Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003118

Physical Location & Seq

Genomic Coordinates Reverse (-)

61078655 .. 61080476

Gene Structure 1822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004644

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1104 bp

ATGGCAGATAGTTTCACCAGTTCTCGCCAATCTCTCGTTCCGAGCTTCCTCTACTCTTCTTCTTCAATTTCTTCGAAAAGATCGATTGATTTGGATGCAGTGACACATAGAAGTGGTACCCATGCATCGTCACCGTTTATTTCATCATCTACGTCGCCAAAGAGGGTGGTGATTCCGTCGCCTAATGAGAAAATCGAGATGTACTCGCCGGCATTCTATGCCGCGTGTACAGTCGCAGGGATGTTGGCCACCGGACCCACCCACACGGCTGTCACTCCTATTGATCTGGTCAAGTGTAACATGCAGATTGACCCGGCAAAATACAAAAGCGTCATCTCTGGATTTGGAGTTATGTTCAGGGAGCAAGGAATTAGAGGTTTCTTTAGGGGTTGGGCGCCCACTTTGATTGGTTACAGTGCTCAGGGTGCCGCCAAGTACGGCCTCTACGAGTTCTTTAAGAAGTACTATGCAGATATTGCAGGGCCCGAGTATGCAGCCAAGTACAAAACCTTGATCTATCTCGCAGGTTCTGCATCTGCTGAAGTGTTTGCTGATGTTGCCCTCTGTCCTATGGAAGCTGTCAAAGTTCGAGTCCAGACTCAGCCGGGGTTCGCCAGGGGTTTGTCAGATGGGCTACCAAAGTTTATCAAATCCGAAGGCGCTCTCGGGTTGTACAAAGGGATTGTTCCTCTTTGGGGTCGCCAAATTCCTTATACAATGATGAAATTTGCAACTTTCGAGAAATTTGTCGAGCTCACTTACAAGCATGTGATCCCAACACCGAAAGAGCAGTGCAGCACACCCTTGCAGCTCGGAGTGAGCTTTGCGTGTGGATATGTGGCTGGTGTGTTCTGTGCTGTTGTTTCACACCCTGCTGATAACTTGGTGTCTTTCCTCAACAATGCCAAGGGGGCAACTGTTAGTGATGCTGTGAAGAACCTAGGAGTGTGGGGTCTTTTTACCCGGGGTCTTCCTCTTCGTATAGTCATGATCGGAACCCTTACTGGAAGCCAATGGGGTATCTATGATGCCTGCAAAGTTTTCATGGGCGTACCAACTACTGGCGGCCCCGCTCCTGCTGCCACTGAGCTTGCTAATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006839 GO:0006950 GO:0006970 GO:0008150 GO:0008509 GO:0009628 GO:0009651 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0035435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0098656 GO:0098660 GO:0098661

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

368

Amino Acids

39.35

Weight (kDa)

9.22

Isoelectric Point (pI)

40.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	73 - 157	6.2e-22	Mitochondrial carrier protein
Mito_carr	PF00153	169 - 255	4.5e-18	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48850
fragaria_vesca	FvH4_5g09180
malus_domestica	MD06G1133000.v1.1 MD14G1149100.v1.1 MD14G1149200.v1.1
prunus_persica	Prupe.5G143800_v2.0.a1 Prupe.5G143800_v2.0.a1 Prupe.5G144200_v2.0.a1
pyrus_communis	pycom06g12440 pycom14g12400
rosa_chinensis	RchiOBHm_Chr3g0469101 RchiOBHm_Chr7g0189001
rosa_laevigata	RLG00000004644 RLG00000024373 RLG00000024376 RLG00000024384 RLG00000024387
rosa_multiflora	Rmu_sc0000302.1_g000019 Rmu_sc0000302.1_g000040 Rmu_sc0007139.1_g000006 Rmu_sc0007933.1_g000010 Rmu_sc0008582.1_g000005
rosa_roxburghii	Rroxscaffold_3G00265880 Rroxscaffold_6G00412220
rosa_rugosa	Rorug03G0099100 Rorug03G0099100 Rorug03G0099500 Rorug03G0099600 Rorug06G0495300
rosa_samantha	Rh3DG203500 Rh7AG100000 Rh7BG102200 Rh7CG103500 Rh7DG102000
rosa_wichuraiana	Rw3G014010 Rw3G014030 Rw7G008630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	515
Acc65I	GGTACC	1 cut(s)	116
AccB1I	GGYRCC	3 cut(s)	116, 394, 425
AccB7I	CCANNNNNTGG	1 cut(s)	1061
AccBSI	CCGCTC	1 cut(s)	1073
AccII	CGCG	1 cut(s)	224
AciI	CCGC	4 cut(s)	222, 429, 1065, 1071
AclWI	GGATC	1 cut(s)	766
AcoI	YGGCCR	1 cut(s)	246
AcsI	RAATTY	3 cut(s)	705, 725, 743
AcuI	CTGAAG	1 cut(s)	561
AcyI	GRCGYC	1 cut(s)	395
AfaI	GTAC	8 cut(s)	118, 203, 229, 437, 464, 503, 674, 1053
AfiI	CCNNNNNNNGG	2 cut(s)	695, 1061
AgsI	TTSAA	1 cut(s)	66
AjnI	CCWGG	1 cut(s)	614
AjuI	GAANNNNNNNTTGG	2 cut(s)	21, 53
AluBI	AGCT	6 cut(s)	45, 578, 754, 811, 822, 1090
AluI	AGCT	6 cut(s)	45, 578, 754, 811, 822, 1090
Alw21I	GWGCWC	2 cut(s)	421, 756
AlwI	GGATC	1 cut(s)	766
AlwNI	CAGNNNCTG	1 cut(s)	530
Ama87I	CYCGRG	3 cut(s)	485, 665, 963
AoxI	GGCC	4 cut(s)	246, 439, 482, 1066
ApaI	GGGCCC	1 cut(s)	486
ApeKI	GCWGC	4 cut(s)	494, 795, 808, 1079
ApoI	RAATTY	3 cut(s)	705, 725, 743
ArsI	GACNNNNNNTTYG	2 cut(s)	576, 608
Asp718I	GGTACC	1 cut(s)	116
AspA2I	CCTAGG	1 cut(s)	940
AspLEI	GCGC	2 cut(s)	397, 662
AspS9I	GGNCC	4 cut(s)	254, 482, 483, 1067
AsuC2I	CCSGG	4 cut(s)	314, 606, 964, 965
AsuHPI	GGTGA	3 cut(s)	7, 123, 181
AsuII	TTCGAA	1 cut(s)	74
AvaI	CYCGRG	3 cut(s)	485, 665, 963
AvaII	GGWCC	1 cut(s)	254
AvrII	CCTAGG	1 cut(s)	940
BaeGI	GKGCMC	1 cut(s)	486
BalI	TGGCCA	1 cut(s)	248
BanI	GGYRCC	3 cut(s)	116, 394, 425
BanII	GRGCYC	2 cut(s)	486, 756
BbsI	GAAGAC	1 cut(s)	962
Bbv12I	GWGCWC	2 cut(s)	421, 756
BbvI	GCAGC	4 cut(s)	506, 807, 820, 1066
BccI	CCATC	1 cut(s)	623
BceAI	ACGGC	2 cut(s)	282, 454
BciT130I	CCWGG	1 cut(s)	616
BcnI	CCSGG	4 cut(s)	314, 606, 964, 965
BfaI	CTAG	1 cut(s)	941
BfoI	RGCGCY	2 cut(s)	398, 663
BfuAI	ACCTGC	1 cut(s)	515
BglI	GCCNNNNNGGC	1 cut(s)	911
BisI	GCNGC	7 cut(s)	222, 429, 495, 796, 809, 1066, 1080
BlnI	CCTAGG	1 cut(s)	940
BlsI	GCNGC	7 cut(s)	223, 430, 496, 797, 810, 1067, 1081
BmcAI	AGTACT	1 cut(s)	464
Bme1390I	CCNGG	5 cut(s)	314, 606, 616, 964, 965
Bme18I	GGWCC	1 cut(s)	254
BmeT110I	CYCGRG	3 cut(s)	485, 665, 963
BmgT120I	GGNCC	4 cut(s)	254, 482, 483, 1067
BmiI	GGNNCC	7 cut(s)	118, 256, 396, 427, 484, 997, 1069
BmrFI	CCNGG	5 cut(s)	314, 606, 616, 964, 965
BmsI	GCATC	5 cut(s)	85, 134, 542, 916, 1018
BpiI	GAAGAC	1 cut(s)	962
BplI	GAGNNNNNCTC	2 cut(s)	188, 220
Bpu10I	CCTNAGC	1 cut(s)	420
Bpu14I	TTCGAA	1 cut(s)	74
BpuMI	CCSGG	4 cut(s)	314, 606, 964, 965
Bsa29I	ATCGAT	1 cut(s)	83
BsaHI	GRCGYC	1 cut(s)	395
BsaJI	CCNNGG	6 cut(s)	605, 615, 906, 940, 963, 964
BsaWI	WCCGGW	1 cut(s)	251
Bsc4I	CCNNNNNNNGG	2 cut(s)	695, 1061
Bse118I	RCCGGY	1 cut(s)	208
Bse1I	ACTGG	3 cut(s)	18, 1009, 1066
BseBI	CCWGG	1 cut(s)	616
BseCI	ATCGAT	1 cut(s)	83
BseDI	CCNNGG	6 cut(s)	605, 615, 906, 940, 963, 964
BseGI	GGATG	2 cut(s)	100, 246
BseLI	CCNNNNNNNGG	2 cut(s)	695, 1061
BseMII	CTCAG	3 cut(s)	434, 614, 1077
BseNI	ACTGG	3 cut(s)	18, 1009, 1066
BseSI	GKGCMC	1 cut(s)	486
BseXI	GCAGC	4 cut(s)	506, 807, 820, 1066
BsgI	GTGCAG	1 cut(s)	814
Bsh1236I	CGCG	1 cut(s)	224
BshFI	GGCC	4 cut(s)	248, 441, 484, 1068
BshNI	GGYRCC	3 cut(s)	116, 394, 425
BshVI	ATCGAT	1 cut(s)	83
BsiHKAI	GWGCWC	2 cut(s)	421, 756
BsiHKCI	CYCGRG	3 cut(s)	485, 665, 963
BsiSI	CCGG	5 cut(s)	209, 252, 314, 605, 964
BslI	CCNNNNNNNGG	2 cut(s)	695, 1061
BsmI	GAATGC	1 cut(s)	212
BsnI	GGCC	4 cut(s)	248, 441, 484, 1068
BsoBI	CYCGRG	3 cut(s)	485, 665, 963
Bsp119I	TTCGAA	1 cut(s)	74
Bsp120I	GGGCCC	1 cut(s)	482
Bsp1286I	GDGCHC	3 cut(s)	421, 486, 756
Bsp1407I	TGTACA	2 cut(s)	227, 672
Bsp143I	GATC	5 cut(s)	80, 283, 513, 771, 990
BspACI	CCGC	4 cut(s)	222, 429, 1065, 1071
BspANI	GGCC	4 cut(s)	248, 441, 484, 1068
BspCNI	CTCAG	3 cut(s)	433, 613, 1078
BspDI	ATCGAT	1 cut(s)	83
BspFNI	CGCG	1 cut(s)	224
BspHI	TCATGA	1 cut(s)	987
BspLI	GGNNCC	7 cut(s)	118, 256, 396, 427, 484, 997, 1069
BspMI	ACCTGC	1 cut(s)	515
BspPI	GGATC	1 cut(s)	766
BspT104I	TTCGAA	1 cut(s)	74
BspT107I	GGYRCC	3 cut(s)	116, 394, 425
BsrBI	CCGCTC	1 cut(s)	1073
BsrFI	RCCGGY	1 cut(s)	208
BsrGI	TGTACA	2 cut(s)	227, 672
BsrI	ACTGG	3 cut(s)	18, 1009, 1066
BssAI	RCCGGY	1 cut(s)	208
BssECI	CCNNGG	6 cut(s)	605, 615, 906, 940, 963, 964
BssMI	GATC	5 cut(s)	80, 283, 513, 771, 990
BssNI	GRCGYC	1 cut(s)	395
BssT1I	CCWWGG	2 cut(s)	906, 940
Bst2UI	CCWGG	1 cut(s)	616
Bst4CI	ACNGT	4 cut(s)	135, 232, 416, 919
Bst6I	CTCTTC	2 cut(s)	61, 981
BstACI	GRCGYC	1 cut(s)	395
BstAPI	GCANNNNNTGC	3 cut(s)	218, 476, 530
BstAUI	TGTACA	2 cut(s)	227, 672
BstBI	TTCGAA	1 cut(s)	74
BstC8I	GCNNGC	3 cut(s)	210, 1033, 1092
BstDEI	CTNAG	3 cut(s)	420, 600, 1086
BstF5I	GGATG	2 cut(s)	100, 246
BstFNI	CGCG	1 cut(s)	224
BstH2I	RGCGCY	2 cut(s)	398, 663
BstHHI	GCGC	2 cut(s)	397, 662
BstKTI	GATC	5 cut(s)	83, 286, 516, 774, 993
BstMBI	GATC	5 cut(s)	80, 283, 513, 771, 990
BstMWI	GCNNNNNNNGC	7 cut(s)	218, 425, 476, 530, 557, 911, 1079
BstNI	CCWGG	1 cut(s)	616
BstNSI	RCATGY	2 cut(s)	304, 770
BstSCI	CCNGG	5 cut(s)	312, 604, 614, 962, 963
BstSLI	GKGCMC	1 cut(s)	486
BstUI	CGCG	1 cut(s)	224
BstV1I	GCAGC	4 cut(s)	506, 807, 820, 1066
BstV2I	GAAGAC	1 cut(s)	962
Bsu15I	ATCGAT	1 cut(s)	83
BsuRI	GGCC	4 cut(s)	248, 441, 484, 1068
BsuTUI	ATCGAT	1 cut(s)	83
BtsCI	GGATG	2 cut(s)	100, 246
BtsI	GCAGTG	2 cut(s)	105, 797
BtsIMutI	CAGTG	4 cut(s)	105, 421, 797, 1083
BveI	ACCTGC	1 cut(s)	515
Cac8I	GCNNGC	3 cut(s)	210, 1033, 1092
CaiI	CAGNNNCTG	1 cut(s)	530
CciI	TCATGA	1 cut(s)	987
CfoI	GCGC	2 cut(s)	397, 662
Cfr10I	RCCGGY	1 cut(s)	208
Cfr13I	GGNCC	4 cut(s)	254, 482, 483, 1067
Cfr9I	CCCGGG	1 cut(s)	963
ClaI	ATCGAT	1 cut(s)	83
CseI	GACGC	1 cut(s)	319
Csp6I	GTAC	8 cut(s)	117, 202, 228, 436, 463, 502, 673, 1052
CspCI	CAANNNNNGTGG	5 cut(s)	147, 182, 388, 423, 1072
CviAII	CATG	5 cut(s)	122, 301, 767, 988, 1045
CviQI	GTAC	8 cut(s)	117, 202, 228, 436, 463, 502, 673, 1052
DdeI	CTNAG	3 cut(s)	420, 600, 1086
DinI	GGCGCC	1 cut(s)	396
DpnI	GATC	5 cut(s)	82, 285, 515, 773, 992
DpnII	GATC	5 cut(s)	80, 283, 513, 771, 990
EaeI	YGGCCR	1 cut(s)	246
Eam1104I	CTCTTC	2 cut(s)	61, 981
EarI	CTCTTC	2 cut(s)	61, 981
Ecl136II	GAGCTC	1 cut(s)	754
Eco130I	CCWWGG	2 cut(s)	906, 940
Eco24I	GRGCYC	2 cut(s)	486, 756
Eco47I	GGWCC	1 cut(s)	254
Eco53kI	GAGCTC	1 cut(s)	754
Eco57I	CTGAAG	1 cut(s)	561
Eco88I	CYCGRG	3 cut(s)	485, 665, 963
EcoICRI	GAGCTC	1 cut(s)	754
EcoO109I	RGGNCCY	1 cut(s)	482
EcoRII	CCWGG	1 cut(s)	614
EcoT14I	CCWWGG	2 cut(s)	906, 940
EcoT22I	ATGCAT	1 cut(s)	127
EcoT38I	GRGCYC	2 cut(s)	486, 756
EgeI	GGCGCC	1 cut(s)	396
EheI	GGCGCC	1 cut(s)	396
ErhI	CCWWGG	2 cut(s)	906, 940
FaeI	CATG	5 cut(s)	125, 304, 770, 991, 1048
FatI	CATG	5 cut(s)	121, 300, 766, 987, 1044
FauI	CCCGC	1 cut(s)	1078
Fnu4HI	GCNGC	7 cut(s)	222, 429, 495, 796, 809, 1066, 1080
FokI	GGATG	2 cut(s)	107, 253
FriOI	GRGCYC	2 cut(s)	486, 756
Fsp4HI	GCNGC	7 cut(s)	222, 429, 495, 796, 809, 1066, 1080
FspBI	CTAG	1 cut(s)	941
GlaI	GCGC	2 cut(s)	396, 661
GluI	GCNGC	7 cut(s)	222, 429, 495, 796, 809, 1066, 1080
HaeII	RGCGCY	2 cut(s)	398, 663
HaeIII	GGCC	4 cut(s)	248, 441, 484, 1068
HapII	CCGG	5 cut(s)	209, 252, 314, 605, 964
HgaI	GACGC	1 cut(s)	319
HhaI	GCGC	2 cut(s)	397, 662
Hin1I	GRCGYC	1 cut(s)	395
Hin1II	CATG	5 cut(s)	125, 304, 770, 991, 1048
Hin6I	GCGC	2 cut(s)	395, 660
HinP1I	GCGC	2 cut(s)	395, 660
HinfI	GANTC	3 cut(s)	172, 591, 598
HpaII	CCGG	5 cut(s)	209, 252, 314, 605, 964
HphI	GGTGA	3 cut(s)	7, 123, 181
Hpy166II	GTNNAC	1 cut(s)	228
Hpy188I	TCNGA	5 cut(s)	42, 628, 655, 815, 995
Hpy188III	TCNNGA	5 cut(s)	196, 339, 595, 739, 988
Hpy8I	GTNNAC	1 cut(s)	228
Hpy99I	CGWCG	2 cut(s)	157, 181
HpyAV	CCTTC	1 cut(s)	650
HpyCH4III	ACNGT	4 cut(s)	135, 232, 416, 919
HpyCH4IV	ACGT	1 cut(s)	152
HpyF10VI	GCNNNNNNNGC	7 cut(s)	218, 425, 476, 530, 557, 911, 1079
HpyF3I	CTNAG	3 cut(s)	420, 600, 1086
HpySE526I	ACGT	1 cut(s)	152
Hsp92I	GRCGYC	1 cut(s)	395
Hsp92II	CATG	5 cut(s)	125, 304, 770, 991, 1048
HspAI	GCGC	2 cut(s)	395, 660
KasI	GGCGCC	1 cut(s)	394
KpnI	GGTACC	1 cut(s)	120
KroI	GCCGGC	1 cut(s)	208
KroNI	GCCGGC	1 cut(s)	210
Kzo9I	GATC	5 cut(s)	80, 283, 513, 771, 990
LmnI	GCTCC	2 cut(s)	361, 1078
Lsp1109I	GCAGC	4 cut(s)	506, 807, 820, 1066
LweI	GCATC	5 cut(s)	85, 134, 542, 916, 1018
MaeI	CTAG	1 cut(s)	941
MaeII	ACGT	1 cut(s)	152
MaeIII	GTNAC	5 cut(s)	100, 129, 271, 296, 410
MalI	GATC	5 cut(s)	82, 285, 515, 773, 992
MbiI	CCGCTC	1 cut(s)	1073
MboI	GATC	5 cut(s)	80, 283, 513, 771, 990
MboII	GAAGA	7 cut(s)	48, 51, 54, 63, 946, 962, 968
MhlI	GDGCHC	3 cut(s)	421, 486, 756
MlsI	TGGCCA	1 cut(s)	248
MluCI	AATT	5 cut(s)	66, 369, 705, 725, 743
MluNI	TGGCCA	1 cut(s)	248
Mly113I	GGCGCC	1 cut(s)	395
MlyI	GAGTC	2 cut(s)	592, 600
MnlI	CCTC	8 cut(s)	59, 156, 368, 452, 572, 699, 905, 984
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	1 cut(s)	127
MroNI	GCCGGC	1 cut(s)	208
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	1 cut(s)	456
MslI	CAYNNNNRTG	1 cut(s)	111
Msp20I	TGGCCA	1 cut(s)	248
MspI	CCGG	5 cut(s)	209, 252, 314, 605, 964
MspR9I	CCNGG	5 cut(s)	314, 606, 616, 964, 965
Mva1269I	GAATGC	1 cut(s)	212
MvaI	CCWGG	1 cut(s)	616
MvnI	CGCG	1 cut(s)	224
MwoI	GCNNNNNNNGC	7 cut(s)	218, 425, 476, 530, 557, 911, 1079
NaeI	GCCGGC	1 cut(s)	210
NarI	GGCGCC	1 cut(s)	395
NciI	CCSGG	4 cut(s)	314, 606, 964, 965
NdeII	GATC	5 cut(s)	80, 283, 513, 771, 990
NgoMIV	GCCGGC	1 cut(s)	208
NlaIII	CATG	5 cut(s)	125, 304, 770, 991, 1048
NlaIV	GGNNCC	7 cut(s)	118, 256, 396, 427, 484, 997, 1069
NmuCI	GTSAC	3 cut(s)	100, 129, 271
NsiI	ATGCAT	1 cut(s)	127
NspI	RCATGY	2 cut(s)	304, 770
NspV	TTCGAA	1 cut(s)	74
PagI	TCATGA	1 cut(s)	987
PcsI	WCGNNNNNNNCGW	2 cut(s)	80, 444
PctI	GAATGC	1 cut(s)	212
PdiI	GCCGGC	1 cut(s)	210
PfeI	GAWTC	1 cut(s)	172
PflMI	CCANNNNNTGG	1 cut(s)	1061
PkrI	GCNGC	7 cut(s)	223, 430, 496, 797, 810, 1067, 1081
PleI	GAGTC	2 cut(s)	592, 599
PluTI	GGCGCC	1 cut(s)	398
PpsI	GAGTC	2 cut(s)	592, 599
Psp124BI	GAGCTC	1 cut(s)	756
Psp6I	CCWGG	1 cut(s)	614
PspGI	CCWGG	1 cut(s)	614
PspN4I	GGNNCC	7 cut(s)	118, 256, 396, 427, 484, 997, 1069
PspOMI	GGGCCC	1 cut(s)	482
PspPI	GGNCC	4 cut(s)	254, 482, 483, 1067
PstNI	CAGNNNCTG	1 cut(s)	530
RsaI	GTAC	8 cut(s)	118, 203, 229, 437, 464, 503, 674, 1053
RsaNI	GTAC	8 cut(s)	117, 202, 228, 436, 463, 502, 673, 1052
RseI	CAYNNNNRTG	1 cut(s)	111
SacI	GAGCTC	1 cut(s)	756
SaqAI	TTAA	1 cut(s)	456
SatI	GCNGC	7 cut(s)	222, 429, 495, 796, 809, 1066, 1080
Sau3AI	GATC	5 cut(s)	80, 283, 513, 771, 990
Sau96I	GGNCC	4 cut(s)	254, 482, 483, 1067
ScaI	AGTACT	1 cut(s)	464
SchI	GAGTC	2 cut(s)	592, 600
ScrFI	CCNGG	5 cut(s)	314, 606, 616, 964, 965
SduI	GDGCHC	3 cut(s)	421, 486, 756
SfaNI	GCATC	5 cut(s)	85, 134, 542, 916, 1018
SfoI	GGCGCC	1 cut(s)	396
SfuI	TTCGAA	1 cut(s)	74
SinI	GGWCC	1 cut(s)	254
SmaI	CCCGGG	1 cut(s)	965
SmiMI	CAYNNNNRTG	1 cut(s)	111
Sse9I	AATT	5 cut(s)	66, 369, 705, 725, 743
SsiI	CCGC	4 cut(s)	222, 429, 1065, 1071
SspDI	GGCGCC	1 cut(s)	394
SspMI	CTAG	1 cut(s)	941
SstI	GAGCTC	1 cut(s)	756
StyD4I	CCNGG	5 cut(s)	312, 604, 614, 962, 963
StyI	CCWWGG	2 cut(s)	906, 940
TaaI	ACNGT	4 cut(s)	135, 232, 416, 919
TaiI	ACGT	1 cut(s)	155
TaqI	TCGA	6 cut(s)	74, 83, 195, 589, 738, 750
TasI	AATT	5 cut(s)	66, 369, 705, 725, 743
TatI	WGTACW	5 cut(s)	201, 227, 462, 501, 672
TauI	GCSGC	3 cut(s)	224, 431, 1068
TfiI	GAWTC	1 cut(s)	172
Tru1I	TTAA	1 cut(s)	456
Tru9I	TTAA	1 cut(s)	456
TscAI	CASTG	4 cut(s)	105, 421, 797, 1090
TseFI	GTSAC	3 cut(s)	100, 129, 271
TseI	GCWGC	4 cut(s)	494, 795, 808, 1079
Tsp45I	GTSAC	3 cut(s)	100, 129, 271
TspDTI	ATGAA	3 cut(s)	132, 737, 1033
TspGWI	ACGGA	1 cut(s)	165
TspMI	CCCGGG	1 cut(s)	963
TspRI	CASTG	4 cut(s)	105, 421, 797, 1090
Van91I	CCANNNNNTGG	1 cut(s)	1061
VpaK11BI	GGWCC	1 cut(s)	254
XapI	RAATTY	3 cut(s)	705, 725, 743
XceI	RCATGY	2 cut(s)	304, 770
XmaI	CCCGGG	1 cut(s)	963
XmaJI	CCTAGG	1 cut(s)	940
XspI	CTAG	1 cut(s)	941
ZrmI	AGTACT	1 cut(s)	464
Zsp2I	ATGCAT	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.