Prupe.5G143800_v2.0.a1

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
13289514 .. 13295808
6295 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G143800.1

Sequence Viewer

Length: 1059 bp
ATGGCGGATCCACTCAACAACAACAAAAACTCTCGCCACTCTCTCCTCCCAAGCTTCCTCTACTCTTCATCTTCTTCAATGGTGGCATCAGGTTATGCATCATCAGCACCGTCATCAAGAGTGGTGATTGCCGCGCCTAGAGAGAAGGTGGAGATGTACTCTGCTGGGTACTATGTTGCGTGTGGAGTTGCAGGTATGCTGGCCACTGGCCCAACCCATATGGCCGTCACGCCTATGGATGTCGTCAAGTGTAATATGCAGATTGACCCAATTAAGTACAAGAGCGTCACATCCGGATTTGGAGTTCTGTTGAAGGAGCAGGGCATCAGAGGTTTGTTCAAGGGCTGGGCGCCCACCTTGATCGGCTACAGCGCCCAGGGTGCTGGAAAGTATGGCCTCTATGAGTTTTTCAAGAAGTACTACACAGACATTGCAGGGCCAGAGTATGCAGCCAAGTACAAGACCTTGATCTACCTTGCAGGCTCTGCATCAGCTGAAGTCATTGCTGATGTTGCCCTCTGTCCCATGGAAGCTGTCAAAGTTCGTGTCCAAACTCAGCCCGGCTTTGCCAGAGGCTTGGCTGATGGGCTTCCAAAGATCATCAAATCCGAAGGCGCTCTCGGGTTGTACAAGGGGCTTGTTCCTCTTTGGGGACGTCAGGTTCCTTATACTATGATGAAATTTGCGGCGTTCGAGAATACAATCGAGCTGATGTACAAGCATGTCATCCCAACACCTAAAGAGCAATGCAGCAAACCTTTGCAGCTGGGGGTGAGCTTTGCCAGTGGATATATTGCTGGTGTATTCTGTGCTGTTGTCTCACACCCAGCTGACAACTTGGTCTCTTTCCTCAACAATGCCAAGGGAGCAACTGTTGGTGATGCTGTGAAGAAGCTAGGGTTATTAGGTCTTTTCACTCGTGGTCTTCCTCTTCGAATATTCATGATTGGAACCCTCAGTGCAGGCCAATGGGCTCTCTATGACACTTTCAAAGTTTTGGTTGGGCTGCCAACTACCGGTGGTCCTGCTCCCGCCGCCACCGAGCTTGCCAAGGCTTGA

Protein Analysis

353

Amino Acids

37.44

Weight (kDa)

9.38

Isoelectric Point (pI)

24.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 839
AatII GACGTC 1 cut(s) 658
Acc36I ACCTGC 1 cut(s) 182
AccB1I GGYRCC 1 cut(s) 349
AccII CGCG 1 cut(s) 134
AccIII TCCGGA 1 cut(s) 293
AciI CCGC 5 cut(s) 5, 132, 686, 1032, 1035
AclWI GGATC 2 cut(s) 2, 15
AcoI YGGCCR 2 cut(s) 201, 222
AcsI RAATTY 1 cut(s) 680
AcuI CTGAAG 1 cut(s) 516
AcyI GRCGYC 2 cut(s) 350, 655
AfaI GTAC 7 cut(s) 158, 170, 278, 419, 458, 629, 716
AfiI CCNNNNNNNGG 2 cut(s) 650, 1016
AgeI ACCGGT 1 cut(s) 1016
AgsI TTSAA 5 cut(s) 78, 313, 340, 412, 991
AjnI CCWGG 1 cut(s) 375
AloI GAACNNNNNNTCC 4 cut(s) 288, 320, 645, 677
AluBI AGCT 9 cut(s) 54, 494, 533, 709, 766, 777, 830, 895, 1045
AluI AGCT 9 cut(s) 54, 494, 533, 709, 766, 777, 830, 895, 1045
Alw26I GTCTC 2 cut(s) 823, 847
AlwI GGATC 2 cut(s) 2, 15
AlwNI CAGNNNCTG 1 cut(s) 485
Ama87I CYCGRG 1 cut(s) 620
Aor13HI TCCGGA 1 cut(s) 293
AoxI GGCC 6 cut(s) 201, 208, 222, 394, 437, 964
ApeKI GCWGC 4 cut(s) 449, 750, 763, 1006
ApoI RAATTY 1 cut(s) 680
ArsI GACNNNNNNTTYG 2 cut(s) 531, 563
AsiGI ACCGGT 1 cut(s) 1016
AspLEI GCGC 4 cut(s) 136, 352, 374, 617
AspS9I GGNCC 3 cut(s) 209, 437, 1022
AsuC2I CCSGG 1 cut(s) 561
AsuHPI GGTGA 3 cut(s) 136, 784, 890
AsuII TTCGAA 1 cut(s) 934
AvaI CYCGRG 1 cut(s) 620
AvaII GGWCC 1 cut(s) 1022
BalI TGGCCA 1 cut(s) 203
BamHI GGATCC 1 cut(s) 7
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 1 cut(s) 976
BauI CACGAG 1 cut(s) 918
BbsI GAAGAC 1 cut(s) 917
BbvI GCAGC 4 cut(s) 461, 762, 775, 993
BccI CCATC 1 cut(s) 578
BceAI ACGGC 1 cut(s) 209
BciT130I CCWGG 1 cut(s) 377
BcnI CCSGG 1 cut(s) 561
BcoDI GTCTC 2 cut(s) 823, 847
BfaI CTAG 2 cut(s) 138, 896
BfmI CTRYAG 1 cut(s) 367
BfoI RGCGCY 3 cut(s) 353, 375, 618
BfuAI ACCTGC 1 cut(s) 182
BisI GCNGC 7 cut(s) 132, 450, 687, 751, 764, 1007, 1035
BlsI GCNGC 7 cut(s) 133, 451, 688, 752, 765, 1008, 1036
BmcAI AGTACT 1 cut(s) 419
Bme1390I CCNGG 2 cut(s) 377, 561
Bme18I GGWCC 1 cut(s) 1022
BmeT110I CYCGRG 1 cut(s) 620
BmgT120I GGNCC 3 cut(s) 209, 437, 1022
BmiI GGNNCC 4 cut(s) 9, 351, 663, 952
BmrFI CCNGG 2 cut(s) 377, 561
BmsI GCATC 5 cut(s) 95, 107, 333, 497, 871
BpiI GAAGAC 1 cut(s) 917
BplI GAGNNNNNCTC 2 cut(s) 143, 175
Bpu14I TTCGAA 1 cut(s) 934
BpuMI CCSGG 1 cut(s) 561
BsaHI GRCGYC 2 cut(s) 350, 655
BsaI GGTCTC 1 cut(s) 847
BsaJI CCNNGG 5 cut(s) 375, 376, 525, 861, 1050
BsaWI WCCGGW 2 cut(s) 293, 1016
BsaXI ACNNNNNCTCC 2 cut(s) 858, 888
Bsc4I CCNNNNNNNGG 2 cut(s) 650, 1016
Bse118I RCCGGY 1 cut(s) 1016
Bse1I ACTGG 2 cut(s) 211, 783
Bse3DI GCAATG 3 cut(s) 429, 501, 752
BseAI TCCGGA 1 cut(s) 293
BseBI CCWGG 1 cut(s) 377
BseDI CCNNGG 5 cut(s) 375, 376, 525, 861, 1050
BseGI GGATG 3 cut(s) 244, 290, 726
BseLI CCNNNNNNNGG 2 cut(s) 650, 1016
BseMI GCAATG 3 cut(s) 429, 501, 752
BseMII CTCAG 2 cut(s) 569, 970
BseNI ACTGG 2 cut(s) 211, 783
BseRI GAGGAG 1 cut(s) 35
BseXI GCAGC 4 cut(s) 461, 762, 775, 993
BseYI CCCAGC 4 cut(s) 164, 345, 766, 826
BsgI GTGCAG 1 cut(s) 981
Bsh1236I CGCG 1 cut(s) 134
BshFI GGCC 6 cut(s) 203, 210, 224, 396, 439, 966
BshNI GGYRCC 1 cut(s) 349
BshTI ACCGGT 1 cut(s) 1016
BsiHKCI CYCGRG 1 cut(s) 620
BsiSI CCGG 3 cut(s) 294, 561, 1017
BslFI GGGAC 2 cut(s) 507, 666
BslI CCNNNNNNNGG 2 cut(s) 650, 1016
BsmAI GTCTC 2 cut(s) 823, 847
BsmFI GGGAC 2 cut(s) 507, 666
BsnI GGCC 6 cut(s) 203, 210, 224, 396, 439, 966
Bso31I GGTCTC 1 cut(s) 847
BsoBI CYCGRG 1 cut(s) 620
Bsp119I TTCGAA 1 cut(s) 934
Bsp1286I GDGCHC 1 cut(s) 976
Bsp13I TCCGGA 1 cut(s) 293
Bsp1407I TGTACA 2 cut(s) 627, 714
Bsp143I GATC 4 cut(s) 7, 360, 468, 597
Bsp19I CCATGG 1 cut(s) 525
BspACI CCGC 5 cut(s) 5, 132, 686, 1032, 1035
BspANI GGCC 6 cut(s) 203, 210, 224, 396, 439, 966
BspCNI CTCAG 2 cut(s) 568, 969
BspEI TCCGGA 1 cut(s) 293
BspFNI CGCG 1 cut(s) 134
BspHI TCATGA 1 cut(s) 942
BspLI GGNNCC 4 cut(s) 9, 351, 663, 952
BspMI ACCTGC 1 cut(s) 182
BspPI GGATC 2 cut(s) 2, 15
BspT104I TTCGAA 1 cut(s) 934
BspT107I GGYRCC 1 cut(s) 349
BspTNI GGTCTC 1 cut(s) 847
BsrDI GCAATG 3 cut(s) 429, 501, 752
BsrFI RCCGGY 1 cut(s) 1016
BsrGI TGTACA 2 cut(s) 627, 714
BsrI ACTGG 2 cut(s) 211, 783
BssAI RCCGGY 1 cut(s) 1016
BssECI CCNNGG 5 cut(s) 375, 376, 525, 861, 1050
BssMI GATC 4 cut(s) 7, 360, 468, 597
BssNI GRCGYC 2 cut(s) 350, 655
BssSI CACGAG 1 cut(s) 918
BssT1I CCWWGG 3 cut(s) 525, 861, 1050
Bst2BI CACGAG 1 cut(s) 918
Bst2UI CCWGG 1 cut(s) 377
Bst4CI ACNGT 2 cut(s) 111, 874
Bst6I CTCTTC 2 cut(s) 70, 936
BstACI GRCGYC 2 cut(s) 350, 655
BstAPI GCANNNNNTGC 1 cut(s) 485
BstAUI TGTACA 2 cut(s) 627, 714
BstBI TTCGAA 1 cut(s) 934
BstC8I GCNNGC 4 cut(s) 201, 481, 964, 1047
BstDEI CTNAG 2 cut(s) 555, 956
BstDSI CCRYGG 1 cut(s) 525
BstF5I GGATG 3 cut(s) 244, 290, 726
BstFNI CGCG 1 cut(s) 134
BstH2I RGCGCY 3 cut(s) 353, 375, 618
BstHHI GCGC 4 cut(s) 136, 352, 374, 617
BstKTI GATC 4 cut(s) 10, 363, 471, 600
BstMAI GTCTC 2 cut(s) 823, 847
BstMBI GATC 4 cut(s) 7, 360, 468, 597
BstMWI GCNNNNNNNGC 6 cut(s) 104, 380, 485, 512, 866, 1034
BstNI CCWGG 1 cut(s) 377
BstNSI RCATGY 1 cut(s) 725
BstSCI CCNGG 2 cut(s) 375, 559
BstSFI CTRYAG 1 cut(s) 367
BstUI CGCG 1 cut(s) 134
BstV1I GCAGC 4 cut(s) 461, 762, 775, 993
BstV2I GAAGAC 1 cut(s) 917
BstX2I RGATCY 1 cut(s) 7
BstXI CCANNNNNNTGG 2 cut(s) 383, 577
BstYI RGATCY 1 cut(s) 7
BsuRI GGCC 6 cut(s) 203, 210, 224, 396, 439, 966
BtgI CCRYGG 1 cut(s) 525
BtsCI GGATG 3 cut(s) 244, 290, 726
BtsIMutI CAGTG 3 cut(s) 204, 790, 964
BveI ACCTGC 1 cut(s) 182
Cac8I GCNNGC 4 cut(s) 201, 481, 964, 1047
CaiI CAGNNNCTG 1 cut(s) 485
CciI TCATGA 1 cut(s) 942
CfoI GCGC 4 cut(s) 136, 352, 374, 617
Cfr10I RCCGGY 1 cut(s) 1016
Cfr13I GGNCC 3 cut(s) 209, 437, 1022
CseI GACGC 1 cut(s) 274
Csp6I GTAC 7 cut(s) 157, 169, 277, 418, 457, 628, 715
CspAI ACCGGT 1 cut(s) 1016
CspCI CAANNNNNGTGG 1 cut(s) 1027
CviAII CATG 3 cut(s) 526, 722, 943
CviQI GTAC 7 cut(s) 157, 169, 277, 418, 457, 628, 715
DdeI CTNAG 2 cut(s) 555, 956
DinI GGCGCC 1 cut(s) 351
DpnI GATC 4 cut(s) 9, 362, 470, 599
DpnII GATC 4 cut(s) 7, 360, 468, 597
DrdI GACNNNNNNGTC 1 cut(s) 839
DseDI GACNNNNNNGTC 1 cut(s) 839
EaeI YGGCCR 2 cut(s) 201, 222
Eam1104I CTCTTC 2 cut(s) 70, 936
EarI CTCTTC 2 cut(s) 70, 936
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 3 cut(s) 525, 861, 1050
Eco24I GRGCYC 1 cut(s) 976
Eco31I GGTCTC 1 cut(s) 847
Eco47I GGWCC 1 cut(s) 1022
Eco57I CTGAAG 1 cut(s) 516
Eco88I CYCGRG 1 cut(s) 620
EcoRII CCWGG 1 cut(s) 375
EcoT14I CCWWGG 3 cut(s) 525, 861, 1050
EcoT22I ATGCAT 1 cut(s) 100
EcoT38I GRGCYC 1 cut(s) 976
EgeI GGCGCC 1 cut(s) 351
EheI GGCGCC 1 cut(s) 351
ErhI CCWWGG 3 cut(s) 525, 861, 1050
FaeI CATG 3 cut(s) 529, 725, 946
FaqI GGGAC 2 cut(s) 507, 666
FatI CATG 3 cut(s) 525, 721, 942
FauI CCCGC 1 cut(s) 1039
FauNDI CATATG 1 cut(s) 219
Fnu4HI GCNGC 7 cut(s) 132, 450, 687, 751, 764, 1007, 1035
FokI GGATG 3 cut(s) 251, 277, 713
FriOI GRGCYC 1 cut(s) 976
Fsp4HI GCNGC 7 cut(s) 132, 450, 687, 751, 764, 1007, 1035
FspBI CTAG 2 cut(s) 138, 896
GlaI GCGC 4 cut(s) 135, 351, 373, 616
GluI GCNGC 7 cut(s) 132, 450, 687, 751, 764, 1007, 1035
GsaI CCCAGC 4 cut(s) 168, 349, 770, 830
HaeII RGCGCY 3 cut(s) 353, 375, 618
HaeIII GGCC 6 cut(s) 203, 210, 224, 396, 439, 966
HapII CCGG 3 cut(s) 294, 561, 1017
HgaI GACGC 1 cut(s) 274
HhaI GCGC 4 cut(s) 136, 352, 374, 617
Hin1I GRCGYC 2 cut(s) 350, 655
Hin1II CATG 3 cut(s) 529, 725, 946
Hin6I GCGC 4 cut(s) 134, 350, 372, 615
HinP1I GCGC 4 cut(s) 134, 350, 372, 615
HindIII AAGCTT 1 cut(s) 52
HpaII CCGG 3 cut(s) 294, 561, 1017
HphI GGTGA 3 cut(s) 136, 784, 890
Hpy188I TCNGA 2 cut(s) 329, 610
Hpy188III TCNNGA 5 cut(s) 117, 294, 412, 694, 943
HpyAV CCTTC 3 cut(s) 139, 307, 605
HpyCH4III ACNGT 2 cut(s) 111, 874
HpyCH4IV ACGT 1 cut(s) 655
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 380, 485, 512, 866, 1034
HpyF3I CTNAG 2 cut(s) 555, 956
HpySE526I ACGT 1 cut(s) 655
Hsp92I GRCGYC 2 cut(s) 350, 655
Hsp92II CATG 3 cut(s) 529, 725, 946
HspAI GCGC 4 cut(s) 134, 350, 372, 615
KasI GGCGCC 1 cut(s) 349
Kpn2I TCCGGA 1 cut(s) 293
Kzo9I GATC 4 cut(s) 7, 360, 468, 597
LmnI GCTCC 3 cut(s) 316, 866, 1033
Lsp1109I GCAGC 4 cut(s) 461, 762, 775, 993
LweI GCATC 5 cut(s) 95, 107, 333, 497, 871
MaeI CTAG 2 cut(s) 138, 896
MaeII ACGT 1 cut(s) 655
MaeIII GTNAC 2 cut(s) 226, 286
MalI GATC 4 cut(s) 9, 362, 470, 599
MboI GATC 4 cut(s) 7, 360, 468, 597
MboII GAAGA 6 cut(s) 57, 63, 66, 901, 917, 923
MflI RGATCY 1 cut(s) 7
MhlI GDGCHC 1 cut(s) 976
MlsI TGGCCA 1 cut(s) 203
MluCI AATT 2 cut(s) 270, 680
MluNI TGGCCA 1 cut(s) 203
Mly113I GGCGCC 1 cut(s) 350
Mox20I TGGCCA 1 cut(s) 203
Mph1103I ATGCAT 1 cut(s) 100
MroI TCCGGA 1 cut(s) 293
MscI TGGCCA 1 cut(s) 203
MseI TTAA 1 cut(s) 273
MslI CAYNNNNRTG 1 cut(s) 233
Msp20I TGGCCA 1 cut(s) 203
MspA1I CMGCKG 3 cut(s) 494, 766, 830
MspI CCGG 3 cut(s) 294, 561, 1017
MspR9I CCNGG 2 cut(s) 377, 561
MvaI CCWGG 1 cut(s) 377
MvnI CGCG 1 cut(s) 134
MwoI GCNNNNNNNGC 6 cut(s) 104, 380, 485, 512, 866, 1034
NarI GGCGCC 1 cut(s) 350
NciI CCSGG 1 cut(s) 561
NcoI CCATGG 1 cut(s) 525
NdeI CATATG 1 cut(s) 219
NdeII GATC 4 cut(s) 7, 360, 468, 597
NlaIII CATG 3 cut(s) 529, 725, 946
NlaIV GGNNCC 4 cut(s) 9, 351, 663, 952
NmuCI GTSAC 2 cut(s) 226, 286
NsiI ATGCAT 1 cut(s) 100
NspI RCATGY 1 cut(s) 725
NspV TTCGAA 1 cut(s) 934
PagI TCATGA 1 cut(s) 942
PasI CCCWGGG 1 cut(s) 376
PinAI ACCGGT 1 cut(s) 1016
PkrI GCNGC 7 cut(s) 133, 451, 688, 752, 765, 1008, 1036
PluTI GGCGCC 1 cut(s) 353
Psp6I CCWGG 1 cut(s) 375
PspFI CCCAGC 4 cut(s) 164, 345, 766, 826
PspGI CCWGG 1 cut(s) 375
PspN4I GGNNCC 4 cut(s) 9, 351, 663, 952
PspPI GGNCC 3 cut(s) 209, 437, 1022
PstNI CAGNNNCTG 1 cut(s) 485
PsuI RGATCY 1 cut(s) 7
PvuII CAGCTG 3 cut(s) 494, 766, 830
RsaI GTAC 7 cut(s) 158, 170, 278, 419, 458, 629, 716
RsaNI GTAC 7 cut(s) 157, 169, 277, 418, 457, 628, 715
RseI CAYNNNNRTG 1 cut(s) 233
SaqAI TTAA 1 cut(s) 273
SatI GCNGC 7 cut(s) 132, 450, 687, 751, 764, 1007, 1035
Sau3AI GATC 4 cut(s) 7, 360, 468, 597
Sau96I GGNCC 3 cut(s) 209, 437, 1022
ScaI AGTACT 1 cut(s) 419
ScrFI CCNGG 2 cut(s) 377, 561
SduI GDGCHC 1 cut(s) 976
SfaNI GCATC 5 cut(s) 95, 107, 333, 497, 871
SfcI CTRYAG 1 cut(s) 367
SfoI GGCGCC 1 cut(s) 351
SfuI TTCGAA 1 cut(s) 934
SinI GGWCC 1 cut(s) 1022
SmiMI CAYNNNNRTG 1 cut(s) 233
Sse9I AATT 2 cut(s) 270, 680
SsiI CCGC 5 cut(s) 5, 132, 686, 1032, 1035
SspDI GGCGCC 1 cut(s) 349
SspI AATATT 1 cut(s) 939
SspMI CTAG 2 cut(s) 138, 896
StyD4I CCNGG 2 cut(s) 375, 559
StyI CCWWGG 3 cut(s) 525, 861, 1050
TaaI ACNGT 2 cut(s) 111, 874
TaiI ACGT 1 cut(s) 658
TaqI TCGA 3 cut(s) 693, 705, 934
TasI AATT 2 cut(s) 270, 680
TatI WGTACW 6 cut(s) 156, 276, 417, 456, 627, 714
TauI GCSGC 3 cut(s) 134, 689, 1037
Tru1I TTAA 1 cut(s) 273
Tru9I TTAA 1 cut(s) 273
TscAI CASTG 3 cut(s) 211, 790, 964
TseFI GTSAC 2 cut(s) 226, 286
TseI GCWGC 4 cut(s) 449, 750, 763, 1006
Tsp45I GTSAC 2 cut(s) 226, 286
TspDTI ATGAA 3 cut(s) 57, 692, 931
TspRI CASTG 3 cut(s) 211, 790, 964
VpaK11BI GGWCC 1 cut(s) 1022
XapI RAATTY 1 cut(s) 680
XceI RCATGY 1 cut(s) 725
XspI CTAG 2 cut(s) 138, 896
ZraI GACGTC 1 cut(s) 656
ZrmI AGTACT 1 cut(s) 419
Zsp2I ATGCAT 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.