806, 983, 2819
NdeI	CATATG	1 cut(s)	2347
NdeII	GATC	6 cut(s)	513, 526, 1516, 1864, 2275, 2395
NgoMIV	GCCGGC	4 cut(s)	239, 451, 898, 2054
NmeAIII	GCCGAG	1 cut(s)	681
NmuCI	GTSAC	4 cut(s)	244, 253, 706, 2090
NsiI	ATGCAT	2 cut(s)	2134, 2257
NspI	RCATGY	2 cut(s)	2249, 2570
OliI	CACNNNNGTG	1 cut(s)	2097
PaeR7I	CTCGAG	1 cut(s)	629
PaqCI	CACCTGC	1 cut(s)	2689
PceI	AGGCCT	2 cut(s)	1965, 2710
PciI	ACATGT	1 cut(s)	2245
PciSI	GCTCTTC	1 cut(s)	2502
PcsI	WCGNNNNNNNCGW	2 cut(s)	231, 663
PctI	GAATGC	1 cut(s)	412
PdiI	GCCGGC	4 cut(s)	241, 453, 900, 2056
PfeI	GAWTC	5 cut(s)	208, 973, 1150, 1273, 2840
PfoI	TCCNGGA	1 cut(s)	1378
Ple19I	CGATCG	1 cut(s)	529
PleI	GAGTC	7 cut(s)	431, 554, 605, 1626, 1826, 2596, 2801
PmaCI	CACGTG	3 cut(s)	732, 1763, 1898
PmlI	CACGTG	3 cut(s)	732, 1763, 1898
PpsI	GAGTC	7 cut(s)	431, 554, 605, 1626, 1826, 2596, 2801
Ppu21I	YACGTR	3 cut(s)	732, 1763, 1898
PpuMI	RGGWCCY	2 cut(s)	24, 2815
PscI	ACATGT	1 cut(s)	2245
Psp124BI	GAGCTC	1 cut(s)	630
Psp1406I	AACGTT	1 cut(s)	2012
Psp5II	RGGWCCY	2 cut(s)	24, 2815
PspCI	CACGTG	3 cut(s)	732, 1763, 1898
PspEI	GGTNACC	1 cut(s)	2303
PspFI	CCCAGC	1 cut(s)	612
PspPPI	RGGWCCY	2 cut(s)	24, 2815
PstI	CTGCAG	2 cut(s)	969, 1416
PstNI	CAGNNNCTG	1 cut(s)	1646
PsuI	RGATCY	1 cut(s)	513
PvuI	CGATCG	1 cut(s)	529
PvuII	CAGCTG	4 cut(s)	397, 1096, 2032, 2216
RsaI	GTAC	4 cut(s)	998, 1565, 1855, 2082
RsaNI	GTAC	4 cut(s)	997, 1564, 1854, 2081
RseI	CAYNNNNRTG	5 cut(s)	797, 1268, 2097, 2250, 2271
SacI	GAGCTC	1 cut(s)	630
SapI	GCTCTTC	1 cut(s)	2502
SaqAI	TTAA	5 cut(s)	1203, 1326, 1527, 2015, 2537
Sau3AI	GATC	6 cut(s)	513, 526, 1516, 1864, 2275, 2395
SchI	GAGTC	7 cut(s)	431, 554, 606, 1627, 1827, 2596, 2801
SduI	GDGCHC	5 cut(s)	545, 630, 731, 1024, 2550
SexAI	ACCWGGT	1 cut(s)	1189
SfaNI	GCATC	3 cut(s)	1552, 2119, 2603
SfcI	CTRYAG	4 cut(s)	105, 965, 1412, 1926
Sfr274I	CTCGAG	1 cut(s)	629
SgrAI	CRCCGGYG	1 cut(s)	239
SinI	GGWCC	8 cut(s)	24, 466, 552, 802, 979, 1832, 2147, 2815
SlaI	CTCGAG	1 cut(s)	629
SmiMI	CAYNNNNRTG	5 cut(s)	797, 1268, 2097, 2250, 2271
SmlI	CTYRAG	5 cut(s)	271, 629, 1023, 1532, 2204
SmoI	CTYRAG	5 cut(s)	271, 629, 1023, 1532, 2204
SseBI	AGGCCT	2 cut(s)	1965, 2710
SspMI	CTAG	3 cut(s)	957, 1334, 2372
SstI	GAGCTC	1 cut(s)	630
StuI	AGGCCT	2 cut(s)	1965, 2710
StyI	CCWWGG	3 cut(s)	606, 1960, 1966
TaaI	ACNGT	9 cut(s)	235, 253, 423, 547, 1429, 1607, 1715, 1884, 2578
TaiI	ACGT	7 cut(s)	225, 734, 768, 1387, 1765, 1900, 2015
TaqI	TCGA	8 cut(s)	525, 630, 657, 666, 795, 1444, 1609, 2838
TaqII	GACCGA	2 cut(s)	569, 1689
TatI	WGTACW	2 cut(s)	1563, 2080
TauI	GCSGC	8 cut(s)	11, 19, 104, 303, 321, 363, 366, 394
TfiI	GAWTC	5 cut(s)	208, 973, 1150, 1273, 2840
Tru1I	TTAA	5 cut(s)	1203, 1326, 1527, 2015, 2537
Tru9I	TTAA	5 cut(s)	1203, 1326, 1527, 2015, 2537
TscAI	CASTG	5 cut(s)	490, 727, 1416, 1816, 1828
TseFI	GTSAC	4 cut(s)	244, 253, 706, 2090
Tsp45I	GTSAC	4 cut(s)	244, 253, 706, 2090
TspDTI	ATGAA	7 cut(s)	1311, 1665, 1700, 1782, 2075, 2568, 2865
TspGWI	ACGGA	3 cut(s)	459, 1376, 2239
TspRI	CASTG	5 cut(s)	490, 727, 1416, 1816, 1828
VpaK11BI	GGWCC	8 cut(s)	24, 466, 552, 802, 979, 1832, 2147, 2815
XapI	RAATTY	3 cut(s)	1042, 1705, 1724
XceI	RCATGY	2 cut(s)	2249, 2570
XhoI	CTCGAG	1 cut(s)	629
XmiI	GTMKAC	2 cut(s)	600, 2319
XspI	CTAG	3 cut(s)	957, 1334, 2372
Zsp2I	ATGCAT	2 cut(s)	2134, 2257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.