Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004162

Physical Location & Seq

Genomic Coordinates Forward (+)

55456238 .. 55461202

Gene Structure 4965 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034828

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGTTCGCAGCGTCCACCAGTATCTATACCCCCACCACCATCGCTCTCCTCCCTCCCTCCTCCTCTGATCGCAAGTTAGCTTCTTTATCCACCGCCACCAACAACAACACCCGCACCCGCAGTCGTCCAATCACCGAATGCCGAGTGTCCTCCTCCTCCTCCTCCTCCTCGTCCCTTCCTTTAAACCCTAAACCCTCCTCTTCCAACCACCTCCTCAAAAACCTCGCCAAAACATTCGCCGGCGCCACCACTGTCACCCTCATCCTGAACCTAACCAATTTCCCCGCCTTCATCGGCGGAGGCGGAGGAGGAGGTCATGGTTCCAATGGCGGCGCTGGCGGCTACGGAGGAGGAGGAGGGTTTTGGAGGAGGCTGTTTCGCCTGCATGCGGCGAAAGCCGACGAGCCGAACGAGTCGTGGGACTCTCACGGCTTGCCGGCCGACATTGTGGTTCAGCTCAGCAGGCTCAGCGGCTTCAAGAAGTACAAGGTCTCGGAGGTCTTGTTCTTCGACCGGAGGCGGTGGAGCACCGTCGGCGCCGACGACTCCATCTCCGACATGGTGTCCCTCAGGCCCGGCGGCGTCTACACCAAGGCCGAGCTCCAGAACGAGCTCCAATCCCTGGCCAATTGCGGAATGTTCGAGAAGGTCGACTTCGAAGGCAAGACCAACCCGGACGGCACCCTCGCCGTCACCGTCTCGTTCACGGAGAGCACGTGGCAGGCGGCGGAGAGGTTCCGGTGCATTAACGTGGGCCTGATGGCGCAGCCCAAGCCCATTGAGATTGACCAGGACATGACCGAGAGGGAGAAGCTCCAGTATTTCAGGAACCAGGAGAGGGATTACAAGAGGAGGATGGAGAGGGCCAGGCCGTGTTTGCTGCCGGCTTCGGTGCAGAGGGAGGTGTTGCAGATGGTGAGAGAACATGGGAAGGTGAGTGCTAGGGTGTTGCAGAAGATTCAGGCTCGGGTTCTCAAGTGGTACCAAGATGAGGGGTATCTGTGTGCCAATGTTGTCAACTTTGGGAATTTGAATACGAAGGAGGTTGTGTGTGAGGTGGTGGAGGGCGATATTACTCGGCTGGTTATTCAGTTCCGGGATAAGCTTGGCAATGTTGTAGAGGGGAAAACTCAGAGTCTTGTGGTCAAGAGAGAATTGCCCAAACAGCTTCGACCAGGTAATGCGTTTAACATAGAAGCAGGGAAACAAGCTCTGAGGAACTTAACCTCCCTGGGATTGTTTTCAAACATTGAAGTGAATCCAGTACCGGATGAGAAGAATGAAGGAGGGATAGTTGTTGAAATAAATCTTAAGGAACAAGAGCACAAGACTGCTGAAGTAAGCACGGAATGGAACATTGTTCGTGGACATGGAGGCTATCCCACTTTGGCTTCACTGCTACCCGGTGGAACTGTTACATTTCAACATCGGAATATCAAAGGATTGAATAGGTCTCTTATTGGTTCAGTAAGCAGTAGCAACCTTTACAACCCACAGCTTCAGGATGATCTTGAATTTAAGCTTGAGTACGCCCATCCATATCTGGATGGTCTGGACAATCCCCGCGATCGCACTCTCCGGGTAAGCTGCTTTAATGGTCGAAAATTGAGTCCAGTCTTCACTGGTGGGCCAGGGGATGATGAAGTTCCCCCTGTATGGGTTGATCGAGCTGGCATGAAGGCTAATATAACAGAGAATTTGAGCCGTCAGAGCAAATTCACTTATGGTCTTGTGATGGAAGAGATAACCACACGTGATGAACAAAATCATATATGTTCAAATGGCCAAAGAGTGTTGCCCAGTGGAGGTGTCAGTGAAGATGGACCTCCAACAACTCTCAGCGGTACTGGCATTGACCATGTGGCATTTTTACAGTCAAATATCACACATGACAACACCAAGTTTGTGAATGGAACCTTAGTTGGTGAGAGGAATGTGTTTCAGGTTGACCAAGGCCTTGGCATTGGCAGCAAGTTTCCATTCTTCAACCGCCACCAGTTATCATTAACAAGATTTTTCCAGCTGAAGGAAGTGGAGGAAGGTGCTGGCAAACCACCACCACCTGTTCTTGTACTTCATGGTCACTATGGTGGCTGTGTTGGAGACCTTCCAAGTTATGATGCATTTACCCTTGGGGGTCCATATTCTGTGAGAGGTTACAACATGGGTGAGATAGGTGCCGCTAGACATATCCTCGAGCTTGCAGCTGAGCTACGGATACCGGTTAAAGGTAAAAATGTATATGCATTTGTAGAACATGGCAATGATCTCGGAAGTTCGAAGGATGTCAAGGGTAACCCAACAGAGGTATACAGGCGAGTGGGTCATGGGTCATCATACGGTGTTGGTGTCAAGTTAGGTCCAGTAAGAGTGGAATATGTTGTGGATCACAACTCCGGCACAGGTTCAACATTCTTCCGATTTGGTGACCGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

813

Amino Acids

89.03

Weight (kDa)

8.71

Isoelectric Point (pI)

43.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POTRA1_3_Toc75	PF25282	146 - 237	1.2e-31	Toc75-like, POTRA domain
POTRA2_Toc75	PF25280	246 - 357	2.5e-55	Toc75-like, second POTRA domain
POTRA1_3_Toc75	PF25282	358 - 439	3.2e-25	Toc75-like, POTRA domain
Omp85	PF01103	478 - 795	1.3e-17	Omp85 superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46740 AT4G09080 AT4G09080 AT4G09080
fragaria_vesca	FvH4_3g28760 FvH4_3g28760 FvH4_3g28760 FvH4_5g29410
malus_domestica	MD03G1086500.v1.1 MD11G1095600.v1.1
prunus_persica	Prupe.6G071100_v2.0.a1
pyrus_communis	pycom03g06860 pycom11g08100 pycom11g08110
rosa_chinensis	RchiOBHm_Chr5g0052291 RchiOBHm_Chr7g0222311
rosa_laevigata	RLG00000002071 RLG00000034828
rosa_multiflora	Rmu_sc0007069.1_g000009 Rmu_sc0028377.1_g000001 Rmu_sc0032875.1_g000001 Rmu_sc0032876.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028120 Rroxscaffold_3G00237120
rosa_rugosa	Rorug05G0273100 Rorug07G0207600
rosa_samantha	Rh5CG382000 Rh5DG371900 Rh7AG349900 Rh7DG346100
rosa_wichuraiana	Rw5G032630 Rw5G032670 Rw7G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	981
AccB1I	GGYRCC	5 cut(s)	242, 536, 680, 981, 2177
AccB7I	CCANNNNNTGG	1 cut(s)	622
AccI	GTMKAC	3 cut(s)	585, 651, 2310
AccII	CGCG	1 cut(s)	1566
AclWI	GGATC	1 cut(s)	2394
AcoI	YGGCCR	3 cut(s)	438, 624, 1783
AcsI	RAATTY	4 cut(s)	1027, 1514, 1696, 1715
AcuI	CTGAAG	3 cut(s)	1356, 1484, 2045
AcvI	CACGTG	2 cut(s)	717, 1754
AcyI	GRCGYC	3 cut(s)	243, 537, 582
AfaI	GTAC	6 cut(s)	485, 983, 1266, 1529, 1846, 2073
AflII	CTTAAG	1 cut(s)	1310
AflIII	ACRYGT	1 cut(s)	1751
AgeI	ACCGGT	1 cut(s)	2221
AhdI	GACNNNNNGTC	1 cut(s)	562
AjnI	CCWGG	7 cut(s)	621, 789, 831, 866, 1174, 1230, 1630
AleI	CACNNNNGTG	1 cut(s)	2088
AloI	GAACNNNNNNTCC	4 cut(s)	488, 520, 1211, 1243
Alw21I	GWGCWC	5 cut(s)	530, 603, 615, 716, 1326
Alw26I	GTCTC	4 cut(s)	496, 703, 1458, 2097
AlwI	GGATC	1 cut(s)	2394
Ama87I	CYCGRG	2 cut(s)	966, 2195
ApeKI	GCWGC	6 cut(s)	8, 766, 880, 1587, 1968, 2204
ApoI	RAATTY	4 cut(s)	1027, 1514, 1696, 1715
ArsI	GACNNNNNNTTYG	2 cut(s)	1594, 1626
AsiGI	ACCGGT	1 cut(s)	2221
AsiSI	GCGATCGC	1 cut(s)	1570
Asp718I	GGTACC	1 cut(s)	981
AspLEI	GCGC	4 cut(s)	245, 335, 539, 766
AspS9I	GGNCC	7 cut(s)	573, 754, 864, 1628, 1823, 2138, 2360
AsuC2I	CCSGG	5 cut(s)	576, 674, 1097, 1404, 1580
AsuHPI	GGTGA	8 cut(s)	124, 247, 685, 928, 946, 1937, 2180, 2438
AsuII	TTCGAA	2 cut(s)	657, 2279
AvaI	CYCGRG	2 cut(s)	966, 2195
AvaII	GGWCC	3 cut(s)	1823, 2138, 2360
AxyI	CCTNAGG	1 cut(s)	569
BalI	TGGCCA	2 cut(s)	626, 1785
BanI	GGYRCC	5 cut(s)	242, 536, 680, 981, 2177
BanII	GRGCYC	2 cut(s)	603, 615
BbrPI	CACGTG	2 cut(s)	717, 1754
BbsI	GAAGAC	1 cut(s)	1609
Bbv12I	GWGCWC	5 cut(s)	530, 603, 615, 716, 1326
BbvI	GCAGC	6 cut(s)	20, 778, 867, 1574, 1980, 2216
BccI	CCATC	9 cut(s)	47, 557, 754, 850, 907, 1541, 1542, 1729, 1814
BceAI	ACGGC	5 cut(s)	445, 674, 694, 856, 1689
BcgI	CGANNNNNNTGC	2 cut(s)	2251, 2285
BciT130I	CCWGG	7 cut(s)	623, 791, 833, 868, 1176, 1232, 1632
BciVI	GTATCC	1 cut(s)	2211
BcnI	CCSGG	5 cut(s)	576, 674, 1097, 1404, 1580
BcoDI	GTCTC	4 cut(s)	496, 703, 1458, 2097
BfaI	CTAG	2 cut(s)	942, 2184
BfoI	RGCGCY	3 cut(s)	246, 336, 540
BfrI	CTTAAG	1 cut(s)	1310
BfuI	GTATCC	1 cut(s)	2211
BlpI	GCTNAGC	3 cut(s)	458, 467, 2208
Bme18I	GGWCC	3 cut(s)	1823, 2138, 2360
BmeRI	GACNNNNNGTC	1 cut(s)	562
BmeT110I	CYCGRG	2 cut(s)	966, 2195
BmgT120I	GGNCC	7 cut(s)	573, 754, 864, 1628, 1823, 2138, 2360
BmrI	ACTGGG	1 cut(s)	1794
BmsI	GCATC	1 cut(s)	2110
BmuI	ACTGGG	1 cut(s)	1794
BpiI	GAAGAC	1 cut(s)	1609
BpmI	CTGGAG	2 cut(s)	587, 800
Bpu1102I	GCTNAGC	3 cut(s)	458, 467, 2208
Bpu14I	TTCGAA	2 cut(s)	657, 2279
BpuEI	CTTGAG	2 cut(s)	959, 1544
BpuMI	CCSGG	5 cut(s)	576, 674, 1097, 1404, 1580
BsaAI	YACGTR	2 cut(s)	717, 1754
BsaHI	GRCGYC	3 cut(s)	243, 537, 582
BsaI	GGTCTC	3 cut(s)	496, 1458, 2097
BsaJI	CCNNGG	8 cut(s)	591, 621, 1230, 1231, 1631, 1951, 1957, 2131
BsaWI	WCCGGW	4 cut(s)	513, 738, 1267, 2221
Bse118I	RCCGGY	4 cut(s)	239, 436, 883, 2221
Bse1I	ACTGG	9 cut(s)	18, 817, 1262, 1613, 1627, 1800, 1852, 1996, 2363
Bse21I	CCTNAGG	1 cut(s)	569
Bse3DI	GCAATG	2 cut(s)	1117, 2269
BseBI	CCWGG	7 cut(s)	623, 791, 833, 868, 1176, 1232, 1632
BseDI	CCNNGG	8 cut(s)	591, 621, 1230, 1231, 1631, 1951, 1957, 2131
BseGI	GGATG	8 cut(s)	261, 861, 1276, 1510, 1534, 1552, 1642, 2290
BseMI	GCAATG	2 cut(s)	1117, 2269
BseMII	CTCAG	7 cut(s)	472, 481, 583, 1145, 1205, 1852, 2199
BseNI	ACTGG	9 cut(s)	18, 817, 1262, 1613, 1627, 1800, 1852, 1996, 2363
BseX3I	CGGCCG	1 cut(s)	438
BseXI	GCAGC	6 cut(s)	20, 778, 867, 1574, 1980, 2216
BsgI	GTGCAG	1 cut(s)	914
Bsh1236I	CGCG	1 cut(s)	1566
Bsh1285I	CGRYCG	3 cut(s)	441, 514, 1570
BshNI	GGYRCC	5 cut(s)	242, 536, 680, 981, 2177
BshTI	ACCGGT	1 cut(s)	2221
BsiEI	CGRYCG	3 cut(s)	441, 514, 1570
BsiHKAI	GWGCWC	5 cut(s)	530, 603, 615, 716, 1326
BsiHKCI	CYCGRG	2 cut(s)	966, 2195
BslFI	GGGAC	3 cut(s)	157, 434, 550
BsmAI	GTCTC	4 cut(s)	496, 703, 1458, 2097
BsmBI	CGTCTC	1 cut(s)	703
BsmFI	GGGAC	3 cut(s)	157, 434, 550
BsmI	GAATGC	1 cut(s)	143
Bso31I	GGTCTC	3 cut(s)	496, 1458, 2097
BsoBI	CYCGRG	2 cut(s)	966, 2195
Bsp119I	TTCGAA	2 cut(s)	657, 2279
Bsp1286I	GDGCHC	5 cut(s)	530, 603, 615, 716, 1326
Bsp143I	GATC	6 cut(s)	67, 1507, 1567, 1663, 2266, 2386
Bsp1720I	GCTNAGC	3 cut(s)	458, 467, 2208
BspCNI	CTCAG	7 cut(s)	471, 480, 582, 1144, 1206, 1851, 2200
BspFNI	CGCG	1 cut(s)	1566
BspPI	GGATC	1 cut(s)	2394
BspT104I	TTCGAA	2 cut(s)	657, 2279
BspT107I	GGYRCC	5 cut(s)	242, 536, 680, 981, 2177
BspTI	CTTAAG	1 cut(s)	1310
BspTNI	GGTCTC	3 cut(s)	496, 1458, 2097
BsrDI	GCAATG	2 cut(s)	1117, 2269
BsrFI	RCCGGY	4 cut(s)	239, 436, 883, 2221
BsrI	ACTGG	9 cut(s)	18, 817, 1262, 1613, 1627, 1800, 1852, 1996, 2363
BssAI	RCCGGY	4 cut(s)	239, 436, 883, 2221
BssECI	CCNNGG	8 cut(s)	591, 621, 1230, 1231, 1631, 1951, 1957, 2131
BssMI	GATC	6 cut(s)	67, 1507, 1567, 1663, 2266, 2386
BssNAI	GTATAC	1 cut(s)	2311
BssNI	GRCGYC	3 cut(s)	243, 537, 582
BssT1I	CCWWGG	4 cut(s)	591, 1951, 1957, 2131
Bst1107I	GTATAC	1 cut(s)	2311
Bst2UI	CCWGG	7 cut(s)	623, 791, 833, 868, 1176, 1232, 1632
Bst4CI	ACNGT	6 cut(s)	253, 532, 697, 1414, 1875, 2342
Bst6I	CTCTTC	2 cut(s)	205, 1734
BstACI	GRCGYC	3 cut(s)	243, 537, 582
BstAFI	CTTAAG	1 cut(s)	1310
BstBAI	YACGTR	2 cut(s)	717, 1754
BstBI	TTCGAA	2 cut(s)	657, 2279
BstDEI	CTNAG	8 cut(s)	458, 467, 569, 1131, 1214, 1838, 1918, 2208
BstEII	GGTNACC	2 cut(s)	2294, 2426
BstF5I	GGATG	8 cut(s)	261, 861, 1276, 1510, 1534, 1552, 1642, 2290
BstFNI	CGCG	1 cut(s)	1566
BstH2I	RGCGCY	3 cut(s)	246, 336, 540
BstHHI	GCGC	4 cut(s)	245, 335, 539, 766
BstKTI	GATC	6 cut(s)	70, 1510, 1570, 1666, 2269, 2389
BstMAI	GTCTC	4 cut(s)	496, 703, 1458, 2097
BstMBI	GATC	6 cut(s)	67, 1507, 1567, 1663, 2266, 2386
BstMCI	CGRYCG	3 cut(s)	441, 514, 1570
BstNI	CCWGG	7 cut(s)	623, 791, 833, 868, 1176, 1232, 1632
BstNSI	RCATGY	1 cut(s)	389
BstPI	GGTNACC	2 cut(s)	2294, 2426
BstUI	CGCG	1 cut(s)	1566
BstV1I	GCAGC	6 cut(s)	20, 778, 867, 1574, 1980, 2216
BstV2I	GAAGAC	1 cut(s)	1609
BstXI	CCANNNNNNTGG	1 cut(s)	1958
BstZ17I	GTATAC	1 cut(s)	2311
BstZI	CGGCCG	1 cut(s)	438
Bsu36I	CCTNAGG	1 cut(s)	569
BsuI	GTATCC	1 cut(s)	2211
BtgZI	GCGATG	1 cut(s)	25
BtsCI	GGATG	8 cut(s)	261, 861, 1276, 1510, 1534, 1552, 1642, 2290
BtsI	GCAGTG	1 cut(s)	1394
BtsIMutI	CAGTG	5 cut(s)	249, 1394, 1620, 1807, 1819
CfoI	GCGC	4 cut(s)	245, 335, 539, 766
Cfr10I	RCCGGY	4 cut(s)	239, 436, 883, 2221
Cfr13I	GGNCC	7 cut(s)	573, 754, 864, 1628, 1823, 2138, 2360
CseI	GACGC	1 cut(s)	571
CsiI	ACCWGGT	1 cut(s)	1174
Csp6I	GTAC	6 cut(s)	484, 982, 1265, 1528, 1845, 2072
CspAI	ACCGGT	1 cut(s)	2221
CviQI	GTAC	6 cut(s)	484, 982, 1265, 1528, 1845, 2072
DdeI	CTNAG	8 cut(s)	458, 467, 569, 1131, 1214, 1838, 1918, 2208
DinI	GGCGCC	2 cut(s)	244, 538
DpnI	GATC	6 cut(s)	69, 1509, 1569, 1665, 2268, 2388
DpnII	GATC	6 cut(s)	67, 1507, 1567, 1663, 2266, 2386
DraI	TTTAAA	1 cut(s)	183
DriI	GACNNNNNGTC	1 cut(s)	562
EaeI	YGGCCR	3 cut(s)	438, 624, 1783
EagI	CGGCCG	1 cut(s)	438
Eam1104I	CTCTTC	2 cut(s)	205, 1734
Eam1105I	GACNNNNNGTC	1 cut(s)	562
EarI	CTCTTC	2 cut(s)	205, 1734
EciI	GGCGGA	3 cut(s)	312, 318, 743
Ecl136II	GAGCTC	2 cut(s)	601, 613
EclXI	CGGCCG	1 cut(s)	438
Eco130I	CCWWGG	4 cut(s)	591, 1951, 1957, 2131
Eco147I	AGGCCT	1 cut(s)	1956
Eco24I	GRGCYC	2 cut(s)	603, 615
Eco31I	GGTCTC	3 cut(s)	496, 1458, 2097
Eco47I	GGWCC	3 cut(s)	1823, 2138, 2360
Eco52I	CGGCCG	1 cut(s)	438
Eco53kI	GAGCTC	2 cut(s)	601, 613
Eco57I	CTGAAG	3 cut(s)	1356, 1484, 2045
Eco72I	CACGTG	2 cut(s)	717, 1754
Eco81I	CCTNAGG	1 cut(s)	569
Eco88I	CYCGRG	2 cut(s)	966, 2195
Eco91I	GGTNACC	2 cut(s)	2294, 2426
EcoICRI	GAGCTC	2 cut(s)	601, 613
EcoO65I	GGTNACC	2 cut(s)	2294, 2426
EcoRII	CCWGG	7 cut(s)	621, 789, 831, 866, 1174, 1230, 1630
EcoT14I	CCWWGG	4 cut(s)	591, 1951, 1957, 2131
EcoT22I	ATGCAT	2 cut(s)	2125, 2248
EcoT38I	GRGCYC	2 cut(s)	603, 615
EgeI	GGCGCC	2 cut(s)	244, 538
EheI	GGCGCC	2 cut(s)	244, 538
ErhI	CCWWGG	4 cut(s)	591, 1951, 1957, 2131
Esp3I	CGTCTC	1 cut(s)	703
FalI	AAGNNNNNCTT	2 cut(s)	638, 670
FaqI	GGGAC	3 cut(s)	157, 434, 550
FauI	CCCGC	4 cut(s)	119, 125, 292, 1571
FblI	GTMKAC	3 cut(s)	585, 651, 2310
FokI	GGATG	8 cut(s)	248, 868, 1283, 1517, 1521, 1559, 1649, 2297
FriOI	GRGCYC	2 cut(s)	603, 615
FspBI	CTAG	2 cut(s)	942, 2184
GlaI	GCGC	4 cut(s)	244, 334, 538, 765
GsuI	CTGGAG	2 cut(s)	587, 800
HaeII	RGCGCY	3 cut(s)	246, 336, 540
HgaI	GACGC	1 cut(s)	571
HhaI	GCGC	4 cut(s)	245, 335, 539, 766
Hin1I	GRCGYC	3 cut(s)	243, 537, 582
Hin6I	GCGC	4 cut(s)	243, 333, 537, 764
HinP1I	GCGC	4 cut(s)	243, 333, 537, 764
HincII	GTYRAC	3 cut(s)	652, 1018, 1948
HindII	GTYRAC	3 cut(s)	652, 1018, 1948
HindIII	AAGCTT	2 cut(s)	1103, 1520
HinfI	GANTC	7 cut(s)	413, 422, 545, 958, 1135, 1258, 1609
HphI	GGTGA	8 cut(s)	124, 247, 685, 928, 946, 1937, 2180, 2438
Hpy166II	GTNNAC	8 cut(s)	15, 586, 652, 705, 1018, 1367, 1948, 2311
Hpy188I	TCNGA	9 cut(s)	67, 496, 556, 1134, 1215, 1431, 1710, 2273, 2420
Hpy8I	GTNNAC	8 cut(s)	15, 586, 652, 705, 1018, 1367, 1948, 2311
Hpy99I	CGWCG	3 cut(s)	404, 536, 545
HpyCH4III	ACNGT	6 cut(s)	253, 532, 697, 1414, 1875, 2342
HpyCH4IV	ACGT	3 cut(s)	716, 750, 1753
HpyCH4V	TGCA	8 cut(s)	385, 744, 895, 910, 952, 2123, 2204, 2246
HpyF3I	CTNAG	8 cut(s)	458, 467, 569, 1131, 1214, 1838, 1918, 2208
HpySE526I	ACGT	3 cut(s)	716, 750, 1753
Hsp92I	GRCGYC	3 cut(s)	243, 537, 582
HspAI	GCGC	4 cut(s)	243, 333, 537, 764
KasI	GGCGCC	2 cut(s)	242, 536
KpnI	GGTACC	1 cut(s)	985
KroI	GCCGGC	3 cut(s)	239, 436, 883
KroNI	GCCGGC	3 cut(s)	241, 438, 885
Kzo9I	GATC	6 cut(s)	67, 1507, 1567, 1663, 2266, 2386
LmnI	GCTCC	4 cut(s)	525, 606, 618, 819
Lsp1109I	GCAGC	6 cut(s)	20, 778, 867, 1574, 1980, 2216
LweI	GCATC	1 cut(s)	2110
MabI	ACCWGGT	1 cut(s)	1174
MaeI	CTAG	2 cut(s)	942, 2184
MaeII	ACGT	3 cut(s)	716, 750, 1753
MaeIII	GTNAC	7 cut(s)	253, 691, 1414, 2081, 2156, 2294, 2426
MalI	GATC	6 cut(s)	69, 1509, 1569, 1665, 2268, 2388
MboI	GATC	6 cut(s)	67, 1507, 1567, 1663, 2266, 2386
MboII	GAAGA	9 cut(s)	192, 499, 967, 1288, 1609, 1751, 1829, 1975, 2407
MfeI	CAATTG	1 cut(s)	628
MhlI	GDGCHC	5 cut(s)	530, 603, 615, 716, 1326
MlsI	TGGCCA	2 cut(s)	626, 1785
MluCI	AATT	8 cut(s)	277, 628, 1027, 1154, 1514, 1604, 1696, 1715
MluNI	TGGCCA	2 cut(s)	626, 1785
Mly113I	GGCGCC	2 cut(s)	243, 537
MlyI	GAGTC	5 cut(s)	416, 422, 539, 1144, 1618
MmeI	TCCRAC	4 cut(s)	228, 579, 1853, 2080
Mox20I	TGGCCA	2 cut(s)	626, 1785
Mph1103I	ATGCAT	2 cut(s)	2125, 2248
MreI	CGCCGGCG	1 cut(s)	239
MroNI	GCCGGC	3 cut(s)	239, 436, 883
MscI	TGGCCA	2 cut(s)	626, 1785
MseI	TTAA	9 cut(s)	182, 747, 1188, 1223, 1311, 1518, 1593, 2006, 2226
MslI	CAYNNNNRTG	4 cut(s)	749, 1253, 2088, 2262
Msp20I	TGGCCA	2 cut(s)	626, 1785
MspA1I	CMGCKG	4 cut(s)	471, 1842, 2023, 2207
MspCI	CTTAAG	1 cut(s)	1310
MunI	CAATTG	1 cut(s)	628
Mva1269I	GAATGC	1 cut(s)	143
MvaI	CCWGG	7 cut(s)	623, 791, 833, 868, 1176, 1232, 1632
MvnI	CGCG	1 cut(s)	1566
NaeI	GCCGGC	3 cut(s)	241, 438, 885
NarI	GGCGCC	2 cut(s)	243, 537
NciI	CCSGG	5 cut(s)	576, 674, 1097, 1404, 1580
NdeII	GATC	6 cut(s)	67, 1507, 1567, 1663, 2266, 2386
NgoMIV	GCCGGC	3 cut(s)	239, 436, 883
NmeAIII	GCCGAG	3 cut(s)	167, 622, 1057
NmuCI	GTSAC	4 cut(s)	253, 691, 2081, 2426
NsiI	ATGCAT	2 cut(s)	2125, 2248
NspI	RCATGY	1 cut(s)	389
NspV	TTCGAA	2 cut(s)	657, 2279
OliI	CACNNNNGTG	1 cut(s)	2088
PaeI	GCATGC	1 cut(s)	389
PaeR7I	CTCGAG	1 cut(s)	2195
PasI	CCCWGGG	1 cut(s)	1231
PceI	AGGCCT	1 cut(s)	1956
PcsI	WCGNNNNNNNCGW	5 cut(s)	408, 540, 648, 693, 713
PctI	GAATGC	1 cut(s)	143
PdiI	GCCGGC	3 cut(s)	241, 438, 885
PfeI	GAWTC	2 cut(s)	958, 1258
PflMI	CCANNNNNTGG	1 cut(s)	622
PfoI	TCCNGGA	1 cut(s)	1095
PinAI	ACCGGT	1 cut(s)	2221
Ple19I	CGATCG	1 cut(s)	1570
PleI	GAGTC	5 cut(s)	416, 421, 539, 1143, 1617
PluTI	GGCGCC	2 cut(s)	246, 540
PmaCI	CACGTG	2 cut(s)	717, 1754
PmlI	CACGTG	2 cut(s)	717, 1754
PpsI	GAGTC	5 cut(s)	416, 421, 539, 1143, 1617
Ppu21I	YACGTR	2 cut(s)	717, 1754
Psp124BI	GAGCTC	2 cut(s)	603, 615
Psp6I	CCWGG	7 cut(s)	621, 789, 831, 866, 1174, 1230, 1630
PspCI	CACGTG	2 cut(s)	717, 1754
PspEI	GGTNACC	2 cut(s)	2294, 2426
PspGI	CCWGG	7 cut(s)	621, 789, 831, 866, 1174, 1230, 1630
PspPI	GGNCC	7 cut(s)	573, 754, 864, 1628, 1823, 2138, 2360
PspXI	VCTCGAGB	1 cut(s)	2195
PvuI	CGATCG	1 cut(s)	1570
PvuII	CAGCTG	2 cut(s)	2023, 2207
RgaI	GCGATCGC	1 cut(s)	1570
RsaI	GTAC	6 cut(s)	485, 983, 1266, 1529, 1846, 2073
RsaNI	GTAC	6 cut(s)	484, 982, 1265, 1528, 1845, 2072
RseI	CAYNNNNRTG	4 cut(s)	749, 1253, 2088, 2262
SacI	GAGCTC	2 cut(s)	603, 615
SalI	GTCGAC	1 cut(s)	650
SaqAI	TTAA	9 cut(s)	182, 747, 1188, 1223, 1311, 1518, 1593, 2006, 2226
Sau3AI	GATC	6 cut(s)	67, 1507, 1567, 1663, 2266, 2386
Sau96I	GGNCC	7 cut(s)	573, 754, 864, 1628, 1823, 2138, 2360
SchI	GAGTC	5 cut(s)	416, 422, 539, 1144, 1618
SduI	GDGCHC	5 cut(s)	530, 603, 615, 716, 1326
SexAI	ACCWGGT	1 cut(s)	1174
SfaAI	GCGATCGC	1 cut(s)	1570
SfaNI	GCATC	1 cut(s)	2110
SfoI	GGCGCC	2 cut(s)	244, 538
Sfr274I	CTCGAG	1 cut(s)	2195
SfuI	TTCGAA	2 cut(s)	657, 2279
SgfI	GCGATCGC	1 cut(s)	1570
SgrAI	CRCCGGYG	1 cut(s)	239
SinI	GGWCC	3 cut(s)	1823, 2138, 2360
SlaI	CTCGAG	1 cut(s)	2195
SmiMI	CAYNNNNRTG	4 cut(s)	749, 1253, 2088, 2262
SmlI	CTYRAG	4 cut(s)	974, 1310, 1523, 2195
SmoI	CTYRAG	4 cut(s)	974, 1310, 1523, 2195
SphI	GCATGC	1 cut(s)	389
Sse9I	AATT	8 cut(s)	277, 628, 1027, 1154, 1514, 1604, 1696, 1715
SseBI	AGGCCT	1 cut(s)	1956
SspDI	GGCGCC	2 cut(s)	242, 536
SspMI	CTAG	2 cut(s)	942, 2184
SstI	GAGCTC	2 cut(s)	603, 615
StuI	AGGCCT	1 cut(s)	1956
StyI	CCWWGG	4 cut(s)	591, 1951, 1957, 2131
TaaI	ACNGT	6 cut(s)	253, 532, 697, 1414, 1875, 2342
TaiI	ACGT	3 cut(s)	719, 753, 1756
TaqI	TCGA	9 cut(s)	510, 642, 651, 657, 1171, 1600, 1666, 2196, 2279
TaqII	GACCGA	1 cut(s)	815
TasI	AATT	8 cut(s)	277, 628, 1027, 1154, 1514, 1604, 1696, 1715
TatI	WGTACW	2 cut(s)	483, 2071
TauI	GCSGC	7 cut(s)	333, 342, 392, 474, 582, 728, 2183
TfiI	GAWTC	2 cut(s)	958, 1258
Tru1I	TTAA	9 cut(s)	182, 747, 1188, 1223, 1311, 1518, 1593, 2006, 2226
Tru9I	TTAA	9 cut(s)	182, 747, 1188, 1223, 1311, 1518, 1593, 2006, 2226
TscAI	CASTG	5 cut(s)	256, 1401, 1627, 1807, 1819
TseFI	GTSAC	4 cut(s)	253, 691, 2081, 2426
TseI	GCWGC	6 cut(s)	8, 766, 880, 1587, 1968, 2204
Tsp45I	GTSAC	4 cut(s)	253, 691, 2081, 2426
TspDTI	ATGAA	6 cut(s)	280, 1296, 1656, 1691, 1773, 2066
TspGWI	ACGGA	4 cut(s)	360, 722, 1361, 2230
TspRI	CASTG	5 cut(s)	256, 1401, 1627, 1807, 1819
Van91I	CCANNNNNTGG	1 cut(s)	622
Vha464I	CTTAAG	1 cut(s)	1310
VpaK11BI	GGWCC	3 cut(s)	1823, 2138, 2360
XapI	RAATTY	4 cut(s)	1027, 1514, 1696, 1715
XceI	RCATGY	1 cut(s)	389
XcmI	CCANNNNNNNNNTGG	1 cut(s)	556
XhoI	CTCGAG	1 cut(s)	2195
XmiI	GTMKAC	3 cut(s)	585, 651, 2310
XspI	CTAG	2 cut(s)	942, 2184
Zsp2I	ATGCAT	2 cut(s)	2125, 2248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.