AT3G48850

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
18114526 .. 18116569
2044 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G48850.1

Sequence Viewer

Length: 1092 bp
ATGTCTGACTCAAGCAGATCGCTGATCCCGAGCTTTCTCTACTCGTCCGATCATCGTCTTTTTCAGGCGACGACCATGAGTACTCACCTTAAATCACAGCCGTTGATTTCTCCGACTAATTCTTCAGTCTCATCCAACGGTACCAGTTTCGCCATCGCGACGCCGAATGAAAAAGTGGAAATGTACTCGCCGGCGTATTTCGCGGCGTGTACGGTCGCCGGGATGCTGAGCTGCGGTATCACCCACACGGCGATTACGCCACTTGATGTCATCAAATGCAACATGCAGATTGATCCACTGAAGTACAAGAACATAACTTCAGCTTTCAAGACAACAATCAAAGAGCAAGGGCTTAAGGGTTTCACCAGAGGCTGGTCACCAACGCTTCTTGGTTACAGTGCCCAAGGAGCTTTTAAATACGGTCTCTATGAGTACGCCAAGAAATACTACTCAGACATTGTTGGACCAGAATACGCAGCTAAATACAAGACCTTGATTTACCTCGCTGGCTCAGCCTCTGCAGAAATCGTCGCTGATGTGGCTCTTTGTCCAATGGAAGCTGTCAAAGTCAGGGTCCAGACTCAGCCTGGTTTCGCCCGCGGTTTATCTGATGGTTTACCAAAGATCATCAAATCCGAAGGCTTCCGCGGGTTACACAAAGGACTTGTTCCTCTCTGGGGACGCCAGATTCCATATACGATGATGAAATTTGCTACTTTTGAAAACACTGTGGAGCTCATATACAAGAAAGTGATGCCTACCCCAAAAGAAGAGTGCTCAAAGCCAGTTCAGCTCGGAGTTAGCTTTGCAGGTGGATACATTGCTGGAATATTCTGCGCCATCATCTCACATCCTGCAGATAATTTGGTGTCTTTCCTCAATAACTCTAAAGGAGCAACCGTTGCTGATGCAGTAAAGAGGCTAGGGTTATGGGGTATGTTAACCCGTGGCCTTCCTCTTCGCATTTTCATGATAGGAACACTCACTGGAGCGCAGTGGGTTATCTATGATGCTGTCAAAGTTTTAGCTGGATTGCCAACCACTGGTGGTGCTTCTCCAGCTACTGCGCTTGCTCCATCTGTAAGTGCATAA

Protein Analysis

363

Amino Acids

39.02

Weight (kDa)

9.36

Isoelectric Point (pI)

34.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 65 - 151 7.7e-23 Mitochondrial carrier protein
Mito_carr PF00153 163 - 250 9.9e-19 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 800
Acc36I ACCTGC 1 cut(s) 800
Acc65I GGTACC 1 cut(s) 140
AccB1I GGYRCC 1 cut(s) 140
AccB7I CCANNNNNTGG 2 cut(s) 372, 1043
AccII CGCG 4 cut(s) 158, 203, 600, 648
AciI CCGC 6 cut(s) 203, 234, 598, 600, 646, 648
AclWI GGATC 2 cut(s) 19, 287
AcsI RAATTY 1 cut(s) 707
AcuI CTGAAG 3 cut(s) 108, 303, 320
AcyI GRCGYC 2 cut(s) 161, 682
AfaI GTAC 6 cut(s) 82, 142, 185, 211, 305, 434
AfiI CCNNNNNNNGG 3 cut(s) 372, 677, 1043
AflII CTTAAG 1 cut(s) 353
AgsI TTSAA 2 cut(s) 328, 722
AjnI CCWGG 1 cut(s) 586
Alw21I GWGCWC 2 cut(s) 738, 779
Alw26I GTCTC 2 cut(s) 133, 428
AlwI GGATC 2 cut(s) 19, 287
AlwNI CAGNNNCTG 3 cut(s) 372, 518, 1064
Ama87I CYCGRG 1 cut(s) 28
AoxI GGCC 1 cut(s) 949
ApeKI GCWGC 2 cut(s) 231, 476
ApoI RAATTY 1 cut(s) 707
ArsI GACNNNNNNTTYG 2 cut(s) 558, 590
Asp718I GGTACC 1 cut(s) 140
AspLEI GCGC 3 cut(s) 839, 994, 1069
AspS9I GGNCC 2 cut(s) 464, 574
AsuC2I CCSGG 1 cut(s) 220
AsuHPI GGTGA 4 cut(s) 77, 232, 355, 369
AvaI CYCGRG 1 cut(s) 28
AvaII GGWCC 2 cut(s) 464, 574
BaeGI GKGCMC 1 cut(s) 403
BanI GGYRCC 1 cut(s) 140
BanII GRGCYC 1 cut(s) 738
Bbv12I GWGCWC 2 cut(s) 738, 779
BbvI GCAGC 2 cut(s) 218, 488
BccI CCATC 4 cut(s) 161, 605, 848, 1084
BceAI ACGGC 2 cut(s) 85, 264
BciT130I CCWGG 1 cut(s) 588
BciVI GTATCC 1 cut(s) 809
BcnI CCSGG 1 cut(s) 220
BcoDI GTCTC 2 cut(s) 133, 428
BfaI CTAG 1 cut(s) 923
BfmI CTRYAG 2 cut(s) 519, 855
BfrI CTTAAG 1 cut(s) 353
BfuAI ACCTGC 1 cut(s) 800
BfuI GTATCC 1 cut(s) 809
BisI GCNGC 3 cut(s) 204, 232, 477
BlpI GCTNAGC 2 cut(s) 227, 511
BlsI GCNGC 3 cut(s) 205, 233, 478
BmcAI AGTACT 1 cut(s) 82
Bme1390I CCNGG 2 cut(s) 220, 588
Bme18I GGWCC 2 cut(s) 464, 574
BmeT110I CYCGRG 1 cut(s) 28
BmgT120I GGNCC 2 cut(s) 464, 574
BmiI GGNNCC 2 cut(s) 142, 575
BmrFI CCNGG 2 cut(s) 220, 588
BmsI GCATC 4 cut(s) 213, 744, 898, 1000
BpmI CTGGAG 2 cut(s) 1008, 1041
Bpu1102I GCTNAGC 2 cut(s) 227, 511
BpuMI CCSGG 1 cut(s) 220
BsaHI GRCGYC 2 cut(s) 161, 682
BsaI GGTCTC 1 cut(s) 428
BsaJI CCNNGG 4 cut(s) 403, 598, 646, 946
BsaXI ACNNNNNCTCC 2 cut(s) 885, 915
Bsc4I CCNNNNNNNGG 3 cut(s) 372, 677, 1043
Bse118I RCCGGY 1 cut(s) 190
Bse1I ACTGG 4 cut(s) 144, 785, 991, 1048
Bse3DI GCAATG 1 cut(s) 819
BseBI CCWGG 1 cut(s) 588
BseDI CCNNGG 4 cut(s) 403, 598, 646, 946
BseGI GGATG 3 cut(s) 131, 228, 850
BseLI CCNNNNNNNGG 3 cut(s) 372, 677, 1043
BseMI GCAATG 1 cut(s) 819
BseMII CTCAG 4 cut(s) 218, 465, 525, 596
BseNI ACTGG 4 cut(s) 144, 785, 991, 1048
BseSI GKGCMC 1 cut(s) 403
BseXI GCAGC 2 cut(s) 218, 488
Bsh1236I CGCG 4 cut(s) 158, 203, 600, 648
Bsh1285I CGRYCG 1 cut(s) 216
BshFI GGCC 1 cut(s) 951
BshNI GGYRCC 1 cut(s) 140
BsiEI CGRYCG 1 cut(s) 216
BsiHKAI GWGCWC 2 cut(s) 738, 779
BsiHKCI CYCGRG 1 cut(s) 28
BsiSI CCGG 2 cut(s) 191, 219
BslFI GGGAC 1 cut(s) 693
BslI CCNNNNNNNGG 3 cut(s) 372, 677, 1043
BsmAI GTCTC 2 cut(s) 133, 428
BsmFI GGGAC 1 cut(s) 693
BsnI GGCC 1 cut(s) 951
Bso31I GGTCTC 1 cut(s) 428
BsoBI CYCGRG 1 cut(s) 28
Bsp1286I GDGCHC 3 cut(s) 403, 738, 779
Bsp143I GATC 5 cut(s) 17, 24, 49, 292, 624
Bsp1720I GCTNAGC 2 cut(s) 227, 511
Bsp68I TCGCGA 1 cut(s) 158
BspACI CCGC 6 cut(s) 203, 234, 598, 600, 646, 648
BspANI GGCC 1 cut(s) 951
BspCNI CTCAG 4 cut(s) 219, 464, 524, 595
BspFNI CGCG 4 cut(s) 158, 203, 600, 648
BspHI TCATGA 1 cut(s) 969
BspLI GGNNCC 2 cut(s) 142, 575
BspMAI CTGCAG 2 cut(s) 523, 859
BspMI ACCTGC 1 cut(s) 800
BspPI GGATC 2 cut(s) 19, 287
BspT107I GGYRCC 1 cut(s) 140
BspTI CTTAAG 1 cut(s) 353
BspTNI GGTCTC 1 cut(s) 428
BsrDI GCAATG 1 cut(s) 819
BsrFI RCCGGY 1 cut(s) 190
BsrI ACTGG 4 cut(s) 144, 785, 991, 1048
BssAI RCCGGY 1 cut(s) 190
BssECI CCNNGG 4 cut(s) 403, 598, 646, 946
BssMI GATC 5 cut(s) 17, 24, 49, 292, 624
BssNI GRCGYC 2 cut(s) 161, 682
BssT1I CCWWGG 1 cut(s) 403
Bst2UI CCWGG 1 cut(s) 588
Bst4CI ACNGT 6 cut(s) 140, 214, 398, 422, 730, 901
Bst6I CTCTTC 2 cut(s) 765, 963
BstACI GRCGYC 2 cut(s) 161, 682
BstAFI CTTAAG 1 cut(s) 353
BstAPI GCANNNNNTGC 1 cut(s) 902
BstC8I GCNNGC 4 cut(s) 192, 508, 598, 1071
BstDEI CTNAG 4 cut(s) 227, 451, 511, 582
BstDSI CCRYGG 3 cut(s) 598, 646, 946
BstEII GGTNACC 1 cut(s) 375
BstF5I GGATG 3 cut(s) 131, 228, 850
BstFNI CGCG 4 cut(s) 158, 203, 600, 648
BstHHI GCGC 3 cut(s) 839, 994, 1069
BstKTI GATC 5 cut(s) 20, 27, 52, 295, 627
BstMAI GTCTC 2 cut(s) 133, 428
BstMBI GATC 5 cut(s) 17, 24, 49, 292, 624
BstMCI CGRYCG 1 cut(s) 216
BstMWI GCNNNNNNNGC 7 cut(s) 200, 407, 512, 539, 790, 902, 1058
BstNI CCWGG 1 cut(s) 588
BstNSI RCATGY 1 cut(s) 286
BstPI GGTNACC 1 cut(s) 375
BstSCI CCNGG 2 cut(s) 218, 586
BstSFI CTRYAG 2 cut(s) 519, 855
BstSLI GKGCMC 1 cut(s) 403
BstUI CGCG 4 cut(s) 158, 203, 600, 648
BstV1I GCAGC 2 cut(s) 218, 488
BsuI GTATCC 1 cut(s) 809
BsuRI GGCC 1 cut(s) 951
BtgI CCRYGG 3 cut(s) 598, 646, 946
BtgZI GCGATG 1 cut(s) 139
BtsCI GGATG 3 cut(s) 131, 228, 850
BtsI GCAGTG 1 cut(s) 1001
BtsIMutI CAGTG 6 cut(s) 296, 403, 726, 984, 1001, 1041
BtuMI TCGCGA 1 cut(s) 158
BveI ACCTGC 1 cut(s) 800
Cac8I GCNNGC 4 cut(s) 192, 508, 598, 1071
CaiI CAGNNNCTG 3 cut(s) 372, 518, 1064
CciI TCATGA 1 cut(s) 969
CfoI GCGC 3 cut(s) 839, 994, 1069
Cfr10I RCCGGY 1 cut(s) 190
Cfr13I GGNCC 2 cut(s) 464, 574
Cfr42I CCGCGG 2 cut(s) 601, 649
CseI GACGC 2 cut(s) 169, 690
Csp6I GTAC 6 cut(s) 81, 141, 184, 210, 304, 433
CviAII CATG 3 cut(s) 76, 283, 970
CviQI GTAC 6 cut(s) 81, 141, 184, 210, 304, 433
DdeI CTNAG 4 cut(s) 227, 451, 511, 582
DpnI GATC 5 cut(s) 19, 26, 51, 294, 626
DpnII GATC 5 cut(s) 17, 24, 49, 292, 624
DraI TTTAAA 1 cut(s) 415
Eam1104I CTCTTC 2 cut(s) 765, 963
EarI CTCTTC 2 cut(s) 765, 963
Ecl136II GAGCTC 1 cut(s) 736
Eco130I CCWWGG 1 cut(s) 403
Eco24I GRGCYC 1 cut(s) 738
Eco31I GGTCTC 1 cut(s) 428
Eco47I GGWCC 2 cut(s) 464, 574
Eco53kI GAGCTC 1 cut(s) 736
Eco57I CTGAAG 3 cut(s) 108, 303, 320
Eco88I CYCGRG 1 cut(s) 28
Eco91I GGTNACC 1 cut(s) 375
EcoICRI GAGCTC 1 cut(s) 736
EcoO65I GGTNACC 1 cut(s) 375
EcoRII CCWGG 1 cut(s) 586
EcoT14I CCWWGG 1 cut(s) 403
EcoT38I GRGCYC 1 cut(s) 738
ErhI CCWWGG 1 cut(s) 403
FaeI CATG 3 cut(s) 79, 286, 973
FaqI GGGAC 1 cut(s) 693
FatI CATG 3 cut(s) 75, 282, 969
FauI CCCGC 2 cut(s) 605, 641
Fnu4HI GCNGC 3 cut(s) 204, 232, 477
FokI GGATG 3 cut(s) 118, 235, 837
FriOI GRGCYC 1 cut(s) 738
Fsp4HI GCNGC 3 cut(s) 204, 232, 477
FspBI CTAG 1 cut(s) 923
GlaI GCGC 3 cut(s) 838, 993, 1068
GluI GCNGC 3 cut(s) 204, 232, 477
GsuI CTGGAG 2 cut(s) 1008, 1041
HaeIII GGCC 1 cut(s) 951
HapII CCGG 2 cut(s) 191, 219
HgaI GACGC 2 cut(s) 169, 690
HhaI GCGC 3 cut(s) 839, 994, 1069
Hin1I GRCGYC 2 cut(s) 161, 682
Hin1II CATG 3 cut(s) 79, 286, 973
Hin6I GCGC 3 cut(s) 837, 992, 1067
HinP1I GCGC 3 cut(s) 837, 992, 1067
HincII GTYRAC 1 cut(s) 942
HindII GTYRAC 1 cut(s) 942
HinfI GANTC 3 cut(s) 8, 580, 688
HpaI GTTAAC 1 cut(s) 942
HpaII CCGG 2 cut(s) 191, 219
HphI GGTGA 4 cut(s) 77, 232, 355, 369
Hpy166II GTNNAC 3 cut(s) 210, 617, 942
Hpy188I TCNGA 7 cut(s) 7, 49, 114, 454, 610, 637, 797
Hpy188III TCNNGA 5 cut(s) 28, 157, 328, 577, 970
Hpy8I GTNNAC 3 cut(s) 210, 617, 942
Hpy99I CGWCG 3 cut(s) 73, 163, 533
HpyAV CCTTC 2 cut(s) 632, 962
HpyCH4III ACNGT 6 cut(s) 140, 214, 398, 422, 730, 901
HpyCH4V TGCA 7 cut(s) 279, 286, 521, 809, 857, 911, 1088
HpyF10VI GCNNNNNNNGC 7 cut(s) 200, 407, 512, 539, 790, 902, 1058
HpyF3I CTNAG 4 cut(s) 227, 451, 511, 582
Hsp92I GRCGYC 2 cut(s) 161, 682
Hsp92II CATG 3 cut(s) 79, 286, 973
HspAI GCGC 3 cut(s) 837, 992, 1067
KpnI GGTACC 1 cut(s) 144
KroI GCCGGC 1 cut(s) 190
KroNI GCCGGC 1 cut(s) 192
KspAI GTTAAC 1 cut(s) 942
KspI CCGCGG 2 cut(s) 601, 649
Kzo9I GATC 5 cut(s) 17, 24, 49, 292, 624
LmnI GCTCC 5 cut(s) 407, 733, 893, 989, 1078
Lsp1109I GCAGC 2 cut(s) 218, 488
LweI GCATC 4 cut(s) 213, 744, 898, 1000
MaeI CTAG 1 cut(s) 923
MaeIII GTNAC 3 cut(s) 375, 392, 651
MalI GATC 5 cut(s) 19, 26, 51, 294, 626
MboI GATC 5 cut(s) 17, 24, 49, 292, 624
MboII GAAGA 3 cut(s) 114, 782, 950
MhlI GDGCHC 3 cut(s) 403, 738, 779
MluCI AATT 3 cut(s) 118, 707, 862
MlyI GAGTC 2 cut(s) 2, 574
MmeI TCCRAC 3 cut(s) 137, 159, 442
MnlI CCTC 7 cut(s) 362, 512, 526, 681, 887, 912, 966
MreI CGCCGGCG 1 cut(s) 190
MroNI GCCGGC 1 cut(s) 190
MseI TTAA 4 cut(s) 90, 354, 414, 941
MslI CAYNNNNRTG 1 cut(s) 968
MspA1I CMGCKG 2 cut(s) 600, 648
MspCI CTTAAG 1 cut(s) 353
MspI CCGG 2 cut(s) 191, 219
MspR9I CCNGG 2 cut(s) 220, 588
MvaI CCWGG 1 cut(s) 588
MvnI CGCG 4 cut(s) 158, 203, 600, 648
MwoI GCNNNNNNNGC 7 cut(s) 200, 407, 512, 539, 790, 902, 1058
NaeI GCCGGC 1 cut(s) 192
NciI CCSGG 1 cut(s) 220
NdeII GATC 5 cut(s) 17, 24, 49, 292, 624
NgoMIV GCCGGC 1 cut(s) 190
NlaIII CATG 3 cut(s) 79, 286, 973
NlaIV GGNNCC 2 cut(s) 142, 575
NmuCI GTSAC 1 cut(s) 375
NruI TCGCGA 1 cut(s) 158
NspI RCATGY 1 cut(s) 286
PagI TCATGA 1 cut(s) 969
PaqCI CACCTGC 1 cut(s) 800
PcsI WCGNNNNNNNCGW 1 cut(s) 26
PdiI GCCGGC 1 cut(s) 192
PfeI GAWTC 1 cut(s) 688
PflMI CCANNNNNTGG 2 cut(s) 372, 1043
PkrI GCNGC 3 cut(s) 205, 233, 478
PleI GAGTC 2 cut(s) 2, 574
PpsI GAGTC 2 cut(s) 2, 574
Psp124BI GAGCTC 1 cut(s) 738
Psp6I CCWGG 1 cut(s) 586
PspEI GGTNACC 1 cut(s) 375
PspGI CCWGG 1 cut(s) 586
PspN4I GGNNCC 2 cut(s) 142, 575
PspPI GGNCC 2 cut(s) 464, 574
PstI CTGCAG 2 cut(s) 523, 859
PstNI CAGNNNCTG 3 cut(s) 372, 518, 1064
RruI TCGCGA 1 cut(s) 158
RsaI GTAC 6 cut(s) 82, 142, 185, 211, 305, 434
RsaNI GTAC 6 cut(s) 81, 141, 184, 210, 304, 433
RseI CAYNNNNRTG 1 cut(s) 968
SacI GAGCTC 1 cut(s) 738
SacII CCGCGG 2 cut(s) 601, 649
SaqAI TTAA 4 cut(s) 90, 354, 414, 941
SatI GCNGC 3 cut(s) 204, 232, 477
Sau3AI GATC 5 cut(s) 17, 24, 49, 292, 624
Sau96I GGNCC 2 cut(s) 464, 574
ScaI AGTACT 1 cut(s) 82
SchI GAGTC 2 cut(s) 2, 574
ScrFI CCNGG 2 cut(s) 220, 588
SduI GDGCHC 3 cut(s) 403, 738, 779
SfaNI GCATC 4 cut(s) 213, 744, 898, 1000
SfcI CTRYAG 2 cut(s) 519, 855
Sfr303I CCGCGG 2 cut(s) 601, 649
SgrAI CRCCGGYG 1 cut(s) 190
SgrBI CCGCGG 2 cut(s) 601, 649
SinI GGWCC 2 cut(s) 464, 574
SmiMI CAYNNNNRTG 1 cut(s) 968
SmlI CTYRAG 2 cut(s) 10, 353
SmoI CTYRAG 2 cut(s) 10, 353
Sse9I AATT 3 cut(s) 118, 707, 862
SsiI CCGC 6 cut(s) 203, 234, 598, 600, 646, 648
SspI AATATT 1 cut(s) 831
SspMI CTAG 1 cut(s) 923
SstI GAGCTC 1 cut(s) 738
StyD4I CCNGG 2 cut(s) 218, 586
StyI CCWWGG 1 cut(s) 403
TaaI ACNGT 6 cut(s) 140, 214, 398, 422, 730, 901
TasI AATT 3 cut(s) 118, 707, 862
TatI WGTACW 3 cut(s) 80, 183, 303
TauI GCSGC 1 cut(s) 206
TfiI GAWTC 1 cut(s) 688
Tru1I TTAA 4 cut(s) 90, 354, 414, 941
Tru9I TTAA 4 cut(s) 90, 354, 414, 941
TscAI CASTG 6 cut(s) 303, 403, 733, 991, 1001, 1048
TseFI GTSAC 1 cut(s) 375
TseI GCWGC 2 cut(s) 231, 476
Tsp45I GTSAC 1 cut(s) 375
TspDTI ATGAA 3 cut(s) 183, 719, 958
TspRI CASTG 6 cut(s) 303, 403, 733, 991, 1001, 1048
Van91I CCANNNNNTGG 2 cut(s) 372, 1043
Vha464I CTTAAG 1 cut(s) 353
VpaK11BI GGWCC 2 cut(s) 464, 574
XapI RAATTY 1 cut(s) 707
XceI RCATGY 1 cut(s) 286
XcmI CCANNNNNNNNNTGG 1 cut(s) 584
XspI CTAG 1 cut(s) 923
ZrmI AGTACT 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.