MD14G1149200.v1.1

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
24214058 .. 24217067
3010 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1149200.v1.1.491

Sequence Viewer

Length: 1083 bp
ATGGCAGATTCTCTCAGCAACGCTCATCGCCACTCTCTCGTCCCAAGCTTCTTGTACTCTTCTTCTTCTTCTTCAATGCGGACGAGAACTGATGCATCGCCACCCTCGGTTTCATCATCGTCGGCAGTGGCCTTGTTGTCGAAAAGGGTGGTGGTTCCAGCGCCTAAAGAGAAGTTGGAGATGTACTCGCCGGCGTTCTACGCGGCGTGCGGAGTAGCAGGGATGTTGAGCACCGGATCCACTCACACGGCTGTCACGCCTATCGATGTCATCAAGTGTAATATGCAGATTGACCCAATCAAGTACAAGAGCATCACATCCGGATTCAAAGTTATGCTCAAGGAGCAGGGCATAAGAGGTTTCTTCAAAGGTTGGGCACCAACTTTTGTTGGTTACAGTGCTCAGGGAGCCGGCAAGTTCGGATTCTACGAGTTCTTCAAGAAGTACTACTCAGACATTGCTGGCCCCGAGTATGCAGTCAAGTACAAAACATTGATCTACCTTGCAGGTTCTGCATCAGCTGAAGTCATTGCCGATGTTGCCCTCTGTCCTATGGAAGCCGTCAAAGTTCGTGTCCAAACTCAACCCGGTTTTGCCAGAGGCTTGGCTGATGGCCTTCCCAAGATCATCAAATCCGAAGGCGCTCTCGGGTTGTATAAAGGGATGGTTCCGCTTTGGGGACGTCAGGTTCCTTATACTATGATGAAATTCGCATCTTTCGAGACTACTATCGAGCTCATGTACAAGCATGTAATCTCAACACCCAAAGAGCAATGCAGCACACCCTTGCAGCTTGGTGTGAGCTTTGCTAGTGGGTATATTGCTGGTGTGTTCTGTGCTGTTGTCTCACACCCAGCTGACAACTTGGTCTCCTTCCTCAACAATGCAAGGGGAGCAACCGTTAGCGATGCTGTGAAGAATCTGGGACTATTAGGTCTTTTCACCCGAGGCCTTCCTCTGCGTATCGTCATGGTCGGAACCCTAACCGGAGGTCAATGGGTTCTCTATGATGCTTTCAAAGTTCTTGTAGGGCTGCCGACTACTGGTGGTCCCGCCACCGCCGCCGAGGTTGCCAAGGCTTGA

Protein Analysis

361

Amino Acids

38.39

Weight (kDa)

9.42

Isoelectric Point (pI)

29.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 67 - 152 7.6e-23 Mitochondrial carrier protein
Mito_carr PF00153 163 - 250 3.1e-19 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 866, 933
AatII GACGTC 1 cut(s) 685
Acc36I ACCTGC 1 cut(s) 497
AccB1I GGYRCC 1 cut(s) 376
AccII CGCG 1 cut(s) 203
AccIII TCCGGA 1 cut(s) 320
AciI CCGC 7 cut(s) 79, 203, 210, 671, 1053, 1059, 1062
AclWI GGATC 2 cut(s) 231, 244
AcsI RAATTY 1 cut(s) 707
AcuI CTGAAG 1 cut(s) 543
AcyI GRCGYC 1 cut(s) 682
AfaI GTAC 6 cut(s) 56, 185, 305, 446, 485, 743
AfiI CCNNNNNNNGG 2 cut(s) 677, 1043
AgsI TTSAA 5 cut(s) 75, 328, 367, 439, 1018
AloI GAACNNNNNNTCC 2 cut(s) 672, 704
AluBI AGCT 6 cut(s) 48, 521, 736, 793, 804, 857
AluI AGCT 6 cut(s) 48, 521, 736, 793, 804, 857
Alw21I GWGCWC 3 cut(s) 233, 403, 738
Alw26I GTCTC 3 cut(s) 716, 850, 874
AlwI GGATC 2 cut(s) 231, 244
AlwNI CAGNNNCTG 1 cut(s) 512
Ama87I CYCGRG 3 cut(s) 467, 647, 945
Aor13HI TCCGGA 1 cut(s) 320
AoxI GGCC 4 cut(s) 129, 463, 613, 949
ApeKI GCWGC 3 cut(s) 777, 790, 1033
ApoI RAATTY 1 cut(s) 707
ArsI GACNNNNNNTTYG 2 cut(s) 558, 590
AspLEI GCGC 2 cut(s) 163, 644
AspS9I GGNCC 2 cut(s) 464, 1049
AsuC2I CCSGG 1 cut(s) 588
AsuHPI GGTGA 1 cut(s) 934
AvaI CYCGRG 3 cut(s) 467, 647, 945
AvaII GGWCC 1 cut(s) 1049
BaeGI GKGCMC 1 cut(s) 379
BamHI GGATCC 1 cut(s) 236
BanI GGYRCC 1 cut(s) 376
BanII GRGCYC 1 cut(s) 738
Bbv12I GWGCWC 3 cut(s) 233, 403, 738
BbvI GCAGC 3 cut(s) 789, 802, 1020
BccI CCATC 2 cut(s) 605, 658
BceAI ACGGC 2 cut(s) 264, 545
BcnI CCSGG 1 cut(s) 588
BcoDI GTCTC 3 cut(s) 716, 850, 874
BfaI CTAG 1 cut(s) 810
BfoI RGCGCY 2 cut(s) 164, 645
BfuAI ACCTGC 1 cut(s) 497
BisI GCNGC 5 cut(s) 204, 778, 791, 1034, 1062
BlsI GCNGC 5 cut(s) 205, 779, 792, 1035, 1063
BmcAI AGTACT 1 cut(s) 446
Bme1390I CCNGG 1 cut(s) 588
Bme18I GGWCC 1 cut(s) 1049
BmeT110I CYCGRG 3 cut(s) 467, 647, 945
BmgT120I GGNCC 2 cut(s) 464, 1049
BmiI GGNNCC 9 cut(s) 156, 238, 378, 409, 466, 669, 690, 979, 1051
BmrFI CCNGG 1 cut(s) 588
BmsI GCATC 7 cut(s) 82, 104, 321, 524, 722, 898, 1000
BplI GAGNNNNNCTC 2 cut(s) 170, 202
Bpu10I CCTNAGC 1 cut(s) 402
BpuEI CTTGAG 1 cut(s) 323
BpuMI CCSGG 1 cut(s) 588
Bsa29I ATCGAT 1 cut(s) 264
BsaHI GRCGYC 1 cut(s) 682
BsaI GGTCTC 1 cut(s) 874
BsaJI CCNNGG 4 cut(s) 105, 946, 1065, 1074
BsaWI WCCGGW 3 cut(s) 233, 320, 986
BsaXI ACNNNNNCTCC 4 cut(s) 854, 884, 885, 915
Bsc4I CCNNNNNNNGG 2 cut(s) 677, 1043
Bse118I RCCGGY 2 cut(s) 190, 410
Bse1I ACTGG 1 cut(s) 1048
Bse3DI GCAATG 3 cut(s) 456, 528, 779
BseAI TCCGGA 1 cut(s) 320
BseCI ATCGAT 1 cut(s) 264
BseDI CCNNGG 4 cut(s) 105, 946, 1065, 1074
BseGI GGATG 3 cut(s) 228, 317, 669
BseLI CCNNNNNNNGG 2 cut(s) 677, 1043
BseMI GCAATG 3 cut(s) 456, 528, 779
BseMII CTCAG 3 cut(s) 28, 416, 465
BseNI ACTGG 1 cut(s) 1048
BseSI GKGCMC 1 cut(s) 379
BseXI GCAGC 3 cut(s) 789, 802, 1020
BseYI CCCAGC 1 cut(s) 853
Bsh1236I CGCG 1 cut(s) 203
BshFI GGCC 4 cut(s) 131, 465, 615, 951
BshNI GGYRCC 1 cut(s) 376
BshVI ATCGAT 1 cut(s) 264
BsiHKAI GWGCWC 3 cut(s) 233, 403, 738
BsiHKCI CYCGRG 3 cut(s) 467, 647, 945
BsiSI CCGG 6 cut(s) 191, 234, 321, 411, 588, 987
BslFI GGGAC 4 cut(s) 26, 693, 939, 1035
BslI CCNNNNNNNGG 2 cut(s) 677, 1043
BsmAI GTCTC 3 cut(s) 716, 850, 874
BsmFI GGGAC 4 cut(s) 26, 693, 939, 1035
BsnI GGCC 4 cut(s) 131, 465, 615, 951
Bso31I GGTCTC 1 cut(s) 874
BsoBI CYCGRG 3 cut(s) 467, 647, 945
Bsp1286I GDGCHC 4 cut(s) 233, 379, 403, 738
Bsp13I TCCGGA 1 cut(s) 320
Bsp1407I TGTACA 1 cut(s) 741
Bsp143I GATC 3 cut(s) 236, 495, 624
BspACI CCGC 7 cut(s) 79, 203, 210, 671, 1053, 1059, 1062
BspANI GGCC 4 cut(s) 131, 465, 615, 951
BspCNI CTCAG 3 cut(s) 27, 415, 464
BspDI ATCGAT 1 cut(s) 264
BspEI TCCGGA 1 cut(s) 320
BspFNI CGCG 1 cut(s) 203
BspLI GGNNCC 9 cut(s) 156, 238, 378, 409, 466, 669, 690, 979, 1051
BspMI ACCTGC 1 cut(s) 497
BspPI GGATC 2 cut(s) 231, 244
BspT107I GGYRCC 1 cut(s) 376
BspTNI GGTCTC 1 cut(s) 874
BsrDI GCAATG 3 cut(s) 456, 528, 779
BsrFI RCCGGY 2 cut(s) 190, 410
BsrGI TGTACA 1 cut(s) 741
BsrI ACTGG 1 cut(s) 1048
BssAI RCCGGY 2 cut(s) 190, 410
BssECI CCNNGG 4 cut(s) 105, 946, 1065, 1074
BssMI GATC 3 cut(s) 236, 495, 624
BssNI GRCGYC 1 cut(s) 682
BssT1I CCWWGG 1 cut(s) 1074
Bst4CI ACNGT 2 cut(s) 398, 901
Bst6I CTCTTC 1 cut(s) 64
BstACI GRCGYC 1 cut(s) 682
BstAPI GCANNNNNTGC 1 cut(s) 512
BstAUI TGTACA 1 cut(s) 741
BstC8I GCNNGC 4 cut(s) 192, 208, 412, 463
BstDEI CTNAG 3 cut(s) 14, 402, 451
BstF5I GGATG 3 cut(s) 228, 317, 669
BstFNI CGCG 1 cut(s) 203
BstH2I RGCGCY 2 cut(s) 164, 645
BstHHI GCGC 2 cut(s) 163, 644
BstKTI GATC 3 cut(s) 239, 498, 627
BstMAI GTCTC 3 cut(s) 716, 850, 874
BstMBI GATC 3 cut(s) 236, 495, 624
BstMWI GCNNNNNNNGC 8 cut(s) 200, 343, 407, 512, 539, 893, 1061, 1070
BstNSI RCATGY 1 cut(s) 752
BstSCI CCNGG 1 cut(s) 586
BstSLI GKGCMC 1 cut(s) 379
BstUI CGCG 1 cut(s) 203
BstV1I GCAGC 3 cut(s) 789, 802, 1020
BstX2I RGATCY 1 cut(s) 236
BstXI CCANNNNNNTGG 1 cut(s) 604
BstYI RGATCY 1 cut(s) 236
Bsu15I ATCGAT 1 cut(s) 264
BsuRI GGCC 4 cut(s) 131, 465, 615, 951
BsuTUI ATCGAT 1 cut(s) 264
BtgZI GCGATG 3 cut(s) 11, 81, 921
BtsCI GGATG 3 cut(s) 228, 317, 669
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 2 cut(s) 132, 403
BveI ACCTGC 1 cut(s) 497
Cac8I GCNNGC 4 cut(s) 192, 208, 412, 463
CaiI CAGNNNCTG 1 cut(s) 512
CfoI GCGC 2 cut(s) 163, 644
Cfr10I RCCGGY 2 cut(s) 190, 410
Cfr13I GGNCC 2 cut(s) 464, 1049
ClaI ATCGAT 1 cut(s) 264
Csp6I GTAC 6 cut(s) 55, 184, 304, 445, 484, 742
CviAII CATG 3 cut(s) 739, 749, 970
CviQI GTAC 6 cut(s) 55, 184, 304, 445, 484, 742
DdeI CTNAG 3 cut(s) 14, 402, 451
DpnI GATC 3 cut(s) 238, 497, 626
DpnII GATC 3 cut(s) 236, 495, 624
DrdI GACNNNNNNGTC 2 cut(s) 866, 933
DseDI GACNNNNNNGTC 2 cut(s) 866, 933
Eam1104I CTCTTC 1 cut(s) 64
EarI CTCTTC 1 cut(s) 64
Ecl136II GAGCTC 1 cut(s) 736
Eco130I CCWWGG 1 cut(s) 1074
Eco147I AGGCCT 1 cut(s) 951
Eco24I GRGCYC 1 cut(s) 738
Eco31I GGTCTC 1 cut(s) 874
Eco47I GGWCC 1 cut(s) 1049
Eco53kI GAGCTC 1 cut(s) 736
Eco57I CTGAAG 1 cut(s) 543
Eco88I CYCGRG 3 cut(s) 467, 647, 945
EcoICRI GAGCTC 1 cut(s) 736
EcoT14I CCWWGG 1 cut(s) 1074
EcoT22I ATGCAT 1 cut(s) 97
EcoT38I GRGCYC 1 cut(s) 738
ErhI CCWWGG 1 cut(s) 1074
FaeI CATG 3 cut(s) 742, 752, 973
FaqI GGGAC 4 cut(s) 26, 693, 939, 1035
FatI CATG 3 cut(s) 738, 748, 969
FauI CCCGC 1 cut(s) 1060
Fnu4HI GCNGC 5 cut(s) 204, 778, 791, 1034, 1062
FokI GGATG 3 cut(s) 235, 304, 676
FriOI GRGCYC 1 cut(s) 738
Fsp4HI GCNGC 5 cut(s) 204, 778, 791, 1034, 1062
FspBI CTAG 1 cut(s) 810
GlaI GCGC 2 cut(s) 162, 643
GluI GCNGC 5 cut(s) 204, 778, 791, 1034, 1062
GsaI CCCAGC 1 cut(s) 857
HaeII RGCGCY 2 cut(s) 164, 645
HaeIII GGCC 4 cut(s) 131, 465, 615, 951
HapII CCGG 6 cut(s) 191, 234, 321, 411, 588, 987
HhaI GCGC 2 cut(s) 163, 644
Hin1I GRCGYC 1 cut(s) 682
Hin1II CATG 3 cut(s) 742, 752, 973
Hin6I GCGC 2 cut(s) 161, 642
HinP1I GCGC 2 cut(s) 161, 642
HindIII AAGCTT 1 cut(s) 46
HinfI GANTC 4 cut(s) 8, 324, 423, 919
HpaII CCGG 6 cut(s) 191, 234, 321, 411, 588, 987
HphI GGTGA 1 cut(s) 934
Hpy188I TCNGA 4 cut(s) 422, 454, 637, 977
Hpy188III TCNNGA 3 cut(s) 321, 439, 721
Hpy99I CGWCG 1 cut(s) 124
HpyAV CCTTC 4 cut(s) 626, 632, 883, 962
HpyCH4III ACNGT 2 cut(s) 398, 901
HpyCH4IV ACGT 1 cut(s) 682
HpyCH4V TGCA 8 cut(s) 95, 286, 476, 506, 515, 777, 790, 887
HpyF10VI GCNNNNNNNGC 8 cut(s) 200, 343, 407, 512, 539, 893, 1061, 1070
HpyF3I CTNAG 3 cut(s) 14, 402, 451
HpySE526I ACGT 1 cut(s) 682
Hsp92I GRCGYC 1 cut(s) 682
Hsp92II CATG 3 cut(s) 742, 752, 973
HspAI GCGC 2 cut(s) 161, 642
Kpn2I TCCGGA 1 cut(s) 320
KroI GCCGGC 2 cut(s) 190, 410
KroNI GCCGGC 2 cut(s) 192, 412
Kzo9I GATC 3 cut(s) 236, 495, 624
LmnI GCTCC 3 cut(s) 343, 407, 893
Lsp1109I GCAGC 3 cut(s) 789, 802, 1020
LweI GCATC 7 cut(s) 82, 104, 321, 524, 722, 898, 1000
MaeI CTAG 1 cut(s) 810
MaeII ACGT 1 cut(s) 682
MaeIII GTNAC 2 cut(s) 253, 392
MalI GATC 3 cut(s) 238, 497, 626
MboI GATC 3 cut(s) 236, 495, 624
MboII GAAGA 8 cut(s) 51, 54, 57, 60, 63, 355, 427, 928
MflI RGATCY 1 cut(s) 236
MhlI GDGCHC 4 cut(s) 233, 379, 403, 738
MluCI AATT 1 cut(s) 707
MmeI TCCRAC 2 cut(s) 156, 955
MnlI CCTC 9 cut(s) 115, 350, 554, 593, 887, 941, 966, 983, 1060
Mph1103I ATGCAT 1 cut(s) 97
MreI CGCCGGCG 1 cut(s) 190
MroI TCCGGA 1 cut(s) 320
MroNI GCCGGC 2 cut(s) 190, 410
MspA1I CMGCKG 2 cut(s) 521, 857
MspI CCGG 6 cut(s) 191, 234, 321, 411, 588, 987
MspR9I CCNGG 1 cut(s) 588
MvnI CGCG 1 cut(s) 203
MwoI GCNNNNNNNGC 8 cut(s) 200, 343, 407, 512, 539, 893, 1061, 1070
NaeI GCCGGC 2 cut(s) 192, 412
NciI CCSGG 1 cut(s) 588
NdeII GATC 3 cut(s) 236, 495, 624
NgoMIV GCCGGC 2 cut(s) 190, 410
NlaIII CATG 3 cut(s) 742, 752, 973
NlaIV GGNNCC 9 cut(s) 156, 238, 378, 409, 466, 669, 690, 979, 1051
NmuCI GTSAC 1 cut(s) 253
NsiI ATGCAT 1 cut(s) 97
NspI RCATGY 1 cut(s) 752
PceI AGGCCT 1 cut(s) 951
PcsI WCGNNNNNNNCGW 2 cut(s) 426, 717
PdiI GCCGGC 2 cut(s) 192, 412
PfeI GAWTC 4 cut(s) 8, 324, 423, 919
PkrI GCNGC 5 cut(s) 205, 779, 792, 1035, 1063
Psp124BI GAGCTC 1 cut(s) 738
PspFI CCCAGC 1 cut(s) 853
PspN4I GGNNCC 9 cut(s) 156, 238, 378, 409, 466, 669, 690, 979, 1051
PspPI GGNCC 2 cut(s) 464, 1049
PstNI CAGNNNCTG 1 cut(s) 512
PsuI RGATCY 1 cut(s) 236
PvuII CAGCTG 2 cut(s) 521, 857
RsaI GTAC 6 cut(s) 56, 185, 305, 446, 485, 743
RsaNI GTAC 6 cut(s) 55, 184, 304, 445, 484, 742
SacI GAGCTC 1 cut(s) 738
SatI GCNGC 5 cut(s) 204, 778, 791, 1034, 1062
Sau3AI GATC 3 cut(s) 236, 495, 624
Sau96I GGNCC 2 cut(s) 464, 1049
ScaI AGTACT 1 cut(s) 446
ScrFI CCNGG 1 cut(s) 588
SduI GDGCHC 4 cut(s) 233, 379, 403, 738
SfaNI GCATC 7 cut(s) 82, 104, 321, 524, 722, 898, 1000
SgrAI CRCCGGYG 1 cut(s) 190
SinI GGWCC 1 cut(s) 1049
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
Sse9I AATT 1 cut(s) 707
SseBI AGGCCT 1 cut(s) 951
SsiI CCGC 7 cut(s) 79, 203, 210, 671, 1053, 1059, 1062
SspMI CTAG 1 cut(s) 810
SstI GAGCTC 1 cut(s) 738
StuI AGGCCT 1 cut(s) 951
StyD4I CCNGG 1 cut(s) 586
StyI CCWWGG 1 cut(s) 1074
TaaI ACNGT 2 cut(s) 398, 901
TaiI ACGT 1 cut(s) 685
TaqI TCGA 4 cut(s) 140, 264, 720, 732
TasI AATT 1 cut(s) 707
TatI WGTACW 6 cut(s) 54, 183, 303, 444, 483, 741
TauI GCSGC 2 cut(s) 206, 1064
TfiI GAWTC 4 cut(s) 8, 324, 423, 919
TscAI CASTG 2 cut(s) 132, 403
TseFI GTSAC 1 cut(s) 253
TseI GCWGC 3 cut(s) 777, 790, 1033
Tsp45I GTSAC 1 cut(s) 253
TspDTI ATGAA 2 cut(s) 102, 719
TspRI CASTG 2 cut(s) 132, 403
VpaK11BI GGWCC 1 cut(s) 1049
XapI RAATTY 1 cut(s) 707
XceI RCATGY 1 cut(s) 752
XspI CTAG 1 cut(s) 810
ZraI GACGTC 1 cut(s) 683
ZrmI AGTACT 1 cut(s) 446
Zsp2I ATGCAT 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.