pycom14g12400

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
15402392 .. 15404984
2593 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g12400.1

Sequence Viewer

Length: 1083 bp
ATGGCAGATTCTCTCAGCAACGCTCATCGCCACTCTCTCGTCCCAAGCTTCTTGTACTCTTCTTCTTCTTCTTCTTCAATGAGGACAAGTACTGATGCATCGCCGCCCTCGGTTTCATCATCGTCGGCGGTGGCTTTGTTGTCGAAAAGGGTTGTGGTTCCGGCGCCTAAAGAGAAGTTGGAGATGTACTCCCCGGCGTTCTACGCGGCGTGCGGAGTAGCAGGGATGTTGAGCACCGGATTCACTCACACGGCCGTCACGCCTATCGATGTCATCAAGTGTAATATGCAGATTGACCCAATCAAGTACAATAGCATCACATCCGGATTCAGAGTTATGCTCAAGGAGCAGGGCATAAGAGGTTTCTTCAAAGGTTGGGCACCAACTTTTGTTGGTTACAGTGCCCAGGGAGCCGGCAAGTTCGGATTCTACGAGTTCTTCAAGAAGTACTACTCAGACATTGCTGGCCCCGAGTACGCAGCCAAGTACAAAACATTGATCTATCTTGCAGGTTCTGCATCAGCTGAAGTCATTGCCGATGTTGCCCTCTGTCCTATGGAAGCCGTCAAAGTTCGTGTCCAAACTCAGCCTGGTTTTGCCAGAGGCTTGGCTGATGGCTTCCCAAAGATCATCAAATCCGAAGGCGCACTTGGGTTGTATAAAGGGATGGTTCCGCTTTGGGGACGCCAGGTTCCTTATACTATGATGAAATTCGCATCTTTCGAGACTACTATCGAGCTCATGTACAAGCATGTAATCTCAACACCCAAAGAGCAATGCAGCATACCCTTGCAGCTGGGTGTGAGCTTTGCTAGTGGGTATATTGCTGGTGTGTTCTGTGCTGTTGTCTCACACCCAGCTGACAACTTGGTCTCCTTCCTCAACAATGCAAAGGGAGCAACCGTTGGTGATGCCGTGAAGAATCTGGGACTATTAGGTCTTTTCACCCGAGGGCTTCCTCTGCGTATCGTCATGGTCGGAACCCTAACCGGAGGTCAATGGGTTCTCTATGATGCTTTCAAAGTTCTTGTAGGGCTGCCGACTACTGGTGGTCCCGTCGCGGCCGAGGTTGCCAAGGCTTGA

Protein Analysis

361

Amino Acids

38.37

Weight (kDa)

9.31

Isoelectric Point (pI)

30.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 68 - 153 3.8e-23 Mitochondrial carrier protein
Mito_carr PF00153 164 - 251 1.2e-19 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 869, 936
Acc36I ACCTGC 1 cut(s) 500
AccB1I GGYRCC 2 cut(s) 163, 379
AccII CGCG 2 cut(s) 206, 1061
AccIII TCCGGA 1 cut(s) 323
AciI CCGC 6 cut(s) 104, 128, 206, 213, 674, 1061
AcoI YGGCCR 2 cut(s) 252, 1062
AcsI RAATTY 1 cut(s) 710
AcuI CTGAAG 1 cut(s) 546
AcyI GRCGYC 2 cut(s) 164, 685
AfaI GTAC 8 cut(s) 56, 91, 188, 308, 449, 476, 488, 746
AfiI CCNNNNNNNGG 2 cut(s) 680, 1046
AgsI TTSAA 4 cut(s) 78, 370, 442, 1021
AjnI CCWGG 3 cut(s) 405, 589, 687
AjuI GAANNNNNNNTTGG 2 cut(s) 633, 665
AloI GAACNNNNNNTCC 2 cut(s) 675, 707
AluBI AGCT 6 cut(s) 48, 524, 739, 796, 807, 860
AluI AGCT 6 cut(s) 48, 524, 739, 796, 807, 860
Alw21I GWGCWC 2 cut(s) 236, 741
Alw26I GTCTC 3 cut(s) 719, 853, 877
AlwNI CAGNNNCTG 1 cut(s) 515
Ama87I CYCGRG 2 cut(s) 470, 948
Aor13HI TCCGGA 1 cut(s) 323
AoxI GGCC 3 cut(s) 252, 466, 1062
ApeKI GCWGC 4 cut(s) 479, 780, 793, 1036
ApoI RAATTY 1 cut(s) 710
ArsI GACNNNNNNTTYG 2 cut(s) 561, 593
AspLEI GCGC 2 cut(s) 166, 647
AspS9I GGNCC 2 cut(s) 467, 1052
AsuC2I CCSGG 1 cut(s) 194
AsuHPI GGTGA 2 cut(s) 920, 937
AvaI CYCGRG 2 cut(s) 470, 948
AvaII GGWCC 1 cut(s) 1052
BaeGI GKGCMC 2 cut(s) 382, 406
BanI GGYRCC 2 cut(s) 163, 379
BanII GRGCYC 1 cut(s) 741
Bbv12I GWGCWC 2 cut(s) 236, 741
BbvI GCAGC 4 cut(s) 491, 792, 805, 1023
BccI CCATC 2 cut(s) 608, 661
BceAI ACGGC 4 cut(s) 239, 267, 548, 899
BciT130I CCWGG 3 cut(s) 407, 591, 689
BcnI CCSGG 1 cut(s) 194
BcoDI GTCTC 3 cut(s) 719, 853, 877
BfaI CTAG 1 cut(s) 813
BfoI RGCGCY 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 500
BisI GCNGC 7 cut(s) 104, 207, 480, 781, 794, 1037, 1062
BlsI GCNGC 7 cut(s) 105, 208, 481, 782, 795, 1038, 1063
BmcAI AGTACT 2 cut(s) 91, 449
Bme1390I CCNGG 4 cut(s) 194, 407, 591, 689
Bme18I GGWCC 1 cut(s) 1052
BmeT110I CYCGRG 2 cut(s) 470, 948
BmgT120I GGNCC 2 cut(s) 467, 1052
BmiI GGNNCC 9 cut(s) 159, 165, 381, 412, 469, 672, 693, 982, 1054
BmrFI CCNGG 4 cut(s) 194, 407, 591, 689
BmsI GCATC 7 cut(s) 85, 107, 324, 527, 725, 901, 1003
BplI GAGNNNNNCTC 4 cut(s) 173, 205, 324, 356
BpuEI CTTGAG 1 cut(s) 326
BpuMI CCSGG 1 cut(s) 194
Bsa29I ATCGAT 1 cut(s) 267
BsaHI GRCGYC 2 cut(s) 164, 685
BsaI GGTCTC 1 cut(s) 877
BsaJI CCNNGG 7 cut(s) 108, 192, 405, 406, 949, 1065, 1074
BsaWI WCCGGW 3 cut(s) 236, 323, 989
BsaXI ACNNNNNCTCC 4 cut(s) 857, 887, 888, 918
Bsc4I CCNNNNNNNGG 2 cut(s) 680, 1046
Bse118I RCCGGY 1 cut(s) 413
Bse1I ACTGG 1 cut(s) 1051
Bse3DI GCAATG 3 cut(s) 459, 531, 782
BseAI TCCGGA 1 cut(s) 323
BseBI CCWGG 3 cut(s) 407, 591, 689
BseCI ATCGAT 1 cut(s) 267
BseDI CCNNGG 7 cut(s) 108, 192, 405, 406, 949, 1065, 1074
BseGI GGATG 3 cut(s) 231, 320, 672
BseLI CCNNNNNNNGG 2 cut(s) 680, 1046
BseMI GCAATG 3 cut(s) 459, 531, 782
BseMII CTCAG 3 cut(s) 28, 468, 599
BseNI ACTGG 1 cut(s) 1051
BseSI GKGCMC 2 cut(s) 382, 406
BseX3I CGGCCG 2 cut(s) 252, 1062
BseXI GCAGC 4 cut(s) 491, 792, 805, 1023
BseYI CCCAGC 2 cut(s) 796, 856
Bsh1236I CGCG 2 cut(s) 206, 1061
Bsh1285I CGRYCG 2 cut(s) 255, 1065
BshFI GGCC 3 cut(s) 254, 468, 1064
BshNI GGYRCC 2 cut(s) 163, 379
BshVI ATCGAT 1 cut(s) 267
BsiEI CGRYCG 2 cut(s) 255, 1065
BsiHKAI GWGCWC 2 cut(s) 236, 741
BsiHKCI CYCGRG 2 cut(s) 470, 948
BsiSI CCGG 6 cut(s) 161, 194, 237, 324, 414, 990
BslFI GGGAC 4 cut(s) 26, 696, 942, 1038
BslI CCNNNNNNNGG 2 cut(s) 680, 1046
BsmAI GTCTC 3 cut(s) 719, 853, 877
BsmFI GGGAC 4 cut(s) 26, 696, 942, 1038
BsnI GGCC 3 cut(s) 254, 468, 1064
Bso31I GGTCTC 1 cut(s) 877
BsoBI CYCGRG 2 cut(s) 470, 948
Bsp1286I GDGCHC 4 cut(s) 236, 382, 406, 741
Bsp13I TCCGGA 1 cut(s) 323
Bsp1407I TGTACA 1 cut(s) 744
Bsp143I GATC 2 cut(s) 498, 627
BspACI CCGC 6 cut(s) 104, 128, 206, 213, 674, 1061
BspANI GGCC 3 cut(s) 254, 468, 1064
BspCNI CTCAG 3 cut(s) 27, 467, 598
BspDI ATCGAT 1 cut(s) 267
BspEI TCCGGA 1 cut(s) 323
BspFNI CGCG 2 cut(s) 206, 1061
BspLI GGNNCC 9 cut(s) 159, 165, 381, 412, 469, 672, 693, 982, 1054
BspMI ACCTGC 1 cut(s) 500
BspT107I GGYRCC 2 cut(s) 163, 379
BspTNI GGTCTC 1 cut(s) 877
BsrDI GCAATG 3 cut(s) 459, 531, 782
BsrFI RCCGGY 1 cut(s) 413
BsrGI TGTACA 1 cut(s) 744
BsrI ACTGG 1 cut(s) 1051
BssAI RCCGGY 1 cut(s) 413
BssECI CCNNGG 7 cut(s) 108, 192, 405, 406, 949, 1065, 1074
BssMI GATC 2 cut(s) 498, 627
BssNI GRCGYC 2 cut(s) 164, 685
BssT1I CCWWGG 1 cut(s) 1074
Bst2UI CCWGG 3 cut(s) 407, 591, 689
Bst4CI ACNGT 2 cut(s) 401, 904
Bst6I CTCTTC 1 cut(s) 64
BstACI GRCGYC 2 cut(s) 164, 685
BstAPI GCANNNNNTGC 1 cut(s) 515
BstAUI TGTACA 1 cut(s) 744
BstC8I GCNNGC 3 cut(s) 211, 415, 466
BstDEI CTNAG 3 cut(s) 14, 454, 585
BstF5I GGATG 3 cut(s) 231, 320, 672
BstFNI CGCG 2 cut(s) 206, 1061
BstH2I RGCGCY 1 cut(s) 167
BstHHI GCGC 2 cut(s) 166, 647
BstKTI GATC 2 cut(s) 501, 630
BstMAI GTCTC 3 cut(s) 719, 853, 877
BstMBI GATC 2 cut(s) 498, 627
BstMCI CGRYCG 2 cut(s) 255, 1065
BstMWI GCNNNNNNNGC 8 cut(s) 203, 346, 410, 515, 542, 896, 961, 1070
BstNI CCWGG 3 cut(s) 407, 591, 689
BstNSI RCATGY 1 cut(s) 755
BstSCI CCNGG 4 cut(s) 192, 405, 589, 687
BstSLI GKGCMC 2 cut(s) 382, 406
BstUI CGCG 2 cut(s) 206, 1061
BstV1I GCAGC 4 cut(s) 491, 792, 805, 1023
BstXI CCANNNNNNTGG 1 cut(s) 607
BstZI CGGCCG 2 cut(s) 252, 1062
Bsu15I ATCGAT 1 cut(s) 267
BsuRI GGCC 3 cut(s) 254, 468, 1064
BsuTUI ATCGAT 1 cut(s) 267
BtgZI GCGATG 2 cut(s) 11, 84
BtsCI GGATG 3 cut(s) 231, 320, 672
BtsIMutI CAGTG 1 cut(s) 406
BveI ACCTGC 1 cut(s) 500
Cac8I GCNNGC 3 cut(s) 211, 415, 466
CaiI CAGNNNCTG 1 cut(s) 515
CfoI GCGC 2 cut(s) 166, 647
Cfr10I RCCGGY 1 cut(s) 413
Cfr13I GGNCC 2 cut(s) 467, 1052
ClaI ATCGAT 1 cut(s) 267
CseI GACGC 1 cut(s) 693
Csp6I GTAC 8 cut(s) 55, 90, 187, 307, 448, 475, 487, 745
CviAII CATG 3 cut(s) 742, 752, 973
CviQI GTAC 8 cut(s) 55, 90, 187, 307, 448, 475, 487, 745
DdeI CTNAG 3 cut(s) 14, 454, 585
DinI GGCGCC 1 cut(s) 165
DpnI GATC 2 cut(s) 500, 629
DpnII GATC 2 cut(s) 498, 627
DrdI GACNNNNNNGTC 2 cut(s) 869, 936
DseDI GACNNNNNNGTC 2 cut(s) 869, 936
EaeI YGGCCR 2 cut(s) 252, 1062
EagI CGGCCG 2 cut(s) 252, 1062
Eam1104I CTCTTC 1 cut(s) 64
EarI CTCTTC 1 cut(s) 64
Ecl136II GAGCTC 1 cut(s) 739
EclXI CGGCCG 2 cut(s) 252, 1062
Eco130I CCWWGG 1 cut(s) 1074
Eco24I GRGCYC 1 cut(s) 741
Eco31I GGTCTC 1 cut(s) 877
Eco47I GGWCC 1 cut(s) 1052
Eco52I CGGCCG 2 cut(s) 252, 1062
Eco53kI GAGCTC 1 cut(s) 739
Eco57I CTGAAG 1 cut(s) 546
Eco88I CYCGRG 2 cut(s) 470, 948
EcoICRI GAGCTC 1 cut(s) 739
EcoRII CCWGG 3 cut(s) 405, 589, 687
EcoT14I CCWWGG 1 cut(s) 1074
EcoT22I ATGCAT 1 cut(s) 100
EcoT38I GRGCYC 1 cut(s) 741
EgeI GGCGCC 1 cut(s) 165
EheI GGCGCC 1 cut(s) 165
ErhI CCWWGG 1 cut(s) 1074
FaeI CATG 3 cut(s) 745, 755, 976
FalI AAGNNNNNCTT 2 cut(s) 633, 665
FaqI GGGAC 4 cut(s) 26, 696, 942, 1038
FatI CATG 3 cut(s) 741, 751, 972
Fnu4HI GCNGC 7 cut(s) 104, 207, 480, 781, 794, 1037, 1062
FokI GGATG 3 cut(s) 238, 307, 679
FriOI GRGCYC 1 cut(s) 741
Fsp4HI GCNGC 7 cut(s) 104, 207, 480, 781, 794, 1037, 1062
FspBI CTAG 1 cut(s) 813
GlaI GCGC 2 cut(s) 165, 646
GluI GCNGC 7 cut(s) 104, 207, 480, 781, 794, 1037, 1062
GsaI CCCAGC 2 cut(s) 800, 860
HaeII RGCGCY 1 cut(s) 167
HaeIII GGCC 3 cut(s) 254, 468, 1064
HapII CCGG 6 cut(s) 161, 194, 237, 324, 414, 990
HgaI GACGC 1 cut(s) 693
HhaI GCGC 2 cut(s) 166, 647
Hin1I GRCGYC 2 cut(s) 164, 685
Hin1II CATG 3 cut(s) 745, 755, 976
Hin6I GCGC 2 cut(s) 164, 645
HinP1I GCGC 2 cut(s) 164, 645
HindIII AAGCTT 1 cut(s) 46
HinfI GANTC 5 cut(s) 8, 240, 327, 426, 922
HpaII CCGG 6 cut(s) 161, 194, 237, 324, 414, 990
HphI GGTGA 2 cut(s) 920, 937
Hpy188I TCNGA 5 cut(s) 332, 425, 457, 640, 980
Hpy188III TCNNGA 3 cut(s) 324, 442, 724
Hpy99I CGWCG 2 cut(s) 127, 1061
HpyAV CCTTC 2 cut(s) 635, 886
HpyCH4III ACNGT 2 cut(s) 401, 904
HpyCH4V TGCA 7 cut(s) 98, 289, 509, 518, 780, 793, 890
HpyF10VI GCNNNNNNNGC 8 cut(s) 203, 346, 410, 515, 542, 896, 961, 1070
HpyF3I CTNAG 3 cut(s) 14, 454, 585
Hsp92I GRCGYC 2 cut(s) 164, 685
Hsp92II CATG 3 cut(s) 745, 755, 976
HspAI GCGC 2 cut(s) 164, 645
KasI GGCGCC 1 cut(s) 163
Kpn2I TCCGGA 1 cut(s) 323
KroI GCCGGC 1 cut(s) 413
KroNI GCCGGC 1 cut(s) 415
Kzo9I GATC 2 cut(s) 498, 627
LmnI GCTCC 3 cut(s) 346, 410, 896
Lsp1109I GCAGC 4 cut(s) 491, 792, 805, 1023
LweI GCATC 7 cut(s) 85, 107, 324, 527, 725, 901, 1003
MaeI CTAG 1 cut(s) 813
MaeIII GTNAC 2 cut(s) 256, 395
MalI GATC 2 cut(s) 500, 629
MboI GATC 2 cut(s) 498, 627
MboII GAAGA 9 cut(s) 51, 54, 57, 60, 63, 66, 358, 430, 931
MhlI GDGCHC 4 cut(s) 236, 382, 406, 741
MluCI AATT 1 cut(s) 710
Mly113I GGCGCC 1 cut(s) 164
MmeI TCCRAC 2 cut(s) 159, 958
Mph1103I ATGCAT 1 cut(s) 100
MroI TCCGGA 1 cut(s) 323
MroNI GCCGGC 1 cut(s) 413
MspA1I CMGCKG 3 cut(s) 524, 796, 860
MspI CCGG 6 cut(s) 161, 194, 237, 324, 414, 990
MspR9I CCNGG 4 cut(s) 194, 407, 591, 689
MvaI CCWGG 3 cut(s) 407, 591, 689
MvnI CGCG 2 cut(s) 206, 1061
MwoI GCNNNNNNNGC 8 cut(s) 203, 346, 410, 515, 542, 896, 961, 1070
NaeI GCCGGC 1 cut(s) 415
NarI GGCGCC 1 cut(s) 164
NciI CCSGG 1 cut(s) 194
NdeII GATC 2 cut(s) 498, 627
NgoMIV GCCGGC 1 cut(s) 413
NlaIII CATG 3 cut(s) 745, 755, 976
NlaIV GGNNCC 9 cut(s) 159, 165, 381, 412, 469, 672, 693, 982, 1054
NmuCI GTSAC 1 cut(s) 256
NsiI ATGCAT 1 cut(s) 100
NspI RCATGY 1 cut(s) 755
PasI CCCWGGG 1 cut(s) 406
PcsI WCGNNNNNNNCGW 2 cut(s) 429, 720
PdiI GCCGGC 1 cut(s) 415
PfeI GAWTC 5 cut(s) 8, 240, 327, 426, 922
PkrI GCNGC 7 cut(s) 105, 208, 481, 782, 795, 1038, 1063
PluTI GGCGCC 1 cut(s) 167
Psp124BI GAGCTC 1 cut(s) 741
Psp6I CCWGG 3 cut(s) 405, 589, 687
PspFI CCCAGC 2 cut(s) 796, 856
PspGI CCWGG 3 cut(s) 405, 589, 687
PspN4I GGNNCC 9 cut(s) 159, 165, 381, 412, 469, 672, 693, 982, 1054
PspPI GGNCC 2 cut(s) 467, 1052
PstNI CAGNNNCTG 1 cut(s) 515
PvuII CAGCTG 3 cut(s) 524, 796, 860
RsaI GTAC 8 cut(s) 56, 91, 188, 308, 449, 476, 488, 746
RsaNI GTAC 8 cut(s) 55, 90, 187, 307, 448, 475, 487, 745
SacI GAGCTC 1 cut(s) 741
SatI GCNGC 7 cut(s) 104, 207, 480, 781, 794, 1037, 1062
Sau3AI GATC 2 cut(s) 498, 627
Sau96I GGNCC 2 cut(s) 467, 1052
ScaI AGTACT 2 cut(s) 91, 449
ScrFI CCNGG 4 cut(s) 194, 407, 591, 689
SduI GDGCHC 4 cut(s) 236, 382, 406, 741
SfaNI GCATC 7 cut(s) 85, 107, 324, 527, 725, 901, 1003
SfoI GGCGCC 1 cut(s) 165
SinI GGWCC 1 cut(s) 1052
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
Sse9I AATT 1 cut(s) 710
SsiI CCGC 6 cut(s) 104, 128, 206, 213, 674, 1061
SspDI GGCGCC 1 cut(s) 163
SspMI CTAG 1 cut(s) 813
SstI GAGCTC 1 cut(s) 741
StyD4I CCNGG 4 cut(s) 192, 405, 589, 687
StyI CCWWGG 1 cut(s) 1074
TaaI ACNGT 2 cut(s) 401, 904
TaqI TCGA 4 cut(s) 143, 267, 723, 735
TasI AATT 1 cut(s) 710
TatI WGTACW 7 cut(s) 54, 89, 186, 306, 447, 486, 744
TauI GCSGC 3 cut(s) 106, 209, 1064
TfiI GAWTC 5 cut(s) 8, 240, 327, 426, 922
TscAI CASTG 1 cut(s) 406
TseFI GTSAC 1 cut(s) 256
TseI GCWGC 4 cut(s) 479, 780, 793, 1036
Tsp45I GTSAC 1 cut(s) 256
TspDTI ATGAA 2 cut(s) 105, 722
TspRI CASTG 1 cut(s) 406
VpaK11BI GGWCC 1 cut(s) 1052
XapI RAATTY 1 cut(s) 710
XceI RCATGY 1 cut(s) 755
XcmI CCANNNNNNNNNTGG 1 cut(s) 587
XspI CTAG 1 cut(s) 813
ZrmI AGTACT 2 cut(s) 91, 449
Zsp2I ATGCAT 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.