Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0003118

Physical Location & Seq

Genomic Coordinates Forward (+)

17556753 .. 17558943

Gene Structure 2191 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g12440.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGCAGATCCACTCAGCAACTCTCGTCGCCACTCTCTCGTCCCAAGCTTCTTGTACTCTTCATCTTCTTCAATAACGACGAGTACTGATGCACTGCGGCCGTCGGTTTCATCGTCGTTGGTGGGGGCAGCGTTATTGTCGAAAAGAGTGGTGGTTCCGGCGCCTAAAGAGAAGGTGGAGATGTACTCGGCGGGGTTTTACGCCGCGTGTGGCGTAGGAGGGATGTTGAGCACCGGACTCACCCACTTGGCTGTCACCCCGATCGATCTCGTCAAGTGTAATATGCAGATTGACCCAATCAAGTACAAGAGCATCACATCCGGATTCGGAGTTCTGCTCAAGGAGCAGGGCATTAGGGGTTTGTTCAAAGGTTGGGCACCAACCTGGGCTGGTTACAGTGTTCAGGGAGCCGGCAAGTTCGGGCTCTACGAGTTCTTCAAGAAGTACTACAGCGACGTTGCCGGCCCTGAGTATGCAGCCAAGTACAAAACATTGATCGACCTTGCAGGTTCTGCATCAGCTGAAGTCATTGCCGATGTCGCCCTCTGTCCTATGGAAGCCGTCAAAGTTCGCGTCCAAACTCAGCCCGGTTTTGCCAGAGGCTTGACTGTGGCCTTCCGAAGTTCATCAAATCCGAAGGCGCTCTTGGGTTGTACAAAGGGATGGTTCCGCTCTGGGGACGTCAAGTTCCTTACTATGATGAAATTCGCGTCTTTTGAGACGATTATCGAGCTCATGTACAAGCATGCCATCCCAACACCTAAAGAGCAATGCAGCAAACCCTTGCAGCTGGGTGTGAGCTTTGCTAGCGGGTACATTGCTGGTGTGTTCTGTGCTGTTGTCTCGCACCCAGCCGACAACTTGGTCTCCTTCCTCAACAATGCCAAGGGAGCAACCGTTGGCGAAGCTCTGAAGAAACTGGGAGTTTTAGGTCTTTTCACCCGAGGCCTTCCTCTGCGAATCGTCATGATCGGAACCCTCACCGGAGGCCAATGGGTTATCTATGATGCTTTCAAAGTTTTTGTAGGGCTGCCGACTACTGGTGGTCCTGCTCCTGCTGCTGCCGCCATCAAGGTTGCCAACACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006839 GO:0006950 GO:0006970 GO:0008150 GO:0008509 GO:0009628 GO:0009651 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0035435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0098656 GO:0098660 GO:0098661

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

363

Amino Acids

38.35

Weight (kDa)

9.55

Isoelectric Point (pI)

28.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48850
fragaria_vesca	FvH4_5g09180
malus_domestica	MD06G1133000.v1.1 MD14G1149100.v1.1 MD14G1149200.v1.1
prunus_persica	Prupe.5G143800_v2.0.a1 Prupe.5G143800_v2.0.a1 Prupe.5G144200_v2.0.a1
pyrus_communis	pycom06g12440 pycom14g12400
rosa_chinensis	RchiOBHm_Chr3g0469101 RchiOBHm_Chr7g0189001
rosa_laevigata	RLG00000004644 RLG00000024373 RLG00000024376 RLG00000024384 RLG00000024387
rosa_multiflora	Rmu_sc0000302.1_g000019 Rmu_sc0000302.1_g000040 Rmu_sc0007139.1_g000006 Rmu_sc0007933.1_g000010 Rmu_sc0008582.1_g000005
rosa_roxburghii	Rroxscaffold_3G00265880 Rroxscaffold_6G00412220
rosa_rugosa	Rorug03G0099100 Rorug03G0099100 Rorug03G0099500 Rorug03G0099600 Rorug06G0495300
rosa_samantha	Rh3DG203500 Rh7AG100000 Rh7BG102200 Rh7CG103500 Rh7DG102000
rosa_wichuraiana	Rw3G014010 Rw3G014030 Rw7G008630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	863
AatII	GACGTC	1 cut(s)	684
Acc36I	ACCTGC	1 cut(s)	497
AccB1I	GGYRCC	2 cut(s)	160, 376
AccBSI	CCGCTC	1 cut(s)	672
AccII	CGCG	3 cut(s)	206, 573, 710
AccIII	TCCGGA	1 cut(s)	320
AciI	CCGC	6 cut(s)	97, 191, 204, 670, 810, 1065
AclWI	GGATC	1 cut(s)	2
AcoI	YGGCCR	1 cut(s)	98
AcsI	RAATTY	1 cut(s)	704
AcuI	CTGAAG	2 cut(s)	543, 932
AcyI	GRCGYC	2 cut(s)	161, 681
AfaI	GTAC	9 cut(s)	56, 85, 185, 305, 446, 485, 655, 740, 815
AfiI	CCNNNNNNNGG	2 cut(s)	676, 1040
AgsI	TTSAA	4 cut(s)	72, 367, 439, 1015
AjnI	CCWGG	1 cut(s)	383
AjuI	GAANNNNNNNTTGG	2 cut(s)	629, 661
AloI	GAACNNNNNNTCC	4 cut(s)	315, 347, 671, 703
AluBI	AGCT	6 cut(s)	48, 521, 733, 790, 801, 908
AluI	AGCT	6 cut(s)	48, 521, 733, 790, 801, 908
Alw21I	GWGCWC	2 cut(s)	233, 735
Alw26I	GTCTC	3 cut(s)	713, 847, 871
AlwI	GGATC	1 cut(s)	2
AlwNI	CAGNNNCTG	1 cut(s)	512
Ama87I	CYCGRG	1 cut(s)	942
Aor13HI	TCCGGA	1 cut(s)	320
AoxI	GGCC	5 cut(s)	98, 463, 612, 946, 988
ApeKI	GCWGC	7 cut(s)	128, 476, 774, 787, 1030, 1058, 1061
ApoI	RAATTY	1 cut(s)	704
ArsI	GACNNNNNNTTYG	2 cut(s)	558, 590
AspLEI	GCGC	2 cut(s)	163, 643
AspS9I	GGNCC	2 cut(s)	464, 1046
AsuC2I	CCSGG	1 cut(s)	588
AsuHPI	GGTGA	4 cut(s)	232, 247, 931, 973
AsuNHI	GCTAGC	1 cut(s)	806
AvaI	CYCGRG	1 cut(s)	942
AvaII	GGWCC	1 cut(s)	1046
BaeGI	GKGCMC	1 cut(s)	379
BanI	GGYRCC	2 cut(s)	160, 376
BanII	GRGCYC	2 cut(s)	426, 735
Bbv12I	GWGCWC	2 cut(s)	233, 735
BbvI	GCAGC	7 cut(s)	140, 488, 786, 799, 1017, 1045, 1048
BccI	CCATC	3 cut(s)	657, 758, 1076
BceAI	ACGGC	2 cut(s)	85, 545
BciT130I	CCWGG	1 cut(s)	385
BcnI	CCSGG	1 cut(s)	588
BcoDI	GTCTC	3 cut(s)	713, 847, 871
BfaI	CTAG	1 cut(s)	807
BfmI	CTRYAG	1 cut(s)	448
BfoI	RGCGCY	2 cut(s)	164, 644
BfuAI	ACCTGC	1 cut(s)	497
BmcAI	AGTACT	2 cut(s)	85, 446
Bme1390I	CCNGG	2 cut(s)	385, 588
Bme18I	GGWCC	1 cut(s)	1046
BmeT110I	CYCGRG	1 cut(s)	942
BmgT120I	GGNCC	2 cut(s)	464, 1046
BmiI	GGNNCC	6 cut(s)	156, 162, 378, 409, 668, 976
BmrFI	CCNGG	2 cut(s)	385, 588
BmrI	ACTGGG	1 cut(s)	929
BmsI	GCATC	4 cut(s)	79, 321, 524, 997
BmtI	GCTAGC	1 cut(s)	810
BmuI	ACTGGG	1 cut(s)	929
BplI	GAGNNNNNCTC	4 cut(s)	170, 202, 321, 353
BpuEI	CTTGAG	1 cut(s)	323
BpuMI	CCSGG	1 cut(s)	588
Bsa29I	ATCGAT	1 cut(s)	264
BsaHI	GRCGYC	2 cut(s)	161, 681
BsaI	GGTCTC	1 cut(s)	871
BsaJI	CCNNGG	3 cut(s)	384, 885, 943
BsaWI	WCCGGW	3 cut(s)	233, 320, 983
BsaXI	ACNNNNNCTCC	4 cut(s)	851, 881, 882, 912
Bsc4I	CCNNNNNNNGG	2 cut(s)	676, 1040
Bse118I	RCCGGY	2 cut(s)	410, 461
Bse1I	ACTGG	2 cut(s)	924, 1045
Bse3DI	GCAATG	3 cut(s)	528, 776, 816
BseAI	TCCGGA	1 cut(s)	320
BseBI	CCWGG	1 cut(s)	385
BseCI	ATCGAT	1 cut(s)	264
BseDI	CCNNGG	3 cut(s)	384, 885, 943
BseGI	GGATG	4 cut(s)	228, 317, 668, 750
BseLI	CCNNNNNNNGG	2 cut(s)	676, 1040
BseMI	GCAATG	3 cut(s)	528, 776, 816
BseMII	CTCAG	3 cut(s)	28, 459, 596
BseNI	ACTGG	2 cut(s)	924, 1045
BseSI	GKGCMC	1 cut(s)	379
BseX3I	CGGCCG	1 cut(s)	98
BseXI	GCAGC	7 cut(s)	140, 488, 786, 799, 1017, 1045, 1048
BseYI	CCCAGC	2 cut(s)	790, 850
Bsh1236I	CGCG	3 cut(s)	206, 573, 710
Bsh1285I	CGRYCG	2 cut(s)	101, 264
BshFI	GGCC	5 cut(s)	100, 465, 614, 948, 990
BshNI	GGYRCC	2 cut(s)	160, 376
BshVI	ATCGAT	1 cut(s)	264
BsiEI	CGRYCG	2 cut(s)	101, 264
BsiHKAI	GWGCWC	2 cut(s)	233, 735
BsiHKCI	CYCGRG	1 cut(s)	942
BsiSI	CCGG	7 cut(s)	158, 234, 321, 411, 462, 588, 984
BslFI	GGGAC	2 cut(s)	26, 692
BslI	CCNNNNNNNGG	2 cut(s)	676, 1040
BsmAI	GTCTC	3 cut(s)	713, 847, 871
BsmBI	CGTCTC	1 cut(s)	713
BsmFI	GGGAC	2 cut(s)	26, 692
BsnI	GGCC	5 cut(s)	100, 465, 614, 948, 990
Bso31I	GGTCTC	1 cut(s)	871
BsoBI	CYCGRG	1 cut(s)	942
Bsp1286I	GDGCHC	4 cut(s)	233, 379, 426, 735
Bsp13I	TCCGGA	1 cut(s)	320
Bsp1407I	TGTACA	2 cut(s)	653, 738
Bsp143I	GATC	5 cut(s)	7, 261, 265, 495, 969
BspACI	CCGC	6 cut(s)	97, 191, 204, 670, 810, 1065
BspANI	GGCC	5 cut(s)	100, 465, 614, 948, 990
BspCNI	CTCAG	3 cut(s)	27, 460, 595
BspDI	ATCGAT	1 cut(s)	264
BspEI	TCCGGA	1 cut(s)	320
BspFNI	CGCG	3 cut(s)	206, 573, 710
BspHI	TCATGA	1 cut(s)	966
BspLI	GGNNCC	6 cut(s)	156, 162, 378, 409, 668, 976
BspMI	ACCTGC	1 cut(s)	497
BspOI	GCTAGC	1 cut(s)	810
BspPI	GGATC	1 cut(s)	2
BspT107I	GGYRCC	2 cut(s)	160, 376
BspTNI	GGTCTC	1 cut(s)	871
BsrBI	CCGCTC	1 cut(s)	672
BsrDI	GCAATG	3 cut(s)	528, 776, 816
BsrFI	RCCGGY	2 cut(s)	410, 461
BsrGI	TGTACA	2 cut(s)	653, 738
BsrI	ACTGG	2 cut(s)	924, 1045
BssAI	RCCGGY	2 cut(s)	410, 461
BssECI	CCNNGG	3 cut(s)	384, 885, 943
BssMI	GATC	5 cut(s)	7, 261, 265, 495, 969
BssNI	GRCGYC	2 cut(s)	161, 681
BssT1I	CCWWGG	1 cut(s)	885
Bst2UI	CCWGG	1 cut(s)	385
Bst4CI	ACNGT	3 cut(s)	398, 610, 898
Bst6I	CTCTTC	1 cut(s)	64
BstACI	GRCGYC	2 cut(s)	161, 681
BstAPI	GCANNNNNTGC	1 cut(s)	512
BstAUI	TGTACA	2 cut(s)	653, 738
BstC8I	GCNNGC	4 cut(s)	412, 463, 747, 808
BstDEI	CTNAG	3 cut(s)	14, 468, 582
BstF5I	GGATG	4 cut(s)	228, 317, 668, 750
BstFNI	CGCG	3 cut(s)	206, 573, 710
BstH2I	RGCGCY	2 cut(s)	164, 644
BstHHI	GCGC	2 cut(s)	163, 643
BstKTI	GATC	5 cut(s)	10, 264, 268, 498, 972
BstMAI	GTCTC	3 cut(s)	713, 847, 871
BstMBI	GATC	5 cut(s)	7, 261, 265, 495, 969
BstMCI	CGRYCG	2 cut(s)	101, 264
BstMWI	GCNNNNNNNGC	7 cut(s)	343, 512, 539, 807, 890, 1058, 1064
BstNI	CCWGG	1 cut(s)	385
BstNSI	RCATGY	1 cut(s)	749
BstSCI	CCNGG	2 cut(s)	383, 586
BstSFI	CTRYAG	1 cut(s)	448
BstSLI	GKGCMC	1 cut(s)	379
BstUI	CGCG	3 cut(s)	206, 573, 710
BstV1I	GCAGC	7 cut(s)	140, 488, 786, 799, 1017, 1045, 1048
BstX2I	RGATCY	1 cut(s)	7
BstYI	RGATCY	1 cut(s)	7
BstZI	CGGCCG	1 cut(s)	98
Bsu15I	ATCGAT	1 cut(s)	264
BsuRI	GGCC	5 cut(s)	100, 465, 614, 948, 990
BsuTUI	ATCGAT	1 cut(s)	264
BtsCI	GGATG	4 cut(s)	228, 317, 668, 750
BtsI	GCAGTG	1 cut(s)	92
BtsIMutI	CAGTG	2 cut(s)	92, 403
BveI	ACCTGC	1 cut(s)	497
Cac8I	GCNNGC	4 cut(s)	412, 463, 747, 808
CaiI	CAGNNNCTG	1 cut(s)	512
CciI	TCATGA	1 cut(s)	966
CfoI	GCGC	2 cut(s)	163, 643
Cfr10I	RCCGGY	2 cut(s)	410, 461
Cfr13I	GGNCC	2 cut(s)	464, 1046
ClaI	ATCGAT	1 cut(s)	264
CseI	GACGC	2 cut(s)	562, 699
Csp6I	GTAC	9 cut(s)	55, 84, 184, 304, 445, 484, 654, 739, 814
CviAII	CATG	3 cut(s)	736, 746, 967
CviQI	GTAC	9 cut(s)	55, 84, 184, 304, 445, 484, 654, 739, 814
DdeI	CTNAG	3 cut(s)	14, 468, 582
DinI	GGCGCC	1 cut(s)	162
DpnI	GATC	5 cut(s)	9, 263, 267, 497, 971
DpnII	GATC	5 cut(s)	7, 261, 265, 495, 969
DrdI	GACNNNNNNGTC	1 cut(s)	863
DseDI	GACNNNNNNGTC	1 cut(s)	863
EaeI	YGGCCR	1 cut(s)	98
EagI	CGGCCG	1 cut(s)	98
Eam1104I	CTCTTC	1 cut(s)	64
EarI	CTCTTC	1 cut(s)	64
Ecl136II	GAGCTC	1 cut(s)	733
EclXI	CGGCCG	1 cut(s)	98
Eco130I	CCWWGG	1 cut(s)	885
Eco147I	AGGCCT	1 cut(s)	948
Eco24I	GRGCYC	2 cut(s)	426, 735
Eco31I	GGTCTC	1 cut(s)	871
Eco47I	GGWCC	1 cut(s)	1046
Eco52I	CGGCCG	1 cut(s)	98
Eco53kI	GAGCTC	1 cut(s)	733
Eco57I	CTGAAG	2 cut(s)	543, 932
Eco88I	CYCGRG	1 cut(s)	942
EcoICRI	GAGCTC	1 cut(s)	733
EcoRII	CCWGG	1 cut(s)	383
EcoT14I	CCWWGG	1 cut(s)	885
EcoT38I	GRGCYC	2 cut(s)	426, 735
EgeI	GGCGCC	1 cut(s)	162
EheI	GGCGCC	1 cut(s)	162
ErhI	CCWWGG	1 cut(s)	885
Esp3I	CGTCTC	1 cut(s)	713
FaeI	CATG	3 cut(s)	739, 749, 970
FaiI	YATR	8 cut(s)	284, 474, 554, 698, 737, 747, 968, 1005
FalI	AAGNNNNNCTT	2 cut(s)	629, 661
FaqI	GGGAC	2 cut(s)	26, 692
FatI	CATG	3 cut(s)	735, 745, 966
FauI	CCCGC	2 cut(s)	184, 803
FokI	GGATG	4 cut(s)	235, 304, 675, 737
FriOI	GRGCYC	2 cut(s)	426, 735
FspBI	CTAG	1 cut(s)	807
GlaI	GCGC	2 cut(s)	162, 642
GsaI	CCCAGC	2 cut(s)	794, 854
HaeII	RGCGCY	2 cut(s)	164, 644
HaeIII	GGCC	5 cut(s)	100, 465, 614, 948, 990
HapII	CCGG	7 cut(s)	158, 234, 321, 411, 462, 588, 984
HgaI	GACGC	2 cut(s)	562, 699
HhaI	GCGC	2 cut(s)	163, 643
Hin1I	GRCGYC	2 cut(s)	161, 681
Hin1II	CATG	3 cut(s)	739, 749, 970
Hin6I	GCGC	2 cut(s)	161, 641
HinP1I	GCGC	2 cut(s)	161, 641
HindIII	AAGCTT	1 cut(s)	46
HinfI	GANTC	3 cut(s)	237, 324, 960
HpaII	CCGG	7 cut(s)	158, 234, 321, 411, 462, 588, 984
HphI	GGTGA	4 cut(s)	232, 247, 931, 973
Hpy188I	TCNGA	5 cut(s)	329, 620, 636, 912, 974
Hpy188III	TCNNGA	3 cut(s)	321, 439, 967
Hpy99I	CGWCG	5 cut(s)	30, 82, 106, 118, 458
HpyAV	CCTTC	5 cut(s)	166, 625, 631, 880, 959
HpyCH4III	ACNGT	3 cut(s)	398, 610, 898
HpyCH4IV	ACGT	2 cut(s)	456, 681
HpyCH4V	TGCA	7 cut(s)	92, 286, 476, 506, 515, 774, 787
HpyF10VI	GCNNNNNNNGC	7 cut(s)	343, 512, 539, 807, 890, 1058, 1064
HpyF3I	CTNAG	3 cut(s)	14, 468, 582
HpySE526I	ACGT	2 cut(s)	456, 681
Hsp92I	GRCGYC	2 cut(s)	161, 681
Hsp92II	CATG	3 cut(s)	739, 749, 970
HspAI	GCGC	2 cut(s)	161, 641
KasI	GGCGCC	1 cut(s)	160
Kpn2I	TCCGGA	1 cut(s)	320
KroI	GCCGGC	2 cut(s)	410, 461
KroNI	GCCGGC	2 cut(s)	412, 463
Kzo9I	GATC	5 cut(s)	7, 261, 265, 495, 969
LmnI	GCTCC	4 cut(s)	343, 407, 890, 1057
Lsp1109I	GCAGC	7 cut(s)	140, 488, 786, 799, 1017, 1045, 1048
LweI	GCATC	4 cut(s)	79, 321, 524, 997
MaeI	CTAG	1 cut(s)	807
MaeII	ACGT	2 cut(s)	456, 681
MaeIII	GTNAC	2 cut(s)	253, 392
MalI	GATC	5 cut(s)	9, 263, 267, 497, 971
MbiI	CCGCTC	1 cut(s)	672
MboI	GATC	5 cut(s)	7, 261, 265, 495, 969
MboII	GAAGA	5 cut(s)	51, 57, 60, 427, 925
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	4 cut(s)	233, 379, 426, 735
MluCI	AATT	1 cut(s)	704
Mly113I	GGCGCC	1 cut(s)	161
MlyI	GAGTC	1 cut(s)	231
MnlI	CCTC	8 cut(s)	212, 554, 593, 884, 938, 963, 980, 989
MroI	TCCGGA	1 cut(s)	320
MroNI	GCCGGC	2 cut(s)	410, 461
MspA1I	CMGCKG	2 cut(s)	521, 790
MspI	CCGG	7 cut(s)	158, 234, 321, 411, 462, 588, 984
MspR9I	CCNGG	2 cut(s)	385, 588
MvaI	CCWGG	1 cut(s)	385
MvnI	CGCG	3 cut(s)	206, 573, 710
MwoI	GCNNNNNNNGC	7 cut(s)	343, 512, 539, 807, 890, 1058, 1064
NaeI	GCCGGC	2 cut(s)	412, 463
NarI	GGCGCC	1 cut(s)	161
NciI	CCSGG	1 cut(s)	588
NdeII	GATC	5 cut(s)	7, 261, 265, 495, 969
NgoMIV	GCCGGC	2 cut(s)	410, 461
NheI	GCTAGC	1 cut(s)	806
NlaIII	CATG	3 cut(s)	739, 749, 970
NlaIV	GGNNCC	6 cut(s)	156, 162, 378, 409, 668, 976
NmeAIII	GCCGAG	1 cut(s)	167
NmuCI	GTSAC	1 cut(s)	253
NspI	RCATGY	1 cut(s)	749
PaeI	GCATGC	1 cut(s)	749
PagI	TCATGA	1 cut(s)	966
PceI	AGGCCT	1 cut(s)	948
PcsI	WCGNNNNNNNCGW	2 cut(s)	110, 426
PdiI	GCCGGC	2 cut(s)	412, 463
PfeI	GAWTC	2 cut(s)	324, 960
Ple19I	CGATCG	1 cut(s)	264
PleI	GAGTC	1 cut(s)	231
PluTI	GGCGCC	1 cut(s)	164
PpsI	GAGTC	1 cut(s)	231
Psp124BI	GAGCTC	1 cut(s)	735
Psp6I	CCWGG	1 cut(s)	383
PspFI	CCCAGC	2 cut(s)	790, 850
PspGI	CCWGG	1 cut(s)	383
PspN4I	GGNNCC	6 cut(s)	156, 162, 378, 409, 668, 976
PspPI	GGNCC	2 cut(s)	464, 1046
PstNI	CAGNNNCTG	1 cut(s)	512
PsuI	RGATCY	1 cut(s)	7
PvuI	CGATCG	1 cut(s)	264
PvuII	CAGCTG	2 cut(s)	521, 790
RsaI	GTAC	9 cut(s)	56, 85, 185, 305, 446, 485, 655, 740, 815
RsaNI	GTAC	9 cut(s)	55, 84, 184, 304, 445, 484, 654, 739, 814
SacI	GAGCTC	1 cut(s)	735
Sau3AI	GATC	5 cut(s)	7, 261, 265, 495, 969
Sau96I	GGNCC	2 cut(s)	464, 1046
ScaI	AGTACT	2 cut(s)	85, 446
SchI	GAGTC	1 cut(s)	231
ScrFI	CCNGG	2 cut(s)	385, 588
SduI	GDGCHC	4 cut(s)	233, 379, 426, 735
SfaNI	GCATC	4 cut(s)	79, 321, 524, 997
SfcI	CTRYAG	1 cut(s)	448
SfoI	GGCGCC	1 cut(s)	162
SinI	GGWCC	1 cut(s)	1046
SmlI	CTYRAG	1 cut(s)	338
SmoI	CTYRAG	1 cut(s)	338
SphI	GCATGC	1 cut(s)	749
Sse9I	AATT	1 cut(s)	704
SseBI	AGGCCT	1 cut(s)	948
SsiI	CCGC	6 cut(s)	97, 191, 204, 670, 810, 1065
SspDI	GGCGCC	1 cut(s)	160
SspMI	CTAG	1 cut(s)	807
SstI	GAGCTC	1 cut(s)	735
StuI	AGGCCT	1 cut(s)	948
StyD4I	CCNGG	2 cut(s)	383, 586
StyI	CCWWGG	1 cut(s)	885
TaaI	ACNGT	3 cut(s)	398, 610, 898
TaiI	ACGT	2 cut(s)	459, 684
TaqI	TCGA	4 cut(s)	140, 264, 498, 729
TasI	AATT	1 cut(s)	704
TatI	WGTACW	8 cut(s)	54, 83, 183, 303, 444, 483, 653, 738
TauI	GCSGC	3 cut(s)	100, 206, 1067
TfiI	GAWTC	2 cut(s)	324, 960
TscAI	CASTG	2 cut(s)	99, 403
TseFI	GTSAC	1 cut(s)	253
TseI	GCWGC	7 cut(s)	128, 476, 774, 787, 1030, 1058, 1061
Tsp45I	GTSAC	1 cut(s)	253
TspDTI	ATGAA	4 cut(s)	51, 99, 615, 716
TspRI	CASTG	2 cut(s)	99, 403
VpaK11BI	GGWCC	1 cut(s)	1046
XapI	RAATTY	1 cut(s)	704
XceI	RCATGY	1 cut(s)	749
XspI	CTAG	1 cut(s)	807
ZraI	GACGTC	1 cut(s)	682
ZrmI	AGTACT	2 cut(s)	85, 446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.